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1.
Pest Manag Sci ; 2024 Apr 08.
Article En | MEDLINE | ID: mdl-38587057

BACKGROUND: Apolygus lucorum is one of the most important piercing-sucking insect pests of the tea plant In this study, we assessed the attractiveness of basil plants to A. lucorum and the effectiveness of Ocimum gratissimum L. in the control of A. lucorum. The control efficiency of main volatile chemicals emitted from O. gratissimum flowers was also evaluated. RESULTS: Among seven basil varieties, O. gratissimum was more attractive to A. lucorum adults and was selected as a trap plant to assess its attractiveness to A. lucorum and effects on natural enemies in tea plantations. The population density of A. lucorum on trap strips of O. gratissimum in tea plantations was significantly higher than that on tea at 10-20 m away from the trap strips. Intercropping O. gratissimum with tea plants, at high-density significantly reduced A. lucorum population levels. Eucalyptol, limonene, ß-ocimene, and linalool were the four dominant components in the O. gratissimum flower volatiles, and their emissions showed a gradual upward trend over the sampling period. Olfactometer assays indicated that eucalyptol and dodecane showed attraction to A. lucorum. High numbers of A. lucorum were recorded on limonene, eucalyptol, and myrcene-baited yellow sticky traps in field trials in which 11 dominant volatiles emitted by O. gratissimum flowers were evaluated. CONCLUSION: Our research indicated that the aromatic plant O. gratissimum and its volatiles could attract A. lucorum and planting O. gratissimum has the potential as a pest biocontrol method to manipulate A. lucorum populations in tea plantations. © 2024 Society of Chemical Industry.

2.
Front Pharmacol ; 15: 1348708, 2024.
Article En | MEDLINE | ID: mdl-38414734

Background: The etiological underpinnings of gastroesophageal reflux disease (GERD) and idiopathic pulmonary fibrosis (IPF) remain elusive, coupled with a scarcity of effective therapeutic interventions for IPF. Angelicae sinensis radix (ASR, also named Danggui) is a Chinese herb with potential anti-fibrotic properties, that holds promise as a therapeutic agent for IPF. Objective: This study seeks to elucidate the causal interplay and potential mechanisms underlying the coexistence of GERD and IPF. Furthermore, it aims to investigate the regulatory effect of ASR on this complex relationship. Methods: A two-sample Mendelian randomization (TSMR) approach was employed to delineate the causal connection between gastroesophageal reflux disease and IPF, with Phennoscanner V2 employed to mitigate confounding factors. Utilizing single nucleotide polymorphism (SNPs) and publicly available microarray data, we analyzed potential targets and mechanisms related to IPF in GERD. Network pharmacology and molecular docking were employed to explore the targets and efficacy of ASR in treating GERD-related IPF. External datasets were subsequently utilized to identify potential diagnostic biomarkers for GERD-related IPF. Results: The IVW analysis demonstrated a positive causal relationship between GERD and IPF (IVW: OR = 1.002, 95%CI: 1.001, 1.003; p < 0.001). Twenty-five shared differentially expressed genes (DEGs) were identified. GO functional analysis revealed enrichment in neural, cellular, and brain development processes, concentrated in chromosomes and plasma membranes, with protein binding and activation involvement. KEGG analysis unveiled enrichment in proteoglycan, ERBB, and neuroactive ligand-receptor interaction pathways in cancer. Protein-protein interaction (PPI) analysis identified seven hub genes. Network pharmacology analysis demonstrated that 104 components of ASR targeted five hub genes (PDE4B, DRD2, ERBB4, ESR1, GRM8), with molecular docking confirming their excellent binding efficiency. GRM8 and ESR1 emerged as potential diagnostic biomarkers for GERD-related IPF (ESR1: AUCGERD = 0.762, AUCIPF = 0.725; GRM8: AUCGERD = 0.717, AUCIPF = 0.908). GRM8 and ESR1 emerged as potential diagnostic biomarkers for GERD-related IPF, validated in external datasets. Conclusion: This study establishes a causal link between GERD and IPF, identifying five key targets and two potential diagnostic biomarkers for GERD-related IPF. ASR exhibits intervention efficacy and favorable binding characteristics, positioning it as a promising candidate for treating GERD-related IPF. The potential regulatory mechanisms may involve cell responses to fibroblast growth factor stimulation and steroidal hormone-mediated signaling pathways.

