High-quality genome assembly and annotation of five bacteria isolated from the Abu Dhabi sabkha-shore region.

OBJECTIVES: Sabkhas represent polyextreme environments characterized by elevated salinity levels, intense ultraviolet (UV) radiation exposure, and extreme temperature fluctuations. In this study, we present the complete genomes of five bacterial isolates isolated from the sabkha-shore region and investigate their genomic organization and gene annotations. A better understanding of the bacterial genomic organization and genetic adaptations of these bacteria holds promise for engineering microbes with tailored functionalities for diverse industrial and agricultural applications, including bioremediation and promotion of plant growth under salinity stress conditions. DATA DESCRIPTION: We present a comprehensive genome sequencing and annotation of five bacteria (kcgeb_sa, kcgeb_sc, kcgeb_sd, kcgeb_S4, and kcgeb_S11) obtained from the shores of the Abu Dhabi Sabkha region. Initial bacterial identification was conducted through 16 S rDNA amplification and sequencing. Employing a hybrid genome assembly technique combining Illumina short reads (NovaSeq 6000) and Oxford Nanopore long reads (MinION), we obtained complete annotated high-quality gap-free genome sequences. The genome sizes of the kcgeb_sa, kcgeb_sc, kcgeb_sd, kcgeb_S4, and kcgeb_S11 isolates were determined to be 2.4 Mb, 4.1 Mb, 2.9 Mb, 5.05 Mb, and 4.1 Mb, respectively. Our analysis conclusively assigned the bacterial isolates as Staphylococcus capitis (kcgeb_sa), Bacillus spizizenii (kcgeb_sc and kcgeb_S11), Pelagerythrobacter marensis (kcgeb_sd), and Priestia aryabhattai (kcgeb_S4).

A Comparative Analysis of Antimicrobial, Antibiofilm and Antioxidant Activity of Silver Nanoparticles Synthesized from Erythrina Suberosa Roxb. and Ceiba Pentandra.

Biofilm forming bacteria can cause serious health problems that are difficult to combat. Silver nanoparticles (Ag-NPs) synthesized from plant extracts have potential to fight and eradicate biofilmforming bacteria. In the present research, AgNPs were synthesized using leaf and bark extract of Erythrina suberosa Roxb. and Ceiba pentandra L. and their antibiofilm, antioxidant and antibacterial activity was checked. Phytochemical analysis of the plant extracts showed important bioactive compounds such as tannins, saponins, steroids, phenolics, alkaloids, flavonoids and glycosides. The AgNPs were synthesized and confirmed by visual color observation and UV-Vis spectrophotometer. Visual color observation showed that the color of the leaf and bark extracts of E. suberosa and C. pentandra turned into brown. UV-Vis spectra analysis showed absorbance peak range between 430-450 nm. The antioxidant activity of the AgNPs was determined by FRAC (Ferrous reducing antioxidant capacity) assay. Synthesized AgNPs from all sources showed significant antioxidant activity. However, antioxidant activity of E. suberosa AgNPs was significant compared to other sources. Antibacterial activity and biofilm forming assay was analyzed against Escherichia coli, Pseudomonas aeruginosa and Staphylococcus aureus. The synthesized AgNPs silver nanoparticles showed significant (p ≤ 0.05) antibacterial activity against all the bacteria. The maximum zone of inhibition was found in case of E. suberosa AgNPs bark extract against P. aeruginosa was 20±1.154 mm. The results of biofilm forming assay showed that the AgNPs from all sources significantly (p ≤ 0.05) inhibited the activity of biofilms by all the tested bacteria. From results, it can be concluded that AgNPs synthesized from both plants can be used in developing antimicrobial compounds.