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1.
J Phys Chem Lett ; 15(29): 7516-7523, 2024 Jul 25.
Artículo en Inglés | MEDLINE | ID: mdl-39023013

RESUMEN

The utility of semiconductor nanocrystals (NCs) in light-emitting diodes (LED) has shown great potential in the field of display, whereas the challenge remains in developing efficient and stable cadmium-free blue-emitting LED devices due to the poor photophysical properties of blue-emitting NCs. Herein, we develop a controllable synthesis of Cu-Ga-Zn-S (CGZS) semiconductor NCs that show blue light emission with a relative photoluminescence quantum yield exceeding 90%. Furthermore, we have successfully fabricated a solution-processed quantum-dot LED (QLED) using CGZS NCs, achieving a notable maximum external quantum efficiency (EQE) of 1.00% at a luminance of 100 cd/m2. Our work lays a foundational framework for advancing cadmium-free blue-emitting QLEDs and facilitates the development of quantum dot electroluminescent panchromatic displays.

2.
Microorganisms ; 12(3)2024 Feb 29.
Artículo en Inglés | MEDLINE | ID: mdl-38543550

RESUMEN

Potato common scab, an economically important disease worldwide, is caused by pathogenic Streptomyces strains mainly through the effects of thaxtomin. The cello-oligosaccharides binding protein CebE is proposed as a gateway to the pathogenic development of Streptomyces scabiei. In this study, two functional CebE encoding genes, GEO5601 and GEO7671, were identified in pathogenic Streptomyces sp. AMCC400023. With a higher binding affinity towards signal molecules, the deletion of GEO5601 severely impaired thaxtomin-producing capacity and reduced the strain's pathogenicity. Transcriptional analysis confirmed that CebE5601 is also responsible for the import and provision of carbon sources for cell growth. With lower binding affinity, the pathogenicity island (PAI)-localized CebE7671 may assume a new function of mediating the biological process of sporulation, given the significantly impaired formation of ΔGEO7671 spores. The mechanisms of action of CebE proteins unraveled in Streptomyces sp. AMCC400023 will help pave the way for more effective prevention of the potato common scab disease.

3.
ACS Appl Mater Interfaces ; 15(9): 12017-12023, 2023 Mar 08.
Artículo en Inglés | MEDLINE | ID: mdl-36802461

RESUMEN

Semiconductor materials with sufficiently wide band gaps are urgently desired for use in solar-blind ultraviolet detectors. In this work, the growth of AlSnO films was achieved through the magnetron sputtering technique. AlSnO films with band gaps in the range of 4.40-5.43 eV were obtained by varying the growth process, which demonstrates that the band gap of AlSnO is continuously tunable. What is more, based on the films prepared, narrow-band solar-blind ultraviolet detectors were fabricated with good solar-blind ultraviolet spectral selectivity, excellent detectivity, and narrow full widths at half-maximum in the response spectra, showing a great potential to be applied to solar-blind ultraviolet narrow-band detection. Therefore, based on the results above, this study focusing on the fabrication of detectors via band gap engineering can be a significant reference for researchers interested in solar-blind ultraviolet detection.

4.
FASEB J ; 36(12): e22659, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-36394534

RESUMEN

The arsenical resistance-3 (ACR3) family constitutes the most common pathway that confers high-level resistance to toxic metalloids in various microorganisms and lower plants. Based on the structural model constructed by AlphaFold2, the Acr3 antiporter from Bacillus subtilis (Acr3Bs ) exhibits a typical NhaA structure fold, with two discontinuous helices of transmembrane (TM) segments, TM4 and TM9, interacting with each other and forming an X-shaped structure. As the structural information available for these important arsenite-efflux pumps is limited, we investigated the evolutionary conservation among 300 homolog sequences and identified three conserved motifs in both the discontinuous helices and TM5. Through site-directed mutagenesis, microscale thermophoresis (MST), and fluorescence resonance energy transfer (FRET) analyses, the identified Motif C in TM9 was found to be a critical element for substrate binding, in which N292 and E295 are involved in substrate coordination, while R118 in TM4 and E322 in TM10 is responsible for structural stabilization. In addition, the highly conserved residues on Motif B of TM5 are potentially key factors in the protonation/deprotonation process. These consensus motifs and residues are essential for metalloid compound translocation of Acr3 antiporters, by framing the core domain and the typical X-shaped of NhaA fold.