3.
BMC Biol ; 22(1): 42, 2024 Feb 20.
Article En | MEDLINE | ID: mdl-38378556

BACKGROUND: The adaptive mechanisms of agricultural pests are the key to understanding the evolution of the pests and to developing new control strategies. However, there are few studies on the genetic basis of adaptations of agricultural pests. The turnip moth, Agrotis segetum (Lepidoptera: Noctuidae) is an important underground pest that affects a wide range of host plants and has a strong capacity to adapt to new environments. It is thus a good model for studying the adaptive evolution of pest species. RESULTS: We assembled a high-quality reference genome of A. segetum using PacBio reads. Then, we constructed a variation map of A. segetum by resequencing 98 individuals collected from six natural populations in China. The analysis of the population structure showed that all individuals were divided into four well-differentiated populations, corresponding to their geographical distribution. Selective sweep analysis and environmental association studies showed that candidate genes associated with local adaptation were functionally correlated with detoxification metabolism and glucose metabolism. CONCLUSIONS: Our study of A. segetum has provided insights into the genetic mechanisms of local adaptation and evolution; it has also produced genetic resources for developing new pest management strategies.


Metagenomics , Moths , Animals , Moths/genetics , China
4.
Fish Shellfish Immunol ; 146: 109419, 2024 Mar.
Article En | MEDLINE | ID: mdl-38301812

Peroxiredoxins (Prxs) are a family of antioxidant enzymes crucial for shielding cells against oxidative damage from reactive oxygen species (ROS). In this study, we cloned and analyzed two grass carp peroxiredoxin genes, CiPrx5 and CiPrx6. These genes exhibited ubiquitous expression across all sampled tissues, with their expression levels significantly modulated upon exposure to grass carp reovirus (GCRV). CiPrx5 was localized in the mitochondria, while CiPrx6 was uniformly distributed in the whole cells. Transfection or transformation of CiPrx5 and CiPrx6 into fish cells or E. coli significantly enhanced host resistance to H2O2 and heavy metals, leading to increased cell viability and reduced cell apoptosis rates. Furthermore, purified recombinant CiPrx5 and CiPrx6 proteins effectively protected DNA against oxidative damage. Notably, overexpression of both peroxiredoxins in fish cells effectively inhibited GCRV replication, reduced intracellular ROS levels induced by GCRV infection and H2O2 treatment, and induced autophagy. Significantly, these functions of CiPrx5 and CiPrx6 in GCRV replication and ROS mitigation were abolished upon treatment with an autophagy inhibitor. In summation, our findings suggest that grass carp Prx5 and Prx6 promote autophagy to inhibit GCRV replication, decrease intracellular ROS, and provide protection against oxidative stress.


Carps , Fish Diseases , Orthoreovirus , Reoviridae Infections , Reoviridae , Animals , Carps/genetics , Carps/metabolism , Reactive Oxygen Species , Peroxiredoxins/genetics , Escherichia coli , Hydrogen Peroxide , Reoviridae Infections/prevention & control , Oxidative Stress , Autophagy , Fish Diseases/prevention & control
5.
Int J Biol Macromol ; 256(Pt 2): 128454, 2024 Jan.
Article En | MEDLINE | ID: mdl-38016608

Superoxide dismutases (SODs) are potent antioxidants crucial for neutralizing reactive oxygen species (ROS) and protecting organisms from oxidative damage. In this study, we successfully cloned and analyzed two SOD genes, CiSOD1 and CiSOD2, from grass carp (Ctenopharyngodon idellus). CiSOD1 consists of two CuZn signature motifs and two conserved cysteine residues, while CiSOD2 contains a single Mn signature motif. The expression of CiSODs was found to be ubiquitous across all examined tissues, with their expression levels significantly altered after stimulation by grass carp reovirus (GCRV) or pathogen-associated molecular patterns (PAMPs). CiSOD1 was observed to be uniformly distributed in the cytoplasm, whereas CiSOD2 localized in the mitochondria. Escherichia coli transformed with both CiSODs demonstrated enhanced host resistance to H2O2 and heavy metals. Additionally, purified recombinant CiSOD proteins effectively protected DNA against oxidative damage. Furthermore, overexpression of CiSODs in fish cells reduced intracellular ROS, inhibited autophagy, and then resulted in the promotion of GCRV replication. Knockdown of CiSODs showed opposite trends. Notably, these roles of CiSODs in autophagy and GCRV replication were reversed upon treatment with an autophagy inducer. In summary, our findings suggest that grass carp SODs play an important role in decreasing intracellular ROS levels, inhibiting autophagy, and subsequently promoting GCRV replication.


