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1.
Sci Rep ; 11(1): 7230, 2021 03 31.
Article En | MEDLINE | ID: mdl-33790319

Generally, animals extract nutrients from food by degradation using digestive enzymes. Trypsin and chymotrypsin, one of the major digestive enzymes in vertebrates, are pancreatic proenzymes secreted into the intestines. In this investigation, we report the identification of a digestive teleost enzyme, a pancreatic astacin that we termed pactacin. Pactacin, which belongs to the astacin metalloprotease family, emerged during the evolution of teleosts through gene duplication of astacin family enzymes containing six cysteine residues (C6astacin, or C6AST). In this study, we first cloned C6AST genes from pot-bellied seahorse (Hippocampus abdominalis) and analyzed their phylogenetic relationships using over 100 C6AST genes. Nearly all these genes belong to one of three clades: pactacin, nephrosin, and patristacin. Genes of the pactacin clade were further divided into three subclades. To compare the localization and functions of the three pactacin subclades, we studied pactacin enzymes in pot-bellied seahorse and medaka (Oryzias latipes). In situ hybridization revealed that genes of all three subclades were commonly expressed in the pancreas. Western blot analysis indicated storage of pactacin pro-enzyme form in the pancreas, and conversion to the active forms in the intestine. Finally, we partially purified the pactacin from digestive fluid, and found that pactacin is novel digestive enzyme that is specific in teleosts.


Enzyme Precursors , Fish Proteins , Gene Expression Regulation, Enzymologic , Metalloendopeptidases , Oryzias , Pancreas/enzymology , Smegmamorpha , Amino Acid Sequence , Animals , Cloning, Molecular , Enzyme Precursors/biosynthesis , Enzyme Precursors/genetics , Fish Proteins/biosynthesis , Fish Proteins/genetics , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Oryzias/genetics , Oryzias/metabolism , Sequence Homology, Amino Acid , Smegmamorpha/genetics , Smegmamorpha/metabolism
2.
Cancer Metastasis Rev ; 38(3): 347-356, 2019 09.
Article En | MEDLINE | ID: mdl-31482488

A crucial step for tumor cell extravasation and metastasis is the migration through the extracellular matrix, which requires proteolytic activity. Hence, proteases, particularly matrix metalloproteases (MMPs), have been discussed as therapeutic targets and their inhibition should diminish tumor growth and metastasis. The metalloproteases meprin α and meprin ß are highly abundant on intestinal enterocytes and their expression was associated with different stages of colorectal cancer. Due to their ability to cleave extracellular matrix (ECM) components, they were suggested as pro-tumorigenic enzymes. Additionally, both meprins were shown to have pro-inflammatory activity by cleaving cytokines and their receptors, which correlates with chronic intestinal inflammation and associated conditions. On the other hand, meprin ß was identified as an essential enzyme for the detachment and renewal of the intestinal mucus, important to prevent bacterial overgrowth and infection. Considering this, it is hard to estimate whether high activity of meprins is generally detrimental or if these enzymes have also protective functions in certain cancer types. For instance, for colorectal cancer, patients with high meprin ß expression in tumor tissue exhibit a better survival prognosis, which is completely different to prostate cancer. This demonstrates that the very same enzyme may have contrary effects on tumor initiation and growth, depending on its tissue and subcellular localization. Hence, precise knowledge about proteolytic enzymes is required to design the most efficient therapeutic options for cancer treatment. In this review, we summarize the current findings on meprins' functions, expression, and cancer-associated variants with possible implications for tumor progression and metastasis.


Metalloendopeptidases/metabolism , Neoplasms/enzymology , Neoplasms/pathology , Animals , Humans , Metalloendopeptidases/biosynthesis , Neoplasm Metastasis , Tumor Microenvironment
3.
Med Hypotheses ; 131: 109309, 2019 Oct.
Article En | MEDLINE | ID: mdl-31443781

Stroke and traumatic brain injury (TBI) are significant clinical problems characterized by high rate of mortality and long-lasting disabilities, and an unmet need for new treatments. Current experimental stroke and TBI research are evolving to focus more on understanding the brain's self-protective mechanisms to meet the critical need of developing new therapies for these disorders. In this hypothesis-based manuscript, I provide several lines of evidence that peptidase neurolysin (Nln) is one of the brain's potent, self-protective mechanisms promoting preservation and recovery of the brain after acute injury. Based on published experimental observations and ongoing studies in our laboratory, I posit that Nln is a compensatory and cerebroprotective mechanism in the post-stroke/TBI brain that functions to process a diverse group of extracellular neuropeptides and by that to reduce excitotoxicity, oxidative stress, edema formation, blood brain barrier hyper-permeability, and neuroinflammation. If this hypothesis is correct, Nln could potentially serve as a single therapeutic target to modulate the function of multiple targets, the involved neuropeptide systems, critically involved in various mechanisms of brain injury and cerebroprotection/restoration. Such multi-pathway target would be highly desired for pharmacotherapy of stroke and TBI, because targeting one pathophysiological pathway has proven to be ineffective for such complex disorders.


