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1.
Virol J ; 21(1): 122, 2024 May 30.
Article En | MEDLINE | ID: mdl-38816865

Hand, Foot and Mouth Disease (HFMD) is a highly contagious viral illness primarily affecting children globally. A significant epidemiological transition has been noted in mainland China, characterized by a substantial increase in HFMD cases caused by non-Enterovirus A71 (EV-A71) and non-Coxsackievirus A16 (CVA16) enteroviruses (EVs). Our study conducts a retrospective examination of 36,461 EV-positive specimens collected from Guangdong, China, from 2013 to 2021. Epidemiological trends suggest that, following 2013, Coxsackievirus A6 (CVA6) and Coxsackievirus A10 (CVA10) have emerged as the primary etiological agents for HFMD. In stark contrast, the incidence of EV-A71 has sharply declined, nearing extinction after 2018. Notably, cases of CVA10 infection were considerably younger, with a median age of 1.8 years, compared to 2.3 years for those with EV-A71 infections, possibly indicating accumulated EV-A71-specific herd immunity among young children. Through extensive genomic sequencing and analysis, we identified the N136D mutation in the 2 A protein, contributing to a predominant subcluster within genogroup C of CVA10 circulating in Guangdong since 2017. Additionally, a high frequency of recombination events was observed in genogroup F of CVA10, suggesting that the prevalence of this lineage might be underrecognized. The dynamic landscape of EV genotypes, along with their potential to cause outbreaks, underscores the need to broaden surveillance efforts to include a more diverse spectrum of EV genotypes. Moreover, given the shifting dominance of EV genotypes, it may be prudent to re-evaluate and optimize existing vaccination strategies, which are currently focused primarily target EV-A71.


Genome, Viral , Genotype , Hand, Foot and Mouth Disease , Phylogeny , China/epidemiology , Humans , Hand, Foot and Mouth Disease/epidemiology , Hand, Foot and Mouth Disease/virology , Child, Preschool , Infant , Retrospective Studies , Female , Male , Child , Molecular Epidemiology , Enterovirus/genetics , Enterovirus/classification , Enterovirus/isolation & purification , Enterovirus A, Human/genetics , Enterovirus A, Human/isolation & purification , Genomics , Incidence , Adolescent , Enterovirus Infections/epidemiology , Enterovirus Infections/virology
2.
Viruses ; 16(4)2024 04 08.
Article En | MEDLINE | ID: mdl-38675915

The enterovirus A71 (EV71) inactivated vaccine is an effective intervention to control the spread of the virus and prevent EV71-associated hand, foot, and mouth disease (HFMD). It is widely administered to infants and children in China. The empty particles (EPs) and full particles (FPs) generated during production have different antigenic and immunogenic properties. However, the antigen detection methods currently used were established without considering the differences in antigenicity between EPs and FPs. There is also a lack of other effective analytical methods for detecting the different particle forms, which hinders the consistency between batches of products. In this study, we analyzed the application of sedimentation velocity analytical ultracentrifugation (SV-AUC) in characterizing the EPs and FPs of EV71. Our results showed that the proportions of the two forms could be quantified simultaneously by SV-AUC. We also determined the repeatability and accuracy of this method and found that both parameters were satisfactory. We assessed SV-AUC for bulk vaccine quality control, and our findings indicated that SV-AUC can be used effectively to analyze the percentage of EPs and FPs and monitor the consistency of the process to ensure the quality of the vaccine.


Enterovirus A, Human , Ultracentrifugation , Enterovirus A, Human/immunology , Enterovirus A, Human/isolation & purification , Ultracentrifugation/methods , Humans , Viral Vaccines/immunology , Vaccines, Inactivated/immunology , Virion/immunology , Virion/isolation & purification , Hand, Foot and Mouth Disease/virology , Hand, Foot and Mouth Disease/prevention & control , China , Quality Control
4.
Nature ; 617(7961): 574-580, 2023 May.
Article En | MEDLINE | ID: mdl-36996871

