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PURPOSE: To develop a fast denoising framework for high-dimensional MRI data based on a self-supervised learning scheme, which does not require ground truth clean image. THEORY AND METHODS: Quantitative MRI faces limitations in SNR, because the variation of signal amplitude in a large set of images is the key mechanism for quantification. In addition, the complex non-linear signal models make the fitting process vulnerable to noise. To address these issues, we propose a fast deep-learning framework for denoising, which efficiently exploits the redundancy in multidimensional MRI data. A self-supervised model was designed to use only noisy images for training, bypassing the challenge of clean data paucity in clinical practice. For validation, we used two different datasets of simulated magnetization transfer contrast MR fingerprinting (MTC-MRF) dataset and in vivo DWI image dataset to show the generalizability. RESULTS: The proposed method drastically improved denoising performance in the presence of mild-to-severe noise regardless of noise distributions compared to previous methods of the BM3D, tMPPCA, and Patch2self. The improvements were even pronounced in the following quantification results from the denoised images. CONCLUSION: The proposed MD-S2S (Multidimensional-Self2Self) denoising technique could be further applied to various multi-dimensional MRI data and improve the quantification accuracy of tissue parameter maps.
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Algoritmos , Encéfalo , Procesamiento de Imagen Asistido por Computador , Imagen por Resonancia Magnética , Relación Señal-Ruido , Humanos , Imagen por Resonancia Magnética/métodos , Encéfalo/diagnóstico por imagen , Procesamiento de Imagen Asistido por Computador/métodos , Aprendizaje Automático Supervisado , Aprendizaje ProfundoRESUMEN
BACKGROUND/AIMS: Since the coronavirus disease 2019 (COVID-19) outbreak, hospitals have implemented infection control measures to minimize the spread of the virus within facilities. This study aimed to investigate the impact of COVID-19 on the incidence of healthcare-associated infections (HCAIs) and common respiratory virus (cRV) infections in hematology units. METHODS: This retrospective study included all patients hospitalized in Catholic Hematology Hospital between 2019 and 2020. Patients infected with vancomycin-resistant Enterococci (VRE), carbapenemase-producing Enterobacterales (CPE), Clostridium difficile infection (CDI), and cRV were analyzed. The incidence rate ratio (IRR) methods and interrupted time series analyses were performed to compare the incidence rates before and after the pandemic. RESULTS: The incidence rates of CPE and VRE did not differ between the two periods. However, the incidence of CDI increased significantly (IRR: 1.41 [p = 0.002]) after the COVID-19 pandemic. The incidence of cRV infection decreased by 76% after the COVID-19 outbreak (IRR: 0.240 [p < 0.001]). The incidence of adenovirus, parainfluenza virus, and rhinovirus infection significantly decreased in the COVID-19 period (IRRs: 0.087 [p = 0.003], 0.031 [p < 0.001], and 0.149 [p < 0.001], respectively). CONCLUSION: The implementation of COVID-19 infection control measures reduced the incidence of cRV infection. However, CDI increased significantly and incidence rates of CPE and VRE remained unchanged in hematological patients after the pandemic. Infection control measures suitable for each type of HCAI, such as stringent hand washing for CDI and enough isolation capacities, should be implemented and maintained in future pandemics, especially in immunocompromised patients.
