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1.
PLoS One ; 19(5): e0294998, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38713688

RESUMEN

Tularemia is a zoonotic disease caused by the facultative intracellular gram-negative bacterium Francisella tularensis. F. tularensis has a very low infection dose by the aerosol route which can result in an acute, and potentially lethal, infection in humans. Consequently, it is classified as a Category A bioterrorism agent by the US Centers for Disease Control (CDC) and is a pathogen of concern for the International Biodefence community. There are currently no licenced tularemia vaccines. In this study we report on the continued assessment of a tularemia subunit vaccine utilising ß-glucan particles (GPs) as a vaccine delivery platform for immunogenic F. tularensis antigens. Using a Fischer 344 rat infection model, we demonstrate that a GP based vaccine comprising the F. tularensis lipopolysaccharide antigen together with the protein antigen FTT0814 provided partial protection of F344 rats against an aerosol challenge with a high virulence strain of F. tularensis, SCHU S4. Inclusion of imiquimod as an adjuvant failed to enhance protective efficacy. Moreover, the level of protection afforded was dependant on the challenge dose. Immunological characterisation of this vaccine demonstrated that it induced strong antibody immunoglobulin responses to both polysaccharide and protein antigens. Furthermore, we demonstrate that the FTT0814 component of the GP vaccine primed CD4+ and CD8+ T-cells from immunised F344 rats to express interferon-γ, and CD4+ cells to express interleukin-17, in an antigen specific manner. These data demonstrate the development potential of this tularemia subunit vaccine and builds on a body of work highlighting GPs as a promising vaccine platform for difficult to treat pathogens including those of concern to the bio-defence community.


Asunto(s)
Vacunas Bacterianas , Modelos Animales de Enfermedad , Francisella tularensis , Ratas Endogámicas F344 , Tularemia , Vacunas de Subunidad , Animales , Tularemia/prevención & control , Tularemia/inmunología , Ratas , Vacunas Bacterianas/inmunología , Vacunas Bacterianas/administración & dosificación , Francisella tularensis/inmunología , Vacunas de Subunidad/inmunología , Vacunas de Subunidad/administración & dosificación , Glucanos/inmunología , Glucanos/farmacología , Linfocitos T/inmunología , Femenino , Antígenos Bacterianos/inmunología
2.
Front Microbiol ; 14: 1113642, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37213513

RESUMEN

Bacillus cereus G9241 was isolated from a welder who survived a pulmonary anthrax-like disease. Strain G9241 carries two virulence plasmids, pBCX01 and pBC210, as well as an extrachromosomal prophage, pBFH_1. pBCX01 has 99.6% sequence identity to pXO1 carried by Bacillus anthracis and encodes the tripartite anthrax toxin genes and atxA, a mammalian virulence transcriptional regulator. This work looks at how the presence of pBCX01 and temperature may affect the lifestyle of B. cereus G9241 using a transcriptomic analysis and by studying spore formation, an important part of the B. anthracis lifecycle. Here we report that pBCX01 has a stronger effect on gene transcription at the mammalian infection relevant temperature of 37°C in comparison to 25°C. At 37°C, the presence of pBCX01 appears to have a negative effect on genes involved in cell metabolism, including biosynthesis of amino acids, whilst positively affecting the transcription of many transmembrane proteins. The study of spore formation showed B. cereus G9241 sporulated rapidly in comparison to the B. cereus sensu stricto type strain ATCC 14579, particularly at 37°C. The carriage of pBCX01 did not affect this phenotype suggesting that other genetic elements were driving rapid sporulation. An unexpected finding of this study was that pBFH_1 is highly expressed at 37°C in comparison to 25°C and pBFH_1 expression leads to the production of Siphoviridae-like phage particles in the supernatant of B. cereus G9241. This study provides an insight on how the extrachromosomal genetic elements in B. cereus G9241 has an influence in bacterial phenotypes.

3.
Front Microbiol ; 14: 1113562, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-36937299

RESUMEN

Bacillus cereus G9241 was isolated from a Louisiana welder suffering from an anthrax-like infection. The organism carries two transcriptional regulators that have previously been proposed to be incompatible with each other in Bacillus anthracis: the pleiotropic transcriptional regulator PlcR found in most members of the Bacillus cereus group but truncated in all B. anthracis isolates, and the anthrax toxin regulator AtxA found in all B. anthracis strains and a few B. cereus sensu stricto strains. Here we report cytotoxic and hemolytic activity of cell free B. cereus G9241 culture supernatants cultured at 25°C to various eukaryotic cells. However, this is not observed at the mammalian infection relevant temperature 37°C, behaving much like the supernatants generated by B. anthracis. Using a combination of genetic and proteomic approaches to understand this unique phenotype, we identified several PlcR-regulated toxins to be secreted highly at 25°C compared to 37°C. Furthermore, results suggest that differential expression of the protease involved in processing the PlcR quorum sensing activator molecule PapR appears to be the limiting step for the production of PlcR-regulated toxins at 37°C, giving rise to the temperature-dependent hemolytic and cytotoxic activity of the culture supernatants. This study provides an insight on how B. cereus G9241 is able to "switch" between B. cereus and B. anthracis-like phenotypes in a temperature-dependent manner, potentially accommodating the activities of both PlcR and AtxA.