As of August 2022, clusters of acute severe hepatitis of unknown aetiology in children have been reported from 35 countries, including the USA1,2. Previous studies have found human adenoviruses (HAdVs) in the blood from patients in Europe and the USA3-7, although it is unclear whether this virus is causative. Here we used PCR testing, viral enrichment-based sequencing and agnostic metagenomic sequencing to analyse samples from 16 HAdV-positive cases from 1 October 2021 to 22 May 2022, in parallel with 113 controls. In blood from 14 cases, adeno-associated virus type 2 (AAV2) sequences were detected in 93% (13 of 14), compared to 4 (3.5%) of 113 controls (P < 0.001) and to 0 of 30 patients with hepatitis of defined aetiology (P < 0.001). In controls, HAdV type 41 was detected in blood from 9 (39.1%) of the 23 patients with acute gastroenteritis (without hepatitis), including 8 of 9 patients with positive stool HAdV testing, but co-infection with AAV2 was observed in only 3 (13.0%) of these 23 patients versus 93% of cases (P < 0.001). Co-infections by Epstein-Barr virus, human herpesvirus 6 and/or enterovirus A71 were also detected in 12 (85.7%) of 14 cases, with higher herpesvirus detection in cases versus controls (P < 0.001). Our findings suggest that the severity of the disease is related to co-infections involving AAV2 and one or more helper viruses.


Adenovirus Infections, Human , Coinfection , Dependovirus , Hepatitis , Child , Humans , Acute Disease , Adenovirus Infections, Human/epidemiology , Adenovirus Infections, Human/virology , Coinfection/epidemiology , Coinfection/virology , Dependovirus/genetics , Dependovirus/isolation & purification , Epstein-Barr Virus Infections/epidemiology , Epstein-Barr Virus Infections/virology , Hepatitis/epidemiology , Hepatitis/virology , Herpesvirus 4, Human/isolation & purification , Herpesvirus 6, Human/isolation & purification , Enterovirus A, Human/isolation & purification , Helper Viruses/isolation & purification
5.
Sci Rep ; 12(1): 593, 2022 01 12.
Article En | MEDLINE | ID: mdl-35022489

Recombination plays important roles in the genetic diversity and evolution of Enterovirus A71 (EV-A71). The phylogenetics of EV-A71 in mainland China found that one strain DL71 formed a new subgenotype C6 with unknown origin. This study investigated the detailed genetic characteristics of the new variant. DL71 formed a distinct cluster within genotype C based on the genome and individual genes (5'UTR, VP4, VP1, 2A, 2B, 2C, 3D, and 3'UTR). The average genetic distances of the genome and individual genes (VP3, 2A, 2B, 2C, 3A, 3C, and 3D) between DL71 and reference strains were greater than 0.1. Nine recombination events involving smaller fragments along DL71 genome were detected. The strains Fuyang-0805a (C4) and Tainan/5746/98 (C2) were identified as the parental strains of DL71. In the non-recombination regions, DL71 had higher identities with Fuyang-0805a than Tainan/5746/98, and located in the cluster with C4 strains. However, in the recombination regions, DL71 had higher identities with Tainan/5746/98 than Fuyang-0805a, and located in the cluster with C2 strains. Thus, DL71 was a novel multiple inter-subgenotype recombinant derived from the dominant subgenotype C4 and the sporadic subgenotype C2 strains. Monitoring the emergence of new variants by the whole-genome sequencing remains essential for preventing disease outbreaks and developing new vaccines.


Enterovirus A, Human/genetics , Reassortant Viruses/genetics , Capsid Proteins/genetics , China , Enterovirus A, Human/classification , Enterovirus A, Human/isolation & purification , Evolution, Molecular , Genome, Viral , Genotype , Humans , Phylogeny , Reassortant Viruses/classification , Reassortant Viruses/isolation & purification , Species Specificity
6.
J Med Virol ; 94(2): 587-593, 2022 02.
Article En | MEDLINE | ID: mdl-30942492

Brain dysfunction is a prerequisite for critical complications in children with hand, foot, and mouth disease (HFMD). Aquaporin 4 (AQP-4) may be involved in the pathological process of cerebral oedema and injury in children with severe and critical HFMD. This study aimed to assess the association of AQP-4 with the severity of enterovirus 71 (EV71)-associated HFMD. Children with EV71-infected HFMD were divided into a common group (clinical stage 1), a severe group (clinical stage 2), and a critical group (clinical stage 3) according to Chinese guidelines. The levels of AQP-4, interleukin-6 (IL-6), norepinephrine (NE), and neuron-specific enolase (NSE) before and after treatment were tested. Serum AQP-4, IL-6, NE, and NSE levels showed significant differences among the critical, severe, and common groups before and after treatment (P < 0.01). No significant differences in AQP-4 levels in cerebrospinal fluid (CSF) were observed between the critical and severe groups before and after treatment, but the CSF AQP-4 levels in these two groups were higher than those in the common group before treatment (P < 0.01). Serum AQP-4 levels, but not CSF AQP-4 levels, closely correlated with serum IL-6, NE, and NSE levels. These results suggest that the level of AQP-4 in serum, but not in CSF, is a candidate biomarker for evaluating the severity and prognosis of EV71-associated HFMD.