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COVID-19 , Infección Hospitalaria , Humanos , COVID-19/epidemiología , COVID-19/prevención & control , Incidencia , Estudios Retrospectivos , Infección Hospitalaria/epidemiología , Infección Hospitalaria/prevención & control , Infección Hospitalaria/diagnóstico , Infección Hospitalaria/microbiología , República de Corea/epidemiología , Masculino , Femenino , Persona de Mediana Edad , Control de Infecciones , Anciano , Adulto , Infecciones del Sistema Respiratorio/epidemiología , Infecciones del Sistema Respiratorio/virología , Infecciones del Sistema Respiratorio/microbiología , Infecciones del Sistema Respiratorio/diagnóstico , Hematología , SARS-CoV-2RESUMEN
BACKGROUND: Reducing Magnetic resonance imaging (MRI) scan time has been an important issue for clinical applications. In order to reduce MRI scan time, imaging acceleration was made possible by undersampling k-space data. This is achieved by leveraging additional spatial information from multiple, independent receiver coils, thereby reducing the number of sampled k-space lines. PURPOSE: The aim of this study is to develop a deep-learning method for parallel imaging with a reduced number of auto-calibration signals (ACS) lines in noisy environments. METHODS: A cycle interpolator network is developed for robust reconstruction of parallel MRI with a small number of ACS lines in noisy environments. The network estimates missing (unsampled) lines of each coil data, and these estimated missing lines are then utilized to re-estimate the sampled k-space lines. In addition, a slice aware reconstruction technique is developed for noise-robust reconstruction while reducing the number of ACS lines. We conducted an evaluation study using retrospectively subsampled data obtained from three healthy volunteers at 3T MRI, involving three different slice thicknesses (1.5, 3.0, and 4.5 mm) and three different image contrasts (T1w, T2w, and FLAIR). RESULTS: Despite the challenges posed by substantial noise in cases with a limited number of ACS lines and thinner slices, the slice aware cycle interpolator network reconstructs the enhanced parallel images. It outperforms RAKI, effectively eliminating aliasing artifacts. Moreover, the proposed network outperforms GRAPPA and demonstrates the ability to successfully reconstruct brain images even under severe noisy conditions. CONCLUSIONS: The slice aware cycle interpolator network has the potential to improve reconstruction accuracy for a reduced number of ACS lines in noisy environments.
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Procesamiento de Imagen Asistido por Computador , Imagen por Resonancia Magnética , Relación Señal-Ruido , Imagen por Resonancia Magnética/métodos , Procesamiento de Imagen Asistido por Computador/métodos , Humanos , Aprendizaje Profundo , Encéfalo/diagnóstico por imagenRESUMEN
PURPOSE: In MRI, motion artifacts can significantly degrade image quality. Motion artifact correction methods using deep neural networks usually required extensive training on large datasets, making them time-consuming and resource-intensive. In this paper, an unsupervised deep learning-based motion artifact correction method for turbo-spin echo MRI is proposed using the deep image prior framework. THEORY AND METHODS: The proposed approach takes advantage of the high impedance to motion artifacts offered by the neural network parameterization to remove motion artifacts in MR images. The framework consists of parameterization of MR image, automatic spatial transformation, and motion simulation model. The proposed method synthesizes motion-corrupted images from the motion-corrected images generated by the convolutional neural network, where an optimization process minimizes the objective function between the synthesized images and the acquired images. RESULTS: In the simulation study of 280 slices from 14 subjects, the proposed method showed a significant increase in the averaged structural similarity index measure by 0.2737 in individual coil images and by 0.4550 in the root-sum-of-square images. In addition, the ablation study demonstrated the effectiveness of each proposed component in correcting motion artifacts compared to the corrected images produced by the baseline method. The experiments on real motion dataset has shown its clinical potential. CONCLUSION: The proposed method exhibited significant quantitative and qualitative improvements in correcting rigid and in-plane motion artifacts in MR images acquired using turbo spin-echo sequence.
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Algoritmos , Artefactos , Aprendizaje Profundo , Procesamiento de Imagen Asistido por Computador , Imagen por Resonancia Magnética , Movimiento (Física) , Humanos , Imagen por Resonancia Magnética/métodos , Procesamiento de Imagen Asistido por Computador/métodos , Encéfalo/diagnóstico por imagen , Redes Neurales de la Computación , Simulación por ComputadorRESUMEN
Objective: Several lines of evidence indicate verbal abuse (VA) critically impacts the developing brain; however, whether VA results in changes in brain neurochemistry has not been established. Here, we hypothesized that exposure to recurrent parental VA elicits heightened glutamate (Glu) responses during the presentation of swear words, which can be measured with functional magnetic resonance spectroscopy (fMRS). Methods: During an emotional Stroop task consisting of blocks of color and swear words, metabolite concentration changes were measured in the ventromedial prefrontal cortex (vmPFC) and the left amygdalohippocampal region (AMHC) of healthy adults (14 F/27 M, 23 ± 4 years old) using fMRS. The dynamic changes in Glu and their associations with the emotional state of the participants were finally evaluated based on 36 datasets from the vmPFC and 30 from the AMHC. Results: A repeated-measures analysis of covariance revealed a modest effect of parental VA severity on Glu changes in the vmPFC. The total score on the Verbal Abuse Questionnaire by parents (pVAQ) was associated with the Glu response to swear words (ΔGluSwe). The interaction term of ΔGluSwe and baseline N-acetyl aspartate (NAA) level in the vmPFC could be used to predict state-trait anxiety level and depressive mood. We could not find any significant associations between ΔGluSwe in the AMHC and either pVAQ or emotional states. Conclusion: Parental VA exposure in individuals is associated with a greater Glu response towards VA-related stimuli in the vmPFC and that the accompanying low NAA level may be associated with anxiety level or depressive mood.
