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1.
Commun Biol ; 7(1): 735, 2024 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-38890525

RESUMEN

Utilizing a microfluidic chip with serpentine channels, we inoculated the chip with an agar plug with Neurospora crassa mycelium and successfully captured individual hyphae in channels. For the first time, we report the presence of an autonomous clock in hyphae. Fluorescence of a mCherry reporter gene driven by a clock-controlled gene-2 promoter (ccg-2p) was measured simultaneously along hyphae every half an hour for at least 6 days. We entrained single hyphae to light over a wide range of day lengths, including 6,12, 24, and 36 h days. Hyphae tracked in individual serpentine channels were highly synchronized (K = 0.60-0.78). Furthermore, hyphae also displayed temperature compensation properties, where the oscillation period was stable over a physiological range of temperatures from 24 °C to 30 °C (Q10 = 1.00-1.10). A Clock Tube Model developed could mimic hyphal growth observed in the serpentine chip and provides a mechanism for the stable banding patterns seen in race tubes at the macroscopic scale and synchronization through molecules riding the growth wave in the device.


Asunto(s)
Hifa , Neurospora crassa , Neurospora crassa/genética , Neurospora crassa/fisiología , Neurospora crassa/crecimiento & desarrollo , Hifa/crecimiento & desarrollo , Hifa/genética , Temperatura , Dispositivos Laboratorio en un Chip , Regulación Fúngica de la Expresión Génica , Relojes Biológicos/genética
2.
Microbiol Spectr ; 9(2): e0033521, 2021 10 31.
Artículo en Inglés | MEDLINE | ID: mdl-34612669

RESUMEN

Sexual reproduction is a key process influencing the evolution and adaptation of animals, plants, and many eukaryotic microorganisms, such as fungi. However, the sequential cell biology of fertilization and the associated nuclear dynamics after plasmogamy are poorly understood in filamentous fungi. Using histone-fluorescent parental isolates, we tracked male and female nuclei during fertilization in the model ascomycete Neurospora crassa using live-cell imaging. This study unravels the behavior of trichogyne resident female nuclei and the extraordinary manner in which male nuclei migrate up the trichogyne to the protoperithecium. Our observations raise new fundamental questions about the modus operandi of nucleus movements during sexual reproduction, male and female nuclear identity, guidance of nuclei within the trichogyne and, unexpectedly, the avoidance of "polyspermy" in fungi. The spatiotemporal dynamics of male nuclei within the trichogyne following plasmogamy are also described, where the speed and the deformation of male nuclei are of the most dramatic observed to date in a living organism. IMPORTANCE Using live-cell fluorescence imaging, for the first time we have observed live male and female nuclei during sexual reproduction in the model fungus Neurospora crassa. This study reveals the specific behavior of resident female nuclei within the trichogyne (the female organ) after fertilization and the extraordinary manner in which male nuclei migrate across the trichogyne toward their final destination, the protoperithecium, where karyogamy takes place. Importantly, the speed and deformation of male nuclei were found to be among the most dramatic ever observed in a living organism. Furthermore, we observed that entry of male nuclei into protoperithecia may block the entry of other male nuclei, suggesting that a process analogous to polyspermy avoidance could exist in fungi. Our live-cell imaging approach opens new opportunities for novel research on cell-signaling during sexual reproduction in fungi and, on a broader scale, nuclear dynamics in eukaryotes.


Asunto(s)
Núcleo Celular/fisiología , Fertilización/fisiología , Genes del Tipo Sexual de los Hongos/genética , Neurospora crassa/crecimiento & desarrollo , Reproducción/fisiología , Cuerpos Fructíferos de los Hongos/crecimiento & desarrollo , Movimiento/fisiología , Neurospora crassa/genética , Esporas Fúngicas/fisiología
3.
mBio ; 12(2)2021 03 16.
Artículo en Inglés | MEDLINE | ID: mdl-33727355