Aquaporin 4/blood , Aquaporin 4/cerebrospinal fluid , Enterovirus A, Human/isolation & purification , Hand, Foot and Mouth Disease/virology , Biomarkers/blood , Biomarkers/cerebrospinal fluid , Child, Preschool , Enterovirus Infections , Female , Hand, Foot and Mouth Disease/blood , Hand, Foot and Mouth Disease/cerebrospinal fluid , Humans , Infant , Interleukin-6/blood , Male , Norepinephrine/blood , Phosphopyruvate Hydratase/blood , Prognosis , ROC Curve , Severity of Illness Index
7.
J Med Virol ; 94(2): 601-609, 2022 02.
Article En | MEDLINE | ID: mdl-34387895

Hand, foot, and mouth disease (HFMD) is a contagious disease that threatens the health of children under 5 years of age. Coxsackievirus A10 (CV-A10) is one of the main pathogens of HFMD. Currently, preventive vaccines and specific therapeutic drugs are not available for CV-A10. In this study, a total of 327 stool specimens were collected from pediatric patients from 2009 to 2017 during HFMD surveillance, among which 14 CV-A10 strains could only be isolated from rhabdomyosarcoma cells, but not from KMB17 and Vero cells. Through adaptive culture, 2 and 11 CV-A10 strains were recovered from Vero and KMB17 cell cultures, respectively. The growth of CV-A10 strains in Vero cells was better than that in KMB17 cells. The 14 CV-A10 strains belonged to the F genotype, and the nucleotides and amino acids of their complete genomes shared 92.6%-96.3% and 98.4%-98.9% identities, respectively. The different CV-A10 strains exhibited varying virulence in vivo, but had similar effects on tissue injury, with the hind limb muscles, kidneys, and lungs being severely affected. Additionally, the hind limb muscles had the highest viral loads. CV-A10 was found to exhibit a strong tropism to muscle tissue. The results of this study are critical to developing vaccines against CV-A10 infections.


Enterovirus A, Human/genetics , Hand, Foot and Mouth Disease/virology , Animals , Child, Preschool , Chlorocebus aethiops , Enterovirus A, Human/isolation & purification , Female , Genotype , Humans , Male , Mice , Mice, Inbred BALB C , Vero Cells
8.
Sci Rep ; 11(1): 17751, 2021 09 07.
Article En | MEDLINE | ID: mdl-34493781

Enterovirus-A71 (EV-A71) associated Hand, foot and mouth disease (HFMD) is a highly contagious viral infection affecting children in Asia-Pacific region and has become a major threat to public health. Although several EV-A71 genotypes (C, D, and G) were isolated in India in recent years, no recognizable outbreak of EV-A71 caused HFMD, Acute Flaccid paralysis (AFP) or encephalitis have been reported so far. It is essential to study the pathogenicity or cell tropism of these Indian isolates in order to understand their tendency to cause disease. We investigated the susceptibility and cytokine responses of indigenous EV-A71 genotypes (D and G) isolated from cases of AFP and genotype C viruses isolated from cases of HFMD and encephalitis, in human cells in-vitro. Although all three EV-A71 genotypes could infect and replicate in human muscle and neuronal cells, the genotype D virus showed a delayed response in human neuronal cells. Quantification of cytokine secretion in response to these isolates followed by confirmation with gene expression assays in human neuronal cells revealed significantly higher secretion of pro-inflammatory cytokines TNF-α IL-8, IL-6, IP-10 (p < 0.001) in G genotype infected cells as compared to pathogenic C genotypes whereas the genotype D virus could not induce any of the inflammatory cytokines. These findings will help to better understand the host response to indigenous EV-A71 genotypes for management of future EV-A71 outbreaks in India, if any.


Cytokines/biosynthesis , Enterovirus A, Human/pathogenicity , Hand, Foot and Mouth Disease/virology , Neurons/virology , Acute Disease , Adult , Cell Line, Tumor , Child , Cytokines/genetics , Cytopathogenic Effect, Viral , Disease Outbreaks , Disease Susceptibility , Encephalitis, Viral/epidemiology , Encephalitis, Viral/virology , Enterovirus A, Human/classification , Enterovirus A, Human/genetics , Enterovirus A, Human/isolation & purification , Female , Gene Expression Regulation, Viral , Genotype , Hand, Foot and Mouth Disease/epidemiology , Humans , India/epidemiology , Male , Middle Aged , Neurons/metabolism , Paraplegia/epidemiology , Paraplegia/virology , Viral Tropism
9.
PLoS One ; 16(8): e0255846, 2021.
Article En | MEDLINE | ID: mdl-34383835