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Deep learning has been widely considered in medical image segmentation. However, the difficulty of acquiring medical images and labels can affect the accuracy of the segmentation results for deep learning methods. In this paper, an automatic segmentation method is proposed by devising a multicomponent neighborhood extreme learning machine to improve the boundary attention region of the preliminary segmentation results. The neighborhood features are acquired by training U-Nets with the multicomponent small dataset, which consists of original thyroid ultrasound images, Sobel edge images and superpixel images. Afterward, the neighborhood features are selected by min-redundancy and max-relevance filter in the designed extreme learning machine, and the selected features are used to train the extreme learning machine to obtain supplementary segmentation results. Finally, the accuracy of the segmentation results is improved by adjusting the boundary attention region of the preliminary segmentation results with the supplementary segmentation results. This method combines the advantages of deep learning and traditional machine learning, boosting the accuracy of thyroid segmentation accuracy with a small dataset in a multigroup test.
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Multi-cancer early detection remains a key challenge in cell-free DNA (cfDNA)-based liquid biopsy. Here, we perform cfDNA whole-genome sequencing to generate two test datasets covering 2125 patient samples of 9 cancer types and 1241 normal control samples, and also a reference dataset for background variant filtering based on 20,529 low-depth healthy samples. An external cfDNA dataset consisting of 208 cancer and 214 normal control samples is used for additional evaluation. Accuracy for cancer detection and tissue-of-origin localization is achieved using our algorithm, which incorporates cancer type-specific profiles of mutation distribution and chromatin organization in tumor tissues as model references. Our integrative model detects early-stage cancers, including those of pancreatic origin, with high sensitivity that is comparable to that of late-stage detection. Model interpretation reveals the contribution of cancer type-specific genomic and epigenomic features. Our methodologies may lay the groundwork for accurate cfDNA-based cancer diagnosis, especially at early stages.
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Ácidos Nucleicos Libres de Células , Neoplasias , Humanos , Ácidos Nucleicos Libres de Células/genética , Epigenoma , Neoplasias/diagnóstico , Neoplasias/genética , Genómica/métodos , Mutación , Biomarcadores de Tumor/genéticaRESUMEN
PURPOSE: To develop a fast, deep-learning approach for quantitative magnetization-transfer contrast (MTC)-MR fingerprinting (MRF) that simultaneously estimates multiple tissue parameters and corrects the effects of B0 and B1 variations. METHODS: An only-train-once recurrent neural network was designed to perform the fast tissue-parameter quantification for a large range of different MRF acquisition schedules. It enabled a dynamic scan-wise linear calibration of the scan parameters using the measured B0 and B1 maps, which allowed accurate, multiple-tissue parameter mapping. MRF images were acquired from 8 healthy volunteers at 3 T. Estimated parameter maps from the MRF images were used to synthesize the MTC reference signal (Zref ) through Bloch equations at multiple saturation power levels. RESULTS: The B0 and B1 errors in MR fingerprints, if not corrected, would impair the tissue quantification and subsequently corrupt the synthesized MTC reference images. Bloch equation-based numerical phantom studies and synthetic MRI analysis demonstrated that the proposed approach could correctly estimate water and semisolid macromolecule parameters, even with severe B0 and B1 inhomogeneities. CONCLUSION: The only-train-once deep-learning framework can improve the reconstruction accuracy of brain-tissue parameter maps and be further combined with any conventional MRF or CEST-MRF method.