Brain Injuries, Traumatic/metabolism , Metalloendopeptidases/physiology , Nerve Tissue Proteins/physiology , Neuropeptides/metabolism , Stroke/metabolism , Acute Disease , Animals , Brain Injuries, Traumatic/physiopathology , Cell Death , Cell Hypoxia , Cells, Cultured , Cerebral Cortex/embryology , Cerebral Cortex/metabolism , Genetic Therapy , Humans , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Mice , Nerve Tissue Proteins/biosynthesis , Nerve Tissue Proteins/genetics , Neurons/drug effects , Neurons/metabolism , Neurons/pathology , Neurotoxins/pharmacology , Olfactory Bulb/metabolism , Oxidative Stress , Oxygen/pharmacology , Rats , Recombinant Proteins/metabolism , Renin-Angiotensin System/physiology , Stroke/physiopathology , Stroke/therapy , Up-Regulation
4.
Pathog Dis ; 76(4)2018 06 01.
Article En | MEDLINE | ID: mdl-29684130

Clostridial neurotoxins, which include botulinum neurotoxins (BoNTs) and tetanus neurotoxins, have evolved a remarkably sophisticated structure and molecular mechanism fine-tuned for the targeting and cleavage of vertebrate neuron substrates leading to muscular paralysis. How and why did this toxin evolve? From which ancestral proteins are BoNTs derived? And what is, or was, the primary ecological role of BoNTs in the environment? In this article, we examine these questions in light of recent studies identifying homologs of BoNTs in the genomes of non-clostridial bacteria, including Weissella, Enterococcus and Chryseobacterium. Genomic and phylogenetic analysis of these more distantly related toxins suggests that they are derived from ancient toxin lineages that predate the evolution of BoNTs and are not limited to the Clostridium genus. We propose that BoNTs have therefore evolved from a precursor family of BoNT-like toxins, and ultimately from non-neurospecific toxins that cleaved different substrates (possibly non-neuronal SNAREs). Comparison of BoNTs with these related toxins reveals several unique molecular features that underlie the evolution of BoNT's unique function, including functional shifts involving all four domains, and gain of the BoNT gene cluster associated proteins. BoNTs then diversified to produce the existing serotypes, including TeNT, and underwent repeated substrate shifts from ancestral VAMP2 specificity to SNAP25 specificity at least three times in their history. Finally, similar to previous proposals, we suggest that one ecological role of BoNTs could be to create a paralytic phase in vertebrate decomposition, which provides a competitive advantage for necrophagous scavengers that in turn facilitate the spread of Clostridium botulinum and its toxin.


Clostridium botulinum/genetics , Clostridium tetani/genetics , Gene Expression Regulation, Bacterial , Genome, Bacterial , Metalloendopeptidases/genetics , Tetanus Toxin/genetics , Chryseobacterium/classification , Chryseobacterium/genetics , Chryseobacterium/pathogenicity , Clostridium botulinum/classification , Clostridium botulinum/pathogenicity , Clostridium tetani/classification , Clostridium tetani/pathogenicity , Enterococcus/classification , Enterococcus/genetics , Enterococcus/pathogenicity , Evolution, Molecular , Genetic Loci , Host-Pathogen Interactions , Humans , Metalloendopeptidases/biosynthesis , Multigene Family , Phylogeny , Tetanus Toxin/biosynthesis , Weissella/classification , Weissella/genetics , Weissella/pathogenicity
5.
J Bacteriol ; 200(7)2018 04 01.
Article En | MEDLINE | ID: mdl-29339417

Septicemia-causing Vibrio vulnificus produces at least three exoproteases, VvpE, VvpS, and VvpM, all of which participate in interactions with human cells. Expression of VvpE and VvpS is induced in the stationary phase by multiple transcription factors, including sigma factor S, SmcR, and the cAMP-cAMP receptor protein (cAMP-CRP) complex. Distinct roles of VvpM, such as induction of apoptosis, lead us to hypothesize VvpM expression is different from that of the other exoproteases. Its transcription, which was found to be independent of sigma S, is induced at the early exponential phase and then becomes negligible upon entry into the stationary phase. SmcR and CRP were studied regarding the control of vvpM expression. Transcription of vvpM was repressed by SmcR and cAMP-CRP complex individually, which specifically bound to the regions -2 to +20 and +6 to +27, respectively, relative to the vvpM transcription initiation site. Derepression of vvpM gene expression was 10- to 40-fold greater in an smcR crp double mutant than in single-gene mutants. Therefore, these results show that the expression of V. vulnificus exoproteases is differentially regulated, and in this way, distinct proteases can engage in specific interactions with a host.IMPORTANCE An opportunistic human pathogen, Vibrio vulnificus produces multiple extracellular proteases that are involved in diverse interactions with a host. The total exoproteolytic activity is detected mainly in the supernatants of the high-cell-density cultures. However, some proteolytic activity derived from a metalloprotease, VvpM, was present in the supernatants of the low-cell-density cultures sampled at the early growth period. In this study, we present the regulatory mechanism for VvpM expression via repression by at least two transcription factors. This type of transcriptional regulation is the exact opposite of those for expression of the other V. vulnificus exoproteases. Differential regulation of each exoprotease's production then facilitates the pathogen's participation in the distinct interactions with a host.


