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1.
Viruses ; 16(6)2024 Jun 08.
Artículo en Inglés | MEDLINE | ID: mdl-38932224

RESUMEN

Porcine parvoviruses (PPVs) are among the most important agents of reproductive failure in swine worldwide. PPVs comprise eight genetically different species ascribed to four genera: Protoparvovirus (PPV1, PPV8), Tetraparvovirus (PPV2-3), Copiparvovirus (PPV4-6), and Chaphamaparvovirus (PPV7). In 2016, PPV7 was firstly detected in the USA and afterwards in Europe, Asia, and South America. Recently, it was also identified in Italy in pig farms with reproductive failure. This study aimed to evaluate the circulation of PPV7 in domestic and wild pigs in Sardinia, Italy. In addition, its coinfection with Porcine Circovirus 2 (PCV2) and 3 (PCV3) was analysed, and PPV7 Italian strains were molecularly characterised. PPV7 was detected in domestic pigs and, for the first time, wild pigs in Italy. The PPV7 viral genome was detected in 20.59% of domestic and wild pig samples. PPV7 detection was significantly lower in domestic pigs, with higher PCV2/PCV3 co-infection rates observed in PPV7-positive than in PPV7-negative domestic pigs. Molecular characterisation of the NS1 gene showed a very high frequency of recombination that could presumably promote virus spreading.


Asunto(s)
Coinfección , Infecciones por Parvoviridae , Parvovirus Porcino , Filogenia , Enfermedades de los Porcinos , Animales , Parvovirus Porcino/genética , Parvovirus Porcino/clasificación , Parvovirus Porcino/aislamiento & purificación , Italia/epidemiología , Infecciones por Parvoviridae/veterinaria , Infecciones por Parvoviridae/epidemiología , Infecciones por Parvoviridae/virología , Porcinos , Enfermedades de los Porcinos/virología , Enfermedades de los Porcinos/epidemiología , Coinfección/virología , Coinfección/veterinaria , Coinfección/epidemiología , Genoma Viral , Circovirus/genética , Circovirus/clasificación , Circovirus/aislamiento & purificación , Infecciones por Circoviridae/veterinaria , Infecciones por Circoviridae/virología , Infecciones por Circoviridae/epidemiología , ADN Viral/genética
2.
Vet Microbiol ; 294: 110120, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38749211

RESUMEN

Pig production is increasing annually in Africa as it is recognized as a significant source of income, livelihood and food security, particularly in rural communities. Understanding the circulating swine pathogens is crucial for the success of this emerging industry. Although there is extensive data available on the African swine fever virus due to its devastating impact on pig production, knowledge about the presence of other viral swine pathogens on the continent is still extremely limited. This review discusses what is currently known about six swine pathogens in Africa: classical swine fever virus, porcine reproductive and respiratory syndrome virus, porcine circovirus-2, porcine circovirus-3, porcine parvovirus-1, and pseudorabies virus. Gaps in our knowledge are identified and topics of future focus discussed.


Asunto(s)
Animales Salvajes , Circovirus , Enfermedades de los Porcinos , Animales , Porcinos , Enfermedades de los Porcinos/virología , Enfermedades de los Porcinos/epidemiología , África/epidemiología , Circovirus/aislamiento & purificación , Circovirus/genética , Circovirus/clasificación , Animales Salvajes/virología , Parvovirus Porcino/aislamiento & purificación , Parvovirus Porcino/genética , Virosis/veterinaria , Virosis/epidemiología , Virosis/virología , Virus del Síndrome Respiratorio y Reproductivo Porcino/aislamiento & purificación , Virus del Síndrome Respiratorio y Reproductivo Porcino/genética , Virus de la Fiebre Porcina Africana/aislamiento & purificación , Animales Domésticos/virología , Herpesvirus Suido 1/aislamiento & purificación , Infecciones por Circoviridae/veterinaria , Infecciones por Circoviridae/epidemiología , Infecciones por Circoviridae/virología , Domesticación
3.
Biologicals ; 86: 101763, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38641502

RESUMEN

This study aimed to investigate the prevalence of viral agents causing reproductive failure in pigs in Korea. In addition, two types of multiplex real-time PCR (mqPCR) were developed for the simultaneous detection of Aujeszky's disease virus (ADV) and porcine parvovirus (PPV) in mqPCR and encephalomyocarditis virus (EMCV) and Japanese encephalitis virus (JEV) in reverse transcription mqPCR (mRT-qPCR). A total of 150 aborted fetus samples collected from 2020 to 2022 were analyzed. Porcine reproductive and respiratory syndrome virus was the most prevalent (49/150 32.7%), followed by porcine circovirus type 2 (31/150, 20.7%), and PPV1 (7/150, 4.7%), whereas ADV, EMCV, and JEV were not detected. The newly developed mqPCR and mRT-qPCR could simultaneously detect and differentiate with high sensitivities and specificities. When applied to aborted fetuses, the newly developed mqPCR for PPV was 33.3% more sensitivities than the previously established diagnostic method. Amino acid analysis of the VP2 sequences of PPV isolates revealed considerable similarity to the highly pathogenic Kresse strain. This study successfully evaluated the prevalence of viral agents causing reproductive failure among swine in Korea, the developed mqPCR and mRT-qPCR methods could be utilized as effective and accurate diagnostic methods for the epidemiological surveillance of ADV, PPV, EMCV, and JEV.