Asunto(s)
Antiportadores , Arsenitos , Antiportadores/genética , Antiportadores/metabolismo , Arsenitos/metabolismo , Proteínas de Transporte de Membrana/metabolismo , Estructura Secundaria de Proteína
5.
Mol Microbiol ; 118(3): 244-257, 2022 09.
Artículo en Inglés | MEDLINE | ID: mdl-35852922

RESUMEN

Sodium-proton (Na+ /H+ ) antiporters from the ion transporter (IT) superfamily play a vital role in controlling the pH and electrolyte homeostasis. However, very limited information regarding their structural functions is available to date. In this study, the structural model of the NhaD antiporter was proposed as a typical hairpin structure of IT proteins, with two symmetrically conserved scaffold domains that frame the core substrate-binding sites, and four motifs were identified. Furthermore, 25 conserved sites involving these domains were subjected to site-directed mutagenesis, and all mutations resulted in an impact on transport abilities. In particular, as candidates for Na+ -binding sites, D166 and D405 mutations at hairpin discontinuities were detrimental to transport activities and were found to induce pronounced conformational changes using fluorescence resonance energy transfer (FRET) assays. In addition, as observed in the NhaA structure, some charged residues, for example, E64, E65, R454, and R464, are predicted to be involved in the net charge switch of NhaD activation, by collectively form a "pH sensor" at the entrance of the cytoplasmic funnel. Mutations encompassing these residues were detrimental to the transport activity of NhaD or lost the capacity to respond to pH signals and trigger conformational changes for Na+ translocation.


Asunto(s)
Antiportadores , Proteínas de Escherichia coli , Secuencia de Aminoácidos , Antiportadores/metabolismo , Proteínas Bacterianas/metabolismo , Proteínas de Escherichia coli/metabolismo , Concentración de Iones de Hidrógeno , Protones , Sodio/metabolismo , Intercambiadores de Sodio-Hidrógeno/química , Intercambiadores de Sodio-Hidrógeno/genética , Intercambiadores de Sodio-Hidrógeno/metabolismo
6.
Opt Lett ; 47(11): 2722-2725, 2022 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-35648914

RESUMEN

A high color rendering index (CRI) and stable spectra under different voltages are important parameters for large-area planar light sources. However, the spectrum of most electroluminescent white light-emitting diodes (el-WLEDs) with a single emissive layer (EML) varies with a changing voltage. Herein, an el-WLED is fabricated based on Cd-free Cu-In-Zn-S (CIZS)/ZnS nanocrystals (NCs) and poly [(9,9-dioctylfluorenyl-2,7-diyl)-co-(4,4'-(N-(p-butylphenyl))diphenylamine)] (TFB) as double EMLs, which exhibit white-light emission with a high CRI value of 91 and commission internationale de l'éclairage (CIE) color coordinates of (0.33, 0.33). Meanwhile, it has a stable spectrum under voltage up to 7 V and a maximum luminance up to 679 cd/m2 with a low turn-on voltage of 2.2 V. This work provides a foundation for Cd-free el-WLEDs with high CRI and stable spectra.

7.
J Phys Chem Lett ; 13(22): 4856-4863, 2022 Jun 09.
Artículo en Inglés | MEDLINE | ID: mdl-35617309

RESUMEN

Ternary Pb-free Cs-Cu-I perovskites have attracted widespread attention because of their excellent optical properties and environmentally friendly advantages. Herein, two different Pb-free ternary Cs3Cu2I5 nanocrystals (NCs) and CsCu2I3 microrods (MRs) were synthesized via a heating method. The phase and morphology transition from blue emission of Cs3Cu2I5 NCs to yellow emission of CsCu2I3 MRs could be tuned effectively by manipulating the reaction temperature, decreasing the maximum photoluminescence quantum yields (PLQYs) from 82.7% to ∼10%. More interestingly, the Cs3Cu2I5 NCs could self-assemble into stacking chains, which exhibited a strong dependence on the polarity of solvents. In addition, it was demonstrated that the rapid phase transition and luminescence tuning between Cs3Cu2I5 and CsCu2I3 films took only a few seconds by direct heating or exposure to the polar solvent. This work may deepen the understanding of the phase transition process in Cu-based perovskites and provide a fluorescence material with a short switching time for anticounterfeiting applications.

