Measurement of IFN-γ and IL-2 for the assessment of the cellular immunity against SARS-CoV-2.

The study of specific T-cell responses against SARS-CoV-2 is important for understanding long-term immunity and infection management. The aim of this study was to assess the dual IFN-γ and IL-2 detection, using a SARS-CoV-2 specific fluorescence ELISPOT, in patients undergoing acute disease, during convalescence, and after vaccination. We also evaluated humoral response and compared with T-cells with the aim of correlating both types of responses, and increase the number of specific response detection. Blood samples were drawn from acute COVID-19 patients and convalescent individuals classified according to disease severity; and from unvaccinated and vaccinated uninfected individuals. IgGs against Spike and nucleocapsid, IgMs against nucleocapsid, and neutralizing antibodies were also analyzed. Our results show that IFN-γ in combination with IL-2 increases response detection in acute and convalescent individuals (p = 0.023). In addition, IFN-γ detection can be a useful biomarker for monitoring severe acute patients, as our results indicate that those individuals with a poor outcome have lower levels of this cytokine. In some cases, the lack of cellular immunity is compensated by antibodies, confirming the role of both types of immune responses in infection, and confirming that their dual detection can increase the number of specific response detections. In summary, IFN-γ/IL-2 dual detection is promising for characterizing and assessing the immunization status, and helping in the patient management.

Long-lasting adaptive immune memory specific to SARS-CoV-2 in convalescent coronavirus disease 2019 stable people with HIV.

OBJECTIVE: While the course of natural immunization specific to SARS-CoV-2 has been described among convalescent coronavirus disease 2019 (COVID-19) people without HIV (PWOH), a thorough evaluation of long-term serological and functional T- and B-cell immune memory among people with HIV (PWH) has not been reported. METHODS: Eleven stable PWH developing mild ( n  = 5) and severe ( n  = 6) COVID-19 and 39 matched PWOH individuals with mild (MILD) ( n  = 20) and severe (SEV) ( n  = 19) COVID-19 infection were assessed and compared at 3 and 6 months after infection for SARS-CoV-2-specific serology, polyfunctional cytokine (interferon-γ [IFN-γ], interleukin 2 [IL-2], IFN-γ/IL-2, IL-21) producing T-cell frequencies against four main immunogenic antigens and for circulating SARS-CoV-2-specific immunoglobulin G (IgG)-producing memory B-cell (mBc). RESULTS: In all time points, all SARS-COV-2-specific adaptive immune responses were highly driven by the clinical severity of COVID-19 infection, irrespective of HIV disease. Notably, while a higher proportion of mild PWH showed a higher decay on serological detection between the two time points as compared to PWOH, persistently detectable IgG-producing mBc were still detectable in most patients (4/4 (100%) for SEV PWH, 4/5 (80%) for MILD PWH, 10/13 (76.92%) for SEV PWOH and 15/18 (83.33%) for MILD PWOH). Likewise, SARS-CoV-2-specific IFN-γ-producing T-cell frequencies were detected in both PWH and PWOH, although significantly more pronounced among severe COVID-19 (6/6 (100%) for SEV PWH, 3/5 (60%) for MILD PWH, 18/19 (94.74%) for SEV PWOH and 14/19 (73.68%) for MILD PWOH). CONCLUSIONS: PWH develop a comparable short and long-term natural functional cellular and humoral immune response than PWOH convalescent patients, which are highly influenced by the clinical severity of the COVID-19 infection.

Data on immunogenicity and reactogenicity to COVID-19 vaccination among patients receiving maintenance dialysis.