Asunto(s)
Reacción en Cadena de la Polimerasa Multiplex , Enfermedades de los Porcinos , Animales , Porcinos , República de Corea/epidemiología , Enfermedades de los Porcinos/virología , Enfermedades de los Porcinos/diagnóstico , Enfermedades de los Porcinos/epidemiología , Reacción en Cadena de la Polimerasa Multiplex/métodos , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Prevalencia , Femenino , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/métodos , Embarazo , Parvovirus Porcino/genética , Parvovirus Porcino/aislamiento & purificación , Aborto Veterinario/virología , Aborto Veterinario/epidemiología , Virosis/diagnóstico , Virosis/epidemiología , Virosis/virología
4.
PLoS One ; 16(12): e0258311, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34914702

RESUMEN

There are a wide variety of porcine parvoviruses (PPVs) referred to as PPV1 to PPV7. The latter was discovered in 2016 and later reported in some countries in America, Asia, and Europe. PPV7 as a pathogenic agent or coinfection with other pathogens causing disease has not yet been determined. In the present study, we report the identification of PPV7 for the first time in Colombia, where it was found retrospectively since 2015 in 40% of the provinces that make up the country (13/32), and the virus was ratified for 2018 in 4/5 provinces evaluated. Additionally, partial sequencing (nucleotides 380 to 4000) was performed of four Colombian strains completely covering the VP2 and NS1 viral genes. A sequence identity greater than 99% was found when comparing them with reference strains from the USA and China. In three of the four Colombian strains, an insertion of 15 nucleotides (five amino acids) was found in the PPV7-VP2 capsid protein (540-5554 nt; 180-184 aa). Based on this insertion, the VP2 phylogenetic analysis exhibited two well-differentiated evolutionarily related groups. To evaluate the impact of this insertion on the structure of the PPV7-VP2 capsid protein, the secondary structure of two different Colombian strains was predicted, and it was determined that the insertion is located in the coil region and not involved in significant changes in the structure of the protein. The 3D structure of the PPV7-VP2 capsid protein was determined by threading and homology modeling, and it was shown that the insertion did not imply a change in the shape of the protein. Additionally, it was determined that the insertion is not involved in suppressing a potential B cell epitope, although the increase in length of the epitope could affect the interaction with molecules that allow a specific immune response.


Asunto(s)
Antígenos Virales , Proteínas de la Cápside , Infecciones por Parvoviridae/genética , Parvovirus Porcino , Filogenia , Enfermedades de los Porcinos/genética , Enfermedades de los Porcinos/virología , Animales , Antígenos Virales/química , Antígenos Virales/genética , Proteínas de la Cápside/química , Proteínas de la Cápside/genética , Colombia , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/química , Parvovirus Porcino/genética , Parvovirus Porcino/aislamiento & purificación , Dominios Proteicos , Porcinos
5.
Microbiol Spectr ; 9(3): e0129421, 2021 12 22.
Artículo en Inglés | MEDLINE | ID: mdl-34851175

RESUMEN

Porcine parvovirus genotype 1 (PPV1) causes reproductive disorder in swine and is prevalent in China. Recently, six new genotypes of PPVs (PPV2 through PPV7) have also been detected in Chinese swine herds. However, the coinfection status of all these seven genotypes of PPVs (PPV1-7) in China was not clarified yet. In this study, we developed a panel of PPV1-7 PCR assays with satisfied specificity, sensitivity and reproducibility and then applied to the detection of PPV1-7 in 435 clinical samples collected from eight provinces of China in 2016-2020. A total of 55.40% samples (241 out of 435) were PPV positive, while PPV2 and PPV3 (both 22.53%) belonging to the genus of Tetraparvovirus were the most prevalent genotypes. Noticeably, PPV1-7 strains were more prevalent in nursery and finishing pigs than in suckling pigs. In addition, coinfection could be detected in all eight provinces and 27.36% (119/435) samples were coinfected with two to five genotypes of PPVs. Meanwhile, the coinfection of PPVs with PCV2 was 22.30% (97/435). Twenty complete genomes of representative PPV1-7 were determined, and phylogenetic analysis confirmed the genotyping results by sequence comparisons and PCR assays. Remarkably, the PPV7 HBTZ20180519-152 strain from domestic pig was recombined from parental JX15-like and JX38-like isolates from wild boars. Selective pressure analysis based on VP2 sequences of PPV1-7 showed that they were predominantly under negative selection, while few positive selection sites could be detected in VP2 of PPV7. Overall, this systematic investigation unveils high prevalence and coinfection of PPV1-7 in China from 2016 to 2020. IMPORTANCE Porcine parvoviruses (PPVs) are prevalent in China associating with reproductive failure in swine. The coinfection of seven genotypes of PPVs (PPV1-7) might have synergistic effects on PPV1 associated SMEDI syndrome. However, the coinfection status of PPV1-7 in China is not clear yet. This study showed that PPV1-7 strains are highly prevalent (55.40%) in China and mainly in nursery and finishing pigs in recent years. In addition, the coinfections of different genotypes of PPVs (27.36%) and PPVs with PCV2 (22.30%) are common. Geographic analysis indicated that different genotypes of PPVs are widely cocirculating in China. Intriguingly, a PPV7 strain from the domestic pig was detected as a recombinant from two wild boar isolates. Selective pressure analyses showed that PPV1-7 are mainly under purifying selection. Our findings provide the first systematic investigation on the prevalence, coinfection, and evolution of PPV1 through PPV7 in Chinese swineherds from 2016 to 2020.


