Your browser doesn't support javascript.
loading
: 20 | 50 | 100
1 - 20 de 33
1.
J Hazard Mater ; 472: 134448, 2024 Jul 05.
Article En | MEDLINE | ID: mdl-38728862

Microplastics (MPs) are a major concern in marine ecosystem because MPs are persistent and ubiquitous in oceans and are easily consumed by marine biota. Although many studies have reported the toxicity of MPs to marine biota, the toxicity of environmentally relevant types of MPs is little understood. We investigated the toxic effects of fragmented polyethylene terephthalate (PET) MP, one of the most abundant MPs in the ocean, on the marine rotifer Brachionus koreanus at the individual and molecular level. No significant rotifer mortality was observed after exposure to PET MPs for 24 and 48 h. The ingestion and egestion assays showed that rotifers readily ingested PET MPs in the absence of food but not when food was supplied; thus, there were also no chronic effects of PET MPs. In contrast, intracellular reactive oxygen species levels and glutathione S-transferase activity in rotifers were significantly increased by PET MPs. Transcriptomic and metabolomic analyses revealed that genes and metabolites related to energy metabolism and immune processes were significantly affected by PET MPs in a concentration-dependent manner. Although acute toxicity of PET MPs was not observed, PET MPs are potentially toxic to the antioxidant system, immune system, and energy metabolism in rotifers.


Microplastics , Polyethylene Terephthalates , Reactive Oxygen Species , Rotifera , Water Pollutants, Chemical , Animals , Rotifera/drug effects , Polyethylene Terephthalates/toxicity , Microplastics/toxicity , Water Pollutants, Chemical/toxicity , Reactive Oxygen Species/metabolism , Glutathione Transferase/metabolism , Glutathione Transferase/genetics , Toxicity Tests , Transcriptome/drug effects , Metabolomics , Eating , Multiomics
2.
Mycobiology ; 52(1): 68-84, 2024.
Article En | MEDLINE | ID: mdl-38415173

A rapid decline of Abies koreana has been reported in most of the natural alpine habitats in Korea. It is generally accepted that this phenomenon is due to climate change even though no clear conclusions have been drawn. Most research has focused on abiotic environmental factors, but studies on the relationships between A. koreana and soil fungal microbiomes are scarce. In this study, the rhizoplane and rhizosphere fungal communities in the alive and dead Korean fir trees from its three major natural habitats including Mt. Deogyu, Mt. Halla, and Mt. Jiri in Korea were investigated to identify specific soil fungal groups closely associated with A. koreana. Soil fungal diversity in each study site was significantly different from another based on the beta diversity calculations. Heat tree analysis at the genus level showed that Clavulina, Beauveria, and Tomentella were most abundant in the healthy trees probably by forming ectomycorrhizae with Korean fir growth and controlling pests and diseases. However, Calocera, Dacrymyces, Gyoerffyella, Hydnotrya, Microdochium, Hyaloscypha, Mycosymbioces, and Podospora were abundant in the dead trees. Our findings suggested that Clavulina, Beauveria, and Tomentella are the major players that could be considered in future reforestation programs to establish ectomycorrhizal networks and promote growth. These genera may have played a significant role in the survival and growth of A. koreana in its natural habitats. In particular, the genus Gyoerffyella may account for the death of the seedlings. Our work presented exploratory research on the specific fungal taxa associated with the status of A. koreana.

3.
J Hazard Mater ; 465: 133196, 2024 Mar 05.
Article En | MEDLINE | ID: mdl-38141299

Biological early warning system (BEWS) has been globally used for surface water quality monitoring. Despite its extensive use, BEWS has exhibited limitations, including difficulties in biological interpretation and low alarm reproducibility. This study addressed these issues by applying machine learning (ML) models to eight years of in-situ BEWS data for Daphnia magna. Six ML models were adopted to predict contamination alarms from Daphnia behavioral parameters. The light gradient boosting machine model demonstrated the most significant improvement in predicting alarms from Daphnia behaviors. Compared with the traditional BEWS alarm index, the ML model enhanced the precision and recall by 29.50% and 43.41%, respectively. The speed distribution index and swimming speed were significant parameters for predicting water quality warnings. The nonlinear relationships between the monitored Daphnia behaviors and water physicochemical water quality parameters (i.e., flow rate, Chlorophyll-a concentration, water temperature, and conductivity) were identified by ML models for simulating Daphnia behavior based on the water contaminants. These findings suggest that ML models have the potential to establish a robust framework for advancing the predictive capabilities of BEWS, providing a promising avenue for real-time and accurate assessment of water quality. Thereby, it can contribute to more proactive and effective water quality management strategies.