Compared with the general population, patients receiving maintenance dialysis are at increased risk for morbidity and mortality associated with coronavirus disease 2019 (COVID-19). Currently, data on severe acute respiratory syndrome coronavirus type 2 (SARS-CoV-2)-specific immunity post-vaccination in patients on maintenance dialysis are scarce given that the effectiveness of the vaccines has not been explicitly tested in this population due to their common exclusion from SARS-CoV-2 vaccination trials. We herein present data of the specific cellular (interferon-γ and interleukin-2 ELISpot assays) and humoral immune responses (dot plot array and chemiluminescent microparticle immunoassay) at 4 weeks and 6 weeks following a single dose or a complete homologous dual dose SARS-CoV-2 vaccine regimen in 60 adult patients on maintenance dialysis (six with a history of COVID-19). The data was produced in a framework of a project focused on a) quantifying the immune response after full vaccination, b) evaluating the short-term durability of immune response, and c) examining the reactogenicity of SARS-CoV-2 vaccine regimens in patients on maintenance dialysis.

Immunogenicity and reactogenicity of homologous mRNA-based and vector-based SARS-CoV-2 vaccine regimens in patients receiving maintenance dialysis.

Patients receiving maintenance dialysis (MD) are vulnerable to COVID-19-related morbidity and mortality. Currently, data on SARS-CoV-2-specific cellular and humoral immunity post-vaccination in this population are scarce. We conducted a prospective single-center study exploring the specific cellular (interferon-γ and interleukin-2 ELISpot assays) and humoral immune responses (dot plot array and chemiluminescent microparticle immunoassay [CMIA]) at 4 weeks and 6 weeks following a single dose or a complete homologous dual dose SARS-CoV-2 vaccine regimen in 60 MD patients (six with a history of COVID-19). Our results show that MD patients exhibit a high seroconversion rate (91.7%) but the anti-spike IgG antibodies (CMIA) tend to wane rapidly after full immunization. Only 51.7% of the patients developed T cell immune response. High anti-spike IgG antibodies may predict a better cellular immunity. While patients with prior COVID-19 showed the best response after one, SARS-CoV-2-naïve patients may benefit from a third vaccine injection.

A comprehensive assessment of long-term SARS-CoV-2-specific adaptive immune memory in convalescent COVID-19 Solid Organ Transplant recipients.

Long-term adaptive immune memory has been reported among immunocompetent individuals up to eight months following SARS-CoV-2 infection. However, limited data is available in convalescent patients with a solid organ transplant. To investigate this, we performed a thorough evaluation of adaptive immune memory at different compartments (serological, memory B cells and cytokine [IFN-γ, IL-2, IFN-γ/IL12 and IL-21] producing T cells) specific to SARS-CoV-2 by ELISA and FluoroSpot-based assays in 102 convalescent patients (53 with a solid organ transplants (38 kidney, 5 liver, 5 lung and 5 heart transplant) and 49 immunocompetent controls) with different clinical COVID-19 severity (severe, mild and asymptomatic) beyond six months after infection. While similar detectable memory responses at different immune compartments were detected between those with a solid organ transplant and immunocompetent individuals, these responses were predominantly driven by distinct COVID-19 clinical severities (97.6%, 80.5% and 42.1%, all significantly different, were seropositive; 84% vs 75% vs 35.7%, all significantly different, showed IgG-producing memory B cells and 82.5%, 86.9% and 31.6%, displayed IFN-γ producing T cells; in severe, mild and asymptomatic convalescent patients, respectively). Notably, patients with a solid organ transplant with longer time after transplantation did more likely show detectable long-lasting immune memory, regardless of COVID-19 severity. Thus, our study shows that patients with a solid organ transplant are capable of maintaining long-lasting peripheral immune memory after COVID-19 infection; mainly determined by the degree of infection severity.

SARS-CoV-2-specific serological and functional T cell immune responses during acute and early COVID-19 convalescence in solid organ transplant patients.