Asunto(s)
Infecciones por Parvoviridae/epidemiología , Parvovirus Porcino/clasificación , Parvovirus Porcino/aislamiento & purificación , Enfermedades de los Porcinos/epidemiología , Enfermedades de los Porcinos/virología , Secuencia de Aminoácidos , Animales , Secuencia de Bases , China/epidemiología , Coinfección/epidemiología , ADN Viral/genética , Genotipo , Parvovirus Porcino/genética , Prevalencia , Análisis de Secuencia de ADN , Sus scrofa/virología , Porcinos
6.
Biotechnol Bioeng ; 118(8): 3251-3262, 2021 08.
Artículo en Inglés | MEDLINE | ID: mdl-34129733

RESUMEN

Due to the high variation in viral surface properties, a platform method for virus purification is still lacking. A potential alternative to the high-cost conventional methods is aqueous two-phase systems (ATPSs). However, optimizing virus purification in ATPS requires a large experimental design space, and the optimized systems are generally found to operate at high ATPS component concentrations. The high concentrations capitalize on hydrophobic and electrostatic interactions to obtain high viral particle yields. This study investigated using osmolytes as driving force enhancers to reduce the high concentration of ATPS components while maintaining high yields. The partitioning behavior of porcine parvovirus (PPV), a nonenveloped mammalian virus, and human immunodeficiency virus-like particle (HIV-VLP), a yeast-expressed enveloped VLP, were studied in a polyethylene glycol (PEG) 12 kDa-citrate system. The partitioning of the virus modalities was enhanced by osmoprotectants glycine and betaine, while trimethylamine N-oxide was ineffective for PPV. The increased partitioning to the PEG-rich phase pertained only to viruses, resulting in high virus purification. Recoveries were 100% for infectious PPV and 92% for the HIV-VLP, with high removal of the contaminant proteins and more than 60% DNA removal when glycine was added. The osmolyte-induced ATPS demonstrated a versatile method for virus purification, irrespective of the expression system.


Asunto(s)
VIH-1/aislamiento & purificación , Parvovirus Porcino/aislamiento & purificación , Virión/aislamiento & purificación , Animales , Línea Celular , VIH-1/química , Humanos , Parvovirus Porcino/química , Porcinos , Virión/química
7.
Arch Virol ; 166(8): 2249-2254, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-33999261

RESUMEN

Porcine parvovirus 1 (PPV1) is a major cause of reproductive failure in pigs. To date, six additional porcine parvoviruses (PPV2-PPV7) have been identified. In this study, we detected 11 PPV1 strains, five PPV3 strains, three PPV4 strains, six PPV5 strains, five PPV6 strains, and one PPV7 strain in Korean wild boars. PPV1, -3, and -5, and PPV6 from Korean wild boars harbor conserved motifs within the Ca2+ binding loop and the catalytic center of the PLA1 motif. Intra-species recombination among PPV7 strains was also identified. Genetic characterization revealed that PPV1 from Korean wild boars may be similar to virulent PPV strains.


Asunto(s)
ADN Viral/genética , Infecciones por Parvoviridae/virología , Parvovirus Porcino/clasificación , Sus scrofa/virología , Sustitución de Aminoácidos , Animales , Femenino , Técnicas de Genotipaje , Masculino , Parvovirus Porcino/genética , Parvovirus Porcino/aislamiento & purificación , Filogenia , República de Corea , Porcinos
8.
Arq. bras. med. vet. zootec. (Online) ; 73(3): 757-761, May-June 2021. tab
Artículo en Inglés | LILACS, VETINDEX | ID: biblio-1278364

RESUMEN

Neste estudo, 308 amostras de fetos mumificados foram testadas para parvovírus suíno (PPV), circovírus suíno tipos 2 e 3 (PCV2 e PCV3) e leptospiras patogênicas. A idade gestacional no momento da perda gestacional e a frequência da mumificação fetal de acordo com a ordem de parto também foram investigadas. As amostras foram coletadas em granjas comerciais de criação de suínos da região sul do Brasil que apresentassem taxas de mumificação fetal igual ou maiores a 2,5%. Fragmentos de pulmão, rim, fígado e coração de fetos suínos mumificados foram coletados para análise molecular. Resultados da PCR foram classificados de acordo com a região de origem das amostras, tendo Santa Catarina, Paraná e Rio Grande do Sul contabilizado 87 (28,25%), 89 (28,90%) e 132 (42,86%) do total de amostras de fetos suínos mumificados, respectivamente. Coinfecções foram observadas na maioria dos casos e PCV3 foi o agente mais prevalente detectado, encontrado em 298 amostras (96,75%). A maioria das perdas gestacionais foi observada entre 50 e 70 dias de gestação (168; 54,5%) e a mumificação fetal não foi associada à ordem de parto das matrizes. Os achados sugerem que as altas taxas de fetos suínos mumificados na região Sul do Brasil podem ser explicadas pela infecção com esses agentes virais.(AU)