8.
J Antimicrob Chemother ; 77(3): 675-681, 2022 02 23.
Artículo en Inglés | MEDLINE | ID: mdl-34910133

RESUMEN

OBJECTIVES: The NorA antiporter of Staphylococcus aureus belongs to the major facilitator superfamily (MFS) and extrudes various kinds of drugs. With no structure available for this drug efflux pump, the aim of this study was to explore its important structural elements that contribute to substrate binding and drug transport. METHODS: Evolutionary conservative analyses were conducted on different compilations of NorA homologues to identify conservative motifs and residues. Site-directed mutations were constructed to verify the functional changes in NorA efflux capacities and the conformational changes were further measured by fluorescence resonance energy transfer (FRET) and microscale thermophoresis (MST) analysis. RESULTS: Besides Motif-A, Motif-B and Motif-C that were reported previously in MFS proteins, two other motifs, Motif-1 and Motif-2, were identified in NorA. Site-directed mutations of Motif-1 and Motif-2 as well as 11 predicted binding sites all caused remarkable reductions in drug resistance and efflux activity. Among these, mutant F16A/E222A/F303A/D307A showed an altered binding affinity for tetraphenylphosphonium chloride when measured by MST and Motif-1 mutant G114D/A117E/D118G/V119I and Motif-2 mutant Q325E/G326E/A328E/G330E displayed obvious conformational alterations when compared with the wild-type NorA in the FRET signal spectra. CONCLUSIONS: The NorA structure agrees well with the typical structures of MFS proteins, with two newly identified motifs (Motif-1 and Motif-2) that are critical to the structural stability of NorA, and sites F16, E222, F303 and D307 are involved in substrate binding.


Asunto(s)
Infecciones Estafilocócicas , Staphylococcus aureus , Antibacterianos/metabolismo , Proteínas Bacterianas/metabolismo , Humanos , Proteínas Asociadas a Resistencia a Múltiples Medicamentos/genética , Staphylococcus aureus/genética , Staphylococcus aureus/metabolismo
9.
J Phys Chem Lett ; 12(50): 12107-12113, 2021 Dec 23.
Artículo en Inglés | MEDLINE | ID: mdl-34910877

RESUMEN

Monochromaticity for light-emitting diodes (LEDs) is an important parameter. However, carbon dots-based light-emitting diodes (CDs-LEDs) usually suffer from broad emission, which limits the development of this material. In this work, high-quality carbon dots (CDs) with a quantum yield of 16.2% were synthesized. When they were mixed with poly(N-vinyl carbazole) (PVK) to form a homogeneous film, the solid-state fluorescence of CDs was realized. After fabrication and systematic optimization of the device, the full width at half-maximum (fwhm) of EL spectra could be narrowed to 64 nm in comparison with the fwhm of 77 nm for PL, demonstrating that structural engineering is an effective approach for improving the color purity of CDs-LEDs. Meanwhile, the performance of the devices is improving. The obtained CDs-LEDs display high monochromaticity with a maximum luminance of 681 cd/m2. This work provides a new way to optimize the monochromaticity and performance of CDs-LEDs.

10.
J Phys Chem Lett ; 12(30): 7113-7119, 2021 Aug 05.
Artículo en Inglés | MEDLINE | ID: mdl-34296612

RESUMEN

Combination of the merit of inorganic nanocrystals (NCs) and solution-processed conjugated polymer is a convenient strategy to obtain stable and efficient electroluminescent white-light-emitting diodes (el-WLEDs). In this work, an el-WLED was fabricated on the basis of Cd-free Cu-In-Zn-S (CIZS)/ZnS NCs blending with polyfluorene derivative poly[4-(octyloxy)-9,9-diphenylfluoren-2,7-diyl]-co-[5-(octyloxy)-9,9-diphenylfluoren-2,7-diyl] (PODPF), which exhibited a stable white light emission with a color rendering index value of 85. Meanwhile, it had a stable spectrum under high voltage due to the extremely weak energy transfer between PODPF and CIZS/ZnS NCs. To further improve the device performance, PC9O4 was used to replace PODPF, which presented better solubility and smoother film-forming properties. Thus, the maximum external quantum efficiency (EQE) of the optimized el-WLED was increased by 221% while maintaining a stable spectrum under high voltage. This work may provide a great foundation on color mixing cadmium-free el-WLEDs.