4.
J Microbiol Methods ; 176: 106004, 2020 09.
Artículo en Inglés | MEDLINE | ID: mdl-32687866

RESUMEN

The clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated protein 9 (Cas9) system is a powerful tool for gene editing in eukaryotic genomes but is still being developed for editing bacterial genomes. Here we describe the construction of an all-in-one vector for generating potentially scarless deletion mutants in Francisella tularensis LVS using a CRISPR-Cas9-based system.


Asunto(s)
Sistemas CRISPR-Cas , Francisella tularensis/genética , Edición Génica/métodos , Genoma Bacteriano
5.
Dalton Trans ; 49(2): 511-523, 2020 Jan 02.
Artículo en Inglés | MEDLINE | ID: mdl-31844857

RESUMEN

A series of six different 1,8-naphthalimide conjugated dipicolylamine ligands (L1-6) have been synthesised and characterised. The ligands possess a range of different linker units between the napthalimide fluorophore and dipcolylamine chelator which allow the overall lipophilicity to be tuned. A corresponding series of Re(i) complexes have been synthesised of the form fac-[Re(CO)3(L1-6)]BF4. The absorption and luminescence properties of the ligands and Re(i) complexes were dominated by the intramolecular charge transfer character of the substituted fluorophore (typically absorption ca. 425 nm and emission ca. 520 nm). Photophysical assessments show that some of the variants are moderately bright. Radiolabelling experiments using a water soluble ligand variant (L5) were successfully undertaken and optimised with fac-[99mTc(CO)3(H2O)3]+. Confocal fluorescence microscopy showed that fac-[Re(CO)3(L5)]+ localises in the mitochondria of MCF-7 cells. SPECT/CT imaging experiments on naïve mice showed that fac-[99mTc(CO)3(L5)]+ has a relatively high stability in vivo but did not show any cardiac uptake, demonstrating rapid clearance, predominantly via the biliary system along with a moderate amount cleared renally.


Asunto(s)
Medios de Contraste/química , Complejos de Coordinación/química , Mitocondrias/patología , Naftalimidas/química , Compuestos de Organotecnecio/química , Aminas/química , Animales , Sistema Biliar/diagnóstico por imagen , Supervivencia Celular/efectos de los fármacos , Complejos de Coordinación/síntesis química , Complejos de Coordinación/farmacología , Femenino , Humanos , Marcaje Isotópico , Ligandos , Células MCF-7 , Ratones , Ratones Desnudos , Microscopía Confocal , Ácidos Picolínicos/química , Renio/química , Tomografía Computarizada de Emisión de Fotón Único , Tomografía Computarizada por Rayos X
6.
Microb Genom ; 5(11)2019 11.
Artículo en Inglés | MEDLINE | ID: mdl-31580793

RESUMEN

Yersinia pseudotuberculosis is a Gram-negative bacterium capable of causing gastrointestinal infection and is closely related to the highly virulent plague bacillus Yersinia pestis. Infections by both species are currently treatable with antibiotics such as ciprofloxacin, a quinolone-class drug of major clinical importance in the treatment of many other infections. Our current understanding of the mechanism of action of ciprofloxacin is that it inhibits DNA replication by targeting DNA gyrase, and that resistance is primarily due to mutation of this target site, along with generic efflux and detoxification strategies. We utilized transposon-directed insertion site sequencing (TraDIS or TnSeq) to identify the non-essential chromosomal genes in Y. pseudotuberculosis that are required to tolerate sub-lethal concentrations of ciprofloxacin in vitro. As well as highlighting recognized antibiotic resistance genes, we provide evidence that multiple genes involved in regulating DNA replication and repair are central in enabling Y. pseudotuberculosis to tolerate the antibiotic, including DksA (yptb0734), a regulator of RNA polymerase, and Hda (yptb2792), an inhibitor of DNA replication initiation. We furthermore demonstrate that even at sub-lethal concentrations, ciprofloxacin causes severe cell-wall stress, requiring lipopolysaccharide lipid A, O-antigen and core biosynthesis genes to resist the sub-lethal effects of the antibiotic. It is evident that coping with the consequence(s) of antibiotic-induced stress requires the contribution of scores of genes that are not exclusively engaged in drug resistance.