Water Pollutants, Chemical , Water Quality , Animals , Daphnia magna , Reproducibility of Results , Swimming , Daphnia , Water Pollutants, Chemical/pharmacology
5.
Chemosphere ; 319: 137989, 2023 Apr.
Article En | MEDLINE | ID: mdl-36736481

Chlorine (Cl2) is a disinfectant often used in swimming pools and water treatment facilities. However, it is released into aquatic ecosystems, where it may harm non-targeted organisms. Here, we performed a mesocosm experiment exposing Zacco platypus (Z. platypus) to biocide Cl2 for 30 days (30 d) at two days' time points 15 days (15 d) and 30 d samples were collected. Here, Z. platypus was exposed to a sublethal concentration (0.1 mg/L) of Cl2, and comparative transcriptomics analyses were performed to determine their response mechanisms at the molecular level. According to RNA sequencing of the whole-body transcriptome, 860 and 1189 differentially expressed genes (DEGs) were identified from the 15 d and 30 d responses to Cl2, respectively. After enrichment analysis of GO (Gene Ontology) functions and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways, identified DEGs were demonstrated to be associated with a variety of functions, including "ion binding and transmembrane transporters". Cl2 also induced oxidative stress in Z. platypus by increasing the levels of reactive oxygen species (ROS) while decreasing the catalase (CAT) content and the levels of solute carrier family 22 member 11 (slc22a11), Caspase-8 (casp-8), inducible nitric oxide synthase (NOS2), cytosolic phospholipase A2 gamma (PLA2G4). However, Z. platypus still allows recovery during stress suspension by increasing the expression levels of solute carrier family proteins. The GO and KEGG annotation results revealed that the expression of DEGs were related to the detoxification process, immune response, and antioxidant mechanism. Additionally, protein-protein interaction networks (PPI) and cytoHubba analyses identified sixteen hub genes and their interaction. These findings elucidate the regulation of various DEGs and signaling pathways in response to Cl2 exposure, which will improve our knowledge and laid foundation for further investigation of the toxicity of Cl2 to Z. platypus.


Disinfectants , Platypus , Animals , Transcriptome , Chlorine/toxicity , Disinfectants/toxicity , Ecosystem , Gene Expression Profiling/methods , Computational Biology/methods
6.
Environ Geochem Health ; 45(9): 6807-6822, 2023 Sep.
Article En | MEDLINE | ID: mdl-36445536

Owing to their widespread distribution and high bioaccumulation, microplastics (MPs) and mercury (Hg) are considered major threats to the ocean. MP interacts with Hg because of its high adsorption properties. However, their toxicological interactions with marine organisms, especially combined effects at the molecular level, are poorly understood. This study investigated the single and combined effects of MP and Hg on the metabolic profile of the brackish water flea Diaphanosoma celebensis. A total of 238 metabolites were significantly affected by MP, Hg, or MP + Hg. Metabolite perturbation patterns showed that toxicity of Hg and MP + Hg was similar and that of MP was not significant. Among the 223 metabolites affected by Hg, profiles of 32 unannotated metabolites were significantly different from those of MP + Hg, and combined effects of MP + Hg decreased the effect of Hg on 25 of these metabolites. Only 11 annotated metabolites were significantly affected by Hg or MP + Hg and were related to carbohydrate, lipid, vitamin, and ecdysteroid metabolism. Ten metabolites were decreased by Hg and MP + Hg and were not significantly different between the exposure groups. Enrichment analysis showed that galactose, starch, and sucrose metabolism were the most affected pathways. These findings suggest that MP has negligible toxic effect, and Hg can induce energy depletion, membrane damage, and disruption of growth, development, and reproduction. Although the impact of MP was negligible, the combined effects of MP + Hg could be metabolite specific. This study provides better understanding of the combined effects of MP and Hg on marine organisms.