RESUMEN

Tip-growing fungal cells maintain cell polarity at the apical regions and elongate by de novo synthesis of the cell wall. Cell polarity and tip growth rate affect mycelial morphology. However, it remains unclear how both features act cooperatively to determine cell shape. Here, we investigated this relationship by analyzing hyphal tip growth of filamentous fungi growing inside extremely narrow 1 µm-width channels of microfluidic devices. Since the channels are much narrower than the diameter of hyphae, any hypha growing through the channel must adapt its morphology. Live-cell imaging analyses revealed that hyphae of some species continued growing through the channels, whereas hyphae of other species often ceased growing when passing through the channels, or had lost apical polarity after emerging from the other end of the channel. Fluorescence live-cell imaging analyses of the Spitzenkörper, a collection of secretory vesicles and polarity-related proteins at the hyphal tip, in Neurospora crassa indicates that hyphal tip growth requires a very delicate balance of ordered exocytosis to maintain polarity in spatially confined environments. We analyzed the mycelial growth of seven fungal species from different lineages, including phytopathogenic fungi. This comparative approach revealed that the growth defects induced by the channels were not correlated with their taxonomic classification or with the width of hyphae, but, rather, correlated with the hyphal elongation rate. This report indicates a trade-off between morphological plasticity and velocity in mycelial growth and serves to help understand fungal invasive growth into substrates or plant/animal cells, with direct impact on fungal biotechnology, ecology, and pathogenicity.IMPORTANCE Cell morphology, which is controlled by polarity and growth, is fundamental for all cellular functions. However how polarity and growth act cooperatively to control cell shape remains unclear. Here we investigated their relationship by analyzing hyphal tip growth of filamentous fungi growing inside extremely narrow 1 µm-width channels of microfluidic devices. We found that most fast growing hyphae often lost the cell polarity after emerging from the channels, whereas slow growing hyphae retained polarity and continued growing, indicating a trade-off between plasticity and velocity in mycelial growth. These results serve to understand fungal invasive growth into substrates or plant/animal cells, with direct impact on fungal biotechnology, ecology and pathogenicity.


Asunto(s)
Polaridad Celular , Hongos/crecimiento & desarrollo , Hifa/citología , Hifa/crecimiento & desarrollo , Aspergillus/crecimiento & desarrollo , Aspergillus/metabolismo , Citoplasma/metabolismo , Proteínas Fúngicas/metabolismo , Hongos/metabolismo , Microtúbulos , Neurospora crassa/crecimiento & desarrollo , Neurospora crassa/metabolismo , Vesículas Secretoras/metabolismo
4.
Fungal Genet Biol ; 144: 103465, 2020 11.
Artículo en Inglés | MEDLINE | ID: mdl-32949723

RESUMEN

Wild-type filamentous fungus Neurospora crassa continues to grow its hyphae for a very lengthy period of time (>2 years), whereas mutations at the natural death (nd) locus shorten life span (approximately 20 days). By positional cloning based on heat augmented mutagen sensitivity of the nd strain, we identified a nonsense mutation in the msh1 gene, an eukaryotic homolog of bacterial MutS, and this mutation resulted in encoding non-functional polypeptide. By tagging with GFP, subcellular localization of the MSH1 protein in the mitochondria was observed, and knock out of the msh1 gene caused severe growth deficiency accompanying mitochondrial DNA (mtDNA) aberrations such as large-scale mtDNA deletions and rearrangements as seen in the nd strain. These results suggested that MSH1 may maintain mtDNA integrity. Thus, loss of function compromises mtDNA, leading to the acceleration of cellular aging.


Asunto(s)
ADN Mitocondrial/genética , Hifa/genética , Longevidad/genética , Proteínas MutS/genética , Secuencia de Aminoácidos/genética , Codón sin Sentido/genética , Proteínas de Unión al ADN/genética , Hifa/crecimiento & desarrollo , Mitocondrias/genética , Mitocondrias/metabolismo , Neurospora crassa/genética , Neurospora crassa/crecimiento & desarrollo , Recombinación Genética/genética , Saccharomyces cerevisiae/genética
5.
Evolution ; 74(8): 1772-1787, 2020 08.
Artículo en Inglés | MEDLINE | ID: mdl-32432345

RESUMEN

Earth's temperature is increasing due to anthropogenic CO 2 emissions; and organisms need either to adapt to higher temperatures, migrate into colder areas, or face extinction. Temperature affects nearly all aspects of an organism's physiology via its influence on metabolic rate and protein structure, therefore genetic adaptation to increased temperature may be much harder to achieve compared to other abiotic stresses. There is still much to be learned about the evolutionary potential for adaptation to higher temperatures, therefore we studied the quantitative genetics of growth rates in different temperatures that make up the thermal performance curve of the fungal model system Neurospora crassa. We studied the amount of genetic variation for thermal performance curves and examined possible genetic constraints by estimating the G-matrix. We observed a substantial amount of genetic variation for growth in different temperatures, and most genetic variation was for performance curve elevation. Contrary to common theoretical assumptions, we did not find strong evidence for genetic trade-offs for growth between hotter and colder temperatures. We also simulated short-term evolution of thermal performance curves of N. crassa, and suggest that they can have versatile responses to selection.


