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Molecular dynamics simulations were performed to investigate the fracture mechanism and mechanical response of Ni/Graphene nanocomposites under nanoindentation. The effects of size and location of defect pores were explored by examining the pore structure transition, microstructure transition, variation of HCP atomic fraction and dislocation density with indentation depth, load-displacement relationship, and stress distribution. It was found that when the long edges of the pore are located along the longer dimension, the pores are fractured by indentation forces from the short edges. The closer the pore is to the indent, the smaller loading force is required for the pores to reach its fracture limit. For the long edges located along the transverse direction, the maximum indentation depth increases with the distance of the pore away from the indenter. The density of HCP atoms and dislocations in the composite gradually increases with the indentation depth. To understand the physical mechanism of the fracture behavior, we also evaluated the stress distribution in graphene at the fracture point.
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Platelet margination and adhesion are two critical and closely related steps in thrombus formation. Using dissipative particle dynamics (DPD) method that seamlessly models blood cells, blood plasma, and vessel walls with functionalized surfaces, we quantify the shear-induced margination and adhesion of platelets in microvascular blood flow. The results show that the occurrence of shear-induced RBC-platelet collisions has a remarkable influence on the degree of platelet margination. We characterize the lateral motion of individual platelets by a mean square displacement analysis of platelet trajectories, and find that the wall-induced lift force and the shear-induced displacement in wall-bounded flow cause the variation in near-wall platelet distribution. We then investigate the platelet adhesive dynamics under different flow conditions, by conducting DPD simulations of blood flow in a microtube with fibrinogen-coated wall surfaces. We find that the platelet adhesion is enhanced with the increase of fibrinogen concentration level but decreased with the increase of shear rate. These results are consistent with available experimental results. In addition, we demonstrate that the adherent platelets have a negative impact on the margination dynamics of the circulating platelets, which is mainly due to the climbing effect induced by the adherent ones. Taken together, these findings provide useful insights into the platelet margination and adhesion dynamics, which may facilitate the understanding of the predominant processes governing the initial stage of thrombus formation.
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Plaquetas , Microvasos , Adhesividad Plaquetaria , Trombosis , Humanos , Fibrinógeno/metabolismo , Microcirculación , Trombosis/fisiopatología , Microvasos/fisiopatologíaRESUMEN
The electrowetting effect and related applications of tiny droplets have aroused widespread research interest. In this work, we report molecular dynamics simulations of confinement dynamics of nanodroplets under different droplet-surface interactions and surface distances under an external electric field. So far, the effect of the surface-droplet interactions on electric field-induced dynamics behaviors of droplets in confined spaces has not been extensively studied. Our results show that in the absence of electric field there is a critical value of surface wettability for the shape transition of droplets. Above this value, the droplet is divided into small droplets adhered on the bottom and top surfaces; below this value, the droplets are detached from the surfaces. When an external electric field is applied parallel to the surfaces, the droplet spreads on the surface along the direction of the electric field. It was found that the surface separation significantly influences the transition of the droplet shape. The steady morphology of the droplets under the electric field depends on the surface-droplet interaction and surface separation. We explore the underlying mechanism causing the morphological transition through analyzing the molecular interactions, the number of interracial molecules and the interaction force between the droplets and surfaces. These results provide basic insights into the molecular interactions of nanodroplets under different confined environments, and clues for applications of confined nanodroplets under the control of electric field.