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Encéfalo , Imagen por Resonancia Magnética , Humanos , Imagen por Resonancia Magnética/métodos , Encéfalo/diagnóstico por imagen , Redes Neurales de la Computación , Agua , Mapeo Encefálico , Fantasmas de Imagen , Procesamiento de Imagen Asistido por Computador/métodosRESUMEN
PURPOSE: A deep learning method is proposed for aligning diffusion weighted images (DWIs) and estimating intravoxel incoherent motion-diffusion kurtosis imaging parameters simultaneously. METHODS: We propose an unsupervised deep learning method that performs 2 tasks: registration and quantification for intravoxel incoherent motion-diffusion kurtosis imaging analysis. A common registration method in diffusion MRI is based on minimizing dissimilarity between various DWIs, which may result in registration errors due to different contrasts in different DWIs. We designed a novel unsupervised deep learning method for both accurate registration and quantification of various diffusion parameters. In order to generate motion-simulated training data and test data, 17 volunteers were scanned without moving their heads, and 4 volunteers moved their heads during the scan in a 3 Tesla MRI. In order to investigate the applicability of the proposed method to other organs, kidney images were also obtained. We compared the registration accuracy of the proposed method, statistical parametric mapping, and a deep learning method with a normalized cross-correlation loss. In the quantification part of the proposed method, a deep learning method that considered the diffusion gradient direction was used. RESULTS: Simulations and experimental results showed that the proposed method accurately performed registration and quantification for intravoxel incoherent motion-diffusion kurtosis imaging analysis. The registration accuracy of the proposed method was high for all b values. Furthermore, quantification performance was analyzed through simulations and in vivo experiments, where the proposed method showed the best performance among the compared methods. CONCLUSION: The proposed method aligns the DWIs and accurately quantifies the intravoxel incoherent motion-diffusion kurtosis imaging parameters.
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Imagen de Difusión por Resonancia Magnética , Imagen de Difusión Tensora , Humanos , Imagen de Difusión por Resonancia Magnética/métodos , Movimiento (Física) , Medios de Contraste , RiñónRESUMEN
Intense light-induced fragmentation of spherical clusters produces highly energetic ions with characteristic spatial distributions. By subjecting argon clusters to a wavelength tunable laser, we show that ion emission energy and anisotropy can be controlled through the wavelength-isotropic and energetic for shorter wavelengths and increasingly anisotropic at longer wavelengths. The anisotropic part of the energy spectrum, consisting of multiply charged high-energy ions, is considerably more prominent at longer wavelengths. Classical molecular dynamics simulations reveal that cluster ionization occurs inhomogeneously producing a columnlike charge distribution along the laser polarization direction. This previously unknown distribution results from the dipole response of the neutral cluster which creates an enhanced field at the surface, preferentially triggering ionization at the poles. The subsequently formed nanoplasma provides an additional wavelength-dependent ionization mechanism through collisional ionization, efficiently homogenizing the system only at short wavelengths close to resonance. Our results open the door to studying polarization induced effects in nanostructures and complex molecules and provide a missing piece in our understanding of anisotropic ion emission.
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Magnetization transfer contrast MR fingerprinting (MTC-MRF) is a novel quantitative imaging method that simultaneously quantifies free bulk water and semisolid macromolecule parameters using pseudo-randomized scan parameters. To improve acquisition efficiency and reconstruction accuracy, the optimization of MRF sequence design has been of recent interest in the MRF field, but has been challenging due to the large number of degrees of freedom to be optimized in the sequence. Herein, we propose a framework for learning-based optimization of the acquisition schedule (LOAS), which optimizes RF saturation-encoded MRF acquisitions with a minimal number of scan parameters for tissue parameter determination. In a supervised learning framework, scan parameters were subsequently updated to minimize a predefined loss function that can directly represent tissue quantification errors. We evaluated the performance of the proposed approach with a numerical phantom and in in vivo experiments. For validation, MRF images were synthesized using the tissue parameters estimated from a fully connected neural network framework and compared with references. Our results showed that LOAS outperformed existing indirect optimization methods with regard to quantification accuracy and acquisition efficiency. The proposed LOAS method could be a powerful optimization tool in the design of MRF pulse sequences.