Asunto(s)
Ciprofloxacina/farmacología , Farmacorresistencia Microbiana/genética , Yersinia pseudotuberculosis/genética , Antiinfecciosos/farmacología , Secuencia de Bases/genética , Cromosomas/genética , Ciprofloxacina/metabolismo , Reparación del ADN/genética , Replicación del ADN/genética , Evolución Molecular , Genoma Bacteriano , Mutación , Virulencia/genética , Factores de Virulencia/genética , Yersinia pestis/genética , Yersinia pestis/metabolismo , Yersinia pseudotuberculosis/metabolismo , Infecciones por Yersinia pseudotuberculosis/microbiología
7.
Sci Rep ; 9(1): 7225, 2019 05 10.
Artículo en Inglés | MEDLINE | ID: mdl-31076594

RESUMEN

With the rise of antimicrobial resistance, novel ways to treat bacterial infections are required and the use of predatory bacteria may be one such approach. Bdellovibrio species have been shown in vitro to predate on a wide range of other Gram-negative bacteria, including CDC category A/B pathogens such as Yersinia pestis. The data reported here show that treatment of SKH-1 mice with Bdellovibrio bacteriovorus HD100 provided significant protection from a lethal challenge of Yersinia pestis CO92. This is the first report of protection conferred by predation in vivo against a systemic pathogen challenge. However, this protective effect was not observed in a preliminary study with Balb/c mice. Therefore the effects of the predatory bacteria are complex and may be dependent on immune status/genetics of the host. Overall, predatory bacteria may have utility as a therapeutic modality but further work is required to understand the predator-host interaction.


Asunto(s)
Bdellovibrio bacteriovorus/fisiología , Peste/prevención & control , Yersinia pestis/patogenicidad , Animales , Modelos Animales de Enfermedad , Macrófagos/inmunología , Ratones , Ratones Endogámicos BALB C , Ratones Endogámicos C57BL , Imagen Óptica , Fagocitosis , Peste/microbiología , Peste/patología
8.
PLoS One ; 13(10): e0200213, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30296254

RESUMEN

Francisella tularensis is an intracellular pathogen causing the disease tularemia, and an organism of concern to biodefence. There is no licensed vaccine available. Subunit approaches have failed to induce protection, which requires both humoral and cellular immune memory responses, and have been hampered by a lack of understanding as to which antigens are immunoprotective. We undertook a preliminary in silico analysis to identify candidate protein antigens. These antigens were then recombinantly expressed and encapsulated into glucan particles (GPs), purified Saccharomyces cerevisiae cell walls composed primarily of ß-1,3-glucans. Immunological profiling in the mouse was used to down-selection to seven lead antigens: FTT1043 (Mip), IglC, FTT0814, FTT0438, FTT0071 (GltA), FTT0289, FTT0890 (PilA) prior to transitioning their evaluation to a Fischer 344 rat model for efficacy evaluation. F344 rats were vaccinated with the GP protein antigens co-delivered with GP-loaded with Francisella LPS. Measurement of cell mediated immune responses and computational epitope analysis allowed down-selection to three promising candidates: FTT0438, FTT1043 and FTT0814. Of these, a GP vaccine delivering Francisella LPS and the FTT0814 protein was able to induce protection in rats against an aerosol challenge of F. tularensis SchuS4, and reduced organ colonisation and clinical signs below that which immunisation with a GP-LPS alone vaccine provided. This is the first report of a protein supplementing protection induced by LPS in a Francisella vaccine. This paves the way for developing an effective, safe subunit vaccine for the prevention of inhalational tularemia, and validates the GP platform for vaccine delivery where complex immune responses are required for prevention of infections by intracellular pathogens.


Asunto(s)
Vacunas Bacterianas/inmunología , Francisella tularensis , Glucanos/química , Tularemia/prevención & control , Animales , Técnicas de Cocultivo , Glucanos/administración & dosificación , Inmunidad Celular , Macrófagos/metabolismo , Ratones , Ratones Endogámicos BALB C , Ratones Endogámicos C57BL , Ratas , Ratas Endogámicas F344 , Saccharomyces cerevisiae , Tularemia/inmunología , Vacunas Atenuadas/inmunología , Vacunas de Subunidad/inmunología
9.
Proc Natl Acad Sci U S A ; 115(13): 3350-3355, 2018 03 27.
Artículo en Inglés | MEDLINE | ID: mdl-29531036