Asunto(s)
Adaptación Biológica , Evolución Biológica , Modelos Genéticos , Neurospora crassa/genética , Sitios de Carácter Cuantitativo , Cambio Climático , Variación Genética , Neurospora crassa/crecimiento & desarrollo , Temperatura
6.
Proc Natl Acad Sci U S A ; 117(20): 10935-10945, 2020 05 19.
Artículo en Inglés | MEDLINE | ID: mdl-32355000

RESUMEN

The circadian clock in eukaryotes controls transcriptional and posttranscriptional events, including regulation of the levels and phosphorylation state of translation factors. However, the mechanisms underlying clock control of translation initiation, and the impact of this potential regulation on rhythmic protein synthesis, were not known. We show that inhibitory phosphorylation of eIF2α (P-eIF2α), a conserved translation initiation factor, is clock controlled in Neurospora crassa, peaking during the subjective day. Cycling P-eIF2α levels required rhythmic activation of the eIF2α kinase CPC-3 (the homolog of yeast and mammalian GCN2), and rhythmic activation of CPC-3 was abolished under conditions in which the levels of charged tRNAs were altered. Clock-controlled accumulation of P-eIF2α led to reduced translation during the day in vitro and was necessary for the rhythmic synthesis of select proteins in vivo. Finally, loss of rhythmic P-eIF2α levels led to reduced linear growth rates, supporting the idea that partitioning translation to specific times of day provides a growth advantage to the organism. Together, these results reveal a fundamental mechanism by which the clock regulates rhythmic protein production, and provide key insights into how rhythmic translation, cellular energy, stress, and nutrient metabolism are linked through the levels of charged versus uncharged tRNAs.


Asunto(s)
Relojes Circadianos/fisiología , Factor 2 Eucariótico de Iniciación/metabolismo , Procesamiento Proteico-Postraduccional/fisiología , Animales , Ritmo Circadiano , Factor 2 Eucariótico de Iniciación/genética , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Regulación Fúngica de la Expresión Génica , Neurospora crassa/crecimiento & desarrollo , Neurospora crassa/metabolismo , Fosforilación , Proteínas Quinasas/genética , Proteínas Quinasas/metabolismo , eIF-2 Quinasa/metabolismo
7.
Fungal Biol ; 124(5): 398-406, 2020 05.
Artículo en Inglés | MEDLINE | ID: mdl-32389302

RESUMEN

Work on the filamentous fungus Neurospora crassa has contributed to or pioneered many aspects of research on circadian clock mechanism, a process that is functionally conserved across eukaryotes. Biochemical assays of the fungal circadian clock typically involve growth in liquid medium where Neurospora forms a spherical ball of submerged mycelium. Here, we revive a method for dispersed growth of Neurospora in batch culture using polyacrylic acid as an additive to the medium. We demonstrate that dispersed growth cultures utilize more carbon than mycelial balls, but nonetheless retain a functional circadian clock. This culturing method is suited for use in circadian experiments where uniform exposure to nutrients and/or increased biomass is required.


Asunto(s)
Ritmo Circadiano , Glucosa , Neurospora crassa , Ritmo Circadiano/efectos de los fármacos , Técnicas de Cultivo , Glucosa/farmacología , Neurospora crassa/efectos de los fármacos , Neurospora crassa/crecimiento & desarrollo
8.
Mol Microbiol ; 113(6): 1101-1121, 2020 06.
Artículo en Inglés | MEDLINE | ID: mdl-32022309

RESUMEN

Although lipid signaling has been shown to serve crucial roles in mammals and plants, little is known about this process in filamentous fungi. Here we analyze the contribution of phospholipase D (PLD) and its product phosphatidic acid (PA) in hyphal morphogenesis and growth of Epichloë festucae and Neurospora crassa, and in the establishment of a symbiotic interaction between E. festucae and Lolium perenne. Growth of E. festucae and N. crassa PLD deletion strains in axenic culture, and for E. festucae in association with L. perenne, were analyzed by light-, confocal- and electron microscopy. Changes in PA distribution were analyzed in E. festucae using a PA biosensor and the impact of these changes on the endocytic recycling and superoxide production investigated. We found that E. festucae PldB, and the N. crassa ortholog, PLA-7, are required for polarized growth and cell fusion and contribute to ascospore development, whereas PldA/PLA-8 are dispensable for these functions. Exogenous addition of PA rescues the cell-fusion phenotype in E. festucae. PldB is also crucial for E. festucae to establish a symbiotic association with L. perenne. This study identifies a new component of the cell-cell communication and cell fusion signaling network for hyphal morphogenesis and growth of filamentous fungi.