Cladocera , Mercury , Methylmercury Compounds , Water Pollutants, Chemical , Animals , Aquatic Organisms , Mercury/analysis , Mercury/toxicity , Methylmercury Compounds/toxicity , Microplastics/toxicity , Plastics , Saline Waters , Water Pollutants, Chemical/toxicity , Water Pollutants, Chemical/analysis
7.
Heliyon ; 8(10): e11096, 2022 Oct.
Article En | MEDLINE | ID: mdl-36281403

In biological wastewater treatment, the oxygen supply in an aeration tank is the most important factor for removing organic pollutants, but it takes a large amount of electricity to generate the oxygen supply required. The Jetventurimixer (JVM) is a device that applies Bernoulli's principle, and the difference in flow rate pressure through the impeller is generated by the rotational force. Due to this physical mechanism, this device can supply oxygen in the atmosphere to the bioreactor without additional power. In this study, the JVM-based aeration process was developed for more efficient water treatment that demands lower energy. Parameters were measured for validating the efficiency and lower power demands, including the oxygen mass transfer characteristics and power efficiency. The results indicated that all parameters related to the oxygen mass transfer characteristics were advanced in performance by more than 200 % compared to those of the conventional air diffuser. In the case of power efficiency, it was confirmed that performance was 153-176 % higher. Therefore, it was confirmed that the JVM provides high-efficiency and low-energy benefits to the aeration process and, based on these advantages, the developed system seems to require further studies and validation for application to the water treatment system.

8.
Aquat Toxicol ; 249: 106233, 2022 Aug.
Article En | MEDLINE | ID: mdl-35779485

As urbanization and the global population increases, pollutants associated with municipal wastewater such as pharmaceuticals are becoming more prevalent in aquatic environments. Acetaminophen (paracetamol) is a widely used drug worldwide and one of the most frequently detected pharmaceuticals in freshwater ecosystems. This study investigated the impact of acetaminophen on the metabolite profile of Daphnia magna at two life stages; and used these metabolomic findings to hypothesize a potential impact at a higher organismal level which was subsequently tested experimentally. Targeted polar metabolite analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS) was used to measure changes in the concentration of 51 metabolites in the neonate (> 24 h old) and adult (8 day-old) daphnids following a 48-h exposure to sub-lethal concentrations of acetaminophen. The impact of acetaminophen on the metabolic profile of neonates was widely different from adults. Also, acetaminophen exposure perturbed the abundance of nucleotides more extensively than other metabolites. The acute metabolomic experimental results led to the hypotheses that exposure to sub-lethal concentrations of acetaminophen upregulates protein synthesis in D. magna and subsequently increases growth during early life stages and has an opposite impact on adults. Accordingly, a 10 day growth rate experiment indicated that exposure to acetaminophen elevated biomass production in neonates but not in adults. These novel findings demonstrate that a targeted analysis and interpretation of the changes in the polar metabolic profile of organisms in response to environmental stressors could be used as a tool to predict changes at higher biological levels. As such, this study further emphasizes the incorporation of molecular-level platforms as critical and robust tools in environmental assessment frameworks and biomonitoring of aquatic ecosystems.


Daphnia , Water Pollutants, Chemical , Acetaminophen/metabolism , Acetaminophen/toxicity , Animals , Chromatography, Liquid , Daphnia/metabolism , Ecosystem , Pharmaceutical Preparations/metabolism , Tandem Mass Spectrometry , Water Pollutants, Chemical/toxicity
9.
Toxics ; 10(5)2022 May 12.
Article En | MEDLINE | ID: mdl-35622658