RESUMEN

Inorganic polyphosphate is a ubiquitous, linear biopolymer built of up to thousands of phosphate residues that are linked by energy-rich phosphoanhydride bonds. Polyphosphate kinases of the family 2 (PPK2) use polyphosphate to catalyze the reversible phosphorylation of nucleotide phosphates and are highly relevant as targets for new pharmaceutical compounds and as biocatalysts for cofactor regeneration. PPK2s can be classified based on their preference for nucleoside mono- or diphosphates or both. The detailed mechanism of PPK2s and the molecular basis for their substrate preference is unclear, which is mainly due to the lack of high-resolution structures with substrates or substrate analogs. Here, we report the structural analysis and comparison of a class I PPK2 (ADP-phosphorylating) and a class III PPK2 (AMP- and ADP-phosphorylating), both complexed with polyphosphate and/or nucleotide substrates. Together with complementary biochemical analyses, these define the molecular basis of nucleotide specificity and are consistent with a Mg2+ catalyzed in-line phosphoryl transfer mechanism. This mechanistic insight will guide the development of PPK2 inhibitors as potential antibacterials or genetically modified PPK2s that phosphorylate alternative substrates.


Asunto(s)
Deinococcus/enzimología , Fosfotransferasas (Aceptor del Grupo Fosfato)/química , Fosfotransferasas (Aceptor del Grupo Fosfato)/metabolismo , Polifosfatos/metabolismo , Cristalografía por Rayos X , Cinética , Ligandos , Fosforilación , Conformación Proteica , Especificidad por Sustrato
10.
Microbiology (Reading) ; 163(11): 1664-1679, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-29034854

RESUMEN

During conditions of nutrient limitation bacteria undergo a series of global gene expression changes to survive conditions of amino acid and fatty acid starvation. Rapid reallocation of cellular resources is brought about by gene expression changes coordinated by the signalling nucleotides' guanosine tetraphosphate or pentaphosphate, collectively termed (p)ppGpp and is known as the stringent response. The stringent response has been implicated in bacterial virulence, with elevated (p)ppGpp levels being associated with increased virulence gene expression. This has been observed in the highly pathogenic Francisella tularensis sub spp. tularensis SCHU S4, the causative agent of tularaemia. Here, we aimed to artificially induce the stringent response by culturing F. tularensis in the presence of the amino acid analogue l-serine hydroxamate. Serine hydroxamate competitively inhibits tRNAser aminoacylation, causing an accumulation of uncharged tRNA. The uncharged tRNA enters the A site on the translating bacterial ribosome and causes ribosome stalling, in turn stimulating the production of (p)ppGpp and activation of the stringent response. Using the essential virulence gene iglC, which is encoded on the Francisella pathogenicity island (FPI) as a marker of active stringent response, we optimized the culture conditions required for the investigation of virulence gene expression under conditions of nutrient limitation. We subsequently used whole genome RNA-seq to show how F. tularensis alters gene expression on a global scale during active stringent response. Key findings included up-regulation of genes involved in virulence, stress responses and metabolism, and down-regulation of genes involved in metabolite transport and cell division. F. tularensis is a highly virulent intracellular pathogen capable of causing debilitating or fatal disease at extremely low infectious doses. However, virulence mechanisms are still poorly understood. The stringent response is widely recognized as a diverse and complex bacterial stress response implicated in virulence. This work describes the global gene expression profile of F. tularensis SCHU S4 under active stringent response for the first time. Herein we provide evidence for an association of active stringent response with FPI virulence gene expression. Our results further the understanding of the molecular basis of virulence and regulation thereof in F. tularensis. These results also support research into genes involved in (p)ppGpp production and polyphosphate biosynthesis and their applicability as targets for novel antimicrobials.


Asunto(s)
Adaptación Biológica/fisiología , Francisella tularensis/fisiología , Regulación Bacteriana de la Expresión Génica/fisiología , Islas Genómicas/genética , Transcriptoma/fisiología , Virulencia/fisiología , Proteínas Bacterianas/biosíntesis , Proteínas Bacterianas/genética , Francisella tularensis/genética , Francisella tularensis/patogenicidad , Regulación Bacteriana de la Expresión Génica/genética , Genes Bacterianos/genética , Genes Reguladores/genética , Genes Reguladores/fisiología , Islas Genómicas/fisiología , Secuenciación de Nucleótidos de Alto Rendimiento , Redes y Vías Metabólicas/genética , Redes y Vías Metabólicas/fisiología , Estrés Oxidativo/genética , Estrés Oxidativo/fisiología , Proteoma/fisiología , Análisis de Secuencia de ARN , Serina/análogos & derivados , Serina/toxicidad , Estrés Fisiológico , Activación Transcripcional/genética , Activación Transcripcional/fisiología , Transcriptoma/genética , Virulencia/genética
11.
BMC Microbiol ; 17(1): 163, 2017 Jul 21.
Artículo en Inglés | MEDLINE | ID: mdl-28732479

