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1.
bioRxiv ; 2024 May 09.
Article En | MEDLINE | ID: mdl-38766019

Breast cancer brain metastases (BCBM) are a significant cause of mortality and are incurable. Thus, identifying BCBM targets that reduce morbidity and mortality is critical. BCBM upregulate Stearoyl-CoA Desaturase (SCD), an enzyme that catalyzes the synthesis of monounsaturated fatty acids, suggesting a potential metabolic vulnerability of BCBM. In this study, we tested the effect of a brain-penetrant clinical-stage inhibitor of SCD (SCDi), on breast cancer cells and mouse models of BCBM. Lipidomics, qPCR, and western blot were used to study the in vitro effects of SCDi. Single-cell RNA sequencing was used to explore the effects of SCDi on cancer and immune cells in a BCBM mouse model. Pharmacological inhibition of SCD markedly reshaped the lipidome of breast cancer cells and resulted in endoplasmic reticulum stress, DNA damage, loss of DNA damage repair, and cytotoxicity. Importantly, SCDi alone or combined with a PARP inhibitor prolonged the survival of BCBM-bearing mice. When tested in a syngeneic mouse model of BCBM, scRNAseq revealed that pharmacological inhibition of SCD enhanced antigen presentation by dendritic cells, was associated with a higher interferon signaling, increased the infiltration of cytotoxic T cells, and decreased the proportion of exhausted T cells and regulatory T cells in the tumor microenvironment (TME). Additionally, pharmacological inhibition of SCD decreased engagement of immunosuppressive pathways, including the PD-1:PD-L1/PD-L2 and PVR/TIGIT axes. These findings suggest that SCD inhibition could be an effective strategy to intrinsically reduce tumor growth and reprogram anti-tumor immunity in the brain microenvironment to treat BCBM.

2.
SAGE Open Med ; 11: 20503121231161193, 2023.
Article En | MEDLINE | ID: mdl-36993779

Objective: To evaluate whether there is an increase in vaccination rates of patients with diabetes mellitus who received guidance to update their vaccination schedules for influenza, hepatitis B, pneumonia, and tetanus. Methodology: A randomized controlled trial was conducted between December 2018 and November 2020. The sample consisted of 139 patients from the endocrinology service outpatient clinic of Santa Maria University Hospital was randomized into an intervention group (n = 68) and a control group (n = 71). The intervention consisted of a phone call to update the vaccination schedule for the diseases evaluated. Results: The mean age of the subjects was 59.17 ± 12.91 years and 62.6% were female. No age differences were observed between genders and randomization groups (p = 0.548, p = 0.791) and groups were homogeneous (p = 0.173, p = 0.443). The intervention group showed a significant increase in vaccination rates after the intervention. For influenza, 79.4-89.7% (p = 0.016); hepatitis B, 29.4-48.5% (p = 0.002); tetanus, 51.5-72.1% (p = 0.007); and pneumonia, 22.1-29.4% (p = 0.049). No significant increase was observed in control group. Conclusion: The orientation to update the vaccination schedule through telephone contact was effective in increasing vaccination rates for influenza, hepatitis B, pneumonia, and tetanus. Trial registry: RBR-92z99d2 https://ensaiosclinicos.gov.br/rg/RBR-92z99d2.

3.
Colloids Surf B Biointerfaces ; 218: 112728, 2022 Oct.
Article En | MEDLINE | ID: mdl-35969923

Nanomaterials are characterized by an extremely large surface-to-volume ratio. Extracellular Vesicles (EVs) - which have been recently recognized as the universal agent of intercellular communication, being involved in many physiological and pathological processes and interkingdom biochemical communication - are nanoparticles, but this key aspect has never been rationally addressed. Here we report the first attempt to quantify the membrane-to-lumen partition of proteins in EVs. A semi-quantitative model based on available well-established compositional and microstructural data is formulated. The model allows for the estimation of the overall protein content of an EV as well as of the partition between membrane (surface) associated and lumen (bulk) contained proteins as a function of the EV size and shape. It further identifies 180 nm as a switch diameter, below which EVs result composed of more membrane than luminal proteins. At larger diameters the partition is reversed, reaching predominance of luminal proteins (> 80 %) in large EVs (diameter > 800 nm). The model is successfully tested to analyze and describe a real preparation composed of subpopulations of small EVs (diameter < 200 nm), including exosomes and ectosomes, and large EVs including large oncosomes (diameter > 1000 nm) from human prostate cancer cells. These findings provide the basis for a better colloidal description of EV samples, might help to understand the stoichiometry of proteins in distinct EV sub-populations, and will improve the design and interpretation of experiments, including EV engineering and dosing in-vitro and in-vivo.