Bacterial Proteins/biosynthesis , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Quorum Sensing , Vibrio vulnificus/genetics , Apoptosis , Cyclic AMP Receptor Protein/metabolism , Enzyme Repression/genetics , Humans , Proteolysis , Transcription Factors/genetics , Vibrio vulnificus/enzymology
6.
Sci Rep ; 8(1): 1155, 2018 01 18.
Article En | MEDLINE | ID: mdl-29348452

The threat of antibiotic resistant bacteria has called for alternative antimicrobial strategies that would mitigate the increase of classical resistance mechanism. Many bacteria employ quorum sensing (QS) to govern the production of virulence factors and formation of drug-resistant biofilms. Targeting the mechanism of QS has proven to be a functional alternative to conventional antibiotic control of infections. However, the presence of multiple QS systems in individual bacterial species poses a challenge to this approach. Quorum sensing inhibitors (QSI) and quorum quenching enzymes (QQE) have been both investigated for their QS interfering capabilities. Here, we first simulated the combination effect of QQE and QSI in blocking bacterial QS. The effect was next validated by experiments using AiiA as QQE and G1 as QSI on Pseudomonas aeruginosa LasR/I and RhlR/I QS circuits. Combination of QQE and QSI almost completely blocked the P. aeruginosa las and rhl QS systems. Our findings provide a potential chemical biology application strategy for bacterial QS disruption.


Anti-Bacterial Agents/pharmacology , Bacterial Proteins/pharmacology , Biofilms/drug effects , Gene Expression Regulation, Bacterial/drug effects , Metalloendopeptidases/pharmacology , Pseudomonas aeruginosa/drug effects , Quorum Sensing/drug effects , Bacterial Proteins/antagonists & inhibitors , Bacterial Proteins/biosynthesis , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biofilms/growth & development , Drug Combinations , Drug Synergism , Ligases/antagonists & inhibitors , Ligases/genetics , Ligases/metabolism , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Microbial Sensitivity Tests , Pseudomonas aeruginosa/genetics , Pseudomonas aeruginosa/metabolism , Pyrimidinones/pharmacology , Quorum Sensing/genetics , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Recombinant Proteins/pharmacology , Trans-Activators/antagonists & inhibitors , Trans-Activators/genetics , Trans-Activators/metabolism , Transcription Factors/antagonists & inhibitors , Transcription Factors/genetics , Transcription Factors/metabolism , Triazoles/pharmacology
7.
PLoS One ; 12(8): e0182909, 2017.
Article En | MEDLINE | ID: mdl-28800585

Clostridium tetani and Clostridium botulinum produce two of the most potent neurotoxins known, tetanus neurotoxin and botulinum neurotoxin, respectively. Extensive biochemical and genetic investigation has been devoted to identifying and characterizing various C. botulinum strains. Less effort has been focused on studying C. tetani likely because recently sequenced strains of C. tetani show much less genetic diversity than C. botulinum strains and because widespread vaccination efforts have reduced the public health threat from tetanus. Our aim was to acquire genomic data on the U.S. vaccine strain of C. tetani to better understand its genetic relationship to previously published genomic data from European vaccine strains. We performed high throughput genomic sequence analysis on two wild-type and two vaccine C. tetani strains. Comparative genomic analysis was performed using these and previously published genomic data for seven other C. tetani strains. Our analysis focused on single nucleotide polymorphisms (SNP) and four distinct constituents of the mobile genome (mobilome): a hypervariable flagellar glycosylation island region, five conserved bacteriophage insertion regions, variations in three CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) systems, and a single plasmid. Intact type IA and IB CRISPR/Cas systems were within 10 of 11 strains. A type IIIA CRISPR/Cas system was present in two strains. Phage infection histories derived from CRISPR-Cas sequences indicate C. tetani encounters phages common among commensal gut bacteria and soil-borne organisms consistent with C. tetani distribution in nature. All vaccine strains form a clade distinct from currently sequenced wild type strains when considering variations in these mobile elements. SNP, flagellar glycosylation island, prophage content and CRISPR/Cas phylogenic histories provide tentative evidence suggesting vaccine and wild type strains share a common ancestor.