Asunto(s)
Animales , Embarazo , Porcinos , Infecciones por Circoviridae/epidemiología , Infecciones por Parvoviridae/epidemiología , Muerte Fetal/etiología , Leptospirosis/epidemiología , Circoviridae/aislamiento & purificación , Parvovirus Porcino/aislamiento & purificación , Coinfección/veterinaria , Leptospira/aislamiento & purificación
9.
Pol J Vet Sci ; 24(1): 43-49, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-33847096

RESUMEN

In this study, we developed a SYBR Green I real-time PCR method for the rapid and sensitive detection of novel porcine parvovirus 7 (PPV7). Specific primers were designed based on the highly conserved region within the Capsid gene of PPV7. The established method was 1,000 times more sensitive than the conventional PCR method and had a detection limit of 35.6 copies. This method was specific and had no cross-reactions with PCV2, PCV3, PRV, PEDV, PPV1, and PPV6. Experiments testing the intra and interassay precision demonstrated a high reproducibility. Testing the newly established method with 200 clinical samples revealed a detection rate up to 17.5% higher than that of the conventional PCR assay. The established method could provide technical support for clinical diagnosis and epidemiological investigation of PPV7.


Asunto(s)
Benzotiazoles , Diaminas , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/aislamiento & purificación , Quinolinas , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Enfermedades de los Porcinos/virología , Animales , Infecciones por Parvoviridae/diagnóstico , Infecciones por Parvoviridae/virología , Reproducibilidad de los Resultados , Sensibilidad y Especificidad , Porcinos , Enfermedades de los Porcinos/diagnóstico
10.
Infect Genet Evol ; 89: 104735, 2021 04.
Artículo en Inglés | MEDLINE | ID: mdl-33516972

RESUMEN

Porcine circovirus type 2 (PCV2) and protoparvovirus 1 (PPV) were detected as single infection (6/131) and (11/131) respectively, or co-infection (6/131) in fetuses and stillborn piglets from normal deliveries in a farm without reproductive problems. Twenty in twenty-three positive samples were over 70 days of gestation, which is when the fetus becomes immunocompetent, and the presence of a NADL-2 PPV strain suggests fetal immune system impairment. Phylogenetic analysis of sequences obtained showed that 8/9 sequences are related to cluster 13 and the remaining is grouped into cluster 11 sequences. An increase in variability in ORF2 sequences in Argentina was observed. It is not clear whether the detection of fetuses positive to PPV and PCV2 is of epidemiological importance in a subclinically affected farm. However, the results of this study showed that currently used vaccines and vaccine protocols do not fully protect against PPV or PCV2 fetus infection.


Asunto(s)
Infecciones por Circoviridae/veterinaria , Circovirus/aislamiento & purificación , Parvovirus Porcino/aislamiento & purificación , Enfermedades de los Porcinos/fisiopatología , Animales , Infecciones por Circoviridae/fisiopatología , Porcinos
11.
J Virol Methods ; 284: 113924, 2020 10.
Artículo en Inglés | MEDLINE | ID: mdl-32621958

RESUMEN

Porcine parvovirus (PPV) is one of the major causes of reproductive pig disease. Due to its serious nature, wide spread and consequent great damage to the swine industry, an effective, rapid and convenient method for its detection is needed. A loop-mediated isothermal amplification (LAMP) assay was established to detect PPV infection. Two pairs of primers were specifically designed to recognize the six different sequences of open reading frame1 (ORF1) gene. The optimized LAMP program was as follows: 50 min at 59 °C followed by 3 min at 80 °C.The amplified products were analyzed both by visual inspection after staining with SYBR Green I dye and by conventional agarose gel electrophoresis. Both methods showed the same sensitivity. The limit of detection (LOD) for PPV by LAMP was 10 copies, which is 100-fold lower than conventional PCR. Our LAMP assay did not cross-react with other viruses. We used the established LAMP system to test 1100 field samples and detected 660 positives. The LAMP detection method for PPV represents a visual, sensitive and rapid assay which can detect the virus in the field, offering an attractive alternative for the PPV detection methods currently in use.