Carps , Fish Diseases , Reoviridae Infections , Reoviridae , Animals , Reoviridae Infections/veterinary , Reoviridae Infections/genetics , Carps/genetics , Antioxidants/pharmacology , Antioxidants/metabolism , Reactive Oxygen Species/metabolism , Hydrogen Peroxide/metabolism , Reoviridae/metabolism , Autophagy/genetics , Fish Diseases/genetics
6.
Front Plant Sci ; 14: 1251441, 2023.
Article En | MEDLINE | ID: mdl-37810382

Ambrosia artemisiifolia is a highly invasive weed. Identifying the characteristics and the factors influencing its establishment and population growth may help to identify high invasion risk areas and facilitate monitoring and prevention efforts. Six typical habitats: river banks, forests, road margins, farmlands, grasslands, and wastelands, were selected from the main distribution areas of A. artemisiifolia in the Yili Valley, China. Six propagule quantities of A. artemisiifolia at 1, 5, 10, 20, 50, and 100 seeds m-2 were seeded by aggregation, and dispersion in an area without A. artemisiifolia. Using establishment probability models and Allee effect models, we determined the minimum number of seeds and plants required for the establishment and population growth of A. artemisiifolia, respectively. We also assessed the moisture threshold requirements for establishment and survival, and the influence of native species. The influence of propagule pressure on the establishment of A. artemisiifolia was significant. The minimum number of seeds required varied across habitats, with the lowest being 60 seeds m-2 for road margins and the highest being 398 seeds for forests. The minimum number of plants required for population growth in each habitat was 5 and the largest number was 43 in pasture. The aggregation distribution of A. artemisiifolia resulted in a higher establishment and survival rate. The minimum soil volumetric water content required for establishment was significantly higher than that required for survival. The presence of native dominant species significantly reduced the establishment and survival rate of A. artemisiifolia. A. artemisiifolia has significant habitat selectivity and is more likely to establish successfully in a habitat with aggregated seeding with sufficient water and few native species. Establishment requires many seeds but is less affected by the Allee effect after successful establishment, and only a few plants are needed to ensure reproductive success and population growth in the following year. Monitoring should be increased in high invasion risk habitats.

7.
Sci Total Environ ; 904: 166982, 2023 Dec 15.
Article En | MEDLINE | ID: mdl-37741378

Biodiesel is considered as one of the most promising alternative fuels due to the depletion of fossil fuels and the need to cope with potential energy shortages in the future. This article provides a thorough analysis of biodiesel synthesis, covering a variety of topics including oil feedstock, synthesis methods, catalysts, and enhancement technologies. Different oil feedstock for the synthesis of biodiesel is compared in the review, including edible plant oil, non-edible plant oil, waste cooking oil, animal fat, microbial oil, and algae oil. In addition, different methods for the synthesis of biodiesel are discussed, including direct use, blending, thermal cracking, microemulsions, and transesterification processes, highlighting their respective advantages and disadvantages. Among them, the transesterification method is the most commonly used and a thorough examination is given of the benefits and drawbacks of utilizing enzymatic, heterogeneous, and homogeneous catalysts in this process. Moreover, this article provides an overview of emerging intensification technologies, such as ultrasonic and microwave-assisted, electrolysis, reactive distillation, and microreactors. The benefits and limitations of these emerging technologies are also reviewed. The contribution of this article is offering a thorough and detailed review of biodiesel production technologies, focusing mainly on recent advances in enhanced chemical reaction processes. This provides a resource for researchers to assess and compare the latest advancements in their investigations. It also opens up the potential for enhancing the value of oil feedstocks efficiently, contributing to the development of new energy sources.


Biofuels , Biomedical Enhancement , Animals , Plant Oils , Esterification , Food
8.
Infect Drug Resist ; 16: 5039-5053, 2023.
Article En | MEDLINE | ID: mdl-37576517

