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1.
Comput Biol Chem ; 83: 107112, 2019 Dec.
Article En | MEDLINE | ID: mdl-31480006

Prostate cancer is a common cause of death in men and a novel treating methods should be developed. In order to find a new drug for prostate cancer, a series of novel conformationally constrained analogues of (+)-goniofufurone and 7-epi-(+)-goniofufurone, as well as the newly synthesized styryl lactones containing the cinnamic acid ester groups were evaluated for in vitro cytotoxicity against prostate cancer cell (PC-3). Furthermore, prediction of physicochemical characteristics and drugability as well as in silico ADME-Tox tests of investigated compounds were performed. The 3D-QSAR model was established using the comparative molecular field analysis method. According to obtained results, the tricyclic compounds 9 and 10 had the highest potency with IC50 < 20 µM. Evaluation of structural features through 3D-QSAR model identified steric field feature on the cinnamic acid ester groups at C-7 as a crucial for the cytotoxic activity. This research suggests that most of the analysed compounds have desirable properties for drug candidates and high potential in drug development, which recommend them for further research in treatment of prostate cancer. Furthermore, obtained 3D-QSAR model is able to successfully identify styryl lactones that have significant cytotoxic activity and provide information for screening and design of novel inhibitors against PC-3 cell line that could be used as drugs in treatment of the prostate cancer.


Antineoplastic Agents, Phytogenic/pharmacology , Biological Products/pharmacology , Lactones/pharmacology , Quantitative Structure-Activity Relationship , Styrenes/pharmacology , Antineoplastic Agents, Phytogenic/chemistry , Antineoplastic Agents, Phytogenic/metabolism , Biological Products/chemistry , Biological Products/metabolism , Cell Proliferation/drug effects , Computer Simulation , Dose-Response Relationship, Drug , Drug Screening Assays, Antitumor , Humans , Lactones/chemistry , Lactones/metabolism , Models, Molecular , PC-3 Cells , Styrenes/chemistry , Styrenes/metabolism
2.
Comput Biol Chem ; 80: 23-30, 2019 Jun.
Article En | MEDLINE | ID: mdl-30878814

In this paper, the guidelines for the interpretation of the results of quantitative structure-retention relationship (QSRR) modeling, comparison and assessment of the established models, as well as the selection of the best and most consistent QSRR model were presented. Various linear and non-linear chemometric regression techniques were used to build QSRR models for chromatographic lipophilicity prediction of a series of triazole, tetrazole, toluenesulfonylhydrazide, nitrile, dinitrile and dione steroid derivatives. Linear regression (LR) and multiple linear regression (MLR) were used as linear techniques, while artificial neural networks (ANNs) were applied as non-linear modeling techniques. Generated models were statistically evaluated applying different approaches for model comparison and ranking. Two non-parametric methods (generalized pair correlation method - GPCM and sum of ranking differences - SRD) were used for model ranking and assessment of the best model for chromatographic lipophilicity prediction using experimentally obtained logk values and row average as a reference ranking. Both, GPCM and SRD, provided highly similar model choice regardless on a different background. These results are in agreement with the classical approach.


Steroids/chemistry , Hydrophobic and Hydrophilic Interactions , Linear Models , Models, Chemical , Molecular Structure , Neural Networks, Computer , Quantitative Structure-Activity Relationship , Software
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