Assessment of positive experiences using associative learning in chickens.

To determine whether differences in positive experiences can influence associative learning ability, 2 tasks were conducted with 90 laying hens at the peak of the laying period. The selected hens were reared in a larger flock under the same housing conditions without perches, so they had the same rearing experiences and were moved to either enriched cages or to the floor system at 16 wk of age. They belonged to 3 breeds (Slovenian barred hen: Ba; brown hen: Br; silver hen, S), with 30 hens per breed. The predictor signal, the sound of a clicker, with a 3-second delayed reinforcer (commercial layer feed) was used to mark the desired behaviour (pecking for feed). Hens that associated feed with a clicker (85.06%) were taught 2 tasks, the colour discrimination task (CD) and the target following task (TF). In the CD, the hens had to discriminate between yellow, red and blue colors and peck at a yellow magnet only. In the TF, the desired behaviour was to follow a target, a purple ball on a stick, from 1 perch to another and peck it at the end of the perch. The main results of the hens associating the signal with feed were that the Ba hens learned faster than the S hens (P = 0.006) and required fewer clicker sounds than the Br hens in the CD (P = 0.003). Floor hens that completed CD or TF or both took less time to complete the task (CD, P = 0.03, TF, P = 0.06; both tasks, P = 0.02) or with fewer clicker sounds (CD task; P = 0.02) than cage hens. Although these results suggest that Ba hens and floor hens showed better associate learning performance, probably because they perceived their environment as more rewarding and thus potentially more positive, caution is needed in interpretation considering social experiences and that the ability to perch and the ability to move quickly on a perch can be confounded in TF and both tasks can be confounded with foraging ability.

How Can We Advance Integrative Biology Research in Animal Science in 21st Century? Experience at University of Ljubljana from 2002 to 2022.

In this perspective analysis, we strive to answer the following question: how can we advance integrative biology research in the 21st century with lessons from animal science? At the University of Ljubljana, Biotechnical Faculty, Department of Animal Science, we share here our three lessons learned in the two decades from 2002 to 2022 that we believe could inform integrative biology, systems science, and animal science scholarship in other countries and geographies. Cultivating multiomics knowledge through a conceptual lens of integrative biology is crucial for life sciences research that can stand the test of diverse biological, clinical, and ecological contexts. Moreover, in an era of the current COVID-19 pandemic, animal nutrition and animal science, and the study of their interactions with human health (and vice versa) through integrative biology approaches hold enormous prospects and significance for systems medicine and ecosystem health.

Effects of Dimethyl Anthranilate-Based Repellents on Behavior, Plumage Condition, Egg Quality, and Performance in Laying Hens.

Feather pecking is a behavior that occurs in order to cope with a constrained environment and is a serious problem in the egg production industry. This longitudinal study was conducted under commercial conditions to investigate whether the application of two repellent mixtures, previously suggested as aversive to wild birds, to the plumage of Prelux-R hybrid egg layers is a viable alternative to beak trimming as a solution to discourage feather pecking among laying hens. A total of 180 untrimmed hybrid layers was reared together in a floor pen. At 18 weeks of age they were allocated randomly to three treatments (repellent P, repellent T, control), each consisting of 6 replicated enriched cages with 10 hens in each cage. Hens were evenly sprayed once every 2 weeks for 54 weeks with solution P (dimethyl anthranilate and methyl phenylacetate), solution T (dimethyl anthranilate and geraniol), or distilled water (control). Body weight, plumage condition, behavior, feed intake, and egg quality measurements were taken at five time periods from 26 to 76 weeks of age. Egg production and mortality were recorded daily. The treatments did not affect feather pecking behavior. Hens treated with repellent T tended to perform less cage pecking than the control hens. The use of the repellents did not reduce feather pecking, the plumage was even more significantly damaged in the hens given the repellents compared to the control hens. This suggests the chemicals in the repellents worsened the plumage. No differences in feed intake and daily egg production between treatments were found. Raw and hard-boiled eggs were highly uniform in odor/flavor/taste and no offensive odor absorption related to the chemicals in the repellents was detected. In conclusion, in the present study we did not find any beneficial effect of dimethyl anthranilate-based repellents on feather pecking frequency and plumage/feather condition. Therefore, we do not encourage their use in wider commercial settings.

Catalog of genetic variants within mature microRNA seed regions in chicken.

MicroRNA (miRNA) is a class of noncoding RNA important in posttranscriptional regulation of target genes. The regulation mechanism requires complementarity between target mRNA and the miRNA region responsible for their recognition and binding, also called the seed region. It has been estimated that each miRNA targets approximately 200 genes and genetic variability of miRNA genes has been associated with phenotypic variation and disease susceptibility in humans, livestock species, and model organisms. Polymorphisms in miRNA genes especially within the seed region could therefore represent biomarkers for phenotypic traits important in livestock animals. Using the updated Version 5.0 of our previously developed bioinformatics tool miRNA SNiPer we assembled polymorphic miRNA genes in chicken. Out of 740 miRNA genes 263 were polymorphic, among them 77 had SNPs located within the mature region, and 29 of them within the miRNA seed region. Because several polymorphisms in databases result from sequencing errors, we performed experimental validation of polymorphisms located within 4 selected miRNA genes in chicken (gga-mir-1614, -1644, -1648, and -1657). We confirmed the presence of nine polymorphisms and identified 3 additional novel polymorphisms within primary miRNA regions in chicken representing 3 layer-type breeds, one layer-type hybrid, and one meat-type intercrossed population. The developed catalog of mir-SNPs in chicken can serve researchers as a starting point for association studies dealing with poultry production traits and designing functional experiments.

Thirty-four generations of divergent selection for 8-week body weight in chickens.

Chickens of the Slovenian commercial Prelux-bro line were divergently selected over 34 generations for high and low BW at 8 wk of age. The aim of the study was to estimate responses to selection with a nonlinear model. Estimates of BW for each generation were provided by the mixed model. For fitting generation means against generation or cumulative selection differential, an exponential model was used. Estimates of realized heritability over generations were derived from regression of the response on cumulative selection differential. After 34 generations, the lines differed by approximately 2,220 g for males and 1,860 g for females. Estimates for a selection limit in the high line were 2,598.4 and 2,144.1 g, for males and females, respectively. A selection limit was not reached in the low line. Half of the selection response was obtained after approximately 6 to 8 generations in the high line and 20 to 28 generations in the low line. Estimated realized heritability decreased over generations. Heritability was larger for females than males and reduction of heritability was more rapid in the high line than in the low line. Genetic SD decreased over generations. Phenotypic SD increased over generations in the high line, but was constant in the low line in the initial 22 generations and decreased thereafter. According to the good fit of the nonlinear model and informative parameter estimates, the results confirmed the usefulness of the nonlinear model for analyzing responses to long-term selection.