Bacterial Proteins/genetics , CRISPR-Cas Systems , Clostridium tetani/genetics , Genome, Bacterial , Phylogeny , Polymorphism, Single Nucleotide , Bacteriophages/genetics , Base Sequence , Chromosome Mapping , Clostridium tetani/classification , Clostridium tetani/pathogenicity , Genomic Islands , Glycosylation , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Plasmids/chemistry , Plasmids/metabolism , Sequence Analysis, DNA , Tetanus Toxin/biosynthesis , Tetanus Toxin/genetics , Tetanus Toxoid/genetics
8.
Biochim Biophys Acta Mol Cell Res ; 1864(11 Pt B): 2096-2104, 2017 Nov.
Article En | MEDLINE | ID: mdl-28502593

The zinc-endopeptidases meprin α and meprin ß are extracellular proteases involved in connective tissue homeostasis, intestinal barrier function and immunological processes. Meprins are unique among other extracellular proteases with regard to cleavage specificity and structure. Meprin α and meprin ß have a strong preference for negatively charged amino acids around the scissile bond, reflected by cleavage sites identified in procollagen I, the amyloid precursor protein (APP) and the interleukin-6 receptor (IL-6R). In this review we report on recent findings that summarize the complex molecular regulation of meprins, particular folding, activation and shedding. Dysregulation of meprin α and meprin ß is often associated with pathological conditions such as neurodegeneration, inflammatory bowel disease and fibrosis. Based on mouse models and patient data we suggest meprins as possible key regulators in the onset and progression of fibrotic disorders, leading to severe diseases such as pulmonary hypertension. This article is part of a Special Issue entitled: Proteolysis as a Regulatory Event in Pathophysiology edited by Stefan Rose-John.


Inflammation/genetics , Metalloendopeptidases/genetics , Proteolysis , Amino Acid Sequence/genetics , Animals , Gene Expression Regulation/genetics , Humans , Inflammation/pathology , Metalloendopeptidases/biosynthesis , Mice , Peptide Hydrolases/biosynthesis , Peptide Hydrolases/genetics
9.
Microbiology (Reading) ; 163(2): 280-288, 2017 02.
Article En | MEDLINE | ID: mdl-28270264

The EepR transcription factor positively regulates secondary metabolites and tissue-damaging metalloproteases. To gain insight into mechanisms by which EepR regulates pigment and co-regulated factors, genetic suppressor analysis was performed. Suppressor mutations that restored pigment to the non-pigmented ∆eepR mutant mapped to the hexS ORF. Mutation of hexS also restored haemolysis, swarming motility and protease production to the eepR mutant. HexS is a known direct and negative regulator of secondary metabolites in Serratia marcescens and is a LysR family regulator and an orthologue of LrhA. Here, we demonstrate that HexS directly controls eepR and the serralysin gene prtS. EepR was shown to directly regulate eepR expression but indirectly regulate hexS expression. Together, these data indicate that EepR and HexS oppose each other in controlling stationary phase-associated molecules and enzymes.


Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial/genetics , Genes, Regulator/genetics , Metalloendopeptidases/biosynthesis , Secondary Metabolism/genetics , Serratia marcescens/genetics , Serratia marcescens/metabolism , Transcription Factors/genetics , Bacterial Proteins/metabolism , DNA Transposable Elements/genetics , Depsipeptides/biosynthesis , Electrophoretic Mobility Shift Assay , Escherichia coli/genetics , Escherichia coli/metabolism , Flagella/metabolism , Mass Spectrometry , Prodigiosin/biosynthesis , Serratia marcescens/growth & development , Transcription Factors/metabolism
10.
Microbiol Immunol ; 61(1): 1-11, 2017 Jan.
Article En | MEDLINE | ID: mdl-28111826

Vibrio vulnificus, a gram-negative halophilic estuarine bacterium, is an opportunistic human pathogen that causes rapidly progressive fatal septicemia and necrotizing wound infection. This species also causes hemorrhagic septicemia called vibriosis in cultured eels. It has been proposed that a range of virulence factors play roles in pathogenesis during human and/or eel infection. Among these factors, a metalloprotease (V. vulnificus protease [VVP]) and a cytolytic toxin (V. vulnificus hemolysin [VVH]) are of significant importance. VVP elicits the characteristic edematous and hemorrhagic skin damage, whereas VVH exhibits powerful hemolytic and cytolytic activities and contributes to bacterial invasion from the intestine to the blood stream. In addition, a few V. vulnificus strains isolated from diseased eels have recently been found to produce a serine protease designated as V. vulnificus serine protease (VvsA) instead of VVP. Similarly to VVP, VvsA may possess various toxic activities such as collagenolytic, cytotoxic and edema-forming activity. In this review, regulation of V. vulnificus VVP, VVH and VvsA is clarified in terms of expression at the mRNA and protein levels. The explanation is given on the basis of the quorum sensing system, which is dependent on bacterial cell density. In addition, the roles of environmental factors and global regulators, such as histone-like nucleoid structuring protein, cyclic adeno monophosphate receptor protein, RpoS, HlyU, Fur, ToxRS, AphB and LeuO, in this regulation are outlined. The cumulative impact of these regulatory systems on the pathogenicity of V. vulnificus is here delineated.