The description of protective humoral and T cell immune responses specific against SARS-CoV-2 has been reported among immunocompetent (IC) individuals developing COVID-19 infection. However, its characterization and determinants of poorer outcomes among the at-risk solid organ transplant (SOT) patient population have not been thoroughly investigated. Cytokine-producing T cell responses, such as IFN-γ, IL-2, IFN-γ/IL-2, IL-6, IL-21, and IL-5, against main immunogenic SARS-CoV-2 antigens and IgM/IgG serological immunity were tracked in SOT (n = 28) during acute infection and at two consecutive time points over the following 40 days of convalescence and were compared to matched IC (n = 16) patients admitted with similar moderate/severe COVID-19. We describe the development of a robust serological and functional T cell immune responses against SARS-CoV-2 among SOT patients, similar to IC patients during early convalescence. However, at the infection onset, SOT displayed lower IgG seroconversion rates (77% vs. 100%; p = .044), despite no differences on IgG titers, and a trend toward decreased SARS-CoV-2-reactive T cell frequencies, especially against the membrane protein (7 [0-34] vs. 113 [15-245], p = .011, 2 [0-9] vs. 45 [5-74], p = .009, and 0 [0-2] vs. 13 [1-24], p = .020, IFN-γ, IL-2, and IFN-γ/IL-2 spots, respectively). In summary, our data suggest that despite a certain initial delay, SOT population achieve comparable functional immune responses than the general population after moderate/severe COVID-19.

Rotational alignment of NO (A2Σ+) from collisions with Ne.

We report the direct angle-resolved measurement of collision-induced alignment of short-lived electronically excited molecules using crossed atomic and molecular beams. Utilizing velocity-mapped ion imaging, we measure the alignment of NO in its first electronically excited state (A(2)Σ(+)) following single collisions with Ne atoms. We prepare A(2)Σ(+) (v = 0, N = 0, j = 0.5) and by comparing images obtained using orthogonal linear probe laser polarizations, we experimentally determine the degree of alignment induced by collisional rotational excitation for the final rotational states N' = 4, 5, 7, and 9. The experimental results are compared to theoretical predictions using both a simple classical hard-shell model and quantum scattering calculations on an ab initio potential energy surface (PES). The experimental results show overall trends in the scattering-angle dependent polarization sensitivity that are accounted for by the simple classical model, but structure in the scattering-angle dependence that is not. The quantum scattering calculations qualitatively reproduce this structure, and we demonstrate that the experimental measurements have the sensitivity to critique the best available potential surfaces. This sensitivity to the PES is in contrast to that predicted for ground-state NO(X) alignment.

Dual-etalon frequency-comb cavity ringdown spectrometer.

We have demonstrated a spectroscopic technique for simultaneously obtaining broad spectral bandwidth and high frequency resolution absorption measurements, with 5 µs temporal resolution, continuously for tens of microseconds in an apparatus with no active stabilization. The technique utilizes two passive air-gap etalons to imprint two frequency comb patterns onto a single pulsed light source. The air-gap etalons also serve as cavity ringdown cells increasing the sensitivity of the absorption spectroscopy by increasing the interrogation path length. Here, we demonstrate the operation of the spectrometer utilizing a ~0.15 cm(-1) bandwidth pulsed dye laser and two nearly identical 300 MHz free-spectral range confocal air-gap etalons each with a finesse of ~1 × 10(5), to investigate the (1,1,3) overtone of water and the R(7) transition of the O(2) b(1)Σ(g)(+)←X(3)Σ(g)(-) (2,0) band with high spectral resolution.

Communication: direct angle-resolved measurements of collision dynamics with electronically excited molecules: NO(A2Σ+) + Ar.

We report direct doubly differential (quantum state and angle-resolved) scattering measurements involving short-lived electronically excited molecules using crossed molecular beams. In our experiment, supersonic beams of nitric oxide and argon atoms collide at 90°. In the crossing region, NO molecules are excited to the A(2)Σ(+)state by a pulsed nanosecond laser, undergo rotationally inelastic collisions with Ar atoms, and are then detected 400 ns later (approximately twice the radiative lifetime of the A(2)Σ(+)state) by 1 + 1(') multiphoton ionization via the E(2)Σ(+) state. The velocity distributions of the scattered molecules are recorded using velocity-mapped ion imaging. The resulting images provide a direct measurement of the state-to-state differential scattering cross sections. These results demonstrate that sufficient scattering events occur during the short lifetimes typical of molecular excited states (∼200 ns, in this case) to allow spectroscopically detected quantum-state-resolved measurements of products of excited-state collisions.