RESUMEN

BACKGROUND: The World Health Organization has categorized plague as a re-emerging disease and the potential for Yersinia pestis to also be used as a bioweapon makes the identification of new drug targets against this pathogen a priority. Environmental temperature is a key signal which regulates virulence of the bacterium. The bacterium normally grows outside the human host at 28 °C. Therefore, understanding the mechanisms that the bacterium used to adapt to a mammalian host at 37 °C is central to the development of vaccines or drugs for the prevention or treatment of human disease. RESULTS: Using a library of over 1 million Y. pestis CO92 random mutants and transposon-directed insertion site sequencing, we identified 530 essential genes when the bacteria were cultured at 28 °C. When the library of mutants was subsequently cultured at 37 °C we identified 19 genes that were essential at 37 °C but not at 28 °C, including genes which encode proteins that play a role in enabling functioning of the type III secretion and in DNA replication and maintenance. Using genome-scale metabolic network reconstruction we showed that growth conditions profoundly influence the physiology of the bacterium, and by combining computational and experimental approaches we were able to identify 54 genes that are essential under a broad range of conditions. CONCLUSIONS: Using an integrated computational-experimental approach we identify genes which are required for growth at 37 °C and under a broad range of environments may be the best targets for the development of new interventions to prevent or treat plague in humans.


Asunto(s)
Proteínas Bacterianas/genética , Biología Computacional/métodos , Genes Esenciales , Peste/microbiología , Yersinia pestis/genética , Proteínas Bacterianas/metabolismo , Regulación Bacteriana de la Expresión Génica , Humanos , Mutación , Yersinia pestis/crecimiento & desarrollo , Yersinia pestis/metabolismo
12.
Sci Rep ; 7(1): 3104, 2017 06 08.
Artículo en Inglés | MEDLINE | ID: mdl-28596569

RESUMEN

The protein-protein interaction between the human CMG2 receptor and the Bacillus anthracis protective antigen (PA) is essential for the transport of anthrax lethal and edema toxins into human cells. We used a genetically encoded high throughput screening platform to screen a SICLOPPS library of 3.2 million cyclic hexapeptides for inhibitors of this protein-protein interaction. Unusually, the top 3 hits all contained stop codons in the randomized region of the library, resulting in linear rather than cyclic peptides. These peptides disrupted the targeted interaction in vitro; two act by binding to CMG2 while one binds PA. The efficacy of the most potent CMG2-binding inhibitor was improved through the incorporation of non-natural phenylalanine analogues. Cell based assays demonstrated that the optimized inhibitor protects macrophages from the toxicity of lethal factor.


Asunto(s)
Antibacterianos/farmacología , Antígenos Bacterianos/metabolismo , Bacillus anthracis/efectos de los fármacos , Bacillus anthracis/fisiología , Toxinas Bacterianas/metabolismo , Receptores de Péptidos/metabolismo , Animales , Línea Celular Tumoral , Descubrimiento de Drogas/métodos , Unión Proteica/efectos de los fármacos
13.
Sci Rep ; 7: 41923, 2017 02 06.
Artículo en Inglés | MEDLINE | ID: mdl-28165493

RESUMEN

Massively parallel sequencing technology coupled with saturation mutagenesis has provided new and global insights into gene functions and roles. At a simplistic level, the frequency of mutations within genes can indicate the degree of essentiality. However, this approach neglects to take account of the positional significance of mutations - the function of a gene is less likely to be disrupted by a mutation close to the distal ends. Therefore, a systematic bioinformatics approach to improve the reliability of essential gene identification is desirable. We report here a parametric model which introduces a novel mutation feature together with a noise trimming approach to predict the biological significance of Tn5 mutations. We show improved performance of essential gene prediction in the bacterium Yersinia pestis, the causative agent of plague. This method would have broad applicability to other organisms and to the identification of genes which are essential for competitiveness or survival under a broad range of stresses.


Asunto(s)
Proteínas Bacterianas/genética , Genes Esenciales , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Mutación , Peste/microbiología , Yersinia pestis/crecimiento & desarrollo , Yersinia pestis/genética , Biología Computacional , Regulación Bacteriana de la Expresión Génica , Genoma Bacteriano , Fenotipo , Virulencia
14.
BMC Microbiol ; 16(1): 282, 2016 11 25.
Artículo en Inglés | MEDLINE | ID: mdl-27887582