Hemolysin Proteins/biosynthesis , Metalloproteases/biosynthesis , Vibrio vulnificus/metabolism , Animals , Bacterial Proteins/biosynthesis , Bacterial Proteins/genetics , Hemolysin Proteins/genetics , Humans , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Metalloproteases/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism , Vibrio vulnificus/enzymology , Vibrio vulnificus/genetics , Virulence Factors/genetics
11.
Clin Transl Oncol ; 19(5): 546-552, 2017 May.
Article En | MEDLINE | ID: mdl-27743168

PURPOSE: To investigate the role of miR-585 in the development and progression of non-small-cell lung cancer (NSCLC). METHODS: The expression levels of miR-585 in NSCLC cell lines and clinical samples were measured by quantitative PCR. NSCLC cells, A549 and H1299, were stably transfected with lentiviral vectors of miR-585 mimics or negative control. The effects of miR-585 on cell proliferation were detected both in vitro and in vivo. Cell migration and invasion were evaluated using wound healing assay and Transwell assay. Furthermore, luciferase reporter assay was used to identify the direct regulation of hSMG-1 by miR-585. RESULTS: Our results showed that miR-585 was downregulated in NSCLC cell lines and tumor tissues. Ectopic expression of miR-585 inhibited the ability of cell proliferation, migration, and invasion in vitro. In addition, miR-585 also decreased the growth rate of xenografted tumor in nude mice. Mechanically, miR-585 directly targeted the 3'-untranslated region (UTR) of hSMG-1 gene, which likely resulted in a dysfunction of mRNA surveillance and nonsense-mediated mRNA decay. CONCLUSION: Taken together, miR-585 probably has an inhibitory effect on tumor growth and is a prognostic biomarker of NSCLC.


Carcinoma, Non-Small-Cell Lung/pathology , Gene Expression Regulation, Neoplastic/genetics , Lung Neoplasms/pathology , Metalloendopeptidases/biosynthesis , MicroRNAs/genetics , Animals , Blotting, Western , Carcinoma, Non-Small-Cell Lung/genetics , Cell Movement/genetics , Cell Proliferation/genetics , Genes, Tumor Suppressor , Heterografts , Humans , Lung Neoplasms/genetics , Mice , Mice, Inbred BALB C , Mice, Nude , Polymerase Chain Reaction
12.
PLoS Genet ; 12(12): e1006463, 2016 Dec.
Article En | MEDLINE | ID: mdl-27911893

The m-AAA protease preserves proteostasis of the inner mitochondrial membrane. It ensures a functional respiratory chain, by controlling the turnover of respiratory complex subunits and allowing mitochondrial translation, but other functions in mitochondria are conceivable. Mutations in genes encoding subunits of the m-AAA protease have been linked to various neurodegenerative diseases in humans, such as hereditary spastic paraplegia and spinocerebellar ataxia. While essential functions of the m-AAA protease for neuronal survival have been established, its role in adult glial cells remains enigmatic. Here, we show that deletion of the highly expressed subunit AFG3L2 in mature mouse oligodendrocytes provokes early-on mitochondrial fragmentation and swelling, as previously shown in neurons, but causes only late-onset motor defects and myelin abnormalities. In contrast, total ablation of the m-AAA protease, by deleting both Afg3l2 and its paralogue Afg3l1, triggers progressive motor dysfunction and demyelination, owing to rapid oligodendrocyte cell death. Surprisingly, the mice showed premature hair greying, caused by progressive loss of melanoblasts that share a common developmental origin with Schwann cells and are targeted in our experiments. Thus, while both neurons and glial cells are dependant on the m-AAA protease for survival in vivo, complete ablation of the complex is necessary to trigger death of oligodendrocytes, hinting to cell-autonomous thresholds of vulnerability to m-AAA protease deficiency.


ATP-Dependent Proteases/genetics , Demyelinating Diseases/genetics , Hair/metabolism , Metalloendopeptidases/genetics , Mitochondria/genetics , ATP-Dependent Proteases/biosynthesis , ATPases Associated with Diverse Cellular Activities , Animals , Cell Death/genetics , Cell Survival/genetics , Hair/growth & development , Humans , Metalloendopeptidases/biosynthesis , Mice , Mitochondria/metabolism , Mitochondria/pathology , Mutation , Myelin Sheath/metabolism , Neuroglia/metabolism , Neurons/metabolism , Oligodendroglia/metabolism , Schwann Cells/metabolism
13.
Biochemistry (Mosc) ; 81(8): 884-91, 2016 Aug.
Article En | MEDLINE | ID: mdl-27677556

Features of gene expression of the secreted Bacillus pumilus metalloendopeptidase belonging to the adamalysin/reprolysin family were investigated. In the regulatory region of the gene, we identified hypothetical binding sites for transcription factors CcpA and TnrA. We found that the expression of the metalloendopeptidase gene is controlled by mechanisms of carbon and nitrogen catabolite repression. In experiments involving nitrogen metabolism regulatory protein mutant strains, we found that the control of the metalloendopeptidase gene expression involves proteins of ammonium transport GlnK and AmtB interacting with the TnrA-regulator.