Human enteroviruses (EVs) comprise more than 100 types of coxsackievirus, echovirus, poliovirus and numbered enteroviruses, which are mainly transmitted by the faecal-oral route leading to diverse diseases such as aseptic meningitis, encephalitis, and acute flaccid paralysis, among others. Since enteroviruses are excreted in faeces, wastewater-based epidemiology approaches are useful to describe EV diversity in a community. In Uruguay, knowledge about enteroviruses is extremely limited. This study assessed the diversity of enteroviruses through Illumina next-generation sequencing of VP1-amplicons obtained by RT-PCR directly applied to viral concentrates of 84 wastewater samples collected in Uruguay during 2011-2012 and 2017-2018. Fifty out of the 84 samples were positive for enteroviruses. There were detected 27 different types belonging to Enterovirus A species (CVA2-A6, A10, A16, EV-A71, A90), Enterovirus B species (CVA9, B1-B5, E1, E6, E11, E14, E21, E30) and Enterovirus C species (CVA1, A13, A19, A22, A24, EV-C99). Enterovirus A71 (EV-A71) and echovirus 30 (E30) strains were studied more in depth through phylogenetic analysis, together with some strains previously detected by us in Argentina. Results unveiled that EV-A71 sub-genogroup C2 circulates in both countries at least since 2011-2012, and that the C1-like emerging variant recently entered in Argentina. We also confirmed the circulation of echovirus 30 genotypes E and F in Argentina, and reported the detection of genotype E in Uruguay. To the best of our knowledge this is the first report of the EV-A71 C1-like emerging variant in South-America, and the first report of EV-A71 and E30 in Uruguay.


Enterovirus A, Human/genetics , Enterovirus B, Human/genetics , Genetic Linkage/genetics , Capsid Proteins/genetics , Capsid Proteins/metabolism , Enterovirus A, Human/classification , Enterovirus A, Human/isolation & purification , Enterovirus B, Human/classification , Enterovirus B, Human/isolation & purification , Enterovirus C, Human/classification , Enterovirus C, Human/genetics , Enterovirus C, Human/isolation & purification , Genotype , Humans , Phylogeny , RNA, Viral/chemistry , RNA, Viral/genetics , RNA, Viral/metabolism , Seasons , South America , Uruguay , Wastewater/virology
10.
J Neuroimmunol ; 358: 577639, 2021 09 15.
Article En | MEDLINE | ID: mdl-34214953

We present the case of a young woman being treated with rituximab for rheumatoid arthritis who developed a severe enteroviral meningoencephalitis and acute flaccid myelitis (AFM). Cerebrospinal fluid (CSF) and stool reverse transcription-polymerase chain reaction (RT-PCR) testing confirmed the diagnosis and additional sequencing studies performed at the CDC further characterized the enterovirus as enterovirus A71 (EV-A71). After treatment with intravenous immunoglobulin (IVIg) and fluoxetine (based on previous reports of possible efficacy) the patient experienced a remarkable improvement over time. This case highlights the importance of considering enteroviral infection in patients treated with rituximab, depicts a possible clinical course of enteroviral meningoencephalitis and AFM, and illustrates the importance of testing multiple sites for enterovirus infection (CSF, stool, nasopharyngeal swab, blood). Here we present the case with a brief review of the literature pertaining to EV-A71.


Central Nervous System Viral Diseases/diagnostic imaging , Enterovirus A, Human/isolation & purification , Enterovirus Infections/diagnostic imaging , Immunologic Factors/therapeutic use , Meningoencephalitis/diagnostic imaging , Myelitis/diagnostic imaging , Neuromuscular Diseases/diagnostic imaging , Rituximab/therapeutic use , Adult , Central Nervous System Viral Diseases/drug therapy , Central Nervous System Viral Diseases/virology , Enterovirus Infections/drug therapy , Female , Humans , Immunologic Factors/adverse effects , Meningoencephalitis/drug therapy , Meningoencephalitis/virology , Myelitis/drug therapy , Myelitis/virology , Neuromuscular Diseases/drug therapy , Neuromuscular Diseases/virology , Rituximab/adverse effects
11.
Arch Virol ; 166(8): 2209-2216, 2021 Aug.
Article En | MEDLINE | ID: mdl-34086143