RESUMEN

BACKGROUND: Although bacterial peptidases are known to be produced by various microorganisms, including pathogenic bacteria, their role in bacterial physiology is not fully understood. In particular, oligopeptidases are thought to be mainly involved in degradation of short peptides e.g. leader peptides released during classical protein secretion pathways. The aim of this study was to investigate effects of inactivation of an oligopeptidase encoding gene opdA gene of Yersinia pseudotuberculosis on bacterial properties in vivo and in vitro, and to test dependence of the enzymatic activity of the respective purified enzyme on the presence of different divalent cations. RESULTS: In this study we found that oligopeptidase OpdA of Yersinia pseudotuberculosis is required for bacterial virulence, whilst knocking out the respective gene did not have any effect on bacterial viability or growth rate in vitro. In addition, we studied enzymatic properties of this enzyme after expression and purification from E. coli. Using an enzyme depleted of contaminant divalent cations and different types of fluorescently labelled substrates, we found strong dependence of its activity on the presence of particular cations. Unexpectedly, Zn2+ showed stimulatory activity only at low concentrations, but inhibited the enzyme at higher concentrations. In contrast, Co2+, Ca2+ and Mn2+ stimulated activity at all concentrations tested, whilst Mg2+ revealed no effect on the enzyme activity at all concentrations used. CONCLUSIONS: The results of this study provide valuable contribution to the investigation of bacterial peptidases in general, and that of metallo-oligopeptidases in particular. This is the first study demonstrating that opdA in Yersinia pseudotuberculsosis is required for pathogenicity. The data reported are important for better understanding of the role of OpdA-like enzymes in pathogenesis in bacterial infections. Characterisation of this protein may serve as a basis for the development of novel antibacterials based on specific inhibition of this peptidase activity.


Asunto(s)
Proteínas Bacterianas/genética , Péptido Hidrolasas/genética , Virulencia/genética , Yersinia pseudotuberculosis/enzimología , Yersinia pseudotuberculosis/genética , Yersinia pseudotuberculosis/patogenicidad , Proteínas Bacterianas/efectos de los fármacos , Calcio/administración & dosificación , Calcio/farmacología , Cationes , Cobalto/administración & dosificación , Cobalto/farmacología , Activación Enzimática/efectos de los fármacos , Pruebas de Enzimas , Escherichia coli/genética , Escherichia coli/metabolismo , Regulación Bacteriana de la Expresión Génica , Técnicas de Silenciamiento del Gen , Genes Bacterianos , Concentración de Iones de Hidrógeno , Hidrólisis , Magnesio/administración & dosificación , Magnesio/farmacología , Manganeso/administración & dosificación , Manganeso/farmacología , Metaloproteasas/efectos de los fármacos , Metaloproteasas/genética , Metaloproteasas/metabolismo , Viabilidad Microbiana , Mutación , Péptido Hidrolasas/efectos de los fármacos , Péptido Hidrolasas/metabolismo , Factores de Virulencia/genética , Yersinia pseudotuberculosis/crecimiento & desarrollo , Infecciones por Yersinia pseudotuberculosis/microbiología , Zinc/administración & dosificación , Zinc/farmacología
15.
Biosci Rep ; 36(1): e00294, 2015 Nov 18.
Artículo en Inglés | MEDLINE | ID: mdl-26582818

RESUMEN

The metabolism of polyphosphate is important for the virulence of a wide range of pathogenic bacteria and the enzymes of polyphosphate metabolism have been proposed as an anti-bacterial target. In the intracellular pathogen Francisella tularensis, the product of the gene FTT1564 has been identified as a polyphosphate kinase from the polyphosphate kinase 2 (PPK2) family. The isogenic deletion mutant was defective for intracellular growth in macrophages and was attenuated in mice, indicating an important role for polyphosphate in the virulence of Francisella. Herein, we report the biochemical and structural characterization of F. tularensis polyphosphate kinase (FtPPK2) with a view to characterizing the enzyme as a novel target for inhibitors. Using an HPLC-based activity assay, the substrate specificity of FtPPK2 was found to include purine but not pyrimidine nts. The activity was also measured using (31)P-NMR. FtPPK2 has been crystallized and the structure determined to 2.23 Å (1 Å=0.1 nm) resolution. The structure consists of a six-stranded parallel ß-sheet surrounded by 12 α-helices, with a high degree of similarity to other members of the PPK2 family and the thymidylate kinase superfamily. Residues proposed to be important for substrate binding and catalysis have been identified in the structure, including a lid-loop and the conserved Walker A and B motifs. The ΔFTT1564 strain showed significantly increased sensitivity to a range of antibiotics in a manner independent of the mode of action of the antibiotic. This combination of biochemical, structural and microbiological data provide a sound foundation for future studies targeting the development of PPK2 small molecule inhibitors.