A compact molecular beam machine.

We have developed a compact, low cost, modular, crossed molecular beam machine. The new apparatus utilizes several technological advancements in molecular beams valves, ion detection, and vacuum pumping to reduce the size, cost, and complexity of a molecular beam apparatus. We apply these simplifications to construct a linear molecular beam machine as well as a crossed-atomic and molecular beam machine. The new apparatus measures almost 50 cm in length, with a total laboratory footprint less than 0.25 m(2) for the crossed-atomic and molecular beam machine. We demonstrate the performance of the apparatus by measuring the rotational temperature of nitric oxide from three common molecular beam valves and by observing collisional energy transfer in nitric oxide from a collision with argon.

Differential cross sections for rotational excitation of ND3 by Ne.

We report the first measured differential cross sections for rotationally inelastic collisions between ND(3) and Ne, obtained using velocity-mapped ion imaging. In these experiments, ND(3) molecules initially in the J = 0, K = 0 and J = 1, K = 1 quantum states collide with Ne atoms at a center-of-mass collision energy of 65 meV, leading to rotational excitation of ND(3). Differential cross sections are then determined from images of the rotationally excited scattered molecules using an iterative extraction method. These measurements complement and compare well with previous measurements of differential cross sections for the ammonia-rare gas system (Meyer, H. J. Chem. Phys. 1994, 101, 6697.; Meyer, H. J. Phys. Chem. 1995, 99, 1101.) and are also relevant to the production of cold ND(3) molecules by crossed-beam scattering (Kay, J. J.; van de Meerakker, S. Y. T.; Strecker, K. E.; Chandler, D. W. Faraday Discuss. 2009, DOI: 10.1039/B819256C).

Imaging the rotationally state-selected NO(A,n) product from the predissociation of the A state of the NO-Ar van der Waals cluster.

The origin of the resonant structures in the spectrum of the predissociative part of the A state in the NO-Ar van der Waals cluster has been investigated. We have employed direct excitation to the predissociative part of the NO-Ar A state followed by rotational state selective ionization of the NO fragment. Velocity map imaging of the NO ion yields the recoil energy of the rotational state-selected fragment. A substantial contribution of rotational hotbands to the resonant structures is observed. Our data indicate that a centrifugal barrier as the origin of these resonances can be ruled out. We hypothesize that after the NO-Ar cluster is excited to the A state sufficient mixing within the rotating cluster takes place as it changes geometry from being T shaped in the NO(X)-Ar state to linear in the NO(A)-Ar state. This mixing allows the low energy and high angular momentum (J approximately = 4.5) tumbling motion of the initially populated hotbands in the ground state NO(X)-Ar complex to be converted into NO(A,n = 2) spinning rotation in the A state of the complex. The electronically excited spinning complex falls apart adiabatically producing rotationally excited NO(A,n = 2) at the energetic threshold. This interpretation indicates that the resonances can be attributed to some type of vibrational Feshbach resonance. The appearance energy for the formation of NO(A,n = 0)+Ar is found to be 44294.3+/-1.4 cm(-1).

The quest for cold and ultracold molecules.

Cool molecules: The cooling of molecules to sub-Kelvin temperatures promises to have a great impact in chemistry and physics. Recently, the first experimental realizations of samples of deeply bound molecules that are approaching the ultracold regime were reported. In this contribution, these interesting results are briefly discussed.

Production of cold ND3 by kinematic cooling.

We have produced translationally cold ammonia (ND3) molecules in various quantum states by kinematic cooling. In these experiments, ND3 molecules are brought nearly to rest in the (J, K) = (2,0), (2,1), (2,2), (3,1), (3,2), and (3,3) rotational levels of the ground vibronic state by rotationally-inelastic collisions with Ne atoms. The cold molecules are produced in quantum-state-dependent velocity distributions whose laboratory frame velocities are measured to be between 21 m s(-1) (E(trans)/k = 530 mk) and 32 m s(-1) (E(trans)/k = 1.2 K), and are calculated to be between 7.5 m s(-1) (E(trans)/k = 70 mK) and 27 m s(-1) (E(trans)/k = 880 mK). Due to systematic experimental effects, the measured velocities are upper limits to the actual velocities. These temperatures are low enough that it should be possible to use electrostatic traps to confine cold molecules in many of these quantum states.

