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1.
Traffic ; 18(10): 658-671, 2017 10.
Article En | MEDLINE | ID: mdl-28731566

The kinesin family proteins are often studied as prototypical molecular motors; a deeper understanding of them can illuminate regulation of intracellular transport. It is typically assumed that they function identically. Here we find that this assumption of homogeneous function appears incorrect: variation among motors' velocities in vivo and in vitro is larger than the stochastic variation expected for an ensemble of "identical" motors. When moving on microtubules, slow and fast motors are persistently slow, and fast, respectively. We develop theory that provides quantitative criteria to determine whether the observed single-molecule variation is too large to be generated from an ensemble of identical molecules. To analyze such heterogeneity, we group traces into homogeneous sub-ensembles. Motility studies varying the temperature, pH and glycerol concentration suggest at least 2 distinct functional states that are independently affected by external conditions. We end by investigating the functional ramifications of such heterogeneity through Monte-Carlo multi-motor simulations.


Drosophila Proteins/metabolism , Kinesins/metabolism , Molecular Dynamics Simulation , Animals , Cell Line, Tumor , Drosophila , Drosophila Proteins/chemistry , Humans , Kinesins/chemistry , Motion , Protein Domains
2.
Biophys J ; 107(6): 1474-84, 2014 Sep 16.
Article En | MEDLINE | ID: mdl-25229154

There is significant interest in quantifying force production inside cells, but since conditions in vivo are less well controlled than those in vitro, in vivo measurements are challenging. In particular, the in vivo environment may vary locally as far as its optical properties, and the organelles manipulated by the optical trap frequently vary in size and shape. Several methods have been proposed to overcome these difficulties. We evaluate the relative merits of these methods and directly compare two of them, a refractive index matching method, and a light-momentum-change method. Since in vivo forces are frequently relatively high (e.g., can exceed 15 pN for lipid droplets), a high-power laser is employed. We discover that this high-powered trap induces local temperature changes, and we develop an approach to compensate for uncertainties in the magnitude of applied force due to such temperature variations.


Mechanical Phenomena , Optical Tweezers , Adenosine Triphosphate/metabolism , Calibration , HEK293 Cells , Humans , Hydrolysis , Kinesins/metabolism , Temperature
3.
Proc Natl Acad Sci U S A ; 111(19): 7000-5, 2014 May 13.
Article En | MEDLINE | ID: mdl-24782540

Kinesin is the canonical plus-end microtubule motor and has been the focus of intense study since its discovery in 1985. We previously demonstrated a time-dependent inactivation of kinesin in vitro that was fully reversible by the addition of purified casein kinase 2 (CK2) and showed that this inactivation/reactivation pathway was relevant in cells. Here we show that kinesin inactivation results from a conformational change that causes the neck linker to be positioned closer to the motor domain. Furthermore, we show that treatment of kinesin with CK2 prevents and reverses this repositioning. Finally, we demonstrate that CK2 treatment facilitates ADP dissociation from the motor, resulting in a nucleotide-free state that promotes microtubule binding. Thus, we propose that kinesin inactivation results from neck-linker repositioning and that CK2-mediated reactivation results from CK2's dual ability to reverse this repositioning and to promote ADP release.


Casein Kinase II/chemistry , Casein Kinase II/metabolism , Kinesins/chemistry , Kinesins/metabolism , Signal Transduction/physiology , Adenosine Diphosphate/metabolism , Adenosine Triphosphate/metabolism , Animals , Enzyme Activation/physiology , Humans , Microtubules/physiology , Models, Molecular , Protein Structure, Tertiary
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