Asunto(s)
Epichloe/crecimiento & desarrollo , Lolium/microbiología , Neurospora crassa/crecimiento & desarrollo , Ácidos Fosfatidicos/metabolismo , Fosfolipasa D/metabolismo , Técnicas Biosensibles , Comunicación Celular , Fusión Celular , Epichloe/fisiología , Eliminación de Gen , Regulación Fúngica de la Expresión Génica/genética , Hifa/crecimiento & desarrollo , Lolium/fisiología , Fosfatidilcolinas/metabolismo , Transducción de Señal/fisiología , Esporas Fúngicas/crecimiento & desarrollo , Superóxidos/metabolismo , Simbiosis/fisiología
9.
Curr Biol ; 29(18): 3006-3017.e3, 2019 09 23.
Artículo en Inglés | MEDLINE | ID: mdl-31474536

RESUMEN

Somatic cell fusion and conspecific cooperation are crucial social traits for microbial unicellular-to-multicellular transitions, colony expansion, and substrate foraging but are also associated with risks of parasitism. We identified a cell wall remodeling (cwr) checkpoint that acts upon cell contact to assess genetic compatibility and regulate cell wall dissolution during somatic cell fusion in a wild population of the filamentous fungus Neurospora crassa. Non-allelic interactions between two linked loci, cwr-1 and cwr-2, were necessary and sufficient to block cell fusion: cwr-1 encodes a polysaccharide monooxygenase (PMO), a class of enzymes associated with extracellular degradative capacities, and cwr-2 encodes a predicted transmembrane protein. Mutations of sites in CWR-1 essential for PMO catalytic activity abolished the block in cell fusion between formerly incompatible strains. In Neurospora, alleles cwr-1 and cwr-2 were highly polymorphic, fell into distinct haplogroups, and showed trans-species polymorphisms. Distinct haplogroups and trans-species polymorphisms at cwr-1 and cwr-2 were also identified in the distantly related genus Fusarium, suggesting convergent evolution. Proteins involved in chemotropic processes showed extended localization at contact sites, suggesting that cwr regulates the transition between chemotropic growth and cell wall dissolution. Our work revealed an allorecognition surveillance system based on kind discrimination that inhibits cooperative behavior in fungi by blocking cell fusion upon contact, contributing to fungal immunity by preventing formation of chimeras between genetically non-identical colonies.


Asunto(s)
Comunicación Celular/genética , Pared Celular/genética , Pared Celular/metabolismo , Alelos , Secuencia de Aminoácidos/genética , Comunicación Celular/fisiología , Fusión Celular , Evolución Molecular , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Genes Fúngicos/genética , Neurospora crassa/genética , Neurospora crassa/crecimiento & desarrollo , Filogenia , Polimorfismo Genético/genética
10.
Proc Natl Acad Sci U S A ; 116(27): 13543-13552, 2019 07 02.
Artículo en Inglés | MEDLINE | ID: mdl-31213536

RESUMEN

Filamentous fungi that colonize microenvironments, such as animal or plant tissue or soil, must find optimal paths through their habitat, but the biological basis for negotiating growth in constrained environments is unknown. We used time-lapse live-cell imaging of Neurospora crassa in microfluidic environments to show how constraining geometries determine the intracellular processes responsible for fungal growth. We found that, if a hypha made contact with obstacles at acute angles, the Spitzenkörper (an assembly of vesicles) moved from the center of the apical dome closer to the obstacle, thus functioning as an internal gyroscope, which preserved the information regarding the initial growth direction. Additionally, the off-axis trajectory of the Spitzenkörper was tracked by microtubules exhibiting "cutting corner" patterns. By contrast, if a hypha made contact with an obstacle at near-orthogonal incidence, the directional memory was lost, due to the temporary collapse of the Spitzenkörper-microtubule system, followed by the formation of two "daughter" hyphae growing in opposite directions along the contour of the obstacle. Finally, a hypha passing a lateral opening in constraining channels continued to grow unperturbed, but a daughter hypha gradually branched into the opening and formed its own Spitzenkörper-microtubule system. These observations suggest that the Spitzenkörper-microtubule system is responsible for efficient space partitioning in microenvironments, but, in its absence during constraint-induced apical splitting and lateral branching, the directional memory is lost, and growth is driven solely by the isotropic turgor pressure. These results further our understanding of fungal growth in microenvironments relevant to environmental, industrial, and medical applications.