Asunto(s)
Técnicas de Diagnóstico Molecular/veterinaria , Técnicas de Amplificación de Ácido Nucleico/veterinaria , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/aislamiento & purificación , Enfermedades de los Porcinos/diagnóstico , Animales , Benzotiazoles , Diaminas , Infecciones por Parvoviridae/diagnóstico , Parvovirus Porcino/genética , Sistemas de Atención de Punto , Quinolinas , Sensibilidad y Especificidad , Porcinos , Temperatura
12.
Pol J Vet Sci ; 23(2): 197-202, 2020 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-32627977

RESUMEN

In this study, a SYBR Green-based real-time quantitative polymerase chain reaction (qPCR) assay was developed for rapid detection of porcine parvovirus (PPV) 6. Primer pairs targeting the conserved regions of PPV6 Capsid gene were designed. Sensitivity analyses revealed the lowest detection limit of the SYBR Green-based real-time PCR assay to be 47.8 copies/µL, which indicated it was 1000 times higher than that found in the conventional PCR investigations. This assay was specific and showed no cross-species amplification with other six porcine viruses. The assay demonstrated high repeatability and reproducibility; the intra- and inter-assay coefficients of variation were 0.79% and 0.42%, respectively. The positive detection rates of 180 clinical samples with SYBR Green-based real-time PCR and conventional PCR were 12.22% (22/180) and 4.44% (8/180), respectively. Our method is sensitive, specific, and reproducible. The use of SYBR Green-based real-time PCR may be suitable for the clinical detection and epidemiological investigation of PPV6.


Asunto(s)
Benzotiazoles , Diaminas , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/aislamiento & purificación , Quinolinas , Reacción en Cadena en Tiempo Real de la Polimerasa/veterinaria , Enfermedades de los Porcinos/virología , Animales , Infecciones por Parvoviridae/diagnóstico , Infecciones por Parvoviridae/virología , Parvovirus Porcino/clasificación , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Reproducibilidad de los Resultados , Sensibilidad y Especificidad , Porcinos , Enfermedades de los Porcinos/diagnóstico
13.
Transbound Emerg Dis ; 67(6): 2467-2474, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-32304349

RESUMEN

We developed a multiplex ligation-dependent probe amplification (MLPA) assay for the simultaneous detection of 6 clinically relevant viral pathogens causing porcine reproductive failure, that is porcine reproductive and respiratory syndrome virus (PRRSV), Japanese encephalitis virus (JEV), classical swine fever virus (CSFV), porcine circovirus type 2 (PCV2), pseudorabies virus (PRV) and porcine parvovirus (PPV). The limits of detection for the assay varied among the 6 target organisms from 1 to 8 copies per MLPA assay. The MLPA assay was evaluated with 346 heparinized porcine umbilical cord blood specimens, and the results of the assay were compared to those of real-time PCR. The MLPA assay showed specificities and sensitivities of 99.2% and 100%, respectively, for PRRSV; 100% and 100%, respectively, for CSFV, PCV2, PRV and PPV. No sample was found to be positive for JEV by either the MLPA assay or the real-time PCR. In conclusion, the MLPA assay has comparable clinical sensitivity to that of real-time PCR assay and provides a useful tool for fast screening porcine reproductive failure-associated viruses.


Asunto(s)
Circovirus/aislamiento & purificación , Virus de la Fiebre Porcina Clásica/aislamiento & purificación , Herpesvirus Suido 1/aislamiento & purificación , Parvovirus Porcino/aislamiento & purificación , Virus del Síndrome Respiratorio y Reproductivo Porcino/aislamiento & purificación , Enfermedades de los Porcinos/virología , Virosis/veterinaria , Animales , Circovirus/genética , Virus de la Fiebre Porcina Clásica/genética , Femenino , Sangre Fetal/virología , Herpesvirus Suido 1/genética , Límite de Detección , Reacción en Cadena de la Polimerasa Multiplex/veterinaria , Parvovirus Porcino/genética , Virus del Síndrome Respiratorio y Reproductivo Porcino/genética , Sensibilidad y Especificidad , Porcinos , Virosis/virología
14.
BMC Vet Res ; 16(1): 113, 2020 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-32295585

RESUMEN

BACKGROUND: with the advantage of sequencing technology, many novel porcine parvoviruses (PPV) rather than PPV1 has been reported. This study ultilized specific PCR- based method and gene- based analysis to study the presence and genetic diversity of porcine parvoviruses in South Korea in 2018. RESULTS: The present study was conducted in 2018 and found PPV1 and PPV7 in nine out of 151 field samples (organs and semen) by the PCR method. Among these, the complete genome sequences of five strains (N2, N91, N108, N133, and N141) were recovered. Phylogenic analysis revealed that the strains N2, N91, and N108 belong to the PPV1 genotype, while N133 and N141 belong to PPV7 genotype. The PPV7 strains collected in this study had deletion mutations in the VP2 gene but differed from that of PPV7 strains collected in 2017. Among the PPV1 strains, the amino acid variations in the B cell epitopes of the VP2 protein were observed between three Korean PPV1 field strains (N2, N91, and N108) and the reference PPV1 strains. Those substitutions resulted in six out of 12 predicted epitopes having significant differences in antigenic index compared to the other PPV1 strains. CONCLUSIONS: This study confirmed the presence of different genotypes of porcine parvoviruses in South Korea. The PPVs circulating in South Korea were phylogenetically classified as PPV1 and PPV7 genotypes. Three Korean PPV1 strains collected in 2018 were predicted to have antigenic alteration in VP2 compared to several reference strains of PPV1.