Bacillus pumilus/enzymology , Bacterial Proteins/biosynthesis , Gene Expression Regulation, Bacterial/physiology , Gene Expression Regulation, Enzymologic/physiology , Metalloendopeptidases/biosynthesis , Bacillus pumilus/genetics , Bacterial Proteins/genetics , Metalloendopeptidases/genetics , Nitrogen/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism
14.
J Biotechnol ; 234: 105-115, 2016 Sep 20.
Article En | MEDLINE | ID: mdl-27496565

The goal of this study was to produce milligram quantities of pure, catalytically active, endotoxin-free recombinant neurolysin (rNln) in standard laboratory conditions for use as a research tool. To this end, we transformed E. coli cells with a plasmid construct for polyhistidine-tagged rNln, selected a high-expressing clone and determined the optimal time-point for translation of rNln. rNln was purified to homogeneity from the soluble pool of the cell lysate using Ni-NTA affinity and size-exclusion chromatography, followed by removal of endotoxins. Using this protocol ∼3mg pure, catalytically active and nearly endotoxin-free (≈0.003EU/µg protein) rNln was reproducibly obtained from 1l of culture. Lack of cytotoxicity of rNln preparation was documented in cultured mouse cells, whereas stability in whole mouse blood. Intraperitonealy administered rNln in mice reached the systemic circulation in intact and enzymatically active form with Tmax of 1h and T1/2 of ∼30min. Administration of rNln (2 and 10mg/kg) did not alter arterial blood pressure, heart rate, body temperature and blood glucose levels in mice. These studies demonstrate that the rNln preparation is suitable for cell culture and in vivo studies and can serve as a research tool to investigate the (patho)physiological function of this peptidase.


Metalloendopeptidases/biosynthesis , Metalloendopeptidases/metabolism , Recombinant Proteins/biosynthesis , Recombinant Proteins/metabolism , Animals , Astrocytes , Brain , Chromatography, Affinity , Chromatography, Gel , Endotoxins/chemistry , Escherichia coli/genetics , Female , Histidine/chemistry , Metalloendopeptidases/administration & dosage , Metalloendopeptidases/isolation & purification , Mice , Neurons , Protein Stability , Rats , Recombinant Proteins/administration & dosage , Recombinant Proteins/isolation & purification , Tandem Mass Spectrometry
15.
Protein Expr Purif ; 128: 52-9, 2016 12.
Article En | MEDLINE | ID: mdl-27539551

Neutral proteases are widely used in the textile, food and medical industries. This study was designed to obtain high expression levels of neutral protease I from Aspergillus oryzae 3.042 by using Pichia pastoris GS115 as the host strain for industrial purposes. The coding sequence of the target gene was modified, synthesized, and then cloned into the expression vector pHBM905BDM, which harbored the d1+2 × 201 AOX1 promoter and the MF4I leader sequence. The recombinant plasmid was transformed into Pichia pastoris GS115. The recombinant strain was used for high-density fermentation in a 4-L fermenter. The yield of the target protein reached 12.87 mg/mL, and the enzyme activity was approximately 49370 U/mL, which indicated that this enzyme was expressed in Pichia pastoris at a high level. The target protein was purified and characterized. Its optimum temperature and pH were 55 °C and 8.0, respectively. This enzyme was extremely sensitive to EDTA, which is consistent with the previous reports that it is a zinc-dependent metalloprotease. Our results indicated that low concentrations of zinc, calcium and magnesium ions stimulated the enzyme activity, whereas high concentrations inhibited its activity. In addition, calcium and magnesium ions increased the thermostability of the enzyme. All of the evidence indicated that this protease is a thermolysin-like peptidase.


Aspergillus oryzae/genetics , Fungal Proteins , Gene Expression , Metalloendopeptidases , Pichia/metabolism , Aspergillus oryzae/enzymology , Fungal Proteins/biosynthesis , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/chemistry , Metalloendopeptidases/genetics , Metalloendopeptidases/isolation & purification , Pichia/genetics , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification
16.
World J Microbiol Biotechnol ; 32(7): 113, 2016 Jul.
Article En | MEDLINE | ID: mdl-27263008

Here, we present the application of microbiology and biotechnology for the production of recombinant pharmaceutical proteins in plant cells. To the best of our knowledge and belief it is one of few examples of the expression of the prokaryotic staphylokinase (SAK) in the eukaryotic system. Despite the tremendous progress made in the plant biotechnology, most of the heterologous proteins still accumulate to low concentrations in plant tissues. Therefore, the composition of expression cassettes to assure economically feasible level of protein production in plants remains crucial. The aim of our research was obtaining a high concentration of the bacterial anticoagulant factor-staphylokinase, in Arabidopsis thaliana seeds. The coding sequence of staphylokinase was placed under control of the ß-phaseolin promoter and cloned between the signal sequence of the seed storage protein 2S2 and the carboxy-terminal KDEL signal sequence. The engineered binary vector pATAG-sak was introduced into Arabidopsis thaliana plants via Agrobacterium tumefaciens-mediated transformation. Analysis of the subsequent generations of Arabidopsis seeds revealed both presence of the sak and nptII transgenes, and the SAK protein. Moreover, a plasminogen activator activity of staphylokinase was observed in the protein extracts from seeds, while such a reaction was not observed in the leaf extracts showing seed-specific activity of the ß-phaseolin promoter.