Objective: Infection is a common complication of acute pancreatitis (AP). Klebsiella pneumoniae (KP) is one of the most common pathogens associated with nosocomial infections. Our study focuses on investigating the clinical characteristics and risk factors for death of Klebsiella pneumoniae infections in AP patients, further to quantify the prognosis of the patients, and provide evidence for guiding antibiotic use and improving prognosis. Methods: The data of epidemiology, clinical manifestations and drug resistance rate with K. pneumoniae infections in AP patients from January 1, 2012 to August 30, 2022 were retrospectively collected. Logistic regression model and Cox regression model were, respectively, used to determine the risk factors for carbapenem-resistant Klebsiella pneumoniae (CRKP) acquisition and death. The nomogram prediction model was built by RMS software package to predict the 90-day survival rate. Results: One hundred and twenty-six AP patients combined with K. pneumoniae infections, with a mortality rate of 34.9%. The most common infection sites were pancreas and peri-pancreas (54.8%), followed by lung (20.6%) and blood stream (18.3%). The resistance rate of K. pneumoniae to commonly used antibiotics in clinical practice was high, especially CRKP, which was only sensitive to sulfamethoxazole-trimethoprim (SMZ-TMP) and tigecycline (TGC) (resistance rates were 37.57% and 17.57%, respectively). Independent risk factors for CPKP acquisition were male (OR = 1.655, 95% CI 0.642-4.265, P = 0.017) and PICC/CVC implantation (OR = 3.157, 95% CI 1.223-8.147, P = 0.021). Independent risk factors for mortality included carbapenem resistance (HR = 2.556, 95% CI 1.011-6.462, P = 0.047), hemorrhage (HR = 2.392, 95% CI 1.104-5.182, P = 0.027), septic shock (HR = 3.022, 95% CI 1.312-6.959, P = 0.009), age >60 years (HR = 2.977, 95% CI 1.303-6.799, P = 0.01), creatinine >177µmol/L (HR = 2.815, 95% CI 1.075-7.369, P = 0.035). Conclusion: K. pneumoniae infection has become a serious threat for AP patients, which recommends us more attention and active new strategies seeking.

9.
Crit Rev Food Sci Nutr ; : 1-11, 2023 Mar 06.
Article En | MEDLINE | ID: mdl-36876502

Apple polyphenols are one of the major bioactive compounds in apple products and have strong anti-inflammatory effects and the ability to prevent chronic diseases with health benefits. The development of apple polyphenol products is dependent on the extraction, purification and identification of apple polyphenols. The extracted polyphenols need to be further purified to improve the concentration of the extracted polyphenols. This review, therefore, presents the studies on the conventional and novel methods for polyphenols purification from apple products. The different chromatography methods, as one of the most widely used conventional purification methods, for polyphenol purification from various apple products are introduced. In addition, the perspective of the adsorption-desorption process and membrane filtration technique in enhancing the purification of polyphenols from apple products are presented in this review. The advantages and disadvantages of these purification techniques are also discussed and compared in depth. However, each of the reviewed technologies has some disadvantages that need to be overcome, and some mechanisms need to be further identified. Therefore, more competitive polyphenols purification techniques need to emerge in the future. It is hoped that this review can provide a research basis for the efficient purification of apple polyphenols, which can facilitate their application in various fields.

10.
Molecules ; 27(22)2022 Nov 08.
Article En | MEDLINE | ID: mdl-36431783

The purpose of this study is to explore the effects of pine pollen polysaccharides and sulfated polysaccharides on mice with ulcerative colitis and whether they could protect mice from inflammation by regulating the tight junctions of colonic epithelial cells and regulating the RIPK3-dependent necroptosis pathways. Pine pollen polysaccharides were prepared by water boiling and ethanol precipitation. After deproteinedization with trichloroacetic acid, the UV spectrum showed that there were no proteins. One polysaccharide component (PPM60-III) was made by gel filtration chromatography, and then sulfated polysaccharide (SPPM60-III) was derived using the chlorosulfonic acid-pyridine method. After treatment with PPM60-III and SPPM60-III, the body weight of mice with ulcerative colitis induced by dextran sodium sulfate increased, the DAI score decreased, the levels of pro-inflammatory factors and inflammation-related enzymes decreased, and the level of anti-inflammatory factors increased. In addition, after treatment, the expressions levels of tight junction proteins increased, the expressions levels of key proteins of programmed necroptosis decreased, while the level of Caspase-8 increased. The results indicated that pine pollen polysaccharides and sulfated polysaccharides have a certain therapeutic effect on UC mice, and the therapeutic effect may be achieved by regulating the tight junction of colonic epithelial cells and regulating the RIPK3-dependent necroptosis pathways.