Asunto(s)
Hifa/crecimiento & desarrollo , Neurospora crassa/crecimiento & desarrollo , Ambiente , Hifa/fisiología , Microtúbulos/fisiología , Neurospora crassa/fisiología , Imagen Óptica , Imagen de Lapso de Tiempo
11.
Appl Biochem Biotechnol ; 189(2): 608-625, 2019 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-31077028

RESUMEN

Soybean dregs fermented by Neurospora crassa is a typical traditional food in Gannan district of China. In this study, in vitro imitated gut fermentation was carried out to evaluate whether the oligosaccharides from this fermented soybean dregs had potential prebiotic properties. 11.91% of oligosaccharides were extracted from the fermented soybean dregs at the optimized condition which of 1:25 for ratio of soybean dregs (g) to 50% ethanol (ml), 90 min of extracted duration at 70 °C for twice. The soybean dreg oligosaccharides (SBOS) were progressively purified with Sevag method and on columns filled with AB-8 macroporous resin, and then identified as cellobiose by HPLC-ESI-MS and FT-IR. Oligosaccharides of soybean dregs with 800 mg/L significantly decreased pH value (p < 0.05) and ammonia N concentration (p < 0.05), and increased short chain fatty acid (SCFA) level (p < 0.05) in imitated gut fermentation compared with control group. It was shown that this fermented soybean dregs could be a potential prebiotic food.


Asunto(s)
Glycine max/química , Neurospora crassa/crecimiento & desarrollo , Oligosacáridos/química , Prebióticos
12.
Fungal Genet Biol ; 128: 49-59, 2019 07.
Artículo en Inglés | MEDLINE | ID: mdl-30959095

RESUMEN

In fungal hyphae multiple protein complexes assemble at sites of apical growth to maintain cell polarity. The polarisome, which in Saccharomyces cerevisiae consists of Spa2, Pea2, Bud6 and Bni1 is described as a small network of functionally related proteins that regulate polarized growth. In yeast Msb3 and Msb4 are considered polarisome components since both proteins interact directly with Spa2 and are involved in Bni1-nucleated actin assembly in vivo. Additionally they regulate exocytosis through their GAP activity towards Sec4 and perhaps other Rab GTPases. In filamentous fungi the role of these proteins has not been investigated, and in the genome of Neurospora crassa only the gene gyp-3 (NCU04514) was found to correlate with MSB3 and MSB4 of S. cerevisiae. Therefore in this work the role of GYP-3 and its relationship with the polarisome in N. crassa was analyzed. The results show that GYP-3 is required for normal colony development and cell morphology since the Δgyp-3 strain displayed a substantial reduction in colony diameter and hyphae showed a distorted morphology expressed as a general pattern of bulging areas in the distal region and hyphae were thinner at the active growing zone. The lack of GYP-3 had no effects on the localization of the polarisome components SPA-2 and BNI-1. Likewise, GYP-3 was not necessary for the normal localization of the F-actin population, however the dynamics of the Spitzenkörper (Spk) and the actin population at the apical region seemed to be destabilized. Additionally, the lack of GYP-3 strongly affects the localization and dynamics of SEC-4; which no longer accumulates at the tip of hyphae. The results presented here strongly suggest that GYP-3 is not part of the polarisome; however it requires the scaffold protein SPA-2 for arriving at the tip of hyphae. Although GYP-3 is not essential for cell survival, it has an important role in maintaining normal cell growth and morphology in N. crassa.


Asunto(s)
Polaridad Celular/genética , Proteínas Fúngicas/genética , Morfogénesis , Neurospora crassa/crecimiento & desarrollo , Neurospora crassa/genética , Actinas/metabolismo , Proteínas del Citoesqueleto , Hifa/genética , Hifa/crecimiento & desarrollo
13.
mBio ; 10(2)2019 03 26.
Artículo en Inglés | MEDLINE | ID: mdl-30914504