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Encéfalo , Imagen por Resonancia Magnética , Algoritmos , Procesamiento de Imagen Asistido por Computador/métodos , Imagen por Resonancia Magnética/métodos , Redes Neurales de la Computación , Fantasmas de ImagenRESUMEN
PURPOSE: Anomaly detection in magnetic resonance imaging (MRI) is to distinguish the relevant biomarkers of diseases from those of normal tissues. In this paper, an unsupervised algorithm is proposed for pixel-level anomaly detection in multicontrast MRI. METHODS: A deep neural network is developed, which uses only normal MR images as training data. The network has the two stages of feature generation and density estimation. For feature generation, relevant features are extracted from multicontrast MR images by performing contrast translation and dimension reduction. For density estimation, the distributions of the extracted features are estimated by using Gaussian mixture model (GMM). The two processes are trained to estimate normative distributions well presenting large normal datasets. In test phases, the proposed method can detect anomalies by measuring log-likelihood that a test sample belongs to the estimated normative distributions. RESULTS: The proposed method and its variants were applied to detect glioblastoma and ischemic stroke lesion. Comparison studies with six previous anomaly detection algorithms demonstrated that the proposed method achieved relevant improvements in quantitative and qualitative evaluations. Ablation studies by removing each module from the proposed framework validated the effectiveness of each proposed module. CONCLUSION: The proposed deep learning framework is an effective tool to detect anomalies in multicontrast MRI. The unsupervised approaches would have great potentials in detecting various lesions where annotated lesion data collection is limited.
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Imagen por Resonancia Magnética , Accidente Cerebrovascular , Algoritmos , Humanos , Procesamiento de Imagen Asistido por Computador , Redes Neurales de la Computación , Distribución NormalRESUMEN
PURPOSE: A motion-correction network for multi-contrast brain MRI is proposed to correct in-plane rigid motion artifacts in brain MR images using deep learning. METHOD: The proposed method consists of 2 parts: image alignment and motion correction. Alignment of multi-contrast MR images is performed in an unsupervised manner by a CNN work, yielding transformation parameters to align input images in order to minimize the normalized cross-correlation loss among multi-contrast images. Then, fine-tuning for image alignment is performed by maximizing the normalized mutual information. The motion correction network corrects motion artifacts in the aligned multi-contrast images. The correction network is trained to minimize the structural similarity loss and the VGG loss in a supervised manner. All datasets of motion-corrupted images are generated using motion simulation based on MR physics. RESULTS: A motion-correction network for multi-contrast brain MRI successfully corrected artifacts of simulated motion for 4 test subjects, showing 0.96%, 7.63%, and 5.03% increases in the average structural simularity and 5.19%, 10.2%, and 7.48% increases in the average normalized mutual information for T1 -weighted, T2 -weighted, and T2 -weighted fluid-attenuated inversion recovery images, respectively. The experimental setting with image alignment and artifact-free input images for other contrasts shows better performances in correction of simulated motion artifacts. Furthermore, the proposed method quantitatively outperforms recent deep learning motion correction and synthesis methods. Real motion experiments from 5 healthy subjects demonstrate the potential of the proposed method for use in a clinical environment. CONCLUSION: A deep learning-based motion correction method for multi-contrast MRI was successfully developed, and experimental results demonstrate the validity of the proposed method.
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Artefactos , Imagen por Resonancia Magnética , Encéfalo/diagnóstico por imagen , Humanos , Procesamiento de Imagen Asistido por Computador , Movimiento (Física) , NeuroimagenRESUMEN
PURPOSE: To develop a framework for quantifying intravoxel incoherent motion (IVIM) parameters, where a neural network for quantification and b-values for diffusion-weighted imaging are simultaneously optimized. METHOD: A deep neural network (DNN) method is proposed for accurate quantification of IVIM parameters from multiple diffusion-weighted images. In addition, optimal b-values are selected to acquire the multiple diffusion-weighted images. The proposed framework consists of an MRI signal generation part and an IVIM parameter quantification part. Monte-Carlo (MC) simulations were performed to evaluate the accuracy of the IVIM parameter quantification and the efficacy of b-value optimization. In order to analyze the effect of noise on the optimized b-values, simulations were performed with five different noise levels. For in vivo data, diffusion images were acquired with the b-values from four b-values selection methods for five healthy volunteers at 3T MRI system. RESULTS: Experiment results showed that both the optimization of b-values and the training of DNN were simultaneously performed to quantify IVIM parameters. We found that the accuracies of the perfusion coefficient (Dp ) and perfusion fraction (f) were more sensitive to b-values than the diffusion coefficient (D) was. Furthermore, when the noise level changed, the optimized b-values also changed. Therefore, noise level has to be considered when optimizing b-values for IVIM quantification. CONCLUSION: The proposed scheme can simultaneously optimize b-values and train DNN to minimize quantification errors of IVIM parameters. The trained DNN can quantify IVIM parameters from the diffusion-weighted images obtained with the optimized b-values.