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Electricidad , Simulación de Dinámica Molecular , Humectabilidad , Tamaño de la PartículaRESUMEN
The viscosity of blood is an indicator in the understanding and treatment of disease. An elevated blood viscosity has been demonstrated in patients with Type 2 Diabetes Mellitus (T2DM), which might represent a risk factor for cardiovascular complications. However, the roles of glycated hemoglobin (HbA1c) and plasma fibrinogen levels on the elevated blood viscosity in subjects with T2DM at different chronic glycemic conditions are still not clear. Here, we evaluate the relationship between the blood viscosity and HbA1c as well as plasma fibrinogen levels in patients with T2DM. The experimental data show that the mean values of the T2DM blood viscosity are higher in groups with higher HbA1c levels, but the correlation between the T2DM blood viscosity and the HbA1c level is not obvious. Instead, when we investigate the influence of plasma fibrinogen level on the blood viscosity in T2DM subjects, we find that the T2DM blood viscosity is significantly and positively correlated with the plasma fibrinogen level. Further, to probe the combined effects of multiple factors (including the HbA1c and plasma fibrinogen levels) on the altered blood viscosity in T2DM, we regroup the experimental data based on the T2DM blood viscosity values at both the low and high shear rates, and our results suggest that the influence of the elevated HbA1c level on blood viscosity is quite limited, although it is an important indicator of glycemic control in T2DM patients. Instead, the elevated blood hematocrit, the enhanced red blood cell (RBC) aggregation induced by the increased plasma fibrinogen level, and the reduced RBC deformation play key roles in the determination of blood viscosity in T2DM. Together, these experimental results are helpful in identifying the key determinants for the altered T2DM blood viscosity, which can be used in future studies of the hemorheological disturbances of T2DM patients.
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To find the predictors of High Dose Methotrexate toxicities in childhood Acute Lymphoblastic Leukemia Patients. This study included 198 Childhood Acute Lymphoblastic Leukemia patients (303 infusions) who were treated with High Dose Methotrexate. Methotrexate levels at different time point were measured by modified enzyme multiplied immunoassay technique assay. The correlation between Methotrexate levels and toxicity was evaluated by Receiver Operating Characteristic curve. When the Methotrexate level at 42 h was lower than 0.76 µmol/L, the sensitivity for predicting thorough clearance at 66 h was 90.78%. When the Methotrexate level at 42 h was higher than1.5 µmol/L, the sensitivity for predicting delayed clearance was 82.17%. When the Methotrexate level at 66 h was higher than 0.5 µmol/L, the sensitivity for predicting Methotrexate toxicity was 89.09%. When the Methotrexate level at 66 h was lower than 0.1 µmol/L, the sensitivity for predicting Methotrexate nontoxicity was 92.73%. The Methotrexate level at 42 h could be predictor for delayed clearance. The Methotrexate level at 66 h could be predictor for toxicity.
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Humanos , Masculino , Femenino , Lactante , Preescolar , Niño , Adolescente , Pacientes/clasificación , Metotrexato/administración & dosificación , Metotrexato/análisis , Leucemia-Linfoma Linfoblástico de Células Precursoras/patología , Predicción , Curva ROC , Técnica de Inmunoensayo de Enzimas Multiplicadas/instrumentación , Dosificación/efectos adversosRESUMEN
BACKGROUND: Methotrexate is an important component in many chemotherapy protocols. The blood concentration of Methotrexate is used to determine the regimen of folinic acid. However, the lower limit of Siemens assay kit is 0.30 µmol/L in China. This study extended the limit from 0.3 to 0.05 µmol/L and reduced the test cost by optimizing the parameters of Enzyme Multiplied Immunoassay Technique assay. METHODS: Parameters of Enzyme Multiplied Immunoassay Technique assay were modified to decrease the volume of reagents A and B. Then a standard curve with a new custom set of calibrators was prepared to detect low concentration. Intra-day and inter-day imprecision were assessed by control material and samples. The linearity of the modified assay was verified by analyzing a range of quality controls with known concentration from 0.05 to 1.00 µmol/L. At last, the same samples were tested by modified Enzyme Multiplied Immunoassay Technique assay and Liquid Chromatography-tandem Mass Spectrometry assay respectively. A simple linear regression was performed to verify the validity of the modified Enzyme Multiplied Immunoassay Technique assay. RESULTS: Intra-day and inter-day imprecision show good reproducibility at all levels (0.05, 0.12, 0.43, 0.82 µmol/L). The linearity equation of modified assay was y = 0.9913x + 0.0046, in which y was the mean of measured concentration and x was the target concentration (R2 = 0.9994). In the range of 0.05-10.00 µmol/L, correlation between the Modified assay and Liquid Chromatography-tandem Mass Spectrometry assay was significant (r = 0.9968). In the range of 0.30-10.00 µmol/L, the correlation between modified and commercial assays was significant (r = 0.9987) as well. CONCLUSIONS: The modified assay enhanced the sensitivity of Siemens VIVA-E to 0.05 µmol/L. In addition, the test number of a reagent Kit increased from 140 to 210. This means the cost of detection was reduced about 30%.