Oil-contaminated soil is a major societal problem for humans and the environment. In this study, the pyrolysis method was applied to oil-contaminated soil used as a landfill and gas station site in Korea. The removal efficiency of the main components of oil-contaminated soils, such as total petroleum hydrocarbons (TPH), polyaromatic hydrocarbons (PAHs), unresolved complex mixture (UCM), and alkylated PAHs (Alk-PAHs) were measured, and the effect of temperature, treatment time, and moisture content on pyrolysis efficiency was studied. In order to evaluate the risk of soil from which pollutants were removed through pyrolysis, integrated ecotoxicity was evaluated using Daphnia magna and Allivibrio fischeri. The chemical and biological measurements in this study include contaminants of emerging concerns (CECs). Results showed that the pyrolysis was more efficient with higher treatment temperatures, moisture content, and treatment times. In addition, toxicity was reduced by 99% after pyrolysis, and the degree of toxicity was evaluated more sensitively in Allivibrio fischeri than in Daphnia magna. This study shows that weathered oil-contaminated soil can be effectively treated in a relatively short time through pyrolysis, as well as provides information on efficient conditions and the assessment of ecotoxicity.

10.
ACS Omega ; 6(43): 29171-29183, 2021 Nov 02.
Article En | MEDLINE | ID: mdl-34746606

Biomass can be upgraded via torrefaction, and torrefied kenaf (TK) is a fuel that allows blending with coal at high ratios. In the present study, raw kenaf (Hibiscus cannabinus L.) (RK) was torrefied at 523 K for 30 min and then mixed with Vietnamese anthracite (NinhBinh, NB) before co-pyrolysis. Thermogravimetric (TG) analysis was used to evaluate the behavior of RK, TK, and blended RK/TK during co-pyrolysis at biomass blending ratios (BBRs) of 0, 25, 50, 75, and 100 wt %. The TG and derivative thermogravimetry curves of a mixture of NB and RK (NBRK) were similar to those of RK. The decomposition curves of a mixture of NB and TK (NBTK) depended on the mass fraction of TK. Based on weight loss differences between the experimental and calculated data for the fuel blends, no interaction between the RK and anthracite was observed for all BBRs, whereas anthracite involving 50 and 75% TK exhibited synergistic effects. The temperature range for synergy and degree of synergy for NB and TK depended on the heating rate and mass ratio of TK. Kinetic parameters were calculated using the Friedman-non-isothermal free kinetic method at heating rates of 10, 20, and 40 K/min. The results showed that the activation energy (E) values of the NBRK at conversion ratios of 0.2-0.5 were equal to those of the RK, whereas they were superior at NB decomposition ratios of 0.6-0.8. NBTK1-1 (BBR of 50%) showed E values higher than those of NB at some conversion ratios, thus demonstrating a negative impact of blending. Further, NBTK1-3 (BBR of 75%) and NBTK3-1 (BBR of 25%) exhibited E values between those of NB and TK. The present study suggests that a high TK mass fraction (75%) in the blend for co-pyrolysis is optimal for the activation energy and volatile matter yield.

11.
Sci Total Environ ; 794: 148771, 2021 Nov 10.
Article En | MEDLINE | ID: mdl-34225144

Daphnia magna is an important organism for exposure studies in ecotoxicology. Body length measurement of a daphnid is a useful endpoint that represents the adverse effects of exposed chemicals or conditions on growth. This study questioned whether stress on body length measurement conditions while maintaining Daphnia magna on a slide glass results in any impact to antioxidant enzyme activity or growth. At the same time, the shed carapace length was tested to see if it could predict body length and be used as an alternative endpoint. The measured catalase (CAT) activity decreased as the exposure time to the on-slide conditions increased from 30 s to 120 s, although glutathione-S-transferase (GST) activity was not affected. On the other hand, regression between body length and two parameters of shed carapace length showed R2 values, 0.869 and 0.924. Growth measured for each molting for three weeks was not affected by the exposure to the on-slide conditions. Finally, this study confirmed potential oxidative stress based on the exposure time dependent CAT activity in Daphnia magna under microscopic observation. More importantly, the shed carapace length was validated to reflect body length and it implies applicability of the new parameters to sublethal effect measurement using Daphnia magna. This study suggests potential interference is possible with the traditional growth measurement method on antioxidant enzyme activity in Daphnia magna and proposes better experimental practices to avoid the interference.