11.
Front Microbiol ; 12: 577001, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33815303

RESUMEN

Thermoacidophilic Alicyclobacillus strains attract great interests as the resource of thermostable or acidic enzymes. In this study, a putative gene encoding superoxide dismutase (AaSOD) was identified in a thermoacidophilic Alicyclobacillus strain. With a 16-fold activity observed, the AaSOD activity expressing in the medium of manganese enrichment was much higher than that in the iron medium. In addition, the purified AaSOD can be reconstituted exclusively with either Fe2+ or Mn2+, with its Mn-bound protein showing 25-fold activity than that of Fe-bound form. The optimal temperature for AaSOD reaction was 35°C, and was highly stable at any certain temperature up to 80°C. Of particular interest, the enzyme is found to be very stable across a wide pH range spanning from 2.0 to 10.0, which confers its robust stability in the acidic stomach environment and implies striking potentials as food additive and for medical use.

12.
J Antimicrob Chemother ; 76(6): 1420-1427, 2021 05 12.
Artículo en Inglés | MEDLINE | ID: mdl-33677568

RESUMEN

OBJECTIVES: The NorA efflux pump in Staphylococcus aureus mediates resistance to many fluoroquinolone (FQ) antibiotics. Three norA alleles with high sequence similarity are found in various S. aureus strains exhibiting different FQ resistance profiles. This study aimed to elucidate the underlying molecular basis for the varying efflux activity of these three allelic variations. METHODS: The norA genotypes of 20 S. aureus isolates were analysed. Multiple alignments and conservative analyses were conducted to explore the evolutionary variations. After heterologous expression in Escherichia coli, seven mutants were constructed for MIC tests, efflux activity and conformational change measurements. RESULTS: Three NorA alleles were identified that displayed different FQ MICs and varying efflux activity for ethidium bromide, with the NorAII protein showing the strongest activity. A total of 29 single amino acid polymorphisms were identified by conservative analysis within three allelic peptides, with seven sites densely distributed in the 277-297 region. Mutations of these seven residues in NorAII all significantly impaired drug resistance and efflux activity, and three key mutants showed conformational changes in fluorescence resonance energy transfer (FRET) analysis. CONCLUSIONS: Evolutionary variations of the 277-297 region could be a major explanation for the functional difference of three norA alleles and serve as a potential target for the development of novel NorA inhibitors.


Asunto(s)
Proteínas Asociadas a Resistencia a Múltiples Medicamentos , Staphylococcus aureus , Alelos , Antibacterianos/farmacología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Pruebas de Sensibilidad Microbiana , Proteínas Asociadas a Resistencia a Múltiples Medicamentos/genética , Staphylococcus aureus/genética , Staphylococcus aureus/metabolismo
13.
ACS Omega ; 5(12): 6358-6365, 2020 Mar 31.
Artículo en Inglés | MEDLINE | ID: mdl-32258870

RESUMEN

Metallurgical silicon was studied for photocatalytic H2 evolution activity. It has been found that metallurgical silicon with large particle size (above 800 nm) possesses poor photocatalytic activity because of the deteriorating photoelectric performance of the low-purity silicon. After size reduction (around 400 nm) and metal nanoparticle decoration, the photocatalytic performance was significantly enhanced to 1003.3 µmol·g-1·h-1. However, the photocatalytic performance of the Cu-, Ag-, and Pt-decorated silicon is degraded with the increase of time. Moreover, the degradation is independent of the metal. Electrochemical test and X-ray photoelectron spectroscopy suggested that the Mott-Schottky effect in the metal-silicon contact should be responsible for the degradation. After forming a heterojunction by vulcanizing the Ag-decorated silicon, the degradation was suppressed. Upgradation of the metal-silicon contact to form a heterojunction was a promising way to suppress the degradation and retain the high photocatalytic performance.