Cell-Derived Microparticles , Exosomes , Extracellular Vesicles , Cell Communication , Exosomes/metabolism , Extracellular Vesicles/chemistry , Humans , Male , Proteins/metabolism
4.
Int J Mol Sci ; 23(7)2022 Apr 05.
Article En | MEDLINE | ID: mdl-35409379

Gene expression is controlled by epigenetic deregulation, a hallmark of cancer. The DNA methylome of canine diffuse large B-cell lymphoma (cDLBCL), the most frequent malignancy of B-lymphocytes in dog, has recently been investigated, suggesting that aberrant hypermethylation of CpG loci is associated with gene silencing. Here, we used a multi-omics approach (DNA methylome, transcriptome and copy number variations) combined with functional in vitro assays, to identify putative tumour suppressor genes subjected to DNA methylation in cDLBCL. Using four cDLBCL primary cell cultures and CLBL-1 cells, we found that CiDEA, MAL and PCDH17, which were significantly suppressed in DLBCL samples, were hypermethylated and also responsive (at the DNA, mRNA and protein level) to pharmacological unmasking with hypomethylating drugs and histone deacetylase inhibitors. The regulatory mechanism underneath the methylation-dependent inhibition of those target genes expression was then investigated through luciferase and in vitro methylation assays. In the most responsive CpG-rich regions, an in silico analysis allowed the prediction of putative transcription factor binding sites influenced by DNA methylation. Interestingly, regulatory elements for AP2, MZF1, NF-kB, PAX5 and SP1 were commonly identified in all three genes. This study provides a foundation for characterisation and experimental validation of novel epigenetically-dysregulated pathways in cDLBCL.


DNA Copy Number Variations , DNA Methylation , Animals , Cell Line, Tumor , CpG Islands , Dogs , Gene Expression Regulation, Neoplastic , Gene Silencing , Genes, Tumor Suppressor
5.
Cancers (Basel) ; 13(22)2021 Nov 22.
Article En | MEDLINE | ID: mdl-34831007

Cancer cells shed a heterogenous mixture of extracellular vesicles (EVs), differing in both size and composition, which likely influence physiological processes in different manners. However, how cells differentially control the shedding of these EV populations is poorly understood. Here, we show that miR-1227, which is enriched in prostate cancer EVs, compared to the cell of origin, but not in EVs derived from prostate benign epithelial cells, induces the shedding of large EVs (such as large oncosomes), while inhibiting the shedding of small EVs (such as exosomes). RNA sequencing from cells stably expressing miR-1227, a modified RISCTRAP assay that stabilizes and purifies mRNA-miR-1227 complexes for RNA sequencing, and in silico target prediction tools were used to identify miR-1227 targets that may mediate this alteration in EV shedding. The COPII vesicle protein SEC23A emerged and was validated by qPCR, WBlot, and luciferase assays as a direct target of miR-1227. The inhibition of SEC23A was sufficient to induce the shedding of large EVs. These results identify a novel mechanism of EV shedding, by which the inhibition of SEC23A by miR-1227 induces a shift in EV shedding, favoring the shedding of large EV over small EV.