RESUMEN

Fungal spores germinate and undergo vegetative growth, leading to either asexual or sexual reproductive dispersal. Previous research has indicated that among developmental regulatory genes, expression is conserved across nutritional environments, whereas pathways for carbon and nitrogen metabolism appear highly responsive-perhaps to accommodate differential nutritive processing. To comprehensively investigate conidial germination and the adaptive life history decision-making underlying these two modes of reproduction, we profiled transcription of Neurospora crassa germinating on two media: synthetic Bird medium, designed to promote asexual reproduction; and a natural maple sap medium, on which both asexual reproduction and sexual reproduction manifest. A later start to germination but faster development was observed on synthetic medium. Metabolic genes exhibited altered expression in response to nutrients-at least 34% of the genes in the genome were significantly downregulated during the first two stages of conidial germination on synthetic medium. Knockouts of genes exhibiting differential expression across development altered germination and growth rates, as well as in one case causing abnormal germination. A consensus Bayesian network of these genes indicated especially tight integration of environmental sensing, asexual and sexual development, and nitrogen metabolism on a natural medium, suggesting that in natural environments, a more dynamic and tentative balance of asexual and sexual development may be typical of N. crassa colonies.IMPORTANCE One of the most remarkable successes of life is its ability to flourish in response to temporally and spatially varying environments. Fungi occupy diverse ecosystems, and their sensitivity to these environmental changes often drives major fungal life history decisions, including the major switch from vegetative growth to asexual or sexual reproduction. Spore germination comprises the first and simplest stage of vegetative growth. We examined the dependence of this early life history on the nutritional environment using genome-wide transcriptomics. We demonstrated that for developmental regulatory genes, expression was generally conserved across nutritional environments, whereas metabolic gene expression was highly labile. The level of activation of developmental genes did depend on current nutrient conditions, as did the modularity of metabolic and developmental response network interactions. This knowledge is critical to the development of future technologies that could manipulate fungal growth for medical, agricultural, or industrial purposes.


Asunto(s)
Carbono/metabolismo , Neurospora crassa/crecimiento & desarrollo , Neurospora crassa/metabolismo , Nitrógeno/metabolismo , Esporas Fúngicas/crecimiento & desarrollo , Esporas Fúngicas/metabolismo , Medios de Cultivo/química , Perfilación de la Expresión Génica , Regulación Fúngica de la Expresión Génica , Redes y Vías Metabólicas/genética , Neurospora crassa/genética
14.
Fungal Genet Biol ; 125: 13-27, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30615944

RESUMEN

In filamentous fungi, polarized growth is the result of vesicle secretion at the hyphal apex. Motor proteins mediate vesicle transport to target destinations on the plasma membrane via actin and microtubule cytoskeletons. Myosins are motor proteins associated with actin filaments. Specifically, class V myosins are responsible for cargo transport in eukaryotes. We studied the dynamics and localization of myosin V in wild type hyphae of Neurospora crassa and in hyphae that lacked MYO-5. In wild type hyphae, MYO-5-GFP was localized concentrated in the hyphal apex and colocalized with Spitzenkörper. Photobleaching studies showed that MYO-5-GFP was transported to the apex from subapical hyphal regions. The deletion of the class V myosin resulted in a reduced rate of hyphal growth, apical hyperbranching, and intermittent loss of hyphal polarity. MYO-5 did not participate in breaking the symmetrical growth during germination but contributed in the apical organization upon establishment of polarized growth. In the Δmyo-5 mutant, actin was organized into thick cables in the apical and subapical hyphal regions, and the number of endocytic patches was reduced. The microvesicles-chitosomes observed with CHS-1-GFP were distributed as a cloud occupying the apical dome and not in the Spitzenkörper as the WT strain. The mitochondrial movement was not associated with MYO-5, but tubular vacuole position is MYO-5-dependent. These results suggest that MYO-5 plays a role in maintaining apical organization and the integrity of the Spitzenkörper and is required for normal hyphal growth, polarity, septation, conidiation, and proper conidial germination.


Asunto(s)
Citoesqueleto de Actina/genética , Hifa/genética , Miosina Tipo V/genética , Neurospora crassa/genética , Membrana Celular/genética , Polaridad Celular/genética , Proteínas Fúngicas/genética , Regulación Fúngica de la Expresión Génica/genética , Proteínas Fluorescentes Verdes/genética , Hifa/crecimiento & desarrollo , Neurospora crassa/crecimiento & desarrollo
15.
Appl Biochem Biotechnol ; 187(1): 253-265, 2019 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-29923150

RESUMEN

Multi-strain mixed fermentation can provide a relatively complete lignocellulosic enzyme system compared with single-strain fermentation. This study was firstly to screen strains which have a strong ability to hydrolyse rice straw (RS) enzymatically and enrich true protein (TP). Then, the conditions in the process of SSF, including the optimum inoculum size of mixed strains, inoculation ratio, and different inoculation time of N. crassa 14-8, were optimized. The experimental results showed that the highest TP content could be obtained by using N. crassa 14-8, C. utilis, and P. chrysosporium as mixed strains, and 5 mM Mn2+ and 50 mM veratryl alcohol were used as inducers of lignin peroxidase (LiP) to improve the efficiency of enzymatic hydrolysis. When N. crassa 14-8 was inoculated 1 day later than P. chrysosporium, the total inoculum size was 10%, and the optimum ratio of N. crassa 14-8 to P. chrysosporium was 1:2, the maximum TP yield (8.89%) was obtained, with 123.37% of its increase rate. This work proposed a technique with potential application in large-scale feedstuff protein conversion.