14.
Microb Cell Fact ; 18(1): 184, 2019 Oct 26.
Artículo en Inglés | MEDLINE | ID: mdl-31655591

RESUMEN

BACKGROUND: As an attracted compatible solute, 1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid (ectoine) showed great potentials in various field. However, lower productivity and high saline medium seriously hinder its wide applications. RESULTS: The entire ectoine metabolism, including pathways for ectoine synthesis and catabolism, was identified in the genome of an ectoine-excreting strain Halomonas hydrothermalis Y2. By in-frame deletion of genes encoding ectoine hydroxylase (EctD) and (or) ectoine hydrolase (DoeA) that responsible for ectoine catabolism, the pathways for ectoine utilization were disrupted and resulted in an obviously enhanced productivity. Using an optimized medium containing 100 g L-1 NaCl in a 500-mL flask, the double mutant of Y2/ΔectD/ΔdoeA synthesized 3.13 g L-1 ectoine after 30 h cultivation. This is much higher than that of the wild type strain (1.91 g L-1), and also exceeds the production of Y2/ΔectD (2.21 g L-1). The remarkably enhanced accumulation of ectoine by Y2/ΔectD/ΔdoeA implied a critical function of Doe pathway in the ectoine catabolism. Furthermore, to reduce the salinity of fermentation medium and overcome the wastewater treatment difficulty, mutants that lacking key Na+/H+ antiporter, Mrp and (or) NhaD2, were constructed based on strain Y2/ΔectD/ΔdoeA. As a result, the Mrp-deficient strain could synthesize equal amount of ectoine (around 7 g L-1 or 500 mg (g DCW) -1) in the medium containing lower concentration of NaCl. During a fed-batch fermentation process with 60 g L-1 NaCl stress, a maximum 10.5 g L-1 ectoine was accumulated by the Mrp-deficient strain, with a specific production of 765 mg (g DCW)-1 and a yield of 0.21 g g-1 monosodium glutamate. CONCLUSION: The remarkably enhanced production of ectoine by Y2/ΔectD/ΔdoeA implied the critical function of Doe pathway in the ectoine catabolism. Moreover, the reduced salinity requirement of Mrp-deficient strain implied a feasible protocol for many compatible solute biosynthesis, i.e., by silencing some Na+/H+ antiporters in their halophilic producers and thus lowering the medium salinity.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Proteínas Bacterianas/metabolismo , Halomonas/metabolismo , Microorganismos Modificados Genéticamente/metabolismo , Fermentación , Salinidad , Cloruro de Sodio/metabolismo
15.
Microbiology (Reading) ; 165(4): 411-418, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30777817

RESUMEN

In most halophiles, K+ generally acts as a major osmotic solute for osmotic adjustment and pH homeostasis. However, strains also need to extrude excessive intracellular K+ to avoid its toxicity. In the halotolerant and alkaliphilic Halomonas sp. Y2, an Na+-induced K+ extrusion process was observed when the cells were confronted with high extracellular K+ pressure and supplementation by millimolar Na+ ions. Among three mechanosensitive channels (KefA) and two K+/H+ antiporters founded in the genome of the strain, ke1 displayed around 3-5-fold upregulation to ion stress at pH 8.0, while much higher upregulation of Ha-mrp was observed at pH 10.0. Compared to the growth of wild-type Halomonas sp. Y2, deletion of these genes from the strain resulted in different growth phenotypes in response to the osmotic pressure of potassium. In combination with the transcriptional response of these genes, we proposed that the KefA channel of Ke1 is the main contributor to the K+-extrusion process under weak alkalinity, while the Mrp system plays critical roles in alleviating K+ contents at high pH. The combination of these strategies allows Halomonas sp. Y2 to grow over a range of extracellular pH and ion concentrations, and thus protect cells under high osmotic stress conditions.


Asunto(s)
Halomonas/fisiología , Potasio/metabolismo , Sodio/metabolismo , Proteínas Bacterianas/genética , Medios de Cultivo/química , Perfilación de la Expresión Génica , Halomonas/efectos de los fármacos , Halomonas/genética , Halomonas/crecimiento & desarrollo , Concentración de Iones de Hidrógeno , Presión Osmótica , Potasio/farmacología , Canales de Potasio/genética , Antiportadores de Potasio-Hidrógeno/genética , Eliminación de Secuencia , Sodio/análisis , Intercambiadores de Sodio-Hidrógeno/genética
16.
RSC Adv ; 9(15): 8650-8653, 2019 Mar 12.
Artículo en Inglés | MEDLINE | ID: mdl-35518657

RESUMEN

Layered perovskite oxides have attracted considerable attention due to their potential application in photoelectricity and catalysis. The unique character of layered perovskites as ion-exchange materials provides the possibility of creating structural diversity. A new ion-exchange reaction in aqueous solution was observed in layered oxide gamma-Bi4V2O11. When employed in ion exchange, gamma-Bi4V2O11 is converted into the scheelite-type phase (ABO4) by selectively discarding Aurivillius-type sheets, and is also converted into the A2X3 phase by selectively dissolving perovskite-like layers. Metal-doped BiVO4 and Bi2O3 were obtained using such an ion-exchange reaction.

