Shifts in composition and function of bacterial communities reveal the effect of small barriers on nitrous oxide and methane accumulation in fragmented rivers.

Rivers are often blocked by barriers to form different habitats, but it is not clear whether this change will affect the accumulation of N2O and CH4 in rivers. Here, low barriers (less than 2 m, LB) increased N2O concentration by 1.13 times and CH4 decreased by 0.118 times, while high barriers (higher than 2 m, less than 5 m high, HB) increased N2O concentration by 1.19 times and CH4 by 2.76 times. Co-occurrence network analysis indicated LB and HB can promote the enrichment of Cyanobium and Chloroflexi, further limiting complete denitrification and increasing N2O accumulation. The LB promotes methanotrophs (Methylocystis, Methylophilus, and Methylotenera) to compete with denitrifiers (Pseudomonas) in water, and reduce CH4 accumulation. While the HB can promote the methanotrophs to compete with nitrifiers (Nitrosospira) in sediment, thus reducing the consumption of CH4. LB and HB reduce river velocity, increase water depth, and reduce dissolved oxygen (DO), leading to enrichment of nirS-type denitrifiers and the increase of N2O concentration in water. Moreover, the HB reduces DO concentration and pmoA gene abundance in water, which can increase the accumulation of CH4. In light of the changes in the microbial community and variation in N2O and CH4 accumulation, the impact of fragmented rivers on global greenhouse gas emissions merits further study.

[Effects of Farming Practices on Soil Nitrogen and Phosphorus Concentrations and Its Loss in the Drawdown Area of the Tributary Embayment of the Three Gorges Reservoir].

As the Three Gorges Reservoir (TGR) periodically operates at low water levels, its drawdown area has been utilized for cultivation by local farmers due to the overlap of the non-inundated period and the crop-growth period. However, traditional agricultural planting may affect the aquatic environment of the TGR area. To explain the effects of agricultural farming and abandoned farming on the water environment, a study was conducted in the drawdown area in an embayment of the Pengxi River (a tributary of the TGR). Corn, potato, and peanut fields were investigated for nitrogen and phosphorus content in surface soil, during the farming period (March to September 2018) and the conversion period (March to September 2019). Nitrogen and phosphorus balance models were constructed for farmland and abandoned farmland, to compare and analyze the budgets and loss risk of nitrogen and phosphorus from soil in the drawdown area. The results showed that the ammonia nitrogen (NH4+-N), total phosphorus (TP), and inorganic phosphorus (IP) content of soil in the corn field varied significantly across different planting periods. The concentrations of ammonium nitrogen and nitrate nitrogen (NO3--N) were significantly higher in farmland soil than in abandoned farmland soil, and the concentrations of total phosphorus (TP), inorganic phosphorus (IP), and calcium-bound phosphorus (Ca-P) were significantly lower in farmland soil than in abandoned farmland soil. The different soils were ranked according to the intensity of nitrogen and phosphorus surplus as follows:corn field>potato field>peanut field. The apparent surplus values in the different farmland soils were 76.89 kg ·hm-2(corn field), 51.92 kg ·hm-2(potato field), and 43.74 kg ·hm-2(peanut field) for nitrogen, and 79.69 kg ·hm-2(corn field), 75.76 kg ·hm-2(potato field), and 17.78 kg ·hm-2(peanut field) for phosphorous. Overall, the surplus intensities of nitrogen and phosphorus in all three croplands were higher than the respective risk thresholds, indicating potential nitrogen and phosphorus pollution in the three farmland types. Agricultural farming in the drawdown area may therefore increase the risk of nitrogen and phosphorus loss and is not conducive to the protection of the aquatic environment.

[Isolation, identification and enzymological characterization of a new fungal with high laccase production from agricultural waste composting].

A new fungal strain with high laccase production was isolated from the agricultural waste composting. It was identified as Hypocrea lixii based on morphological analysis and ITS sequence. The partial laccase gene of the new strain was successfully amplified using the primer pair Cu1AF and Cu2R. After purification and cloning of the PCR product, a 148 bp fragment of laccase gene was obtained. The laccase activity of the strain reached a peak value of 67.5 U x mL(-1) in liquid medium. The molecular mass of the purified laccase was determined to be about 60 x 10(3). The optimum temperature and pH for enzyme activity were 35 degrees C and 4.0, respectively. The half-time of the enzyme was more than 1 h at 60 degrees C. Under standard assay conditions, K(m) values was 1.00 mmol x L(-1) towards ABTS. Laccase activity was inhibited by several metal ions, such as Na+, Fe2+, Fe3+, Pb2+ and Zn2+. This strain has a good potential for application as a bioaugmentation strain in the agricultural waste composting system.

Responses of Phanerochaete chrysosporium to toxic pollutants: physiological flux, oxidative stress, and detoxification.

The white-rot fungus Phanerochaete chrysosporium has been widely used for the treatment of waste streams containing heavy metals and toxic organic pollutants. The development of fungal-based treatment technologies requires detailed knowledge of the relationship between bulk water quality and the physiological responses of fungi. A noninvasive microtest technique was used to quantify real-time changes in proton, oxygen, and cadmium ion fluxes following the exposure of P. chrysosporium to environmental toxic (2,4-dichlorophenol and cadmium). Significant changes in H(+) and O(2) flux occurred after exposure to 10 mg/L 2,4-dichlorophenol and 0.1 mM cadmium. Cd(2+) flux decreased with time. Reactive oxygen species formation and antioxidant levels increased after cadmium treatment. Superoxide dismutase activity correlated well with malondialdehyde levels (r(2) = 0.964) at low cadmium concentrations. However, this correlation diminished and malondialdehyde levels significantly increased at the highest cadmium concentration tested. Real-time microscale signatures of H(+), O(2), and Cd(2+) fluxes coupled with oxidative stress analysis can improve our understanding of the physiological responses of P. chrysosporium to toxic pollutants and provide useful information for the development of fungal-based technologies to improve the treatment of wastes cocontaminated with heavy metals and organic pollutants.

[Biodegradation mechanism of DDT and chlorpyrifos using molecular simulation].

In order to explore the microscopic degradation mechanism of organic pesticides degrading enzymes, we used molecular docking method to investigate the binding modes of DDT to laccase and chlorpyrifos to organophosphorus hydrolase, and obtained the corresponding complex structures. According to the principle of minimum scoring, the results showed that the MolDock scores were -103.134 and -111.626, re-rank scores were -72.858 and -80.261, respectively. And we used LPC/CSU server search the interactions between organic pesticides and their degrading enzymes. Our results showed that hydrophobic interaction was the strongest contacts in DDT-laccase complex, and both hydrogen bonds and hydrophobic interactions were the strongest contacts when chlorpyrifos-organophosphorus hydrolase complex. The amino acid residues Tyr224 in laccase and Arg254 in organophosphorus hydrolase were detected to play significant roles in catalytic processes.