Daphnia , Water Pollutants, Chemical , Animal Shells , Animals , Antioxidants , Oxidation-Reduction , Oxidative Stress , Water Pollutants, Chemical/toxicity
12.
Environ Sci Technol ; 55(6): 3845-3854, 2021 03 16.
Article En | MEDLINE | ID: mdl-33617259

Endocrine disruption is intimately linked to controlling the population of pollutant-exposed organisms through reproduction and development dysregulation. This study investigated how endocrine disruption in a predator organism could affect prey species biology through infochemical communication. Daphnia magna and Chlorella vulgaris were chosen as model prey and predator planktons, respectively, and fenoxycarb was used for disrupting the endocrine system of D. magna. Hormones as well as endo- and exometabolomes were extracted from daphnids and algal cells and their culture media and analyzed using liquid chromatography with tandem mass spectrometry. Biomolecular perturbations of D. magna under impaired offspring production and hormone dysregulation were observed. Differential biomolecular responses of the prey C. vulgaris, indicating changes in methylation and infochemical communication, were subsequently observed under the exposure to predator culture media, containing infochemicals released from the reproducibly normal and abnormal D. magna, as results of fenoxycarb exposure. The observed cross-species transfer of the endocrine disruption consequences, initiated from D. magna, and mediated through infochemical communication, demonstrates a novel discovery and emphasizes the broader ecological risk of endocrine disruptors beyond reproduction disruption in target organisms.


Chlorella vulgaris , Endocrine Disruptors , Water Pollutants, Chemical , Animals , Daphnia , Endocrine Disruptors/toxicity , Reproduction , Water Pollutants, Chemical/toxicity , Zooplankton
13.
Water Res ; 184: 116107, 2020 Oct 01.
Article En | MEDLINE | ID: mdl-32717493

Rapid biomolecular observation in model indicator organisms has been considered as a potential predictor of water pollution from chronic and trace toxicants. This study evaluated the use of Daphnia magna metabolomic measurements as indicators for exposure to reproductive endocrine disruptors by using the model juvenile hormone analogue fenoxycarb. Because D. magna reproduction controls metabolic regulation, the reproduction stage was also carefully considered in metabolic observations and data analysis to examine differences. Comparisons of metabolite abundance regulation between 1 and 12 days of fenoxycarb exposure were performed to investigate the predictability of the sub-chronic (12 days) adverse impacts on reproduction and metabolic regulation based on acute (1 day) metabolic observations. ANOVA-simultaneous component analysis (ASCA) detected reversed patterns in direction of time-course metabolite abundance regulation with fenoxycarb exposure. For example, decreases in the abundances of leucine, asparagine, methionine, and isoleucine which then changed to increases were observed with time during fenoxycarb exposures. The reversed regulation pattern was observed at the last reproduction stage (stage 3), exclusively. Pearson correlation analysis showed that correlations of pairwise metabolites were disrupted with fenoxycarb exposure. Similar to ASCA, data normalization based on the reproduction stage improved the detectability of significant correlations. The disruption on ambient metabolite regulation patterns and pairwise metabolite correlations was consistently observed with both 1 and 12 days of fenoxycarb exposures for sets of select metabolites. The observed regulatory disruptions to these specific metabolites suggest altered oogenesis as the affected metabolites and the specific reproduction stage are related to successful oogenesis. This study demonstrates that D. magna metabolic dysregulation is a predictor of water contamination by endocrine disrupting compounds. The high predictability of sub-chronic (12 days) endocrine disruption was confirmed based on acute (1 day) metabolic observations. Furthermore, integration of the reproduction cycle information in D. magna metabolomics was validated by observing a reproduction stage specific dysregulation in metabolite abundance regulation, which was not observable from the broader data analysis. Consequently, this study confirms the potential for establishing a quantitative relationship between water quality and indicator species metabolic observations. Additionally, it was found that constraining variables relevant to toxicity mechanisms of interest, such as the reproduction stage, is a key consideration for extraction of ecologically meaningful information in environmental metabolomics.