Arabidopsis/genetics , Arabidopsis/metabolism , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Molecular Farming/methods , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Agrobacterium tumefaciens/genetics , Biotechnology/methods , Coenzymes , DNA, Bacterial/genetics , Escherichia coli/genetics , Gene Expression Profiling , Genetic Vectors , Metalloendopeptidases/chemistry , Plants, Genetically Modified , Promoter Regions, Genetic , Recombinant Fusion Proteins/chemistry , Seeds/genetics , Seeds/metabolism , Transgenes
17.
Anaerobe ; 40: 50-3, 2016 Aug.
Article En | MEDLINE | ID: mdl-27166180

Bacteroides fragilis is a commensal bacterium found in the gut of most humans, however enterotoxigenic B. fragilis strains (ETBF) have been associated with diarrhoea and colorectal cancer (CRC). The purpose of this study was to establish a method of screening for the Bacteroides fragilis toxin (bft) gene in stool samples, as a means of determining if carriage of ETBF is detected more often in CRC patients than in age-matched healthy controls. Stool samples from 71 patients recently diagnosed with CRC, and 71 age-matched controls, were screened by standard and quantitative PCR using primers specific for the detection of the bft gene. Bacterial template DNA from stool samples was prepared by two methods: a sweep, where all colonies growing on Bacteroides Bile Esculin agar following stool culture for 48 h at 37 °C in an anaerobic environment were swept into sterile water and heat treated; and a direct DNA extraction from each stool sample. The bft gene was detected more frequently from DNA isolated from bacterial sweeps than from matched direct DNA extractions. qPCR was found to be more sensitive than standard PCR in detecting bft. The cumulative total of positive qPCR assays from both sample types revealed that 19 of the CRC patients had evidence of the toxin gene in their stool sample (27%), compared to seven of the age-matched controls (10%). This difference was significant (P = 0.016). Overall, ETBF carriage was detected more often in CRC patient stool samples compared to controls, but disparate findings from the different DNA preparations and testing methods suggests that poor sensitivity may limit molecular detection of ETBF in stool samples.


Bacterial Toxins/analysis , Bacteroides Infections/diagnosis , Bacteroides fragilis/pathogenicity , Colorectal Neoplasms/diagnosis , Feces/chemistry , Genes, Bacterial , Metalloendopeptidases/analysis , Aged , Aged, 80 and over , Bacterial Toxins/biosynthesis , Bacteroides Infections/metabolism , Bacteroides Infections/microbiology , Bacteroides Infections/pathology , Bacteroides fragilis/genetics , Bacteroides fragilis/isolation & purification , Case-Control Studies , Colorectal Neoplasms/metabolism , Colorectal Neoplasms/microbiology , Colorectal Neoplasms/pathology , DNA Primers/chemistry , DNA Primers/metabolism , DNA, Bacterial/genetics , DNA, Bacterial/metabolism , Early Detection of Cancer , Feces/microbiology , Female , Gene Expression , Humans , Male , Metalloendopeptidases/biosynthesis , Middle Aged , Real-Time Polymerase Chain Reaction/standards , Sensitivity and Specificity , Virulence
18.
PLoS Pathog ; 12(5): e1005658, 2016 05.
Article En | MEDLINE | ID: mdl-27191844

Cysteine peptidases play a central role in the biology of Leishmania. In this work, we sought to further elucidate the mechanism(s) by which the cysteine peptidase CPB contributes to L. mexicana virulence and whether CPB participates in the formation of large communal parasitophorous vacuoles induced by these parasites. We initially examined the impact of L. mexicana infection on the trafficking of VAMP3 and VAMP8, two endocytic SNARE proteins associated with phagolysosome biogenesis and function. Using a CPB-deficient mutant, we found that both VAMP3 and VAMP8 were down-modulated in a CPB-dependent manner. We also discovered that expression of the virulence-associated GPI-anchored metalloprotease GP63 was inhibited in the absence of CPB. Expression of GP63 in the CPB-deficient mutant was sufficient to down-modulate VAMP3 and VAMP8. Similarly, episomal expression of GP63 enabled the CPB-deficient mutant to establish infection in macrophages, induce the formation of large communal parasitophorous vacuoles, and cause lesions in mice. These findings implicate CPB in the regulation of GP63 expression and provide evidence that both GP63 and CPB are key virulence factors in L. mexicana.


Gene Expression Regulation/physiology , Leishmania mexicana/pathogenicity , Leishmaniasis, Cutaneous/metabolism , Metalloendopeptidases/biosynthesis , Protozoan Proteins/metabolism , Animals , Blotting, Western , Cysteine/metabolism , Disease Models, Animal , Flow Cytometry , Mice , Mice, Inbred BALB C , Microscopy, Confocal , Peptide Hydrolases/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Virulence , Virulence Factors/metabolism
19.
J Oral Pathol Med ; 45(10): 730-739, 2016 Nov.
Article En | MEDLINE | ID: mdl-26850833

