MiR-2b-2-5p regulates lipid metabolism and reproduction by targeting CREB in Bactrocera dorsalis.

In female animals, metabolic homoeostasis and reproductive fitness are critical to population expansion. The trade-off between lipid storage and reproduction inevitably occurs. However, most studies have focused on the complex network of relationships between reproductive and metabolic physiology at the transcriptional level. In this study, we identified a microRNA, miR-2b-2-5p, in a highly invasive quarantine pest, Bactrocera dorsalis. Knockdown of miR-2b-2-5p by antagomiR microinjection impaired ovarian development, reduced fecundity, and decreased triglyceride (TAG) storage in the fat body, whereas overexpression of miR-2b-2-5p by injection of its mimic caused reproductive defects similar to knockdown but increased TAG. Bioinformatics analysis and dual luciferase assay indicated that cyclic AMP response element (CRE)-binding protein (CREB) was the target gene of miR-2b-2-5p. RNAi-mediated knockdown of CREB led to excessive lipid storage and reproductive defects. Further starvation treatment revealed that miR-2b-2-5p functions by fine-tuning CREB expression in response to dietary stimuli. These results suggest that miR-2b-2-5p acts as a monitor to regulate CREB mRNA levels in the fat body, maintaining lipid homoeostasis and keeping the reproductive system on track. Thus, our study not only provides new insights into the interaction between metabolism and reproduction at the posttranscriptional level in B. dorsalis, but also providing a potential eco-friendly control strategy (RNAi-based biopesticides targeting essential miRNAs) for this notorious agricultural pest.

Urbanization can accelerate climate change by increasing soil N2 O emission while reducing CH4 uptake.

Urban land-use change has the potential to affect local to global biogeochemical carbon (C) and nitrogen (N) cycles and associated greenhouse gas (GHG) fluxes. We conducted a meta-analysis to (1) assess the effects of urbanization-induced land-use conversion on soil nitrous oxide (N2 O) and methane (CH4 ) fluxes, (2) quantify direct N2 O emission factors (EFd ) of fertilized urban soils used, for example, as lawns or forests, and (3) identify the key drivers leading to flux changes associated with urbanization. On average, urbanization increases soil N2 O emissions by 153%, to 3.0 kg N ha-1  year-1 , while rates of soil CH4 uptake are reduced by 50%, to 2.0 kg C ha-1  year-1 . The global mean annual N2 O EFd of fertilized lawns and urban forests is 1.4%, suggesting that urban soils can be regional hotspots of N2 O emissions. On a global basis, conversion of land to urban greenspaces has increased soil N2 O emission by 0.46 Tg N2 O-N year-1 and decreased soil CH4 uptake by 0.58 Tg CH4 -C year-1 . Urbanization driven changes in soil N2 O emission and CH4 uptake are associated with changes in soil properties (bulk density, pH, total N content, and C/N ratio), increased temperature, and management practices, especially fertilizer use. Overall, our meta-analysis shows that urbanization increases soil N2 O emissions and reduces the role of soils as a sink for atmospheric CH4 . These effects can be mitigated by avoiding soil compaction, reducing fertilization of lawns, and by restoring native ecosystems in urban landscapes.

CRISPR/Cas9-induced Mutation of Sex Peptide Receptor Gene Bdspr Affects Ovary, Egg Laying, and Female Fecundity in Bactrocera dorsalis (Hendel) (Diptera: Tephritidae).

The oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae), is an invasive and polyphagous pest of horticultural crops, and it can cause huge economic losses in agricultural production. The rapid development of CRISPR/Cas9 gene editing technology has provided new opportunities for the scientific control of agricultural pests. Here, we explore the applicability of the B. dorsalis sex peptide receptor (Bdspr) as a target gene for the CRISPR/Cas9-based sterile insect technique (SIT) in B. dorsalis. We screened two high-efficient single guide RNAs (sgRNAs) for gene editing. The results showed that both mutation efficiency and germline transmission rate were 100% in the surviving G0 females (8/8) from injected embryos, and that 75% of mosaically mutated G0 females (6/8) were sterile. The 50% of heterozygous G1 females (4/8) could not lay eggs; 100% of eggs laid by them could not survive; and 62.5% of individual females (5/8) had abnormal ovaries. These results indicate that Bdspr plays an important role in regulating fertility, egg viability, and ovary development in female B. dorsalis, suggesting that the spr gene can be used for CRISPR/Cas9-based SIT in B. dorsalis.

Integrated analysis of miRNA and mRNA expression profiles in response to gut microbiota depletion in the abdomens of female Bactrocera dorsalis.