Ultraviolet photodissociation of vinyl iodide: understanding the halogen dependence of photodissociation mechanisms in vinyl halides.

The photodissociation of vinyl iodide has been investigated at several wavelengths between 193 and 266 nm using three techniques: time-resolved Fourier transform emission spectroscopy, multiple pass laser absorption spectroscopy, and velocity-mapped ion imaging. The only dissociation channel observed is C-I bond cleavage to produce C2H3 (nu, N) + I (2P(J)) at all wavelengths investigated. Unlike photodissociation of other vinyl halides (C2H3X, X = F, Cl, Br), in which the HX product channel is significant, no HI elimination is observed. The angular and translational energy distributions of I atoms indicate that atomic products arise solely from dissociation on excited states with negligible contribution from internal conversion to the ground state. We derive an upper limit on the C-I bond strength of D0(C2H3-I) < or = 65 kcal mol(-1). The ground-state potential-energy surface of vinyl iodide is explored by ab initio calculations. We present a model in which the highest occupied molecular orbital in vinyl halides has increasing X(np) non-bonding character with increasing halogen mass. This change leads to reduced torsional force around the C-C bond in the excited state. Because the ground-state energy is highest when the CH2 plane is perpendicular to the CHX plane, a reduced torsional force in the excited state correlates with a lower rate for internal conversion compared to excited-state C-X bond fission. This model explains the gradual change in photodissociation mechanisms of vinyl halides from the dominance of internal conversion in vinyl fluoride to the dominance of excited-state dissociation in vinyl iodide.

Modification of the velocity distribution of H(2) molecules in a supersonic beam by intense pulsed optical gradients.

We report the acceleration and deceleration of H(2) molecules in a supersonic molecular beam by means of its interaction with an intense optical gradient from a nanosecond far-off-resonant optical pulse. The strong optical gradients are formed in the interference pattern of two intense optical pulses at 532 nm. The velocity distribution of the molecular beam, before and after the applied optical pulse, is measured by a velocity-mapped ion imaging technique. Changes in velocity up to 202 m s(-1)+/- 61 m s(-1) are observed in a molecular beam initially travelling at a mean speed of 563 m s(-1). We report the dependence of this change in velocity with the strength of the optical gradient applied.

Conversion of an atomic Fermi gas to a long-lived molecular Bose gas.

We have converted an ultracold Fermi gas of 6Li atoms into an ultracold gas of 6Li2 molecules by adiabatic passage through a Feshbach resonance. Approximately 1.5 x 10(5) molecules in the least-bound, v=38, vibrational level of the X1Sigma(+)(g) singlet state are produced with an efficiency of 50%. The molecules remain confined in an optical trap for times of up to 1 s before we dissociate them by a reverse adiabatic sweep.

Formation and propagation of matter-wave soliton trains.

Attraction between the atoms of a Bose-Einstein condensate renders it unstable to collapse, although a condensate with a limited number of atoms can be stabilized by confinement in an atom trap. However, beyond this number the condensate collapses. Condensates constrained to one-dimensional motion with attractive interactions are predicted to form stable solitons, in which the attractive forces exactly compensate for wave-packet dispersion. Here we report the formation of bright solitons of (7)Li atoms in a quasi-one-dimensional optical trap, by magnetically tuning the interactions in a stable Bose-Einstein condensate from repulsive to attractive. The solitons are set in motion by offsetting the optical potential, and are observed to propagate in the potential for many oscillatory cycles without spreading. We observe a soliton train, containing many solitons; repulsive interactions between neighbouring solitons are inferred from their motion.