Enterovirus A71 (EV-A71) can cause hand, foot, and mouth disease (HFMD) in children and may be associated with severe neurological complications. There have been numerous reports of increased incidence of EV-A71 subgenogroup C1 (EV-A71 C1) infections associated with neurological diseases since the first occurrence in Germany in 2015. Here, we describe 11 full-length genome sequences of 2019 EV-A71 C1 strains isolated from HFMD patients in Thailand from 2019 to early 2020. The genetic evolution of 2019 EV-A71 C1 was traced in the outbreaks, and the emergence of multiple lineages was detected. Our results demonstrated that 2019 EV-A71 C1 from Thailand emerged through recombination between its nonstructural protein gene and those of other EV-A genotypes. Bayesian-based phylogenetic analysis showed that the 2019 EV-A71 C1 Thai strains share a common ancestor with variants in Europe (Denmark and France). The substitution rate for the 2019 EV-A71 C1 genome was estimated to be 4.38 × 10-3 substitutions/(site∙year-1) (95% highest posterior density interval: 3.84-4.94 × 10-3 substitutions/[site∙year-1]), approximating that observed between previous EV-A71 C1 outbreaks. These data are essential for understanding the evolution of EV-A C1 during the ongoing HFMD outbreak and may be relevant to disease outcomes in children worldwide.


Enterovirus A, Human/classification , Genetic Variation , Hand, Foot and Mouth Disease/virology , Whole Genome Sequencing/methods , Child , Child, Preschool , Denmark , Enterovirus A, Human/genetics , Enterovirus A, Human/isolation & purification , Evolution, Molecular , Female , France , Genome, Viral , Germany , Humans , Infant , Male , Phylogeny , Phylogeography , Thailand
12.
Arch Virol ; 166(8): 2263-2266, 2021 Aug.
Article En | MEDLINE | ID: mdl-34008106

Enterovirus 71 (EV71) has caused large hand, foot, and mouth disease (HFMD) epidemics among young children, and EV71 infection is the leading cause of severe HFMD cases and deaths. In mainland China, the prevalence and risk factors of non-C4 EV71 strains are still unclear. In this study, we monitored non-C4 strains over a 10-year HFMD epidemiological surveillance period in Xiamen. The 5'UTR and VP1 coding region of EV71 strains were amplified by RT-nested PCR and sequenced. Thirty-two non-C4 EV71 strains were identified during 2009-2018. This study provides important information about the prevalence of EV71 in China that will be applicable for development of vaccines and diagnostic reagents as well as establishment of policies for HFMD prevention and control.


Capsid Proteins/genetics , Enterovirus A, Human/classification , Hand, Foot and Mouth Disease/epidemiology , 5' Untranslated Regions , Child , China/epidemiology , Enterovirus A, Human/genetics , Enterovirus A, Human/isolation & purification , Hand, Foot and Mouth Disease/virology , Humans , Male , Phylogeny , Prevalence , Reverse Transcriptase Polymerase Chain Reaction
13.
BMC Infect Dis ; 21(1): 208, 2021 Feb 25.
Article En | MEDLINE | ID: mdl-33632141

BACKGROUND: Hand, foot, and mouth disease (HFMD) is an acute infectious disease caused by human enterovirus 71 (EV71), coxsackievirus, or echovirus, which is particularly common in preschool children. Severe HFMD is prone to cause pulmonary edema before progressing to respiratory and circulatory failure; thus hemodynamic monitoring and fluid management are important to the treatment process. METHODS: We did a review of young patients who had been successfully treated in our department for severe HFMD, which had been caused by EV71. A total of 20 patients met the inclusion criteria. Eight cases were monitored by the pulse indicator continuous cardiac output (PiCCO) technique, and fluid management was administered according to its parameters. With regard to the treatment with PiCCO monitoring, patients were divided into two groups: the PiCCO group (8 patients) and the control group (12 patients). The groups were then compared comprehensively to evaluate whether PiCCO monitoring could improve patients' clinical outcomes. RESULTS: After analysis, the findings informed that although PiCCO failed to shorten the length of ICU stay, reduce the days of vasoactive drug usage, or lower the number of cases which required mechanical ventilation, PiCCO did reduce the incidence of fluid overload (p = 0.085) and shorten the days of mechanical ventilation (p = 0.028). After effective treatment, PiCCO monitoring indicated that the cardiac index (CI) increased gradually(p < 0.0001), in contrast to their pulse (P, p < 0.0001), the extra vascular lung water index (EVLWI, p < 0.0001), the global end diastolic volume index (GEDVI, p = 0.0043), and the systemic vascular resistance index (SVRI, p < 0.0001), all of which decreased gradually. CONCLUSION: Our study discovered that PiCCO hemodynamic monitoring in young children with severe HFMD has some potential benefits, such as reducing fluid overload and the duration of mechanical ventilation. However, whether it can ameliorate the severity of the disease, reduce mortality, or prevent multiple organ dysfunction remain to be further investigated.