Asunto(s)
Proteínas Bacterianas/química , Francisella tularensis/enzimología , Fosfotransferasas (Aceptor del Grupo Fosfato)/química , Animales , Proteínas Bacterianas/metabolismo , Cristalografía por Rayos X , Francisella tularensis/genética , Ratones , Fosfotransferasas (Aceptor del Grupo Fosfato)/genética , Fosfotransferasas (Aceptor del Grupo Fosfato)/metabolismo , Estructura Secundaria de Proteína
16.
Biosci Rep ; 35(6)2015 Oct 08.
Artículo en Inglés | MEDLINE | ID: mdl-26450927

RESUMEN

The bacterial stringent response is induced by nutrient deprivation and is mediated by enzymes of the RSH (RelA/SpoT homologue; RelA, (p)ppGpp synthetase I; SpoT, (p)ppGpp synthetase II) superfamily that control concentrations of the 'alarmones' (p)ppGpp (guanosine penta- or tetra-phosphate). This regulatory pathway is present in the vast majority of pathogens and has been proposed as a potential anti-bacterial target. Current understanding of RelA-mediated responses is based on biochemical studies using Escherichia coli as a model. In comparison, the Francisella tularensis RelA sequence contains a truncated regulatory C-terminal region and an unusual synthetase motif (EXSD). Biochemical analysis of F. tularensis RelA showed the similarities and differences of this enzyme compared with the model RelA from Escherichia coli. Purification of the enzyme yielded a stable dimer capable of reaching concentrations of 10 mg/ml. In contrast with other enzymes from the RelA/SpoT homologue superfamily, activity assays with F. tularensis RelA demonstrate a high degree of specificity for GTP as a pyrophosphate acceptor, with no measurable turnover for GDP. Steady state kinetic analysis of F. tularensis RelA gave saturation activity curves that best fitted a sigmoidal function. This kinetic profile can result from allosteric regulation and further measurements with potential allosteric regulators demonstrated activation by ppGpp (5',3'-dibisphosphate guanosine) with an EC50 of 60±1.9 µM. Activation of F. tularensis RelA by stalled ribosomal complexes formed with ribosomes purified from E. coli MRE600 was observed, but interestingly, significantly weaker activation with ribosomes isolated from Francisella philomiragia.


Asunto(s)
Francisella tularensis/enzimología , Ligasas/metabolismo , Ribosomas/enzimología , Regulación Alostérica/genética , Escherichia coli/enzimología , Cinética , Ligasas/genética
17.
Microbiology (Reading) ; 161(11): 2192-203, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26374246

RESUMEN

The phage-shock protein (Psp) response is an extracytoplasmic response system that is vital for maintenance of the cytoplasmic membrane when the cell encounters stressful conditions. The paradigm of the Psp response has been established in Escherichia coli. The response has been shown to be important for survival during the stationary phase, maintenance of the proton motive force across membranes and implicated in virulence. In this study, we identified a putative PspA homologue in Burkholderia pseudomallei, annotated as BPSL2105. Similar to the induction of PspA in E. coli, the expression of B. pseudomallei BPSL2105 was induced by heat shock. Deletion of BPSL2105 resulted in a survival defect in the late stationary phase coincident with dramatic changes in the pH of the culture medium. The B. pseudomallei BPSL2105 deletion mutant also displayed reduced survival in macrophage infection - the first indication that the Psp response plays a role during intracellular pathogenesis in this species. The purified protein formed large oligomeric structures similar to those observed for the PspA protein of E. coli, and PspA homologues in Bacillus, cyanobacteria and higher plants, providing further evidence to support the identification of BPSL2105 as a PspA-like protein in B. pseudomallei.


Asunto(s)
Proteínas Bacterianas/metabolismo , Burkholderia pseudomallei/fisiología , Proteínas de Choque Térmico/metabolismo , Estrés Fisiológico , Burkholderia pseudomallei/genética , Burkholderia pseudomallei/efectos de la radiación , Medios de Cultivo/química , Eliminación de Gen , Perfilación de la Expresión Génica , Calor , Concentración de Iones de Hidrógeno , Macrófagos/inmunología , Macrófagos/microbiología , Viabilidad Microbiana/efectos de la radiación , Multimerización de Proteína
18.
Microbiology (Reading) ; 160(Pt 12): 2710-2717, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25234474

RESUMEN

Mg(2+) has been shown to be an important signal controlling gene regulation via the PhoPQ two-component regulatory system for a range of Gram-negative bacteria, including Yersinia pestis and Yersinia pseudotuberculosis. The magnesium ion transporter MgtB is part of the complex PhoPQ regulon, being upregulated in response to low Mg(2+). Despite the presence of other Mg(2+) transport systems in Yersinia, inactivation of mgtB had a significant effect on the ability of the bacteria to scavenge this crucial ion. Whereas inactivation of PhoPQ is reported to adversely affect intracellular survival, we show that Y. pestis and Y. pseudotuberculosis ΔmgtB mutants survived equally as well as the respective parent strain within macrophages, although they were more sensitive to killing in the Galleria model of infection. Surprisingly, despite MgtB being only one member of the Mg(2+) stimulon and PhoPQ controlling the expression levels of a range of genes including mgtB, the Yersinia ΔmgtB mutants were more highly attenuated than the equivalent Yersinia ΔphoP mutants in mouse models of infection. MgtB may be a suitable target for development of novel antimicrobials, and investigation of its role may help elucidate the contribution of this component of the PhoPQ regulon to pathogenesis.