6.
Phys Med ; 91: 28-42, 2021 Nov.
Article En | MEDLINE | ID: mdl-34710789

PURPOSE: The assessment of low-contrast-details is a part of the quality control (QC) program in digital radiology. It generally consists of evaluating the threshold contrast (Cth) detectability details for different-sized inserts, appropriately located in dedicated QC test tools. This work aims to propose a simplified method, based on a statistical model approach for threshold contrast estimation, suitable for different modalities in digital radiology. METHODS: A home-madelow-contrast phantom, made of a central aluminium insert with a step-wedge, was assembled and tested. The reliability and robustness of the method were investigated for Mammography, Digital Radiography, Fluoroscopy and Angiography. Imageswere analysed using our dedicated software developed on Matlab®. TheCth is expressed in the same unit (mmAl) for all studied modalities. RESULTS: This method allows the collection of Cthinformation from different modalities and equipment by different vendors, and it could be used to define typical values. Results are summarized in detail. For 0.5 diameter detail, Cthresults are in the range of: 0.018-0.023 mmAl for 2D mammography and 0.26-0.34 mmAl DR images. For angiographic images, for 2.5 mm diameter detail, the Cths median values are 0.55, 0.4, 0.06, 0.12 mmAl for low dose fluoroscopy, coronary fluorography, cerebral and abdominal DSA, respectively. CONCLUSIONS: The statistical method proposed in this study gives a simple approach for Low-Contrast-Details assessment, and the typical values proposed can be implemented in a QA program for digital radiology modalities.


Mammography , Radiographic Image Enhancement , Phantoms, Imaging , Quality Control , Reproducibility of Results
7.
Toxins (Basel) ; 12(7)2020 06 29.
Article En | MEDLINE | ID: mdl-32610656

Aflatoxins, and particularly aflatoxin B1 (AFB1), are toxic mycotoxins to humans and farm animal species, resulting in acute and chronic toxicities. At present, AFB1 is still considered a global concern with negative impacts on health, the economy, and social life. In farm animals, exposure to AFB1-contaminated feed may cause several untoward effects, liver damage being one of the most devastating ones. In the present study, we assessed in vitro the transcriptional changes caused by AFB1 in a bovine fetal hepatocyte-derived cell line (BFH12). To boost the cellular response to AFB1, cells were pre-treated with the co-planar PCB 3,3',4,4',5-pentachlorobiphenyl (PCB126), a known aryl hydrocarbon receptor agonist. Three experimental groups were considered: cells exposed to the vehicle only, to PCB126, and to PCB126 and AFB1. A total of nine RNA-seq libraries (three replicates/group) were constructed and sequenced. The differential expression analysis showed that PCB126 induced only small transcriptional changes. On the contrary, AFB1 deeply affected the cell transcriptome, the majority of significant genes being associated with cancer, cellular damage and apoptosis, inflammation, bioactivation, and detoxification pathways. Investigating mRNA perturbations induced by AFB1 in cattle BFH12 cells will help us to better understand AFB1 toxicodynamics in this susceptible and economically important food-producing species.


Aflatoxin B1/toxicity , Hepatocytes/drug effects , Liver/drug effects , Transcriptome/drug effects , Animals , Cattle , Cell Line , Gene Expression Profiling , Hepatocytes/metabolism , Liver/metabolism , Polychlorinated Biphenyls/toxicity , Signal Transduction
8.
Medisur ; 18(2): 195-202, mar.-abr. 2020. tab
Article Es | LILACS-Express | LILACS | ID: biblio-1125195

RESUMEN Fundamento: El dormir adecuadamente es una necesidad fisiológica de primer orden. Cuestiones tan cotidianas como la carga académica, tareas domésticas, o el trabajo nocturno, contribuyen a que algunos se priven de las horas de sueño recomendadas, y ello trae consecuencias para la salud, el estado anímico, y la inteligencia emocional. Objetivo: describir la relación entre la somnolencia diurna y la inteligencia emocional en estudiantes universitarios. Métodos: estudio descriptivo, correlacional, con 140 alumnos del sexto al décimo ciclo de la carrera de Terapia Física y Rehabilitación, en la Universidad Norbert Wiener, Lima, Perú. Se aplicó la escala de somnolencia de Epworth para evaluar la somnolencia diurna, y la Trait Meta Mood Scale para inteligencia emocional. Mediante la prueba estadística Rho de Spearman, se evaluó la correlación entre variables. Resultados: la edad media de los estudiantes fue 25,73 ± 4,2 años, y un promedio de horas de sueño de 5,86±1,28. El valor medio de somnolencia diurna fue 9,95±3,6; esta fue ligera en la mayoría de los casos (69,65 %). La inteligencia emocional presentó un valor medio de 78,66±13,08, y fue el factor reparación el de mayor puntuación (28,36±5,63), seguido de la claridad (25,91±5,58) y la atención (24,38±5,50). Se observó una correlación negativa débil entre la somnolencia diurna y la inteligencia emocional (p= 0,058). Conclusión: la somnolencia diurna tiene consecuencias en el comportamiento de las reacciones comprendidas por la inteligencia emocional. Los estudiantes universitarios de Terapia Física y Rehabilitación analizados se caracterizan fundamentalmente por presentar somnolencia diurna ligera e inteligencia emocional adecuada.