Colitis, Ulcerative , Necroptosis , Mice , Animals , Tight Junctions , Sulfates/analysis , Dextran Sulfate/adverse effects , Colitis, Ulcerative/chemically induced , Colitis, Ulcerative/drug therapy , Polysaccharides/chemistry , Sulfur Oxides , Inflammation , Pollen/chemistry , Receptor-Interacting Protein Serine-Threonine Kinases
11.
mBio ; 13(6): e0229722, 2022 12 20.
Article En | MEDLINE | ID: mdl-36445081

Grass carp is an important commercial fish in China that is plagued by various diseases, especially the hemorrhagic disease induced by grass carp reovirus (GCRV). Nevertheless, the mechanism by which GCRV hijacks the host metabolism to complete its life cycle is unclear. In this study, we performed lipidomic analysis of grass carp liver samples collected before and after GCRV infection. GCRV infection altered host lipid metabolism and increased de novo fatty acid synthesis. Increased de novo fatty acid synthesis induced accumulation of lipid droplets (LDs). LDs are associated with GCRV viroplasms, as well as viral proteins and double-stranded RNA. Pharmacological inhibition of LD formation led to the disappearance of viroplasms, accompanied by decreased viral replication capacity. Moreover, transmission electron microscopy revealed LDs in close association with the viroplasms and mounted GCRV particles. Collectively, these data suggest that LDs are essential for viroplasm formation and are sites for GCRV replication and assembly. Our results revealed the detailed molecular events of GCRV hijacking host lipid metabolism to benefit its replication and assembly, which may provide new perspective for the prevention and control of GCRV. IMPORTANCE Grass carp reovirus (GCRV) is the most virulent pathogen in the genus Aquareovirus, which belongs to the family Reoviridae. GCRV-induced hemorrhagic disease is a major threat to the grass carp aquaculture industry. Viruses are obligate intracellular parasites that require host cell machinery to complete their life cycle; the mechanism by which GCRV hijacks the host metabolism to benefit viral replication and assembly remains unclear. Our study demonstrated that GCRV infection alters host lipid metabolism and increases de novo fatty acid synthesis. The increased de novo fatty acid synthesis induced accumulation of LDs, which act as sites or scaffolds for GCRV replication and assembly. Our findings illustrate a typical example of how the virus hijacks cellular organelles for replication and assembly and hence may provide new insights for the prevention and control of GCRV.


Carps , Fish Diseases , Reoviridae Infections , Reoviridae , Animals , Lipid Droplets , Reoviridae/physiology , Reoviridae Infections/genetics , Fatty Acids
12.
Sci Rep ; 12(1): 17424, 2022 10 19.
Article En | MEDLINE | ID: mdl-36261577

Ambrosia artemisiifolia and Ambrosia trifida are annual invasive plants that cause serious harm to agriculture, animal husbandry, and human health. Based on the important characteristic of high-density, cluster distribution of their populations, it is speculated that its autotoxins have an effect on density regulation. This study explored the regulation of autotoxicity on intraspecific density. We used water extracts from two plants to compare and verify the autotoxicity of seed germination, analysed the components of autotoxins. The results showed that A. artemisiifolia and A. trifida had significant autotoxicity, and the highest inhibition rates on seed germination were 27.21% and 77.94%, respectively; ultra-performance liquid chromatography tandem mass spectrometry analysis revealed that chlorogenic acid, caffeic acid, p-coumaric acid, and vanillin were the main autotoxins of the two plants. After the seeds were washed with water, the germination recovery rate of seeds increased with the increased of inhibition degree of autotoxins treatment. Therefore, this study verified the autotoxicity of A. artemisiifolia and A. trifida, which can promote and inhibit the seed germination of A. artemisiifolia and A. trifida to regulate intraspecific competition.


Ambrosia , Chlorogenic Acid , Humans , Chlorogenic Acid/pharmacology , Germination , Seeds/physiology , Water/pharmacology
13.
Antioxidants (Basel) ; 11(10)2022 Sep 29.
Article En | MEDLINE | ID: mdl-36290675

Peroxiredoxins are a family of antioxidant proteins that protect cells from oxidative damage caused by reactive oxygen species (ROS). Herein, the peroxiredoxin 3 gene from grass carp (Ctenopharyngodon idellus), named CiPrx3, was cloned and analyzed. The full-length cDNA of CiPrx3 is 1068 bp long, with a 753 bp open reading frame (ORF) that contains a thioredoxin-2 domain, two peroxiredoxin signature motifs, and two highly conserved cysteine residues. CiPrx3 was ubiquitously expressed in all the tested tissues, while its expression level was altered significantly after exposure to grass carp reovirus (GCRV) and pathogen-associated molecular patterns (PAMPs). CiPrx3 was localized in the mitochondria of transfected cells and concentrated in the nucleus after poly (I:C) treatment. Transformation of CiPrx3 into Escherichia coli enhanced host resistance to H2O2 and heavy metals. Purified recombinant CiPrx3 proteins could protect DNA against oxidative damage. Overexpression of CiPrx3 in fish cells reduced intracellular ROS, increased cell viability, and decreased cell apoptosis caused by H2O2 stimulation and GCRV infection. Further study indicated that CiPrx3 induced autophagy to inhibit GCRV replication in fish cells. Collectively, these results imply that grass carp Prx3 elevates host antioxidant activity and induces autophagy to inhibit GCRV replication.

