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Chinese Journal of Oncology ; (12): 836-841, 2011.
Artículo en Chino | WPRIM (Pacífico Occidental) | ID: wpr-320126

RESUMEN

<p><b>OBJECTIVE</b>To screen potential serum marker proteins of osteosarcoma, and to make a preliminary bioinformatics analysis of RNA polymerase III polypeptide F (POLR3F).</p><p><b>METHODS</b>Gene chip and SELDI-TOF MS was used to screen genes differentially expressed in osteosarcoma. The associations of potential biomarkers from SELDI data and microarray analysis were further inferred by link-test to identify biomarkers that could likely be used for diagnosis. MATLAB was used to search transcription factors binding site in the promoter region and miRNAs binding site in 3'-UTR of POLR3F, respectively.</p><p><b>RESULTS</b>653 differentially expressed genes were found in osteosarcoma cells, while six differentially expressed protein peaks with significant statistical significances were detected by SELDI-TOF MS in patient's serum. 13 potential biomarkers for early diagnosis of osteosarcoma were screened by link-test. A conserved STAT3 binding site and a miRNA target site were found in proximal promoter regions and 3'-UTR region of POLR3F, respectively.</p><p><b>CONCLUSIONS</b>Link-test is a effective method to identify osteosarcoma biomarkers from both microarray and SELDI-TOF MS database. The results confirmed that POLR3F may be a promising biomarker for early diagnosis and a therapy target of osteosarcoma.</p>


Asunto(s)
Adolescente , Adulto , Niño , Femenino , Humanos , Masculino , Adulto Joven , Sitios de Unión , Biomarcadores de Tumor , Sangre , Proteínas Sanguíneas , Neoplasias Óseas , Genética , Metabolismo , Perfilación de la Expresión Génica , Regulación Neoplásica de la Expresión Génica , Análisis de Secuencia por Matrices de Oligonucleótidos , Osteosarcoma , Genética , Metabolismo , Péptidos , Genética , Metabolismo , Regiones Promotoras Genéticas , Genética , Unión Proteica , Subunidades de Proteína , Genética , Metabolismo , ARN Polimerasa III , Genética , Metabolismo , ARN Mensajero , Genética , Factor de Transcripción STAT3 , Metabolismo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
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