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J Stroke Cerebrovasc Dis ; 33(6): 107687, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38521147

RESUMEN

OBJECTIVE: Recent research indicates that autophagy is essential for the rupture of intracranial aneurysm (IA). This study aimed to examine and validate potential autophagy-related genes (ARGs) in cases of IA using bioinformatics analysis. METHODS: Two expression profiles (GSE54083 and GSE75436) were obtained from the Gene Expression Omnibus database. Differentially expressed ARGs (DEARGs) in cases of IA were screened using GSE75436, and enrichment analysis and Protein-Protein Interaction (PPI) networks were used to identify the hub genes and related pathways. Furthermore, a novel predictive diagnostic signature for IA based on the hub genes was constructed. The area under the Receiver Operating Characteristic curve (AUC) was used to evaluate the signature performance in GSE75436. RESULTS: In total, 75 co-expressed DEARGs were identified in the GSE75436 and GSE54083 dataset (28 upregulated and 47 downregulated genes). Enrichment analysis of DEARGs revealed several enriched terms associated with proteoglycans in cancer and human immunodeficiency virus 1 infection. PPI analysis revealed interactions between these genes. Hub DEARGs included insulin-like growth factor 1, clusters of differentiation 4, cysteine-aspartic acid protease 8, Bcl-2-like protein 11, mouse double mutant 2 homolog, toll-like receptor 4, growth factor receptor-bound protein 2, Jun proto-oncogene, AP-1 transcription factor subunit, hypoxia inducible factor 1 alpha, and erythroblastic oncogene B-2. Notably, the signature showed good performance in distinguishing IA (AUC = 0.87). The sig calibration curves showed good calibration. CONCLUSION: Bioinformatic analysis identified 75 potential DEARGs in cases of IA. This study revealed that IA is affected by autophagy, which could explain the pathogenesis of IA and aid in its diagnosis and treatment. However, future research with experimental validation is necessary to identify potential DEARGs in cases of IA.


Asunto(s)
Autofagia , Biología Computacional , Bases de Datos Genéticas , Perfilación de la Expresión Génica , Redes Reguladoras de Genes , Aneurisma Intracraneal , Mapas de Interacción de Proteínas , Proto-Oncogenes Mas , Aneurisma Intracraneal/genética , Humanos , Mapas de Interacción de Proteínas/genética , Autofagia/genética , Transcriptoma , Proteínas Relacionadas con la Autofagia/genética , Predisposición Genética a la Enfermedad , Valor Predictivo de las Pruebas , Regulación de la Expresión Génica , Transducción de Señal/genética
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