Insect gut microbiota has been reported to participate in regulating host multiple biological processes including metabolism and reproduction. However, the corresponding molecular mechanisms remain largely unknown. Recent studies suggest that microRNAs (miRNAs) are involved in complex interactions between the gut microbiota and the host. Here, we used next-generation sequencing technology to characterize miRNA and mRNA expression profiles and construct the miRNA-gene regulatory network in response to gut microbiota depletion in the abdomens of female Bactrocera dorsalis. A total of 3016 differentially expressed genes (DEGs) and 18 differentially expressed miRNAs (DEMs) were identified. Based on the integrated analysis of miRNA and mRNA sequencing data, 229 negatively correlated miRNA-gene pairs were identified from the miRNA-mRNA network. Gene ontology enrichment analysis indicated that DEMs could target several genes involved in the metabolic process, oxidation-reduction process, oogenesis, and insulin signaling pathway. Finally, real-time quantitative polymerase chain reaction further verified the accuracy of RNA sequencing results. In conclusion, our study provides the profiles of miRNA and mRNA expressions under antibiotics treatment and provides an insight into the roles of miRNAs and their target genes in the interaction between the gut microbiota and its host.

miR-275/305 cluster is essential for maintaining energy metabolic homeostasis by the insulin signaling pathway in Bactrocera dorsalis.

Increasing evidence indicates that miRNAs play crucial regulatory roles in various physiological processes of insects, including systemic metabolism. However, the molecular mechanisms of how specific miRNAs regulate energy metabolic homeostasis remain largely unknown. In the present study, we found that an evolutionarily conserved miR-275/305 cluster was essential for maintaining energy metabolic homeostasis in response to dietary yeast stimulation in Bactrocera dorsalis. Depletion of miR-275 and miR-305 by the CRISPR/Cas9 system significantly reduced triglyceride and glycogen contents, elevated total sugar levels, and impaired flight capacity. Combined in vivo and in vitro experiments, we demonstrated that miR-275 and miR-305 can bind to the 3'UTR regions of SLC2A1 and GLIS2 to repress their expression, respectively. RNAi-mediated knockdown of these two genes partially rescued metabolic phenotypes caused by inhibiting miR-275 and miR-305. Furthermore, we further illustrated that the miR-275/305 cluster acting as a regulator of the metabolic axis was controlled by the insulin signaling pathway. In conclusion, our work combined genetic and physiological approaches to clarify the molecular mechanism of metabolic homeostasis in response to different dietary stimulations and provided a reference for deciphering the potential targets of physiologically important miRNAs in a non-model organism.

Changing weekend effects of air pollutants in Beijing under 2020 COVID-19 lockdown controls.

In 2020, lockdown control measures were implemented to prevent a novel coronavirus disease 19 (COVID-19) pandemic in many places of the world, which largely reduced human activities. Here, we detect changes in weekly cycles of PM2.5, NO2, SO2, CO and O3 concentrations in 2020 compared to 2018 and 2019 using the observed data at 32 stations in Beijing. Distinct weekly cycles of annual average PM2.5, NO2, SO2 and CO concentrations existed in 2018, while the weekend effects changed in 2020. In addition, the weekly cycle magnitudes of PM2.5, NO2, SO2, and O3 concentrations in 2020 decreased by 29.60-69.26% compared to 2018, and 4.49-47.21% compared to 2019. We propose that the changing weekend effects and diminishing weekly cycle magnitudes may be tied to the COVID-19 lockdown controls, which changed human working and lifestyle cycles and reduced anthropogenic emissions of air pollutants on weekends more than weekdays.

Characteristics of annual N2O and NO fluxes from Chinese urban turfgrasses.

Urban turfgrass ecosystems are expected to increase at unprecedented rates in upcoming decades, due to the increasing population density and urban sprawl worldwide. However, so far urban turfgrasses are among the least understood of all terrestrial ecosystems concerning their impact on biogeochemical N cycling and associated nitrous oxide (N2O) and nitric oxide (NO) fluxes. In this study, we aimed to characterize and quantify annual N2O and NO fluxes from urban turfgrasses dominated by either C4, warm-season species or C3, cool-season and shade-enduring species, based on year-round field measurements in Beijing, China. Our results showed that soil N2O and NO fluxes varied substantially within the studied year, characterizing by higher emissions during the growing season and lower fluxes during the non-growing season. The regression model fitted by soil temperature and soil water content explained approximately 50%-70% and 31%-38% of the variance in N2O and NO fluxes, respectively. Annual cumulative emissions for all urban turfgrasses ranged from 0.75 to 1.27 kg N ha-1 yr-1 for N2O and from 0.30 to 0.46 kg N ha-1 yr-1 for NO, both are generally higher than those of Chinese natural grasslands. Non-growing season fluxes contributed 17%-37% and 23%-30% to the annual budgets of N2O and NO, respectively. Our results also showed that compared to the cool-season turfgrass, annual N2O and NO emissions were greatly reduced by the warm-season turfgrass, with the high root system limiting the availability of inorganic N substrates to soil microbial processes of nitrification and denitrification. This study indicates the importance of enhanced N retention of urban turfgrasses through the management of effective species for alleviating the potential environmental impacts of these rapidly expanding ecosystems.