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Antimetabolitos Antineoplásicos/sangre , Técnica de Inmunoensayo de Enzimas Multiplicadas , Metotrexato/sangre , Niño , Cromatografía Liquida , Costos y Análisis de Costo , Técnica de Inmunoensayo de Enzimas Multiplicadas/economía , Humanos , Límite de Detección , Leucemia-Linfoma Linfoblástico de Células Precursoras/sangre , Reproducibilidad de los Resultados , Espectrometría de Masas en TándemRESUMEN
Using molecular dynamics simulations based on explicit-solvent model, we study migration of polymer-modified nanoparticles through nanochannels coated with polymers. The polymers densely grafted on the spherical nanoparticle and the channel surface form spherical polymer brush (SPB) and planar polymer brush (PPB), respectively. The migration of the neutral polymer-modified nanoparticle is driven by electroosmotic flow (EOF). The effects of the electric field strength and the SPB-PPB interaction on polymer conformations and transport dynamics of the SPB are explored. The migration velocity of the SPB reduces as the interaction between the SPB and the PPB increases. For strong SPB-PPB interaction, the directional migration of the SPB can be triggered only after the electric field strength exceeds a critical value. The high EOF velocity forces the center of mass of the spherical nanoparticle to keep near the central region of the channel due to high shear rate close to the brush-fluid interface. Unlike electrophoresis of charged polymer-grafted spherical particles, the SPB adopts a more extended conformation in the plane perpendicular to the EOF direction.
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We study the conformational behavior of spherical polyelectrolyte brushes in the presence of monovalent and trivalent counterions in a confined environment. The confinement is exerted by two parallel walls on the brushes. The enhancement of the confinement induces the extension of grafted chains. For the monovalent case, the increase of the charge fraction leads to extended brush conformation for different slit width (distance between two walls) but collapsed brush in the presence of trivalent counterions is observed. The confinement does not affect electrostatic correlation between trivalent counterions and charged monomers. However, it was found that narrow slit width contributes to stronger electrostatic correlation for the monovalent case. This is because more monovalent counterions are inside the brush at strong confinement, but almost all trivalent counterions are trapped into the brush independently of the slit width. The diffusion of counterions under the confinement is related to the electrostatic correlation. Our simulations also reveal that the brush thickness depends on the slit width nonlinearly.
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We report an all-atom molecular dynamics study of the structures and dynamics of salty water droplets on a silicon surface under the influence of applied electric field. Our simulation results support ion-specific effects on the elongation dynamics of salty nanodroplets, induced by the field. This feature has not been explored up to now in monovalent salts. Nevertheless, the importance of ion-specific effects is widely confirmed in biological and colloidal systems. In particular, the increase of salt concentration enhances the effect of the nature of ions on the wetting properties of droplets. In the presence of electric field (0.05 V Å-1), a complete spreading is implemented in a short time for different droplets at a concentration of 1 M, and the droplet morphology is stable, observed at long time scales. However, a higher salt concentration of 4 M considerably suppresses the spreading process owing to the increase of surface tension. It was found that the NaCl droplet shows deformation oscillations along the external field, but cannot fully wet the substrate surface. By contrast, the CsCl droplet reaches complete elongation rapidly and adopts a steady strip shape. The KCl droplet undergoes frequent transitions between breakup and connection. Additionally, the droplets can be elongated only when the electric field strength exceeds a threshold value. The dipole orientation of interfacial water and the ionic diffusion exhibit ion-specific dependences, but the hydrogen bond network is scarcely disturbed, excluding a concentration-dependent effect.