BACKGROUND: THBS1 (thrombospondin-1) is the extracellular matrix (ECM) protein that affects diverse cellular activities. It constitutes the tumor stroma, but the role of THBS1 in oral squamous cell carcinoma (OSCC) development is unclear. The aim of this study was to clarify the relevance of THBS1 in the pathogenesis of OSCC. MATERIALS AND METHODS: The expression of THBS1 was examined in 44 OSCC by immunohistochemical analysis and in 43 OSCC by cDNA microarray analysis. Cell culture experiments were conducted using human OSCC cell lines HSC3 and HO1N1 and mouse fibroblast ST2 cells to examine the effect of TGFB1 on THBS1 expression, and the effect of THBS1 on cellular behaviors. RESULTS: THBS1 was specifically induced in the tumor microenvironment of OSCC. THBS1 appeared to be produced mainly by the stromal cells, but also by OSCC cells. TGFB1 stimulated THBS1 expression in ST2, primary fibroblasts, and the OSCC cells. THBS1 promoted migration and invasion of HSC3 and HO1N1 in transwell migration assays. THBS1 stimulated the expression of MMP3 (matrix metalloprotease 3), MMP9, MMP11, and MMP13 in ST2 cells and MMP3, MMP11, and MMP13 in HO1N1 cells. The RGD peptide suppressed the THBS1-stimulated migration and upregulation of MMP11 and MMP13. CONCLUSIONS: THBS1 is a tumor-specific ECM protein that is induced by TGFB1 and promotes migration of cancer cells and stimulates the expression of MMPs partly through the integrin signaling, thereby favoring OSCC invasion.


Carcinoma, Squamous Cell/metabolism , Carcinoma, Squamous Cell/pathology , Head and Neck Neoplasms/metabolism , Head and Neck Neoplasms/pathology , Mouth Neoplasms/metabolism , Mouth Neoplasms/pathology , Thrombospondin 1/biosynthesis , Transforming Growth Factor beta1/pharmacology , Animals , Carcinoma, Squamous Cell/enzymology , Cell Line, Tumor , Cell Movement/drug effects , Cell Proliferation/drug effects , DNA, Complementary/metabolism , Head and Neck Neoplasms/enzymology , Humans , Immunohistochemistry , Metalloendopeptidases/biosynthesis , Mice , Mouth Neoplasms/enzymology , Squamous Cell Carcinoma of Head and Neck , Stromal Cells/enzymology , Stromal Cells/metabolism , Stromal Cells/pathology , Up-Regulation
20.
Atherosclerosis ; 245: 200-11, 2016 Feb.
Article En | MEDLINE | ID: mdl-26724531

BACKGROUND: Some LMNA mutations responsible for lipodystrophies, and some HIV-protease inhibitors (PIs) induce accumulation of farnesylated prelamin A and premature senescence in some cell types. Patients with LMNA mutations or under PI-based therapy suffer from early atherosclerosis. The metalloprotease ZMPSTE24 is the key enzyme in prelamin A maturation. AIM: We studied whether altered expression of ZMPSTE24 could contribute to vascular cell dysfunction in response to LMNA mutations or PI treatments. METHODS: Protein expression of prelamin A and ZMPSTE24 were evaluated in patients' cells and in human cultured VSMCs. Oxidative stress, inflammation, senescence and transdifferentiation/calcification were evaluated in VSMCs. RESULTS: Fibroblasts from LMNA-mutated lipodystrophic patients (mutations R482W, D47Y or R133L) and peripheral blood mononuclear cells from PI-treated-HIV-infected patients expressed increased prelamin A and decreased ZMPSTE24, which was also observed in VSMCs overexpressing mutant LMNA or treated with PIs. These alterations correlated with oxidative stress, inflammation, senescence and calcification (all p < 0.05). ZMPSTE24 silencing in native VSMCs recapitulated the mutant LMNA- and PI-induced accumulation of farnesylated prelamin A, oxidative stress, inflammation, senescence and calcification. A negative regulator of ZMPSTE24, miRNA-141-3p, was enhanced in LMNA-mutated or PI-treated VSMCs. The farnesylation inhibitors pravastatin and FTI-277, or the antioxidant N-acetyl cysteine, partly restored ZMPSTE24 expression, and concomitantly decreased oxidative stress, inflammation, senescence, and calcification of PI-treated VSCMs. CONCLUSIONS: ZMPSTE24 downregulation is a major contributor in VSMC dysfunctions resulting from LMNA mutations or PI treatments that could translate in early atherosclerosis at the clinical level. These novel pathophysiological mechanisms could open new therapeutic perspectives for cardiovascular aging.


Down-Regulation , HIV Protease Inhibitors/pharmacology , Lamin Type A/genetics , Lipodystrophy/genetics , Membrane Proteins/genetics , Metalloendopeptidases/genetics , Mutation , Vascular Calcification/genetics , Cells, Cultured , Cellular Senescence/drug effects , DNA/genetics , DNA Mutational Analysis , Humans , Lamin Type A/metabolism , Lipodystrophy/drug therapy , Lipodystrophy/metabolism , Membrane Proteins/biosynthesis , Metalloendopeptidases/biosynthesis , Reverse Transcriptase Polymerase Chain Reaction , Vascular Calcification/drug therapy , Vascular Calcification/metabolism
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