Comparative genomics of Klebsiella michiganensis BD177 and related members of Klebsiella sp. reveal the symbiotic relationship with Bactrocera dorsalis.

BACKGROUND: Bactrocera dorsalis is a destructive polyphagous and highly invasive insect pest of tropical and subtropical species of fruit and vegetable crops. The sterile insect technique (SIT) has been used for decades to control insect pests of agricultural, veterinary, and human health importance. Irradiation of pupae in SIT can reduce the ecological fitness of the sterile insects. Our previous study has shown that a gut bacterial strain BD177 that could restore ecological fitness by promoting host food intake and metabolic activities. RESULTS: Using long-read sequence technologies, we assembled the complete genome of K. michiganensis BD177 strain. The complete genome of K. michiganensis BD177 comprises one circular chromosome and four plasmids with a GC content of 55.03%. The pan-genome analysis was performed on 119 genomes (strain BD177 genome and 118 out of 128 published Klebsiella sp. genomes since ten were discarded). The pan-genome includes a total of 49305 gene clusters, a small number of 858 core genes, and a high number of accessory (10566) genes. Pan-genome and average nucleotide identity (ANI) analysis showed that BD177 is more similar to the type strain K. michiganensis DSM2544, while away from the type strain K. oxytoca ATCC13182. Comparative genome analysis with 21 K. oxytoca and 12 K. michiganensis strains, identified 213 unique genes, several of them related to amino acid metabolism, metabolism of cofactors and vitamins, and xenobiotics biodegradation and metabolism in BD177 genome. CONCLUSIONS: Phylogenomics analysis reclassified strain BD177 as a member of the species K. michiganensis. Comparative genome analysis suggested that K. michiganensis BD177 has the strain-specific ability to provide three essential amino acids (phenylalanine, tryptophan and methionine) and two vitamins B (folate and riboflavin) to B. dorsalis. The clear classification status of BD177 strain and identification of unique genetic characteristics may contribute to expanding our understanding of the symbiotic relationship of gut microbiota and B. dorsalis.

How Are Wearable Activity Trackers Adopted in Older Adults? Comparison between Subjective Adoption Attitudes and Physical Activity Performance.

Wearable activity trackers can motivate older adults to engage in the recommended daily amount of physical activity (PA). However, individuals may not maintain their use of the trackers over a longer period. To investigate the attitudes of activity tracker adoption and their effects on actual PA performance, we conducted a three-month study. We gave activity trackers to 16 older adults and assessed attitudes on activity tracker adoption through a survey during the study period. We extracted participants' PA measures, step counts, and moderate and vigorous physical activity (MVPA) times. We observed significant differences in adoption attitudes during the three different periods (χ2(2, 48) = 6.27, p < 0.05), and PA measures followed similar decreasing patterns (F(83, 1357) = 12.56, 13.94, p < 0.00001). However, the Pearson correlation analysis (r = 0.268, p = 0.284) and a Bland-Altman plot indicated a bias between two PA measures. Positive attitudes at the initial stage did not persist through the study period, and both step counts and length of MVPA time showed waning patterns in the study period. The longitudinal results from both measures demonstrated the patterns of old adults' long-term use and adoption. Considering the accuracy of the activity tracker and older adults' athletic ability, MVPA times are more likely to be a reliable measure of older adults' long-term use and successful adoption of activity trackers than step counts. The results support the development of better activity tracker design guidelines that would facilitate long-term adoption among older adults.

Simulation of dissolved organic carbon concentrations and fluxes in Chinese monsoon forest ecosystems using a modified TRIPLEX-DOC model.