Endocrine Disruptors , Water Pollutants, Chemical , Animals , Daphnia , Endocrine Disruptors/toxicity , Juvenile Hormones , Reproduction , Water Pollutants, Chemical/toxicity , Water Quality
14.
Anal Chem ; 92(14): 9856-9865, 2020 07 21.
Article En | MEDLINE | ID: mdl-32551506

In vivo nuclear magnetic resonance (NMR) is a powerful analytical tool for probing complex biological processes inside living organisms. However, due to magnetic susceptibility broadening, which produces broad lines in one-dimensional NMR, 1H-13C two-dimensional (2D) NMR is required for metabolite monitoring in vivo. As each 2D experiment is time-consuming, often hours, this limits the temporal resolution over which in vivo processes can be monitored. Furthermore, to understand concentration-dependent responses, studies are traditionally repeated using different contaminant and toxin concentrations, which can make studies prohibitively long (potentially months). In this study, time-resolved non-uniform sampling NMR is performed in the presence of a contaminant concentration sweep. The result is that the lowest concentration that elicits a metabolic response can be rapidly detected, while the metabolic pathways impacted provide information about the toxic mode of action of the toxin. The lowest concentration of bisphenol A (BPA) that induces a response was ∼0.1 mg/L (detected in just 16 min), while changes in different metabolites suggest a complex multipathway response that leads to protein degradation at higher BPA concentrations. This proof of concept shows it is possible, on the basis of "real-time" organism responses, to identify the sublethal concentration at which a toxin impacts an organism and thus represents an essential analytical tool for the next generation of toxicity-based research and monitoring.


Benzhydryl Compounds/toxicity , Daphnia/drug effects , Decapoda/drug effects , Magnetic Resonance Imaging/methods , Phenols/toxicity , Animals , Benzhydryl Compounds/administration & dosage , Dose-Response Relationship, Drug , Estrogens, Non-Steroidal/administration & dosage , Estrogens, Non-Steroidal/toxicity , Phenols/administration & dosage
15.
Article En | MEDLINE | ID: mdl-32505104

Perfluorooctane sulfonate (PFOS) is a persistent pollutant which is potentially harmful and bioaccumulative to aquatic organisms. To evaluate the regulatory alteration of select metabolites with PFOS exposure at early and typical acute exposure periods in an aquatic indicator species Daphnia magna, the hourly abundance of the twenty-three metabolites was investigated over 24 h. To evaluate the bioaccumulation potential of PFOS at a sub-lethal concentration in D. magna, the daily accumulation into D. magna for 16 days was also evaluated. Twenty-three targeted metabolites were quantified over 1 to 4 h and 21 to 24 h of PFOS exposure using liquid chromatography tandem mass spectrometry (LC-MS/MS). Daphnid to water PFOS concentration ratios were monitored separately over different days and life stages at 0 to 76 h and 2 to 16 days of PFOS exposure. The observed metabolite abundance and bioaccumulation in the exposed groups was compared between sampling times. The results reveal that sub-lethal PFOS exposure at 2 mg/L and 20 mg/L alters regulation of arginine, tyrosine and adenosine monophosphate which are directly and indirectly related to energy status. The temporal metabolic responses observed for the early exposure period (4 h), but not for the typical acute exposure period (24 h), suggest the dysregulation potency of PFOS on metabolite regulation of D. magna and the importance of early time-course monitoring approaches. Sixteen days of bioaccumulation monitoring showed that PFOS is more bioaccumulative in younger D. magna. The observation of time-dependent bioaccumulation of PFOS in D. magna requires further studies to define its precise mechanism. Interestingly, the bioaccumulation potential of PFOS was found to be consistent between 72 h and 16 day exposure periods. No difference on the body burden to water concentration ratio during about one third of the life span time (16 days), compared to the 72 h exposure, suggests that the prolonged exposure did not increase the bioaccumulation of PFOS in D. magna. This study demonstrates that the Daphnia metabolites are rapidly responding to sub-lethal PFOS exposure and provides information on life stage and time-dependent bioaccumulation potential of PFOS. As such, metabolite regulation is a sensitive indicator to sub-lethal PFOS exposure and can be informative when combined with other measures of toxicity.