Asunto(s)
Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/genética , Parvovirus Porcino/aislamiento & purificación , Enfermedades de los Porcinos/virología , Animales , Epítopos de Linfocito B , Variación Genética , Genotipo , Infecciones por Parvoviridae/epidemiología , Infecciones por Parvoviridae/virología , Parvovirus Porcino/clasificación , Filogenia , Reacción en Cadena de la Polimerasa/veterinaria , República de Corea/epidemiología , Porcinos , Enfermedades de los Porcinos/epidemiología
15.
Microbiol Immunol ; 64(5): 366-376, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-32096557

RESUMEN

Worldwide, many emerging porcine parvoviruses (PPVs) have been linked to porcine circovirus-2 (PCV2) associated disease (PCVAD), which includes post-weaning multi-systemic wasting syndrome (PMWS), PCV2-related reproductive failure (PCV2-RF), as well as other syndromes. To determine the DNA prevalence of PPVs and their relationship with PMWS and PCV2-RF in Mexico, 170 formalin-fixed paraffin-embedded tissues were selected from archival collections to detect PPVs using a nested polymerase chain reaction. The tissues were composed of 50 PMWS cases, 20 age-matched tissues from healthy pigs, 56 PCV2-related reproductive failure (PCV2+ -RF) cases, and 44 PCV2- -RF cases. Overall, PPV2 and PPV6 were the most prevalent species (90.0% and 74.7%, respectively). In 8-11 week old pigs, the highest prevalence was for PPV6 and PPV3. Concerning reproductive failure, the PCV2-affected farms had a significantly higher prevalence for PPV6 (61.6%) and PPV5 (36.4%) than the PCV2-unaffected farms (35.0% and 5.0%, respectively). The concurrent infection rate was high, being significant for PPV2/PPV4 and PPV1/PPV5 within the PMWS cases and for PPV6/PPV5 among the PCV2+ -RF tissues. PPV5 showed a significant relationship with PMWS, whereas PPV5 and PPV6 were significant for PCVAD. The prevalence and coinfection rate of PPVs in Mexico were markedly higher than that described in other countries, denoting that PPV5 and PPV6 might have a potential role in PCVAD in Mexico. It is concluded that it is likely that the density population of pigs in Mexico is contributing to high PPV inter-species and PCV2 coinfections which might lead to a different pathogenic outcome.


Asunto(s)
Infecciones por Circoviridae/veterinaria , Circovirus/aislamiento & purificación , Coinfección , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/aislamiento & purificación , Enfermedades de los Porcinos/virología , Animales , Infecciones por Circoviridae/epidemiología , Infecciones por Circoviridae/virología , Circovirus/genética , Coinfección/veterinaria , Coinfección/virología , ADN Viral/aislamiento & purificación , México , Infecciones por Parvoviridae/epidemiología , Infecciones por Parvoviridae/virología , Parvovirus Porcino/genética , Prevalencia , Estudios Retrospectivos , Porcinos/virología , Enfermedades de los Porcinos/epidemiología
16.
Microb Pathog ; 141: 104027, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32007620

RESUMEN

The clinical implications of recently discovered porcine circovirus 3 (PCV3) infections are still unknown. The potential role of this emerging virus in reproductive loss in swine has been described. Herein, we report a high prevalence of PCV3 in mummified fetuses from sows maintained in modern farms in Rio Grande do Sul, Santa Catarina, Paraná, Goiás, and Mato Grosso do Sul states, Brazil. For this analysis, 276 mummified fetuses from 11 commercial swine farms were included. The presence of PCV3 DNA was confirmed using PCR, and the complete sequence of five different viral strains was obtained. Sequences of PCV3 genomes available on GenBank were then used for phylogenetic tree construction. Of the 276 mummified fetuses examined, 270 (nearly 97%) were positive for PCV3. In 93.1% of the fetuses, co-infections with at least one of the following agents were identified: porcine parvovirus (PPV), porcine circovirus 2 (PCV2) and Leptospira spp. Twelve fetuses were positive for PCV3 alone. The amino acid sequence of the capsid gene for the five viral strains shared 98-100% homology among them. Analysis of the DNA sequence indicates that the viruses identified in this study belong to the PCV3a1 subgroup. In summary, PCV3 DNA was detected in mummified fetuses at a surprisingly high rate. The role of PCV3 in porcine circovirus-associated disease (PCVAD) is still uncertain. However, considering that PCV3 has been detected in a variety of conditions, even in healthy animals, the present results confirm the need to investigate PCV3 as a causative agent of fetal mummification in swine.


