16S rRNA metagenomic profiling of red amaranth grown organically with different composts and soils.

In recent years organic food is gaining popularity as it is believed to promote better human health and improve soil sustainability, but there are apprehensions about pathogens in organic produces. This study was designed to understand the effect of different composts and soils on the status of the microbiome present in organically grown leafy vegetables. 16S rRNA metagenomic profiling of the leaves was done, and data were analyzed. It was found that by adding composts, the OTU of the microbiome in the organic produce was higher than in the conventional produce. The beneficial genera identified across the samples included plant growth promoters (Achromobacter, Paenibacillus, Pseudomonas, Sphingobacterium) and probiotics (Lactobacillus), which were higher in the organic produce. Some pathogenic genera, viz., plant pathogenic bacteria (Cellvibrio, Georgenia) and human pathogenic bacteria (Corynebacterium, Acinetobacter, Streptococcus, Streptomyces) were also found but with relatively low counts in the organic produce. Thus, the present study highlights that organic produce has lesser pathogen contamination than the conventional produce. KEY POINTS: • 16S rRNA metagenomics profiling done for organic red amaranth cultivar • Microbial richness varied with respect to the soil and compost type used • The ratio of beneficial to pathogenic genera improves with the addition of compost.

Formation and characterization of leaf waste into organic compost.

In solid waste management, pollution-free disposal of leaf waste in urban areas is still not standardized and adopted. According to the World Bank report, 57% of wastes generated in South East Asia are consisted of food and green waste, which can be recycled into valuable bio-compost. The present study shows a method of leaf litter waste management by composting it using essential microbe (EM) method. Different parameters, such as pH, electrical conductivity, macronutrients, micronutrients, and potentially toxic elements (PTE) were measured at zero to 50 days of composting using appropriate methods. The microbial composting was shown to mature within 20 to 40 days, and its maturity could be evaluated by the attainment of stable pH (8), electrical conductivity (0.9 mS/cm), and C:N ratio ≥ 20. The analysis was also performed on other bio-composts viz. kitchen waste compost, vermicompost, cow dung manure, municipal organic waste compost, and neem cake compost. The fertility index (FI) was evaluated based on six parameters viz. total carbon, total nitrogen, N ratio, phosphorus, potassium, and sulphur contents. The PTE values were used to calculate their clean index (CI). The results showed that leaf waste compost has a higher fertility index (FI = 4.06) than other bio-composts, except the neem cake compost (FI = 4.44). The clean index of the leaf waste compost (CI = 4.38) was also higher than other bio-composts. This indicates that leaf waste compost is a valuable bio-resource with high nutritive value and low PTE contamination, with a favourable prospective to be used in organic farming.