14.
Front Plant Sci ; 13: 861806, 2022.
Article En | MEDLINE | ID: mdl-35646043

Common ragweed (Ambrosia artemisiifolia) is an invasive annual weed that invades heavily disturbed habitats and natural habitats less disturbed by human activities with native plant species in need of protection. Achieving effective control of A. artemisiifolia for the protection of native organisms and the local ecological environment is an ongoing challenge. Based on the growth and development characteristics of A. artemisiifolia, we examined the effectiveness of herbicides in controlling this species and the optimal time for application in the field with the aim of reducing herbicide dosage. Additionally, we analyzed whether the efficiency of low-dose applications for controlling this species might improve with increasing native plant species richness. Our findings indicate that aminopyralid (33 g ai ha-1) was the most suitable herbicide for chemical control of A. artemisiifolia, with optimum application time being during vegetative growth (BBCH 32-35). Application of aminopyralid was found to kill approximately 52% of A. artemisiifolia plants, and more than 75% of the surviving plants did not bloom, thereby reducing seed yield of the population by more than 90%. Compared with the application of high-dose herbicide, the phytotoxicity of aminopyralid to native plants at the applied dose was substantially reduced. After 2 years of application, the relative coverage of A. artemisiifolia significantly decreased, with few plants remaining, whereas the relative coverage of native plants more than doubled, representing an eco-friendly control. Further, there was an increase in the A. artemisiifolia control rate in the plant community with higher native plant species richness at the same herbicide rates and a reduction in seed yield of A. artemisiifolia. Our findings help toward developing control measures to reduce the invasiveness of A. artemisiifolia with low-dose herbicides meanwhile protecting native plants, and then using the species richness of native plant communities to indirectly promote the effectiveness of low-dose herbicide application.

15.
J Environ Manage ; 317: 115468, 2022 Sep 01.
Article En | MEDLINE | ID: mdl-35660828

Giant ragweed (Ambrosia trifida L.), an invasive weed, has an expanding distribution area and has recently started to spread in grasslands. This unusual event threatens grasslands worldwide. In this study, we aimed to evaluate the changes in the grassland soil seed banks caused by the giant ragweed invasion in Yili Valley, Xinjiang, China. Using the space-for-time substitution approach, we compared and quantified the soil seed bank communities in a grassland over eight years following giant ragweed invasion and after its removal. The results showed that the duration of invasion determined whether giant ragweed might pose a significant threat to the native seed bank community. Four years after the invasion, the in-site seed bank density of native community significantly decreased (30.44%), while the relative coverage of giant ragweed aboveground reached 83.75%. Furthermore, the species richness in the seed bank decreased significantly (12.36%), while the relative coverage of giant ragweed reached 100% six years after the invasion. Eight years after the invasion, the seed bank density and species richness of the native community decreased by 83.28% and 39.33%, respectively, whereby the seed banks tended to be homogeneous. After the removal of giant ragweed, the potential for regeneration was limited by the residual seed bank densities of the native community. Although the native seed bank density had increased significantly after three years of restoration, new growth was dominated by weedy species, rather than by the distinctive components of the grassland habitat. Our study clarifies the process by which giant ragweed causes damage to grasslands and serves as a reference for grassland restoration and management efforts.


Seed Bank , Soil , Ambrosia , Ecosystem , Grassland , Seeds
16.
BMC Genomics ; 23(1): 353, 2022 May 07.
Article En | MEDLINE | ID: mdl-35525948

BACKGROUND: The cotton leafworm, Spodoptera littoralis, is a highly polyphagous pest of many cultivated plants and crops in Africa and Europe. The genome of this pest will help us to further understand the molecular mechanisms of polyphagy. RESULTS: Herein, the high-quality genome of S. littoralis was obtained by Pacific Bioscience (PacBio) sequencing. The assembled genome size of S. littoralis is 436.55 Mb with a scaffold N50 of 6.09 Mb, consisting of 17,207 annotated protein-coding genes. Phylogenetic analysis shows that S. littoralis and its sibling species S. litura diverged about 5.44 million years ago. Expanded gene families were mainly involved in metabolic detoxification and tolerance to toxic xenobiotics based on GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway analysis. Comparative genomics analysis showed that gene families involved in detoxification and chemosensation were significantly expanded in S. littoralis, representing genetic characteristics related to polyphagy and an extensive host range. CONCLUSIONS: We assembled and annotated the reference genome of S. littoralis, and revealed that this pest has the genetic features of strong detoxification capacity, consistent with it being a significant risk to a wide range of host crops. These data resources will provide support for risk assessment and early warning monitoring of major polyphagous agricultural pests.