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Nitrites play multiple characteristic functions in invasion and metastasis of hepatic cancer cells, but the exact mechanism is not yet known. Cancer cells can maintain the malignant characteristics via clearance of excess mitochondria by mitophagy. The purpose of this article was to determine the roles of nitrite, reactive oxygen species (ROS) and hypoxia inducing factor 1 alpha (HIF-1 α) in mitophagy of hepatic cancer cells. After exposure of human hepatocellular carcinoma SMMC-7721 cells to a serial concentrations of sodium nitrite for 24 h under normal oxygen, the maximal cell vitality was increased by 16 mg x (-1) sodium nitrite. In addition, the potentials of migration and invasion for SMMC-7721 cells were increased significantly at the same time. Furthermore, sodium nitrite exposure displayed an increase of stress fibers, lamellipodum and perinuclear mitochondrial distribution by cell staining with Actin-Tracker Green and Mito-Tracker Red, which was reversed by N-acetylcysteine (NAC, a reactive oxygen scavenger). DCFH-DA staining with fluorescent microscopy showed that the intracellular level of ROS concentration was increased by the sodium nitrite treatment. LC3 immunostaining and Western blot results showed that sodium nitrite enhanced cell autophagy flux. Under the transmission electron microscopy (TEM), more autolysosomes formed after sodium nitrite treatment and NAC could prevent autophagosome degradation. RT-PCR results indicated that the expression levels of COX I and COXIV mRNA were decreased significantly after sodium nitrite treatment. Meanwhile, laser scanning confocal microscopy showed that sodium nitrite significantly reduced mitochondrial mass detected by Mito-Tracker Green staining. The expression levels of HIF-1α, Beclin-1 and Bnip3 (mitophagy marker molecular) increased remarkably after sodium nitrite treatment, which were reversed by NAC. Our results demonstrated that sodium nitrite (16 mg x L(-1)) increased the potentials of invasion and migration of hepatic cancer SMMC-7721 cells through induction of ROS and HIF-1α mediated mitophagy.
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Carcinoma Hepatocelular/patología , Neoplasias Hepáticas/patología , Mitofagia , Nitrito de Sodio/farmacología , Acetilcisteína/farmacología , Autofagia , Línea Celular Tumoral , Movimiento Celular , Humanos , Subunidad alfa del Factor 1 Inducible por Hipoxia/metabolismo , Invasividad Neoplásica , Nitritos/metabolismo , Especies Reactivas de Oxígeno/metabolismoRESUMEN
Recent studies have demonstrated that nitrite and ammonia levels are higher in the tumor environment, but their effects on cancer cells remains unclear. The present study was designed to determine the effects of nitrite and ammonia on tumor invasion and the role of reactive oxygen (ROS)/ornithine decarboxylase (ODC) pathway. SMMC-7721 cells were treated with sodium nitrite, ammonium chloride, sodium nitrite and ammonium chloride mixture for 24 h, the cell viability was analyzed using the MTT assay, cell invasion was analyzed with the transwell assay, the intracellular ROS levels were detected with a reactive oxygen species (ROS) test kits, the expression of intracellular ODC was examined with immunofluorescence and Western blot, the expression of matrix metallopeptidase-2 (MMP-2) and MMP-9 were analyzed by Western blot. Compared with the control group, SMMC-7721 cells exhibited an increase in cell viability, invasion ability, ROS levels and ODC protein after exposure to 150 µmol·L(-1) sodium nitrite and ammonium chloride mixture for 24 h. The invasive activity was reduced by ROS scavenger N-acetycysteine (NAC) in SMMC-7721 cells. The specific ODC inhibitor difluoromethylornithine (DFMO) increased ROS levels and weakened the ability of sodium nitrite and ammonium chloride mixture in the regulation of invasion of SMMC-7721 cells. These data demonstrated that sodium nitrite and ammonium chloride mixture promote invasion of SMMC-7721 cells by enhancing ROS/ODC pathway.