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Imagen de Difusión por Resonancia Magnética , Redes Neurales de la Computación , Voluntarios Sanos , Humanos , Movimiento (Física) , PerfusiónRESUMEN
PURPOSE: Medical image analysis using deep neural networks has been actively studied. For accurate training of deep neural networks, the learning data should be sufficient and have good quality and generalized characteristics. However, in medical images, it is difficult to acquire sufficient patient data because of the difficulty of patient recruitment, the burden of annotation of lesions by experts, and the invasion of patients' privacy. In comparison, the medical images of healthy volunteers can be easily acquired. To resolve this data bias problem, the proposed method synthesizes brain tumor images from normal brain images. METHODS: Our method can synthesize a huge number of brain tumor multicontrast MR images from numerous healthy brain multicontrast MR images and various concentric circles. Because tumors have complex characteristics, the proposed method simplifies them into concentric circles that are easily controllable. Then, it converts the concentric circles into various realistic tumor masks through deep neural networks. The tumor masks are used to synthesize realistic brain tumor images from normal brain images. RESULTS: We performed a qualitative and quantitative analysis to assess the usefulness of augmented data from the proposed method. Data augmentation by the proposed method provided significant improvements to tumor segmentation compared with other GAN-based methods. Intuitive experimental results are available online at https://github.com/KSH0660/BrainTumor. CONCLUSIONS: The proposed method can control the grade tumor masks by the concentric circles, and synthesize realistic brain tumor multicontrast MR images. In terms of data augmentation, the proposed method can successfully synthesize brain tumor images that can be used to train tumor segmentation networks or other deep neural networks.
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Neoplasias Encefálicas , Procesamiento de Imagen Asistido por Computador , Encéfalo/diagnóstico por imagen , Neoplasias Encefálicas/diagnóstico por imagen , Humanos , Imagen por Resonancia Magnética , Redes Neurales de la ComputaciónRESUMEN
PURPOSE: Reconstructing the images from undersampled k-space data are an ill-posed inverse problem. As a solution to this problem, we propose a method to reconstruct magnetic resonance (MR) images directly from k-space data using a recurrent neural network. METHODS: A novel neural network architecture named "ETER-net" is developed as a unified solution to reconstruct MR images from undersampled k-space data, where two bi-RNNs and convolutional neural network (CNN) are utilized to perform domain transformation and de-aliasing. To demonstrate the practicality of the proposed method, we conducted model optimization, cross-validation, and network pruning using in-house data from a 3T MRI scanner and public dataset called "FastMRI." RESULTS: The experimental results showed that the proposed method could be utilized for accurate image reconstruction from undersampled k-space data. The size of the proposed model was optimized and cross-validation was performed to show the robustness of the proposed method. For in-house dataset (R = 4), the proposed method provided nMSE = 1.09% and SSIM = 0.938. For "FastMRI" dataset, the proposed method provided nMSE = 1.05 % and SSIM = 0.931 for R = 4, and nMSE = 3.12 % and SSIM = 0.884 for R = 8. The performance of the pruned model trained the loss function including with L2 regularization was consistent for a pruning ratio of up to 70%. CONCLUSIONS: The proposed method is an end-to-end MR image reconstruction method based on recurrent neural networks. It performs direct mapping of the input k-space data and the reconstructed images, operating as a unified solution that is applicable to various scanning trajectories.
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Procesamiento de Imagen Asistido por Computador , Redes Neurales de la Computación , Imagen por Resonancia Magnética , Proyectos de InvestigaciónRESUMEN
PURPOSE: To develop a fast, quantitative 3D magnetization transfer contrast (MTC) framework based on an unsupervised learning scheme, which will provide baseline reference signals for CEST and nuclear Overhauser enhancement imaging. METHODS: Pseudo-randomized RF saturation parameters and relaxation delay times were applied in an MR fingerprinting framework to generate transient-state signal evolutions for different MTC parameters. Prospectively compressed sensing-accelerated (four-fold) MR fingerprinting images were acquired from 6 healthy volunteers at 3 T. A convolutional neural network framework in an unsupervised fashion was designed to solve an inverse problem of a two-pool MTC Bloch equation, and was compared with a conventional Bloch equation-based fitting approach. The MTC images synthesized by the convolutional neural network architecture were used for amide proton transfer and nuclear Overhauser enhancement imaging as a reference baseline image. RESULTS: The fully unsupervised learning scheme incorporated with the two-pool exchange model learned a set of unique features that can describe the MTC-MR fingerprinting input, and allowed only small amounts of unlabeled data for training. The MTC parameter values estimated by the unsupervised learning method were in excellent agreement with values estimated by the conventional Bloch fitting approach, but dramatically reduced computation time by ~1000-fold. CONCLUSION: Given the considerable time efficiency compared to conventional Bloch fitting, unsupervised learning-based MTC-MR fingerprinting could be a powerful tool for quantitative MTC and CEST/nuclear Overhauser enhancement imaging.