Fluid Therapy , Hand, Foot and Mouth Disease/physiopathology , Hand, Foot and Mouth Disease/therapy , Hemodynamics/physiology , Monitoring, Physiologic/methods , Cardiac Output/physiology , Child, Preschool , Enterovirus A, Human/isolation & purification , Female , Hand, Foot and Mouth Disease/diagnosis , Heart Rate/physiology , Humans , Infant , Male , Pulmonary Edema/diagnosis , Pulmonary Edema/physiopathology , Pulmonary Edema/therapy , Retrospective Studies , Treatment Outcome
14.
J Med Virol ; 93(8): 5163-5166, 2021 08.
Article En | MEDLINE | ID: mdl-33605462

Enteroviruses A71 (EVs-A71) are known to cause serious neurological infections, especially in the pediatric population. We report here eight cases of EV-A71 infection diagnosed in Marseille over the past 2 years (seven cases in 2019 and one case in 2020). Only children under 5 years of age were affected, including one case of acute flaccid paralysis. Viral RNA was detected by RT-PCR in peripheral samples for all cases (feces and upper respiratory samples). Phylogenetic analyses based on VP1 and 2C3C coding regions revealed that all these cases of EV-A71 infection were caused by viruses belonging to the subgenogroup C1 that currently circulates in Europe and that these viruses are genetically closed to other EVs-A71 recently detected in European countries. These data therefore reinforce the usefulness of the enterovirus surveillance network and the need for systematic screening for EV-A71 in case of an enteroviral infection. This study therefore suggests that the systematic screening for EV-A71 in case of enteroviral infection could provide additional data for enterovirus surveillance networks.


Enterovirus A, Human/isolation & purification , Enterovirus Infections/virology , Child, Preschool , Enterovirus A, Human/classification , Enterovirus A, Human/genetics , Enterovirus Infections/diagnosis , Enterovirus Infections/therapy , France , Genome, Viral/genetics , Genotype , Humans , Infant , Infant, Newborn , Paralysis/therapy , Paralysis/virology , Phylogeny , RNA, Viral/genetics , Retrospective Studies , Treatment Outcome , Viral Proteins/genetics
15.
Virus Genes ; 57(2): 172-180, 2021 Apr.
Article En | MEDLINE | ID: mdl-33575934

Surveillance of recombinant enterovirus 71 (EV71) and subgenotype replacement is vital for preventing and controlling hand, foot, and mouth disease (HFMD) outbreaks. Despite this, data on recombinant variants and phylogeny of circulating EV71 strains in mainland China are limited. In this study, recombinant variants of EV71 were identified in mainland China from 2009 to 2018. Phylogenetic analysis indicated that except for individual strains (CQ2014-86/CQ/CHN/2014 and EV71/Xiamen/2009 (B5)), almost all of the EV71 strains in mainland China belonged to the subgenotype C4a. Analysing complete genome sequences of 196 EV71 isolates, 3 intertypic recombination strains (VR1432, 30-2/2015/BJ, and Guangdong-2009) and 5 intratypic recombination strains (EV71/P1034/2013, VR1432, Henan-ZMD/CHN/2012, Hubei-WH/CHN/2012, and EV71/P868/2013/China) were identified among naturally circulating EV71. The breakpoints of these recombinant strains were located within the P1, P2, and P3 encoding regions. Notably, a double recombinant (VR1432) resulting from recombination between EV71 subgenotype C4a and C4b strain SHZH98 and a CA8 strain Donovan was identified. This study reports these specific intertypic and intratypic recombination events for the first time highlighting the importance of genetic recombination in the emergence of new enterovirus variants.