Asunto(s)
Proteínas de Transporte de Catión/metabolismo , Magnesio/metabolismo , Factores de Virulencia/metabolismo , Yersinia pestis/crecimiento & desarrollo , Yersinia pestis/metabolismo , Yersinia pseudotuberculosis/crecimiento & desarrollo , Yersinia pseudotuberculosis/metabolismo , Animales , Proteínas de Transporte de Catión/genética , Modelos Animales de Enfermedad , Eliminación de Gen , Lepidópteros/microbiología , Macrófagos/microbiología , Ratones , Viabilidad Microbiana , Virulencia , Factores de Virulencia/genética , Yersiniosis/microbiología , Yersiniosis/patología , Yersinia pestis/genética , Yersinia pseudotuberculosis/genética
19.
PLoS One ; 8(9): e74789, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24098670

RESUMEN

Burkholderia pseudomallei is a dangerous human pathogen. Phosphoantigens specifically the target primate specific γ9(+)δ2(+) T cells subset and some have been developed as potential immunotherapeutics. Previously, we demonstrated that, when stimulated with the phosphoantigen CHDMAPP, γ9(+)δ2(+) T cells aid in the killing of intracellular B. pseudomallei bacteria. Moreover, we found that common marmoset (Callithrix Jacchus) γ9(+) T cells increase in frequency and respond to the phosphoantigen CHDMAPP and/or B. pseudomallei, in combination with IL-2, in a similar manner to human γ9(+)δ2(+) T cells. Here we evaluate the efficacy of the phosphoantigen CHDMAPP, in combination with IL-2, as a therapy against B. pseudomallei infection, in vivo. We found that the previous studies predicted the in vivo responsiveness of γ9(+) T cells to the CHDMAPP+IL-2 treatment and significant expansion of the numbers of peripheral and splenic γ9(+) T cells were observed. This effect was similar to those reported in other primate species treated with phosphoantigen. Furthermore, splenocytes were retrieved 7 days post onset of treatment, restimulated with CHDMAPP or heat-killed B. pseudomallei and the cultured γ9(+) T cells demonstrated no reduction in IFN-γ response when CHDMAPP+IL-2 animals were compared to IL-2 only treated animals. Using an established model of B. pseudomallei infection in the marmoset, we assessed the potential for using phosphoantigen as a novel immunotherapy. The CHDMAPP treatment regime had no effect on the progression of respiratory melioidosis and this was despite the presence of elevated numbers of γ9(+) T cells in the spleen, liver and lung and an increased proportion of IFN-γ(+) cells in response to infection. We therefore report that the common marmoset has proven a good model for studying the effect in vivo of γ9(+) T cell stimulation; however, γ9(+) T cells have little or no effect on the progression of lethal, respiratory B. pseudomallei infection.


Asunto(s)
Burkholderia pseudomallei/inmunología , Callithrix , Inmunoterapia/métodos , Melioidosis/veterinaria , Enfermedades de los Monos/tratamiento farmacológico , Enfermedades de los Monos/inmunología , Linfocitos T/metabolismo , Animales , Citometría de Flujo , Interferón gamma/metabolismo , Interleucina-2/inmunología , Melioidosis/tratamiento farmacológico , Melioidosis/inmunología , Fosfoproteínas/inmunología , Fosfoproteínas/farmacología , Fosfoproteínas/uso terapéutico
20.
Expert Rev Anti Infect Ther ; 11(8): 817-29, 2013 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-23977937

RESUMEN

Plague has been a scourge of mankind for centuries, and outbreaks continue to the present day. The virulence mechanisms employed by the etiological agent Yersinia pestis are reviewed in the context of the available prophylactic and therapeutic strategies for plague. Although antibiotics are available, resistance is emerging in this dangerous pathogen. Therapeutics used in the clinic are discussed and innovative approaches to the design and development of new therapeutic compounds are reviewed. Currently there is no licensed vaccine available for prevention of plague in the USA or western Europe, although both live attenuated strains and killed whole-cell extracts have been used historically. Live strains are still approved for human use in some parts of the world, such as the former Soviet Union, but poor safety profiles render them unacceptable to many countries. The development of safe, effective next-generation vaccines, including the recombinant subunit vaccine currently used in clinical trials is discussed.


Asunto(s)
Peste/prevención & control , Ensayos Clínicos como Asunto , Farmacorresistencia Bacteriana , Humanos , Peste/tratamiento farmacológico , Peste/transmisión , Vacunas de Subunidad/uso terapéutico , Vacunas Sintéticas/uso terapéutico , Virulencia , Yersinia pestis/efectos de los fármacos , Yersinia pestis/patogenicidad
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