Asunto(s)
Circovirus/genética , Feto/virología , Genoma Viral , Animales , Brasil/epidemiología , Proteínas de la Cápside/genética , Infecciones por Circoviridae/epidemiología , Infecciones por Circoviridae/veterinaria , Circovirus/clasificación , Circovirus/patogenicidad , Coinfección/epidemiología , Coinfección/veterinaria , Granjas , Leptospira/aislamiento & purificación , Leptospirosis/veterinaria , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/aislamiento & purificación , Filogenia , Prevalencia , Porcinos , Enfermedades de los Porcinos/virología
17.
BMC Vet Res ; 16(1): 57, 2020 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-32059673

RESUMEN

BACKGROUND: PPV is one of the most important pathogens causing porcine reproductive disorder. It has been shown in clinical cases to be a commonly mixed infection with other important swine diseases which can aggravate the severity of the disease and bring serious economic losses to the pig industry. Serological methods, such as hemagglutination inhibition assays (HAI), serum neutralization (SN), and the modified direct complement-fixation (MDCF) test were utilized earlier, whereas the enzyme-linked immunosorbent assay (ELISA) is the most frequently applied assay to detect PPV-specific antibodies. RESULTS: We establish the visible protein chip and the cyanine dye 3 (Cy3)-labeled protein chip to detect the clinical serum from pigs. In this study, the recombinant protein VP2 of PPV was expressed in E.coli, purified with nickel magnetic beads, and then printed onto epoxy-coated glass slides for preparation of the protein chip. After a series of experiments, the conditions of antigen protein concentration, incubation time of primary antibody or secondary antibody, and optimal serum dilution fold were optimized, resulting in a successful visible protein chip and Cy3-labeled protein chip. The results showed that the positive serum, diluted up to 6000-fold, can be detected by the visible protein chip, and the positive serum, diluted up to 12,800-fold, can be detected by the Cy3-labeled protein chip, suggesting the high sensitivity of these protein chips. Moreover, the positive detection ratio, sensitivity, and specificity of these two kinds of protein chips were higher than those of commercial ELISA antibody detection kits. CONCLUSION: Overall, these two protein chips can be used to rapidly diagnose clinical samples with high throughput.


Asunto(s)
Anticuerpos Antivirales/sangre , Dispositivos Laboratorio en un Chip/veterinaria , Infecciones por Parvoviridae/veterinaria , Parvovirus Porcino/aislamiento & purificación , Enfermedades de los Porcinos/virología , Animales , Dispositivos Laboratorio en un Chip/virología , Infecciones por Parvoviridae/diagnóstico , Infecciones por Parvoviridae/virología , Sensibilidad y Especificidad , Porcinos , Enfermedades de los Porcinos/sangre , Enfermedades de los Porcinos/diagnóstico
18.
J Nanobiotechnology ; 18(1): 7, 2020 Jan 07.
Artículo en Inglés | MEDLINE | ID: mdl-31910833

RESUMEN

BACKGROUND: Antibodies are an important reagent to determine the specificity and accuracy of diagnostic immunoassays for various diseases. However, traditional antibodies have several shortcomings due to their limited abundance, difficulty in permanent storage, and required use of a secondary antibody. Nanobodies, which are derived from single-chain camelid antibodies, can circumvent many of these limitations and, thus, appear to be a promising substitute. In the presented study, a sandwich ELISA-like immunoassay and direct fluorescent assay with high sensitivity, good specificity, and easy operation were the first time to develop for detecting porcine parvovirus (PPV). After screening PPV viral particles 2 (VP2) specific nanobodies, horseradish peroxidase (HRP) and enhanced green fluorescent protein (EGFP) fusions were derived from the nanobodies by recombinant technology. Finally, using the nanobody-HRP and -EGFP fusions as probes, the developed immunoassays demonstrate specific, sensitive, and rapid detection of PPV. RESULTS: In the study, five PPV-VP2 specific nanobodies screened from an immunised Bactrian camel were successfully expressed with the bacterial system and purified with a Ni-NTA column. Based on the reporter-nanobody platform, HRP and EGFP fusions were separately produced by transfection of HEK293T cells. A sandwich ELISA-like assay for detecting PPV in the samples was firstly developed using PPV-VP2-Nb19 as the capture antibody and PPV-VP2-Nb56-HRP fusions as the detection antibody. The assay showed 92.1% agreement with real-time PCR and can be universally used to surveil PPV infection in the pig flock. In addition, a direct fluorescent assay using PPV-VP2-Nb12-EGFP fusion as a probe was developed to detect PPV in ST cells. The assay showed 81.5% agreement with real-time PCR and can be used in laboratory tests. CONCLUSIONS: For the first time, five PPV-VP2 specific nanobody-HRP and -EGFP fusions were produced as reagents for developing immunoassays. A sandwich ELISA-like immunoassay using PPV-VP2-Nb19 as the capture antibody and PPV-VP2-Nb56-HRP fusion as the detection antibody was the first time to develop for detecting PPV in different samples. Results showed that the immunoassay can be universally used to surveil PPV infection in pig flock. A direct fluorescent assay using PPV-VP2-Nb12-EGFP as a probe was also developed to detect PPV in ST cells. The two developed immunoassays eliminate the use of commercial secondary antibodies and shorten detection time. Meanwhile, both assays display great developmental prospect for further commercial production and application.