Genome , Genomics , Animals , Gossypium/genetics , Larva/genetics , Phylogeny , Spodoptera/genetics
17.
Eur J Med Res ; 27(1): 36, 2022 Mar 05.
Article En | MEDLINE | ID: mdl-35246255

BACKGROUND: Ischemic colitis is the most prevalent ischemic injury of the gastrointestinal tract. The majority of patients with mild ischemic colitis usually achieve complete clinical recovery shortly. However, the predictors of longer hospital stay duration are unclear. This study aimed to evaluate the predictors of hospital stay duration for patients with mild ischemic colitis. METHODS: We retrospectively evaluated 100 patients with mild ischemic colitis between January 2010 and December 2020 at Xiangya Hospital (a tertiary care center). The clinical characteristics and therapeutic drugs of patients who were hospitalized for ≤ 8 days and ≥ 12 days were compared. RESULTS: Of the 100 patients included, 63 (63%) were hospitalized for ≤ 8 days and 37 (37%) were hospitalized for ≥ 12 days. Patients with cerebrovascular disease (29.7% vs. 11.1%, p = 0.019) and abdominal surgical history (29.7% vs. 7.9%, p = 0.004) were more likely to be hospitalized for ≥ 12 days than for ≤ 8 days. The D-dimer levels [0.78 (0.41-1.82) vs. 0.28 (0.16-0.73), p = 0.001] and positive fecal occult blood test results (86.5% vs. 60.3%, p = 0.006) were higher in patients who were hospitalized for ≥ 12 days than in those who were hospitalized for ≤ 8 days. Probiotic use was greater in patients hospitalized for ≤ 8 days (76.2% vs. 54.1%, p = 0.022). Multivariate analysis indicated that cerebrovascular disease (odds ratio [OR] = 4.585; 95% confidence interval [CI] 1.129-18.624; p = 0.033), abdominal surgical history (OR = 4.551; 95% CI 1.060-19.546; p = 0.042), higher D-dimer levels (OR = 1.928; 95% CI 1.024-3.632; p = 0.042), and higher positive fecal occult blood test results (OR = 7.211; 95% CI 1.929-26.953; p = 0.003) were associated with longer hospital stays. CONCLUSION: Cerebrovascular disease, abdominal surgical history, higher D-dimer levels, and higher positive fecal occult blood test results are independent and significant factors that influence longer hospital stays for patients with mild ischemic colitis. Probiotics helped reduce hospital stay in these patients.


Colitis, Ischemic/therapy , Hospitals/statistics & numerical data , Length of Stay/trends , China/epidemiology , Colitis, Ischemic/diagnosis , Colitis, Ischemic/epidemiology , Female , Follow-Up Studies , Humans , Incidence , Male , Middle Aged , Retrospective Studies , Risk Factors , Time Factors , Tomography, X-Ray Computed
18.
Phytother Res ; 35(11): 6472-6485, 2021 Nov.
Article En | MEDLINE | ID: mdl-34661951

Acute pancreatitis (AP) is an acute inflammatory condition of the pancreas. Previous studies have shown that rutaecarpine (RUT), an important alkaloid component of Evodia rutaecarpa, exhibits certain protective effects against AP in rats by upregulating calcitonin gene-related peptide (CGRP). However, the molecular mechanism of RUT in AP remains unknown. This study aimed to investigate the effects of RUT on cerulein-induced AP in vivo and in vitro, and to explore the underlying molecular mechanisms. In cerulein/LPS-treated wild-type mice, but not CGRP gene knock-out mice, RUT significantly ameliorated pancreatic inflammation by alleviating histopathological changes, reducing IL-6 and TNF-α levels, and increasing in IL-10 levels. Moreover, RUT improved AP by suppressing the MAPK and NF-κB signaling pathways. These effects were mostly mediated through CGRP. Cell-based studies revealed that RUT significantly improved cell viability while suppressing the apoptosis of AR42J cells with cerulein-induced AP, downregulating IL-6 and TNF-α, stimulating IL-10 release, and inhibiting MAPK, NF-κB, and STAT3 signaling activation, all in a CGRP-dependent manner. RUT ameliorated cerulein/LPS-induced AP inflammatory responses in mice and AR42J cells in a CGRP-dependent manner and thus may represent a potential therapeutic option for AP patients. Our study provides valuable insights for AP drug development.