Dissolved organic carbon (DOC) plays an important role in global and regional carbon cycles. However, the quantification of DOC in forest ecosystems remains uncertain. Here, the processed-based biogeochemical model TRIPLEX-DOC was modified by optimizing the function of soil organic carbon distribution with increasing depths, as well as DOC sorption-desorption efficiency. The model was validated by field measurements of DOC concentration and flux at five forest sites and Beijiang River basin in monsoon regions of China. Model validation indicated that seasonal patterns of DOC concentration across climatic zones were different, and these differences were captured by our model. Importantly, the modified model performed better than the original model. Indeed, model efficiency of the modified model increased from -0.78 to 0.19 for O horizon predictions, and from -0.46 to 0.42 for the mineral soils predictions. Likewise, DOC fluxes were better simulated by the modified model. At the site scale, the simulated DOC fluxes were strongly correlated with the observed values (R2 = 0.97, EF = 0.91). At the regional scale, the DOC flux predicted in the Beijiang River basin was 16.44 kg C/ha, which was close to the observed value of 17 kg C/ha. Using sensitivity analysis, we showed that temperature, precipitation and temperature sensitivity of DOC decomposition (Q10) were the most sensitive parameters when predicting DOC concentrations and fluxes in forest soils. We also found that both the percentage of DOC flux to forest net ecosystem productivity, and the retention of DOC by mineral soil were highly correlated with the amount of precipitation. Overall, our model validations indicated that the modified TRIPLEX-DOC model is a useful tool for simulating the dynamics of DOC concentrations and fluxes in forest ecosystems. We highlight that more accurate estimates of parameter Q10 in deep mineral soils can reduce model uncertainty, when simulating DOC concentrations and fluxes in forest soils.

Characterization of the oral breakdown, sensory properties, and volatile release during mastication of white bread.

The oral breakdown, sensory properties, and volatile release during mastication of white bread were investigated. The results of correlation analysis for white bread's physical properties and it's oral physiological parameters during chewing have elucidated that bread's physical properties determined the oral processing behavior. During chewing of white bread, 15 dominant ions with regularly changing patterns were monitored by proton transfer reaction-mass spectrometry (PTR-MS). These dominant ions derived from 32 volatile compounds were further confirmed by pure standards. Partial least squares regression (PLSR) analysis was used to explore the positive correlations between the sensory analysis and the dominant aroma compounds. Results have shown that 9 aroma compounds were predicted as the potent odorants contributing to the changes in aroma profiles. Finally, 3-hydroxy-2-butanone, 2-methyl-1-propanol, and heptanoic acid were confirmed as the key aroma compounds contributing to the changes in aroma profiles of white bread before and after chewing.

Identification and Characterization of Sex-Biased MicroRNAs in Bactrocera dorsalis (Hendel).

MicroRNAs (miRNAs) are a class of endogenous small non-coding RNAs that regulate various biological processes including sexual dimorphism. The oriental fruit fly Bactrocera dorsalis is one of the most destructive agricultural insect pests in many Asian countries. However, no miRNAs have been identified from the separate sex and gonads to elucidate sex gonad differentiation in B. dorsalis. In this study, we constructed four small RNA libraries from whole body of females, males (except ovaries and testes) and ovaries, testes of B. dorsalis for deep sequencing. The data analysis revealed 183 known and 120 novel miRNAs from these libraries. 18 female-biased and 16 male-biased miRNAs that may be involved in sexual differentiation were found by comparing the miRNA expression profiles in the four libraries. Using a bioinformatic approach, we predicted doublesex (dsx) as a target gene of the female-biased miR-989-3p which is considered as the key switch gene in the sex determination of tephritid insects. This study reveals the first miRNA profile related to the sex differentiation and gives a first insight into sex differences in miRNA expression of B. dorsalis which could facilitate studies of the reproductive organ specific roles of miRNAs.

[Research advances on volatile organic compounds emission inventory of plants].

Reference to relative literatures in recent years, model building and calculation on volatile organic compound (VOC) emission inventory of plants were summarized in different spatial scales, the total annual VOC emission amounts from Vegetation in China are in the range from 12.4 Tg x a(-1) to 28.4 Tg x a(-1). For garden plants in Beijing, the annual VOC emissions are approximately 38 500 tons C in 2000. Furthermore, in order to determine reduction strategies for Beijing urban atmospheric major pollutants, the contribution of garden plant VOC emissions to the ozone and secondary organic aerosol (SOA) formation was presented, compared to garden plant in the same period, the largest contribution to ozone formation comes from aromatic hydrocarbons and olefin which are exhausted from anthropogenic activity, besides, the aromatic hydrocarbons exhausted from anthropogenic activity is also a main contribution source for the potential formation of SOA. In the meantime, it is suggested to focus on emission control of VOCs which are emitted from urban anthropogenic sources.