Enterovirus A, Human/genetics , Enterovirus Infections/virology , Genome, Viral , China , Enterovirus A, Human/classification , Enterovirus A, Human/isolation & purification , Evolution, Molecular , Humans , Recombination, Genetic
16.
Medicine (Baltimore) ; 100(7): e24855, 2021 Feb 19.
Article En | MEDLINE | ID: mdl-33607859

BACKGROUND: To analyze the prevalence of latent infection of pathogens of hand, foot, and mouth disease (HFMD) in Chinese healthy population and its influencing factors, so as to provide reference for the prevention and control of HFMD. METHODS: A systematic literature searching about the incidence of latent infection of HFMD was conducted in Chinese and English databases. The inclusion and exclusion criteria of the retrieved literature were established. The qualified literatures were screened and the data were extracted. The pooled rate and its 95% confidence interval was used to assess the latent infection rate of HFMD pathogens in healthy Chinese population, and subgroup analysis was conducted based on gender and age. All statistical analyses were performed using the STATA version 12.0 software. RESULTS: A total of 31 literatures were included in this meta-analysis. The recessive infection rate of HFMD pathogens reported in the literature of Chinese healthy people ranged from 4.59% to 44.12%. The results of meta-analysis showed that the latent infection rate of human enteroviruses (HEVs) in healthy Chinese population was 17.5% (14.9-20.1%), among which, the latent infection rates of EV-A71, CV-A16, and other HEVs were 3.3% (2.2-4.4%), 1.7% (1.0-2.5%), and 15.1% (11.1-17.1%), respectively. The latent infection rates of HEVs in healthy men and women in China were 16.7% (12.9-20.4%) and 14.4% (10.8-18.0%), respectively. The latent infection rates of HEVs in the healthy population aged 0 to 5 years and over 5 years were 24.4% (20.4-28.5%) and 9.4% (6.5-12.2%), respectively. Meta regression showed that the factors affecting the latent infection rate of HEVs in Chinese healthy population included sampling period, sampling area, and study population. CONCLUSION: The latent infection rate of HEVs is high in healthy people in China, but it is mainly caused by other enteroviruses. The latent infection rate of HEVs in male was higher than that of female and was greater in people aged 0 to 5 than that of aged over 5 years. Limited by the quantity and quality of the included studies, more high-quality studies are needed for further verification in the future.


Asymptomatic Infections/epidemiology , Hand, Foot and Mouth Disease/epidemiology , Healthy Volunteers/statistics & numerical data , Latent Infection/epidemiology , Adolescent , Adult , Case-Control Studies , Child , Child, Preschool , China/epidemiology , Cross-Sectional Studies , Data Management , Enterovirus/genetics , Enterovirus/isolation & purification , Enterovirus/pathogenicity , Enterovirus A, Human/genetics , Enterovirus A, Human/isolation & purification , Enterovirus A, Human/pathogenicity , Enterovirus Infections/epidemiology , Enterovirus Infections/virology , Female , Hand, Foot and Mouth Disease/prevention & control , Humans , Incidence , Infant , Infant, Newborn , Latent Infection/virology , Male , Prevalence , Young Adult
17.
Cell Mol Immunol ; 18(2): 472-483, 2021 02.
Article En | MEDLINE | ID: mdl-33441966

Virus-induced asthma is prevalent among children, but its underlying mechanisms are unclear. Accumulated evidence indicates that early-life respiratory virus infection increases susceptibility to allergic asthma. Nonetheless, the relationship between systemic virus infections, such as enterovirus infection, and the ensuing effects on allergic asthma development is unknown. Early-life enterovirus infection was correlated with higher risks of allergic diseases in children. Adult mice exhibited exacerbated mite allergen-induced airway inflammation following recovery from EV-A71 infection in the neonatal period. Bone marrow-derived macrophages (BMDMs) from recovered EV-A71-infected mice showed sustained innate immune memory (trained immunity) that could drive naïve T helper cells toward Th2 and Th17 cell differentiation when in contact with mites. Adoptive transfer of EV-A71-trained BMDMs induced augmented allergic inflammation in naïve recipient mice, which was inhibited by 2-deoxy-D-glucose (2-DG) pretreatment, suggesting that trained macrophages following enterovirus infection are crucial in the progression of allergic asthma later in life.


Allergens/adverse effects , Asthma/pathology , Enterovirus A, Human/isolation & purification , Enterovirus Infections/complications , Immunity, Innate , Inflammation/pathology , Macrophages/immunology , Animals , Animals, Newborn , Asthma/epidemiology , Asthma/immunology , Asthma/virology , Cell Differentiation , Child , Child, Preschool , China/epidemiology , Enterovirus Infections/virology , Humans , Immunologic Memory , Inflammation/epidemiology , Inflammation/immunology , Inflammation/virology , Macrophages/virology , Mice , Mice, Inbred BALB C , Pyroglyphidae , Th17 Cells/immunology , Th17 Cells/virology , Th2 Cells/immunology , Th2 Cells/virology
18.
Viruses ; 13(1)2021 Jan 07.
Article En | MEDLINE | ID: mdl-33430521

We describe the complete capsid of a genotype C1-like Enterovirus A71 variant recovered from wastewater in a neighborhood in the greater Tempe, Arizona area (Southwest United States) in May 2020 using a pan-enterovirus amplicon-based high-throughput sequencing strategy. The variant seems to have been circulating for over two years, but its sequence has not been documented in that period. As the SARS-CoV-2 pandemic has resulted in changes in health-seeking behavior and overwhelmed pathogen diagnostics, our findings highlight the importance of wastewater-based epidemiology (WBE ) as an early warning system for virus surveillance.