NF-kappa B , Pancreatitis , Acute Disease , Animals , Calcitonin , Calcitonin Gene-Related Peptide , Ceruletide , Humans , Indole Alkaloids , Mice , Pancreatitis/chemically induced , Pancreatitis/drug therapy , Quinazolines , Rats
19.
BMC Ecol Evol ; 21(1): 175, 2021 09 13.
Article En | MEDLINE | ID: mdl-34511075

BACKGROUND: Ambrosia artemisiifolia and Ambrosia trifida are globally distributed harmful and invasive weeds. High density clusters play an important role in their invasion. For these two species, the early settled populations are distributed at low densities, but they can rapidly achieve high population densities in a short period of time. However, their response to intraspecific competition to improve the fitness for rapid growth and maintenance of high population densities remains unclear. Therefore, to determine how these species form and maintain high population densities, individual biomass allocations patterns between different population densities (low and high), and plasticity during seedling, vegetative, breeding and mature stages were compared. In 2019, we harvested seeds at different population densities and compared them, and in 2020, we compared the number of regenerated plants across the two population densities. RESULTS: Most biomass was invested in the stems of both species. Ambrosia trifida had the highest stem biomass distribution, of up to 78%, and the phenotypic plasticity of the stem was the highest. Path analysis demonstrated that at low-density, total biomass was the biggest contributor to seed production, but stem and leaf biomass was the biggest contributors to high-density populations. The number of seeds produced per plant was high in low-density populations, while the seed number per unit area was huge in high-density populations. In the second year, the number of low-density populations increased significantly. A. artemisiifolia and A. trifida accounted for 75.6% and 68.4% of the mature populations, respectively. CONCLUSIONS: High input to the stem is an important means to regulate the growth of the two species to cope with different densities. These two species can ensure reproductive success and produce appropriate seed numbers. Therefore, they can maintain a stable population over time and quickly form cluster advantages. In the management, early detection of both species and prevention of successful reproduction by chemical and mechanical means are necessary to stop cluster formation and spread.


Ambrosia , Introduced Species , Biomass , Plant Breeding , Population Growth
20.
Plant Sci ; 302: 110720, 2021 Jan.
Article En | MEDLINE | ID: mdl-33288026

Glutamine plays a critical role in ammonium assimilation, and contributes substantially to the taste and nutritional quality of tea. To date, little research has been done on glutamine synthesis in tea plants. Here, a zinc finger protein CsDOF and a glutamine synthetase (GS)-encoding gene CsGS2 from tea plant (Camellia sinensis cv 'Shuchazao') were characterized, and their role in glutamine biosynthesis was determined using transient suppression assays in tea leaves and overexpression in Arabidopsis thaliana. The expression patterns of CsDOF and CsGS2, the GS activity and the glutamine content of photosynthetic tissues (leaf and bud) were significantly induced by shade. Suppressing the expression of CsDOF resulted in downregulated expression of CsGS2 and reduction of the leaf glutamine content. Moreover, in CsDOF-silenced plants, the expression of CsDOF and the glutamine content under shade treatment were higher than in natural light. The glutamine content and CsGS2 transcript level were also decreased in tea leaves when CsGS2 was suppressed, while they were higher under shade treatment than in natural light in CsGS2-silenced plants. In addition, the glutamine content and GS2 transcript level were increased when CsDOF and CsGS2 was overexpressed in Arabidopsis thaliana, respectively. In binding analyses, CsDOF directly bound to an AAAG motif in the promoter of CsGS2, and promotes its activity. The study shed new light on the molecular mechanism by which CsDOF activates CsGS2 gene expression and contributes to glutamine biosynthesis in tea plants.


Camellia sinensis/metabolism , Glutamine/metabolism , Plant Proteins/physiology , Transcription Factors/physiology , Zinc Fingers/physiology , Arabidopsis , Camellia sinensis/genetics , Electrophoretic Mobility Shift Assay , Gene Expression Regulation, Plant , Glutamate-Ammonia Ligase/metabolism , Phylogeny , Plant Leaves/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified , Real-Time Polymerase Chain Reaction , Sequence Alignment , Transcription Factors/genetics , Transcription Factors/metabolism , Two-Hybrid System Techniques , Zinc Fingers/genetics
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