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Amoníaco/farmacología , Carcinoma Hepatocelular/patología , Neoplasias Hepáticas/patología , Invasividad Neoplásica , Ornitina Descarboxilasa/metabolismo , Especies Reactivas de Oxígeno/metabolismo , Nitrito de Sodio/farmacología , Línea Celular Tumoral , Supervivencia Celular , Humanos , Metaloproteinasa 2 de la Matriz/metabolismo , Metaloproteinasa 9 de la Matriz/metabolismoRESUMEN
A basic understanding of the transport mechanisms of nanostructures in a polymer brush-modified nanochannel as well as the brush-nanostructure interactions at molecular level is important to design and fabricate emerging smart nano/microfluidic channels. In this work, we report coarse-grained molecular dynamics simulations of the translocation of nanoparticles through a cylindrical nanochannel coated with the polymer brush. The effects of the interparticle interaction and grafting density on the distribution and electrokinetic transport of nanoparticles are addressed in detail. Analysis of the distribution and velocity profiles of nanoparticles from the simulations indicate that the location of nanoparticles along the radial direction and their migration velocity are very sensitive to the change of interparticle interaction. We find complicated transport dynamics of nanoparticles under the influence of various grafting densities. The nanoparticles show markedly different translocation behavior upon increasing the grafting density, which depends on the counterion distribution, free room within the brush, nanoparticle-polymer friction, and brush configuration. Our results may serve as a useful starting point for the transport of nanostructures in polymer-modified channels and help to guide the design of novel smart nanofluidic channels for controlling the migration behavior of nanostructures.
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The B27K-DTrI insulin (human insulin with B28-30 removed and B27 Thr replaced by Lys) was reported to have superior monomeric property with 80% insulin activity in vivo. It has potential use as a new fast-acting analog of insulin. We cloned the monomeric insulin B27 DTrI precursor (MIP) into the pTWIN1 vector, and prepared by intein mediated expression in Escherichia coli. After tryptic digestion, the MIP was converted to B27K-DTrI insulin. The product was purified by HPLC. The mass spectrometry showed that the molecular mass of purified B27K-DTrI was consistent with the theoretical value.
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Escherichia coli/genética , Insulina/análogos & derivados , Secuencia de Aminoácidos , Expresión Génica , Humanos , Insulina/química , Insulina/genética , Insulina/aislamiento & purificación , Datos de Secuencia Molecular , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/aislamiento & purificaciónRESUMEN
We use Brownian dynamics (BD) simulations to investigate the formation and structural characteristics of the complex between a spherical polyelectrolyte brush (SPB) and oppositely charged surfactants. Increasing the amount of added surfactants leads to a collapsed conformation of the SPB and the number of adsorbed surfactants exhibits a linear dependence. Nevertheless, the surfactant uptake into the SPB does not increase with further addition of surfactants. It is found that the surfactant length has a strong influence on the SPB conformation and the adsorption properties of surfactant. Upon changing the surfactant length from 3 to 11, the SPB undergoes a swelling-deswelling-reswelling conformational transition. The brush deswelling is due to the increase in the surfactant uptake. The increasing size of adsorbed aggregates is a main reason for reswelling of the SPB. A non-linear relationship between the brush thickness and the grafting density is observed. Especially at intermediate grafting densities, increasing the number of grafted chains has a weak effect on the brush thickness. We also find that a completely collapsed brush conformation occurs at high surfactant/SPB charge ratios or large surfactant lengths, while the brush layer is in a partly collapsed or extended state at an intermediate charge ratio and surfactant length.
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We report a molecular dynamics study on non-equilibrium dynamics of polyelectrolyte brushes under external electric fields. In this work, the effects of chain stiffness and salt concentration on static and dynamic responses of the brushes are addressed in detail. Our simulations indicate that varying these parameters induce rich electro-responsive behavior of the brushes. The increase of salt concentration results in the enhancement of an opposite electric field formed by non-equilibrium distribution of cations and anions, which resists stretching or shrinkage of grafted chains. At strong positive electric fields, the flexible brushes are more sensitive to the change of salt concentration. When reversing the electric field, the stiff brushes undergo a conformational transition from collapse to complete stretching. At high salt concentrations, dynamic responsive magnitude of the brush thickness to added electric field is strongly reduced. It was found that the fall time for the stiff brush becomes much shorter than that for the flexible brush. Additionally, increasing ion concentration leads to an excess extension or shrinkage of flexible brushes. For strongly stiff brushes, such phenomenon occurs in the presence or absence of salt.