Capsid Proteins/genetics , Enterovirus A, Human/genetics , Enterovirus A, Human/isolation & purification , High-Throughput Nucleotide Sequencing/methods , Wastewater-Based Epidemiological Monitoring , Wastewater/virology , Arizona/epidemiology , Capsid/chemistry , Enterovirus Infections/epidemiology , Enterovirus Infections/virology , Humans , Molecular Epidemiology , Pandemics , Phylogeny
19.
Pediatr Infect Dis J ; 40(4): 289-294, 2021 04 01.
Article En | MEDLINE | ID: mdl-33181780

BACKGROUND: As the highly contagious hand, foot and mouth disease (HFMD) spreads rapidly among children, isolation is the most effective way to control its spread. However, studies on the duration of virus shedding of the HFMD-related enterovirus and a reasonable quarantine period for HFMD patients are inconsistent. METHODS: We undertook a systematic review and meta-analysis evaluating the viral shedding of patients with HFMD caused by Enterovirus 71 (EV71) and coxsackievirus A16 (CVA16) and coxsackievirus A6. RESULTS: A total of 17 observational studies evaluating 626 participants were included. In the first 5 weeks after onset, the pooled virus positive rate in specimens of EV71-related patients decreased from 0.79 (P < 0.001 for heterogeneity) to 0.38 (P < 0.001 for heterogeneity). The positive rate of CVA16 was reduced from 0.91 (P < 0.001 for heterogeneity) to 0.29 (P < 0.001 for heterogeneity). The positive rates of CVA16 and coxsackievirus A6 were approximately 50% in the third week after onset, while a 50% positive rate appeared in the fourth week in EV71 related cases. CONCLUSIONS: We found the positive rates of virus shedding were still high among the patients released from quarantine, and the duration of viral shedding was inconsistent among HFMD patients caused by different serotypes. Our findings provide comprehensive evidence for a possible flexible quarantine period according to the serotype.


Enterovirus A, Human/isolation & purification , Enterovirus Infections/virology , Enterovirus/isolation & purification , Hand, Foot and Mouth Disease/virology , Virus Shedding , Child , Enterovirus/genetics , Enterovirus A, Human/genetics , Humans , Infant , Observational Studies as Topic
20.
Expert Rev Anti Infect Ther ; 19(6): 733-747, 2021 06.
Article En | MEDLINE | ID: mdl-33183118

Introduction: Hand, foot, and mouth disease caused by enterovirus A71 (EV-A71) is more frequently associated with neurological complications and deaths compared to other enteroviruses.Areas covered: The authors discuss current understanding of the neuropathogenesis of EV-A71 based on various clinical, human, and animal model studies. The authors discuss the important advancements in virus entry, virus dissemination, and neuroinvasion. The authors highlight the role of host immune system, host genetic factors, viral quasispecies, and heparan sulfate in EV-A71 neuropathogenesis.Expert opinion: Comparison of EV-A71 with EV-D68 and PV shows similarity in primary target sites and dissemination to the central nervous system. More research is needed to understand cellular tropisms, persistence of EV-A71, and other possible invasion routes. EV-A71 infection has varied clinical manifestations which may be attributed to multiple receptors usage. Future development of antivirals and vaccines should target neurotropic enteroviruses. Repurposing drug and immunomodulators used in combination could reduce the severity of EV-A71 infection. Only a few drugs have been tested in clinical trials, and in the absence of antiviral and vaccines (except China), active virus surveillance, good hand hygiene, and physical distancing should be advocated. A better understanding of EV-A71 neuropathogenesis is critical for antiviral and multivalent vaccines development.


Enterovirus A, Human/isolation & purification , Hand, Foot and Mouth Disease/complications , Nervous System Diseases/virology , Animals , Antiviral Agents/administration & dosage , Coxsackievirus Infections/complications , Coxsackievirus Infections/virology , Hand, Foot and Mouth Disease/virology , Humans , Nervous System Diseases/drug therapy , Viral Vaccines/administration & dosage , Virus Internalization
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