Asunto(s)
Candida/crecimiento & desarrollo , Proteínas Fúngicas/biosíntesis , Neurospora crassa/crecimiento & desarrollo , Oryza/química , Penicillium chrysogenum/crecimiento & desarrollo
16.
ISME J ; 13(3): 780-788, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30413765

RESUMEN

Trade-offs among traits influencing fitness are predicted by life history theory because resources allocated to one function are unavailable to another. Here we examine the relationship between two such traits, asexual reproduction and growth rate, in the filamentous fungus Neurospora crassa, where shared genetic and physiological factors and a source-sink energetic relationship between growth and reproduction may constrain the evolution of these traits. To test growth-reproduction relationships in this species, we independently selected on mycelial growth rate or asexual spore production in a heterogeneous lab-derived population and evaluated the response of the non-selected traits. Combined with phenotypes for the 20 wild strains used to produce the heterogeneous population and the genome-wide genotypes of 468 strains, these data show that growth and reproduction are highly plastic in N. crassa and do not trade off either among wild strains or after laboratory selection in two environments. Rather, we find no predictable growth-reproduction relationship in the environments tested, indicating an effective absence of genetic constraint between these traits. Our results suggest that growth rate and asexual reproduction may not respond predictably to environmental change and suggest that reliance on a single trait as a proxy for fitness in fungal studies may be inadvisable.


Asunto(s)
Neurospora crassa/fisiología , Genotipo , Rasgos de la Historia de Vida , Neurospora crassa/genética , Neurospora crassa/crecimiento & desarrollo , Fenotipo , Reproducción Asexuada
17.
Methods Enzymol ; 611: 503-529, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30471697

RESUMEN

Circadian rhythms are 24-h oscillations conserved in nearly all living organisms that allow for the anticipation of daily environmental changes. These rhythms are maintained by a molecular clock comprised of a transcriptional/translational negative feedback loop. Many of the proteins that organize this feedback loop are intrinsically disordered proteins (IDPs), which lack a fixed or ordered three-dimensional structure. Little is known about the impact of intrinsic disorder in clock proteins and this lack of comprehension is compounded by the fact that sophisticated techniques to understand the inherent nature of IDPs are only now emerging. Here, we add to that conversation by describing our novel protocol to track the conformation of a core clock protein (FREQUENCY) in a vital clock model organism (Neurospora crassa). Our protocol, CiRcadian nAtive FasT parallel proteolYsis (CRAFTY), utilizes a parallel proteolysis approach in native conditions to determine the conformational shifts in FREQUENCY over time, providing biologically relevant information and contributing to our understanding of the importance of disorder in the circadian clock.


Asunto(s)
Péptidos y Proteínas de Señalización del Ritmo Circadiano/química , Proteínas Fúngicas/química , Proteínas Intrínsecamente Desordenadas/química , Neurospora crassa/química , Western Blotting/métodos , Relojes Circadianos , Ritmo Circadiano , Péptidos y Proteínas de Señalización del Ritmo Circadiano/aislamiento & purificación , Péptidos y Proteínas de Señalización del Ritmo Circadiano/metabolismo , Proteínas Fúngicas/aislamiento & purificación , Proteínas Fúngicas/metabolismo , Proteínas Intrínsecamente Desordenadas/aislamiento & purificación , Proteínas Intrínsecamente Desordenadas/metabolismo , Neurospora crassa/crecimiento & desarrollo , Neurospora crassa/metabolismo , Conformación Proteica , Proteolisis
18.
Appl Microbiol Biotechnol ; 102(22): 9577-9584, 2018 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-30225531

RESUMEN

Neurospora crassa is a filamentous fungus potent in secreting cellulase and degrading lignocellulosic materials. Here, heterologous cis-aconitic acid decarboxylase was expressed in N. crassa to synthesize itaconic acid which is a high potential platform chemical with applications as an alternative for petroleum-based products. The present study demonstrated that itaconic acid can be produced directly from cellulose and other lignocellulosic materials by the engineered strain, with the highest production of 20.414 ± 0.674 mg/L. The multivariate data analysis methods were used in the parameter analysis of the conversion process. It was found by the hot map analysis that itaconic acid production can promote the secretion of cellulase in N. crassa. Principal component analysis suggested that itaconic acid production was closely related to the concentration of the glucose degraded from lignocelluloses, indicating that the secretion of cellulase is key to the direct conversion of cellulose to itaconic acid in the engineered N. crassa. This work demonstrates that N. crassa could be considered as a new platform in the application of cellulose conversion to itaconic acid.