ABSTRACT Foundation: Adequate sleep is a physiological necessity of the first order. Issues as daily as academic load, housework, or night work, contribute to some depriving themselves of recommended sleep hours, and this brings consequences for health, mood, and emotional intelligence. Objective: to describe the relationship between daytime sleepiness and emotional intelligence in university students. Methods: descriptive, correlational study, with 140 students from the sixth to the tenth cycle of the Physical Therapy and Rehabilitation degree, at Norbert Wiener University, Lima, Peru. Epworth's sleepiness scale was applied to assess daytime sleepiness, and the Trait Meta Mood Scale for emotional intelligence. By means of Spearman's Rho statistical test, the correlation between variables was evaluated. Results: the students´ average age was 25.73 ± 4.2 years, and an average time hours of sleep was 5.86 ± 1.28 hours. The mean value of daytime sleepiness was 9.95 ± 3.6; This was mild in most cases (69.65%). Emotional intelligence had an average value of 78.66 ± 13.08, and the repair factor was the highest score (28.36 ± 5.63), followed by clarity (25.91 ± 5.58) and attention (24.38 ± 5.50). A weak negative correlation was observed between daytime sleepiness and emotional intelligence (p = 0.058). Conclusion: daytime sleepiness has consequences on the behavior of reactions comprised by emotional intelligence. The analyzed University Physical Therapy and Rehabilitation students are mainly characterized by mild daytime sleepiness and adequate emotional intelligence.

9.
Sci Rep ; 9(1): 19672, 2019 12 23.
Article En | MEDLINE | ID: mdl-31873175

Cytochrome P450 3A is the most important CYP subfamily in humans, and CYP3A4/CYP3A5 genetic variants contribute to inter-individual variability in drug metabolism. However, no information is available for bovine CYP3A (bCYP3A). Here we described bCYP3A missense single nucleotide variants (SNVs) and evaluated their functional effects. CYP3A28, CYP3A38 and CYP3A48 missense SNVs were identified in 300 bulls of Piedmontese breed through targeted sequencing. Wild-type and mutant bCYP3A cDNAs were cloned and expressed in V79 cells. CYP3A-dependent oxidative metabolism of testosterone (TST) and nifedipine (NIF) was assessed by LC-MS/MS. Finally, SNVs functional impact on TST hydroxylation was measured ex vivo in liver microsomes from individually genotyped animals. Thirteen missense SNVs were identified and validated. Five variants showed differences in CYP3A catalytic activity: three CYP3A28 SNVs reduced TST 6ß-hydroxylation; one CYP3A38 variant increased TST 16ß-hydroxylation, while a CYP3A48 SNV showed enhanced NIF oxidation. Individuals homozygous for rs384467435 SNV showed a reduced TST 6ß-hydroxylation. Molecular modelling showed that most of SNVs were distal to CYP3A active site, suggesting indirect effects on the catalytic activity. Collectively, these findings demonstrate the importance of pharmacogenetics studies in veterinary species and suggest bCYP3A genotype variation might affect the fate of xenobiotics in food-producing species such as cattle.


Cattle/genetics , Cattle/metabolism , Cytochrome P-450 CYP3A/genetics , Cytochrome P-450 CYP3A/metabolism , Mutation, Missense , Polymorphism, Single Nucleotide , Animals , Catalytic Domain/genetics , Cell Line , Cricetulus , Cytochrome P-450 CYP3A/chemistry , Gene Frequency , Male , Microsomes, Liver/metabolism , Models, Molecular , Molecular Docking Simulation , Multigene Family , Nifedipine/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Testosterone/metabolism
10.
PLoS One ; 14(3): e0214338, 2019.
Article En | MEDLINE | ID: mdl-30908543