17.
Wounds ; 31(1): 7-14, 2019 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-30372417

RESUMEN

INTRODUCTION: Chronic, nonhealing skin ulcers of the lower limbs associated with diabetes pose a clinical challenge as their treatment requires more sophisticated and delicate approaches than in patients without diabetes. OBJECTIVE: Herein, the authors demonstrate and discuss the implementation of their use of topical traditional Chinese medicines in several sample cases of lower limb nonhealing ulcers in patients with diabetes. MATERIALS AND METHODS: A series of diabetic ulcer cases were treated with various approaches. First, the approach employed with each patient was determined based on ulcer location, depth, inflammatory extent, and local circulation. Next, an exploratory incision was performed to evaluate eschar condition. Finally, the therapy applied was modified depending on specific case characteristics. RESULTS: The primary therapeutic approaches employed were: (1) selective partial ablation, including fenestration and encroachment; (2) debridement, which avoids secondary injury when local circulation is good; and (3) the turning-over method, in which necrotic tissue is cleaned down to the basal layer via application of a topical Chinese medicine that reduces inflammation and promotes chronic ulcer healing. CONCLUSIONS: These therapeutic approaches alleviated local inflammatory damage and adverse systemic reactions, which is an important basis for further treatment (eg, anti-infection treatment, blood glucose reduction, blood pressure control, organ function improvement, circulation promotion, and nutritional support).


Asunto(s)
Técnicas de Ablación , Antiinfecciosos/administración & dosificación , Desbridamiento , Pie Diabético/fisiopatología , Medicina Tradicional China , Infección de la Herida Quirúrgica/fisiopatología , Cicatrización de Heridas/fisiología , Administración Tópica , Anciano , Anciano de 80 o más Años , Pie Diabético/complicaciones , Pie Diabético/terapia , Femenino , Humanos , Masculino , Persona de Mediana Edad , Infección de la Herida Quirúrgica/terapia , Resultado del Tratamiento
18.
J Biotechnol ; 285: 38-41, 2018 Nov 10.
Artículo en Inglés | MEDLINE | ID: mdl-30172782

RESUMEN

Halophilic microorganisms have great potentials towards biotechnological applications. Halomonas hydrothermalis Y2 is a halotolerant and alkaliphilic strain that isolated from the Na+-rich pulp mill wastewater. The strain is dominant in the bacterial community of pulp mill wastewater and exhibits metabolic diversity in utilizing various substrates. Here we present the genome sequence of this strain, which comprises a circular chromosome 3,933,432 bp in size and a GC content of 60.2%. Diverse genes that encoding proteins for compatible solutes synthesis and transport were identified from the genome. With a complete pathway for ectoine synthesis, the strain could produce ectoine from monosodium glutamate and further partially secreted into the medium. In addition, around 20% ectoine was increased by deleting the ectoine hydroxylase (EctD). The genome sequence we report here will provide genetic information regarding adaptive mechanisms of strain Y2 to its harsh habitat, as well as facilitate exploration of metabolic strategies for diverse compatible solutes, e.g., ectoine production.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Genoma Bacteriano , Halomonas/genética , Halomonas/metabolismo , Concentración de Iones de Hidrógeno , Residuos Industriales , Papel , Salinidad , Glutamato de Sodio/metabolismo , Aguas Residuales
19.
Mol Cell Probes ; 36: 36-42, 2017 12.
Artículo en Inglés | MEDLINE | ID: mdl-28826997

RESUMEN

We developed a new assay method, which combines loop-mediated isothermal amplification (LAMP) with a chromatographic lateral flow dipstick (LFD) for the rapid and special detection of the diatom Skeletonema costatum. Four groups of LAMP primers were derived from a conserved DNA sequence unique to S. costatum. The amplifications were carried out at 61, 63, and 65 °C for 60 min in various combinations by the quantitative PCR thermal cycler to confirm optimal primers and reaction temperature. The LAMP-LFD detection limit was 0.94 pg/µL of S. costatum genomic DNA and was 100 times more sensitive than conventional PCR. The LAMP-LFD method had high specificity and accurately identified S. costatum algal isolates, but not other algal isolates. The new LAMP-LFD assay can be used as a reliable and easy method to detect S. costatum.


Asunto(s)
Cromatografía/métodos , Diatomeas/aislamiento & purificación , Bioensayo , Cartilla de ADN/metabolismo , Técnicas de Amplificación de Ácido Nucleico/métodos , Sensibilidad y Especificidad
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