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2.
Acta Crystallogr D Biol Crystallogr ; 71(Pt 11): 2344-53, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26527149

RESUMEN

The three-dimensional structures of the native enzyme and the FMN complex of the overexpressed form of the oxygenating component of the type II Baeyer-Villiger 3,6-diketocamphane monooxygenase have been determined to 1.9 Å resolution. The structure of this dimeric FMN-dependent enzyme, which is encoded on the large CAM plasmid of Pseudomonas putida, has been solved by a combination of multiple anomalous dispersion from a bromine crystal soak and molecular replacement using a bacterial luciferase model. The orientation of the isoalloxazine ring of the FMN cofactor in the active site of this TIM-barrel fold enzyme differs significantly from that previously observed in enzymes of the bacterial luciferase-like superfamily. The Ala77 residue is in a cis conformation and forms a ß-bulge at the C-terminus of ß-strand 3, which is a feature observed in many proteins of this superfamily.


Asunto(s)
Proteínas Bacterianas/química , Oxigenasas/química , Pseudomonas putida/química , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Dominio Catalítico , Cristalografía por Rayos X , FMN Reductasa/metabolismo , Mononucleótido de Flavina/metabolismo , Modelos Moleculares , Datos de Secuencia Molecular , Oxigenasas/genética , Oxigenasas/metabolismo , Plásmidos/genética , Conformación Proteica , Pliegue de Proteína , Pseudomonas putida/genética , Pseudomonas putida/metabolismo , Alineación de Secuencia
3.
Appl Microbiol Biotechnol ; 98(9): 3975-86, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24190498

RESUMEN

The major limitation in the synthetic application of two-component Baeyer-Villiger monooxygenases was addressed by identifying the 28-kDa flavin-reductase Fre from Escherichia coli as a suitable supplier of reduced FMN for these enzymes. Coexpression of Fre with either 2,5- or 3,6-diketocamphane monooxygenase from Pseudomonas putida NCIMB 10007 significantly enhanced the conversion of camphor and norcamphor serving as representative ketones. With purified enzymes, full conversion was achieved, while only slight amounts of product were formed in the absence of this flavin reductase. Fusion of the genes of Fre and DKCMOs into single open reading frame constructs resulted in unstable proteins exhibiting flavin reducing, but poor oxygenating activity, which led to overall decreased conversion of camphor.


Asunto(s)
Alcanfor/metabolismo , Coenzimas/metabolismo , Proteínas de Escherichia coli/metabolismo , Escherichia coli/enzimología , FMN Reductasa/metabolismo , Mononucleótido de Flavina/metabolismo , Oxigenasas de Función Mixta/metabolismo , Pseudomonas putida/enzimología , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , FMN Reductasa/genética , Expresión Génica , Oxigenasas de Función Mixta/genética , Pseudomonas putida/metabolismo , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo
4.
Org Biomol Chem ; 10(31): 6249-65, 2012 Aug 21.
Artículo en Inglés | MEDLINE | ID: mdl-22733152

RESUMEN

Baeyer-Villiger monooxygenases (BVMOs) are useful enzymes for organic synthesis as they enable the direct and highly regio- and stereoselective oxidation of ketones to esters or lactones simply with molecular oxygen. This contribution covers novel concepts such as searching in protein sequence databases using distinct motifs to discover new Baeyer-Villiger monooxygenases as well as high-throughput assays to facilitate protein engineering in order to improve BVMOs with respect to substrate range, enantioselectivity, thermostability and other properties. Recent examples for the application of BVMOs in synthetic organic synthesis illustrate the broad potential of these biocatalysts. Furthermore, methods to facilitate the more efficient use of BVMOs in organic synthesis by applying e.g. improved cofactor regeneration, substrate feed and in situ product removal or immobilization are covered in this perspective.


Asunto(s)
Técnicas de Química Sintética , Cetonas/metabolismo , Oxigenasas de Función Mixta/genética , Oxigenasas de Función Mixta/metabolismo , Ingeniería de Proteínas , Secuencia de Aminoácidos , Animales , Bacterias/química , Bacterias/enzimología , Bacterias/genética , Bacterias/metabolismo , Biotransformación , Técnicas de Química Sintética/métodos , Ésteres/química , Ésteres/metabolismo , Hongos/química , Hongos/enzimología , Hongos/genética , Hongos/metabolismo , Humanos , Cetonas/química , Lactonas/química , Lactonas/metabolismo , Oxigenasas de Función Mixta/química , Datos de Secuencia Molecular , Oxidación-Reducción , Ingeniería de Proteínas/métodos , Estereoisomerismo
5.
Appl Microbiol Biotechnol ; 96(2): 419-29, 2012 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-22286514

RESUMEN

The camphor-degrading Baeyer-Villiger monooxygenases (BVMOs) from Pseudomonas putida NCIMB 10007 have been of interest for over 40 years. So far the FMN- and NADH-dependent type II BVMO 3,6-diketocamphane 1,6-monooxygenase (3,6-DKCMO) and the FAD- and NADPH-dependent type I BVMO 2-oxo-∆3-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase (OTEMO) have not been entirely studied, since it was not possible to produce those enzymes in satisfactory amounts and purity. In this study, we were able to clone and recombinantly express both enzymes and subsequently use them as biocatalysts for various mono- and bicyclic ketones. Full conversion could be reached with both enzymes towards (±)-cis-bicyclo[3.2.0]hept-2-en-6-one and with 3,6-DKCMO towards (−)-camphor. Further OTEMO gave full conversion with norcamphor. OTEMO was found to have a pH optimum of 9 and a temperature optimum of 20 °C and converted (±)-cis-bicyclo[3.2.0]hept-2-en-6-one with a k cat/K M value of 49.3 mM-1 s-1.


Asunto(s)
Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Alcanfor/metabolismo , Escherichia coli/genética , Oxigenasas de Función Mixta/química , Oxigenasas de Función Mixta/genética , Pseudomonas putida/enzimología , Proteínas Bacterianas/metabolismo , Alcanfor/química , Estabilidad de Enzimas , Escherichia coli/metabolismo , Expresión Génica , Cinética , Oxigenasas de Función Mixta/metabolismo , Datos de Secuencia Molecular , Filogenia , Pseudomonas putida/química , Pseudomonas putida/clasificación , Pseudomonas putida/genética , Especificidad por Sustrato
6.
AMB Express ; 1(1): 13, 2011 Jun 23.
Artículo en Inglés | MEDLINE | ID: mdl-21906366

RESUMEN

Three different Baeyer-Villiger monooxygenases (BVMOs) were reported to be involved in the camphor metabolism by Pseudomonas putida NCIMB 10007. During (+)-camphor degradation, 2,5-diketocamphane is formed serving as substrate for the 2,5-diketocamphane 1,2-monooxygenase. This enzyme is encoded on the CAM plasmid and depends on the cofactors FMN and NADH and hence belongs to the group of type II BVMOs. We have cloned and recombinantly expressed the oxygenating subunit of the 2,5-diketocamphane 1,2-monooxygenase (2,5-DKCMO) in E. coli followed by His-tag-based affinity purification. A range of compounds representing different BVMO substrate classes were then investigated, but only bicyclic ketones were converted by 2,5-DKCMO used as crude cell extract or after purification. Interestingly, also (-)-camphor was oxidized, but conversion was about 3-fold lower compared to (+)-camphor. Moreover, activity of purified 2,5-DKCMO was observed in the absence of an NADH-dehydrogenase subunit.

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