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Encéfalo , Aprendizaje Automático no Supervisado , Amidas , Humanos , Imagen por Resonancia Magnética , ProtonesRESUMEN
Semisolid magnetization transfer contrast (MTC) and chemical exchange saturation transfer (CEST) MRI based on MT phenomenon have shown potential to evaluate brain development, neurological, psychiatric, and neurodegenerative diseases. However, a qualitative MT ratio (MTR) metric commonly used in conventional MTC imaging is limited in the assessment of quantitative semisolid macromolecular proton exchange rates and concentrations. In addition, CEST signals measured by MTR asymmetry analysis are unavoidably contaminated by upfield nuclear Overhauser enhancement (NOE) signals of mobile and semisolid macromolecules. To address these issues, we developed an MTC-MR fingerprinting (MTC-MRF) technique to quantify tissue parameters, which further allows an estimation of accurate MTC signals at a certain CEST frequency offset. A pseudorandomized RF saturation scheme was used to generate unique MTC signal evolutions for different tissues and a supervised deep neural network was designed to extract tissue properties from measured MTC-MRF signals. Through detailed Bloch equation-based digital phantom and in vivo studies, we demonstrated that the MTC-MRF can quantify MTC characteristics with high accuracy and computational efficiency, compared to a conventional Bloch equation fitting approach, and provide baseline reference signals for CEST and NOE imaging. For validation, MTC-MRF images were synthesized using the tissue parameters estimated from the deep-learning method and compared with experimentally acquired MTC-MRF images as the reference standard. The proposed MTC-MRF framework can provide quantitative 3D MTC, CEST, and NOE imaging of the human brain within a clinically acceptable scan time.
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Encéfalo/diagnóstico por imagen , Aprendizaje Profundo , Imagen por Resonancia Magnética/métodos , Neuroimagen/métodos , Aprendizaje Automático Supervisado , HumanosRESUMEN
Rescattering by electrons on classical trajectories is central to understand photoelectron and high-harmonic emission from isolated atoms or molecules in intense laser pulses. By controlling the cluster size and the quiver amplitude of electrons, we demonstrate how rescattering influences the energy distribution of photoelectrons emitted from noble gas nanoclusters. Our experiments reveal a universal dependence of photoelectron energy distributions on the cluster size when scaled by the field driven electron excursion, establishing a unified rescattering picture for extended systems with the known atomic dynamics as the limit of zero extension. The result is supported by molecular dynamics calculations and rationalized with a one-dimensional classical model.
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PURPOSE: A locally segmented parallel imaging reconstruction method is proposed that efficiently utilizes sensitivity distribution of multichannel receiver coil. THEORY AND METHODS: A method of locally segmenting a MR signal is introduced to maximize the differences in sensitivity between receiver channels. A 1D Fourier transformation of the undersampled k-space data is performed along the readout direction, which generates a hybrid 2D space. The hybrid space is partitioned into localized segments along the readout direction. In every localized segment, kernels representing relation between adjacent signals are estimated from autocalibration signals, and data at unsampled points are estimated using the kernels. Then, the images are reconstructed from full k-space data that consists of the sampled data and the estimated data at unsampled points. RESULTS: In a computer simulation and in vivo experiments, the locally segmented reconstruction method produced fewer residual artifacts compared to the conventional parallel imaging reconstruction methods with the same kernel geometry. The performance gain of the proposed method comes from maximizing encoding capability of receiver channels, thus resulting in the accurately estimated kernel weights that reflect the relation between adjacent signals. CONCLUSION: The proposed spatial segmentation method maximally utilizes differences in the sensitivity of receiver channels to reconstruct images with reduced artifacts.