The regulation of cytochrome P450 3A (CYP3A) enzymes is established in humans, but molecular mechanisms of its basal and xenobiotic-mediated regulation in cattle are still unknown. Here, ~10 kbp of the bovine CYP3A28 gene promoter were cloned and sequenced, and putative transcription factor binding sites were predicted. The CYP3A28 proximal promoter (PP; -284/+71 bp) contained DNA elements conserved among species. Co-transfection of bovine nuclear receptors (NRs) pregnane X and constitutive androstane receptor (bPXR and bCAR) with various CYP3A28 promoter constructs into hepatoma cell lines identified two main regions, the PP and the distal fragment F3 (-6899/-4937 bp), that were responsive to bPXR (both) and bCAR (F3 fragment only). Site-directed mutagenesis and deletion of NR motif ER6, hepatocyte nuclear factor 1 (HNF-1) and HNF-4 binding sites in the PP suggested either the involvement of ER6 element in bPXR-mediated activation or the cooperation between bPXR and liver-enriched transcription factors (LETFs) in PP transactivation. A putative DR5 element within the F3 fragment was involved in bCAR-mediated PP+F3 transactivation. Although DNA enrichment by anti-human NR antibodies was quite low, ChIP investigations in control and RU486-treated BFH12 cells, suggested that retinoid X receptor α (RXRα) bound to ER6 and DR5 motifs and its recruitment was enhanced by RU486 treatment. The DR5 element seemed to be recognized mainly by bCAR, while no clear-cut results were obtained for bPXR. Present results point to species-differences in CYP3A regulation and the complexity of bovine CYP3A28 regulatory elements, but further confirmatory studies are needed.


Cloning, Molecular/methods , Cytochrome P-450 CYP3A/genetics , Pregnane X Receptor/genetics , Receptors, Cytoplasmic and Nuclear/genetics , Animals , Binding Sites , Cattle , Cell Line, Tumor , Constitutive Androstane Receptor , Cytochrome P-450 CYP3A/chemistry , Cytochrome P-450 CYP3A/metabolism , Gene Expression Regulation , Hep G2 Cells , Humans , Promoter Regions, Genetic , Sequence Analysis, DNA , Transcription Factors/metabolism , Transfection
11.
J Pharmacol Exp Ther ; 367(3): 461-472, 2018 12.
Article En | MEDLINE | ID: mdl-30275152

G-quadruplexes (G4) are nucleic acid secondary structures frequently assumed by G-rich sequences located mostly at telomeres and proto-oncogenes promoters. Recently, we identified, in canine KIT (v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog) promoter, two G-rich sequences able to fold into G4: d_kit1 and d_kit2_A16. In this study, an anthraquinone (AQ1) and an anthracene derivative (AN6), known to stabilize the G4 structures of the corresponding human h_kit1 and h_kit2, were tested on the canine G4 and in two canine mast cell tumor (MCT) cell lines (C2 and NI-1) to verify their capability to down-regulate KIT expression. The cytotoxicity of AQ1 and AN6 was determined using the Alamar Blue test; also the constitutive expression of KIT and other proto-oncogenes containing G4 structures in their promoter (BCL2, VEGFα, VEGFR2, KRAS, and TERT) was assessed by quantitative real-time polymerase chain reaction (qRT-PCR). Then the time- and dose-dependent effects of both ligands on target gene expression were assessed by qRT-PCR. All target genes were constitutively expressed up to 96 hours of culture. Both ligands decreased KIT mRNA levels and c-kit protein amount, and AN6 was comparatively fairly more effective. DNA interaction studies and a dual-luciferase gene reporter assay performed on a noncancerous canine cell line (Madin-Darby Canine Kidney cells) proved that this down-regulation was the result of the interaction of AN6 with KIT proximal promoter. Interestingly, our results only partially overlap with those previously obtained in human cell lines, where AQ1 was found as the most effective compound. These preliminary data might suggest AN6 as a promising candidate for the selective targeting of canine KIT-dependent tumors.


DNA/genetics , G-Quadruplexes/drug effects , Promoter Regions, Genetic/drug effects , Proto-Oncogene Proteins c-kit/genetics , Animals , Anthracenes/pharmacology , Anthraquinones/pharmacology , Cell Line , Dog Diseases/drug therapy , Dog Diseases/genetics , Dogs , Down-Regulation/drug effects , Down-Regulation/genetics , Gene Expression/drug effects , Gene Expression/genetics , Ligands , Madin Darby Canine Kidney Cells , Oncogenes/genetics , Promoter Regions, Genetic/genetics , RNA, Messenger/genetics
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