Asunto(s)
Proteínas Fluorescentes Verdes/metabolismo , Peroxidasa de Rábano Silvestre/metabolismo , Inmunoensayo , Parvovirus Porcino/aislamiento & purificación , Proteínas Recombinantes de Fusión/metabolismo , Anticuerpos de Dominio Único/metabolismo , Secuencia de Aminoácidos , Escherichia coli/metabolismo , Células HEK293 , Humanos , Cadenas Pesadas de Inmunoglobulina/química , Cadenas Pesadas de Inmunoglobulina/metabolismo , Región Variable de Inmunoglobulina/química , Región Variable de Inmunoglobulina/metabolismo , Indicadores y Reactivos , Anticuerpos de Dominio Único/química , Proteínas Virales/inmunología
19.
Biotechnol Prog ; 36(4): e2968, 2020 07.
Artículo en Inglés | MEDLINE | ID: mdl-31989781

RESUMEN

The contamination of oral rotavirus vaccines by porcine circovirus (PCV) raised questions about potential PCV contamination of other biological products when porcine trypsin or pepsin is used in production process. Several methods can be potentially implemented as a safety barrier when animal derived trypsin or pepsin is used. Removal of PCV is difficult by the commonly used viral filters with the pore size cutoff of approximately 20 nm because of the smaller size of PCV particles that are around 17 nm. It was speculated that operating the chromatography step at a pH higher than pepsin's low pI, but lower than pIs, of most viruses would allow the pepsin to flow through the resin and be recovered from the flow through pool whilst the viruses would be retained on the resin. In this study, we investigated low pH inactivation of viruses including PCV Type 1 (PCV1) and PCV1 removal by cation exchange chromatography (CEX) in the presence of pepsin. Both parvovirus and PCV1 could be effectively inactivated by low pH and PCV1 could be removed by POROS 50HS CEX. The POROS 50HS method presented in this article is helpful for designing other CEX methods for the same purpose and not much difference would be expected for similar product intermediates and same process parameters. While the effectiveness needs to be confirmed for specific applications, the results demonstrate that both low pH (pH 1.7) and CEX methods were successful in eliminating PCV1 and thus either can be considered as an effective virus barrier.


Asunto(s)
Circovirus/aislamiento & purificación , Contaminación de Medicamentos , Parvovirus Porcino/aislamiento & purificación , Pepsina A/química , Animales , Cromatografía , Circovirus/química , Parvovirus Porcino/química , Pepsina A/aislamiento & purificación , Infecciones por Rotavirus/prevención & control , Infecciones por Rotavirus/veterinaria , Infecciones por Rotavirus/virología , Vacunas contra Rotavirus/química , Vacunas contra Rotavirus/aislamiento & purificación , Porcinos/virología , Vacunas Virales
20.
Blood Transfus ; 18(1): 30-39, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-30865581

RESUMEN

BACKGROUND: Viral reduction and inactivation of cell-derived biologicals is paramount for patients' safety and so viral reduction needs to be demonstrated to regulatory bodies in order to obtain marketing authorisation. Allogeneic human blood-derived biological medicinal products require special attention. APOSECTM, the secretome harvested from selected human blood cells, is a new biological with promising regenerative capabilities. We evaluated the effectiveness of inactivation of model viruses by methylene blue/light treatment, lyophilisation, and gamma irradiation during the manufacturing process of APOSECTM. MATERIALS AND METHODS: Samples of intermediates of APOSECTM were acquired during the manufacturing process and spiked with bovine viral diarrhoea virus (BVDV), human immunodeficiency virus type 1 (HIV-1), pseudorabies virus (PRV), hepatitis A virus (HAV), and porcine parvovirus (PPV). Viral titres were assessed with suitable cell lines. RESULTS: Methylene blue-assisted viral reduction is mainly effective against enveloped viruses: the minimum log10 reduction factors for BVDV, HIV-1, and PRV were ≥6.42, ≥6.88, and ≥6.18, respectively, with no observed residual infectivity. Viral titres of both HAV and PPV were not significantly reduced, indicating minor inactivation of non-enveloped viruses. Lyophilisation had minor effects on the viability of several enveloped model viruses. Gamma irradiation contributes to the viral safety by reduction of enveloped viruses (BVDV: ≥2.42; HIV-1: 4.53; PRV: ≥4.61) and to some degree of non-enveloped viruses as seen for HAV with a minimum log10 reduction factor of 2.92. No significant reduction could be measured for the non-enveloped virus PPV (2.60). DISCUSSION: Three manufacturing steps of APOSECTM were evaluated under Good Laboratory Practice conditions for their efficacy at reducing and inactivating potentially present viruses. It could be demonstrated that all three steps contribute to the viral safety of APOSECTM.


Asunto(s)
Leucocitos Mononucleares/virología , Medicina Regenerativa/métodos , Animales , Bovinos , Línea Celular , Chlorocebus aethiops , Virus de la Diarrea Viral Bovina/aislamiento & purificación , Rayos gamma , VIH-1/aislamiento & purificación , Virus de la Hepatitis A/aislamiento & purificación , Herpesvirus Suido 1/aislamiento & purificación , Humanos , Leucocitos Mononucleares/efectos de los fármacos , Leucocitos Mononucleares/efectos de la radiación , Macaca mulatta , Azul de Metileno/farmacología , Parvovirus Porcino/aislamiento & purificación , Porcinos , Inactivación de Virus
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