Alkanesulfonic Acids/metabolism , Daphnia/metabolism , Fluorocarbons/metabolism , Water Pollutants, Chemical/metabolism , Animals , Bioaccumulation , Chromatography, Liquid , Daphnia/growth & development , Female , Tandem Mass Spectrometry
16.
Anal Chem ; 91(23): 15000-15008, 2019 12 03.
Article En | MEDLINE | ID: mdl-31670507

In vivo nuclear magnetic resonance (NMR) is rapidly evolving as a critical tool as it offers real-time metabolic information, which is crucial for delineating complex toxic response pathways in living systems. Organisms such as Daphnia magna (water fleas) and Hyalella azteca (freshwater shrimps) are commonly 13C-enriched to increase the signal in NMR experiments. A key goal of in vivo NMR is to monitor how molecules (nutrients, contaminants, or drugs) are metabolized. Conventionally, these studies would normally involve using a 13C-enriched probe molecule and feeding this to an organism at natural abundance, in turn allowing the fate of the probe molecule to be selectively analyzed. The drawback of such an approach is that there is a limited range of 13C-enriched probe molecules, and if available, they are extremely cost prohibitive. Uniquely, when utilizing 13C organisms, a reverse strategy of isotopic filtering becomes possible. The concept described here uses 1H detection in combination with a 13C filter on living organisms. The purpose is to suppress all 1H signals from the organism (i.e., 1H attached to 13C), leaving only the probe molecule (1H attached to 12C). Because the probe molecule can be selectively observed using this approach, it then makes it possible to follow and discern processes such as bioconversion, bioaccumulation, and excretion in vivo. As the approach uses 1H detection, it provides excellent detection limits in the nanogram range. In this article, the approach is introduced, optimized on standards, and then applied to follow nicotine biotransformation and lipid assimilation in vivo to demonstrate the concept.


Magnetic Resonance Spectroscopy/methods , Metabolomics/methods , Animals , Biotransformation , Carbon-13 Magnetic Resonance Spectroscopy/methods , Daphnia/metabolism , Decapoda/metabolism , Lipid Mobilization , Nicotine/pharmacokinetics , Proton Magnetic Resonance Spectroscopy/methods
17.
Environ Sci Technol ; 53(21): 12764-12773, 2019 Nov 05.
Article En | MEDLINE | ID: mdl-31553582

Daphnia magna is a keystone indicator zooplankton used in environmental quality assessments. Comparative metabolomics, which contrasts small biomolecular regulations under different conditions, has emerged as a sensitive and informative investigation tool for the assessment of environmental stressors on D. magna. Baseline metabolomic variation is likely impacted by the asexual reproduction cycle of D. magna; however, the relationship between metabolite concentration regulation and reproduction cycle has not been investigated. This study investigated the time-course regulation of 51 metabolites during different reproduction stages to determine how the reproduction cycle controlled the metabolite profile of D. magna. Two-way analysis of variance (ANOVA) results reveal that most metabolites show significantly differentiated concentrations by individual or a combination of reproduction stages and sampling time. On the basis of the partial least-squares-discriminant analysis (PLS-DA) and ANOVA-simultaneous component analysis (ANOVA-SCA), stages 2 and 3 of reproduction show similarity in metabolite abundance regulation compared to stage 1. Metabolites were classified as being either dependent or independent of reproduction in the pairwise concentration correlation based on Pearson correlation coefficients. This study observed that the D. magna reproduction stage is an important consideration and potential variable and should be considered carefully when conducting metabolomic experiments using D. magna.


Daphnia , Water Pollutants, Chemical , Animals , Metabolomics , Reproduction , Zooplankton
18.
Water Res ; 166: 115033, 2019 Dec 01.
Article En | MEDLINE | ID: mdl-31505309

The inclusion of omics data into water quality monitoring programs is being considered to help alleviate the growing threat to water resources and ecosystem services. Despite the increasing need, the biological early warning system (BEWS), the widely used real-time water quality monitoring system, does not currently incorporate omics information, despite that metabolomics is a highly sensitive indicator of organism health and stress. We examined Daphnia magna metabolomics, which is the analysis of small molecules in living D. magna, as a potential water quality parameter for incorporation in the BEWS. The concentrations of 24 metabolites were measured with changes in water quality and variation of metabolite abundances was compared within and between conditions. Age-dependent monitoring revealed that matured individuals older than 8 days are appropriate model organisms for monitoring based on their low metabolomic variation as compared to younger daphnids. Hourly monitoring of metabolic variability and regulation under ambient and starved conditions demonstrated the rapid and sensitive detection of nutritional changes. Moreover, the metabolomic dysregulation due to exposure to the pollutant propranolol was also observed. By integrating all the observations, we found that the D. magna metabolome is a sensitive and useful parameter for detecting water quality changes and how these alter the function of keystone organisms. As such, this metabolomics-based framework is applicable to BEWS and highlights the beneficial advantages of integrating biomolecular and apical endpoint observations for enhanced performance in biomonitoring programs.