Asunto(s)
Lignina/metabolismo , Neurospora crassa/genética , Neurospora crassa/metabolismo , Succinatos/metabolismo , Biomasa , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Regulación Fúngica de la Expresión Génica , Neurospora crassa/crecimiento & desarrollo
19.
Fungal Biol ; 122(6): 570-582, 2018 06.
Artículo en Inglés | MEDLINE | ID: mdl-29801802

RESUMEN

Here, we report that the Neurospora crassa FLB-3 protein, the ortholog of the Aspergillus nidulans FlbC transcription factor, is required for developmental control. Deletion of flb-3 leads to changes in hyphae morphology and affects sexual and asexual development. We identified, as putative FLB-3 targets, the N. crassa aba-1, wet-1 and vos-1 genes, orthologs of the ones involved in A. nidulans asexual development and that work downstream of FlbC (abaA, wetA and vosA). In N. crassa, these three genes require FLB-3 for proper expression; however, they appear not to be required for normal development, as demonstrated by gene expression analyses during vegetative growth and asexual development. Moreover, mutant strains in the three genes conidiate well and produce viable conidia. We also determined FLB-3 DNA-binding preferences via protein-binding microarrays (PBMs) and demonstrated by chromatin immunoprecipitation (ChIP) that FLB-3 binds the aba-1, wet-1 and vos-1 promoters. Our data support an important role for FLB-3 in N. crassa development and highlight differences between the regulatory pathways controlled by this transcription factor in different fungal species.


Asunto(s)
Proteínas Fúngicas/fisiología , Neurospora crassa/crecimiento & desarrollo , Factores de Transcripción/fisiología , Proteínas Fúngicas/genética , Regulación del Desarrollo de la Expresión Génica , Regulación Fúngica de la Expresión Génica , Hifa/genética , Hifa/crecimiento & desarrollo , Neurospora crassa/genética , Esporas Fúngicas/genética , Esporas Fúngicas/crecimiento & desarrollo , Factores de Transcripción/genética
20.
Mol Microbiol ; 108(6): 641-660, 2018 06.
Artículo en Inglés | MEDLINE | ID: mdl-29600559

RESUMEN

The Neurospora crassa Mps One Binder (MOB) proteins MOB2A and MOB2B physically interact with the Nuclear Dbf2 Related (NDR) kinase COT1 and have been shown to have overlapping functions in various aspects of asexual development. Here, we identified two N. crassa MOB2A residues, Tyr117 and Tyr119, which are potentially phosphorylated. Using phosphomimetic mob-2a mutants we have been able to establish that apart from their previously described roles, MOB2A/B are involved in additional developmental processes. Enhanced conidial germination, accompanied by conidial agglutination, in the phosphomimetic mutants indicated that MOB2A is a negative regulator of germination. Thick-section imaging of perithecia revealed slow maturation and a lack of asci alignment in the mutant strains demonstrating a role for MOB2A in sexual development. We demonstrate that even though MOB2A and MOB2B have some overlapping functions, MOB2B cannot compensate for the roles MOB2A has in conidiation and germination. Altering Tyr residues 117 and 119 impaired the physical interactions between MOB2A and COT1, most likely contributing to some of the observed effects. As cot-1 and the phosphomimetic mutants share an extragenic suppressor (gul-1), we concluded that at least some of the effects imposed by altering Tyr117 and Tyr119 are mediated by the NDR kinase.


Asunto(s)
Proteínas Fúngicas/metabolismo , Neurospora crassa/enzimología , Neurospora crassa/crecimiento & desarrollo , Proteínas Serina-Treonina Quinasas/metabolismo , Secuencias de Aminoácidos , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Mutación , Neurospora crassa/genética , Neurospora crassa/metabolismo , Fosforilación , Unión Proteica , Proteínas Serina-Treonina Quinasas/química , Proteínas Serina-Treonina Quinasas/genética , Esporas Fúngicas/enzimología , Esporas Fúngicas/genética , Esporas Fúngicas/crecimiento & desarrollo , Esporas Fúngicas/metabolismo
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