Daphnia , Water Pollutants, Chemical , Animals , Ecosystem , Metabolomics , Water Quality
19.
J Gen Appl Microbiol ; 64(5): 232-239, 2018 Nov 09.
Article En | MEDLINE | ID: mdl-30033973

Coastal ecosystems, play critical ecological roles of which tidal flats are a significant component of coastal wetlands, such as habitat and nutrient cycling in aquatic biology. Microbial communities in tidal flats are known to play vital roles of self-purification. And the microbial ecology of the sediment is easily affected by human activities and pollution. In this paper, we applied pyrosequencing technology to investigate microbial communities in three different tidal flats (Ganghwa Island, Ongnyeon land region and Yeongjong Island) on the Incheon, Korea peninsula. A total of 16,906 sequences were obtained. We used these sequences to identify the dominant phyla in the three tidal flats: Proteobacteria, Chloroflexi, Actinobacteria, and Bacteroidetes. The composition of the bacterial community of Ganghwa Island and the Ongnyeon region were more similar to each other than they were to the bacterial community of Yeongjong Island. Simpson's dominance index of Yeongjong Island was higher than that of the other regions, and the Shannon diversity index of this region was the lowest. Previous research of samples in these regions indicated that the three tidal flats had similar geochemical characteristics. However, their bacterial communities were rather distinct. This might be because the analysis of microbial communities and physiochemical analysis have different perspectives. Therefore, the pyrosequencing of a bacterial community with physiochemical analysis is recommended as an effective monitoring tool for the comprehensive management of tidal flats.


Bacteria/classification , Bacteria/isolation & purification , Biodiversity , Environmental Microbiology , Geologic Sediments/microbiology , Microbiota , Bacteria/genetics , DNA, Bacterial/genetics , Metagenomics , Phylogeny , RNA, Ribosomal, 16S , Republic of Korea , Seawater/microbiology
20.
Environ Pollut ; 241: 869-878, 2018 Oct.
Article En | MEDLINE | ID: mdl-29913414

Propranolol (PRO), a human ß-AR (ß-adrenergic receptor) antagonist, is considered to result in specific effects in a non-target species, D. magna, based on our previous studies. The present study investigated the effects of ß-AR agents, including an antagonist and agonist using pharmacologically relevant endpoints as well as a more holistic gene expression approach to reveal the impacts and potential mode of actions (MOAs) in the model non-target species. Results show that the responses in cardiac endpoints and gene expression in D. magna are partially similar but distinguishable from the observations in different organisms. No effect was observed on heart size growth in PRO and isoprenaline (ISO) exposure. The contraction capacity of the heart was decreased in ISO exposure, and the heart rate was decreased in PRO exposure. Time-series exposures showed different magnitudes of effect on heart rate and gene expression dependent on the type of chemical exposure. Significant enrichment of gene families involved in protein metabolism and biotransformation was observed within the differentially expressed genes, and we also observed differential expression in juvenile hormone-inducible proteins in ISO and PRO exposure, which is suspected of having endocrine disruption potential. Taken together, deviation between the effects of PRO and ISO in D. magna and other organisms suggests dissimilarity in MOAs or attributes of target bio-molecules between species. Additionally, PRO and ISO may act as endocrine disruptors based on the gene expression observation. Results in the present study confirm that it is challenging to predict ecological impact of active pharmaceutical ingredients (APIs) based on the available data acquired through human-focused studies. Furthermore, the present study provided unique data and a case study on the impact of APIs in a non-target organism.


Adrenergic beta-Antagonists/toxicity , Daphnia/drug effects , Gene Expression/drug effects , Heart/drug effects , Propranolol/toxicity , Animals , Biotransformation , Endocrine Disruptors/metabolism , Heart/anatomy & histology , Heart/physiology , Propranolol/metabolism , Receptors, Adrenergic, beta , Water Pollutants, Chemical/metabolism
...