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1.
Infect Immun ; 86(8)2018 08.
Artículo en Inglés | MEDLINE | ID: mdl-29844239

RESUMEN

Klebsiella pneumoniae is an opportunistic pathogen, and its hypervirulent variants cause serious invasive community-acquired infections. A genomic view of K. pneumoniae NTUH-2044 for the carbohydrate phosphotransferase system (PTS) found a putative fructose PTS, namely, the Frw PTS gene cluster. The deletion mutant and the complemented mutant of frwC (KP1_1992), which encodes the putative fructose-specific enzyme IIC, were constructed, and the phenotypes were characterized. This transmembrane PTS protein is responsible for fructose utilization. frwC deletion can enhance biofilm formation and capsular polysaccharide (CPS) biosynthesis but decreases the growth rate and lethality in mice. frwC expression was repressed in the cyclic AMP receptor protein (CRP) mutant. Electrophoretic mobility shift assay showed that CRP can directly bind to the promoter of frwC These results indicated that frwC expression is controlled by CRP directly and that such regulation contributes to bacterial growth, CPS synthesis, and the virulence of the Δcrp strain. The findings help elucidate fructose metabolism and the CRP regulatory mechanism in K. pneumoniae.


Asunto(s)
Proteína Receptora de AMP Cíclico/metabolismo , Fructosa/metabolismo , Regulación Bacteriana de la Expresión Génica , Infecciones por Klebsiella/patología , Klebsiella pneumoniae/crecimiento & desarrollo , Klebsiella pneumoniae/patogenicidad , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Animales , Cápsulas Bacterianas/metabolismo , ADN Bacteriano/metabolismo , Modelos Animales de Enfermedad , Ensayo de Cambio de Movilidad Electroforética , Femenino , Eliminación de Gen , Prueba de Complementación Genética , Infecciones por Klebsiella/microbiología , Klebsiella pneumoniae/genética , Ratones Endogámicos BALB C , Viabilidad Microbiana , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Regiones Promotoras Genéticas , Unión Proteica , Análisis de Supervivencia , Virulencia
2.
Mol Microbiol ; 101(5): 795-808, 2016 09.
Artículo en Inglés | MEDLINE | ID: mdl-27218601

RESUMEN

To survive in a continuously changing environment, bacteria sense concentration gradients of attractants or repellents, and purposefully migrate until a more favourable habitat is encountered. While glucose is known as the most effective attractant, the flagellar biosynthesis and hence chemotactic motility has been known to be repressed by glucose in some bacteria. To date, the only known regulatory mechanism of the repression of flagellar synthesis by glucose is via downregulation of the cAMP level, as shown in a few members of the family Enterobacteriaceae. Here we show that, in Vibrio vulnificus, the glucose-mediated inhibition of flagellar motility operates by a completely different mechanism. In the presence of glucose, EIIA(Glc) is dephosphorylated and inhibits the polar localization of FapA (flagellar assembly protein A) by sequestering it from the flagellated pole. A loss or delocalization of FapA results in a complete failure of the flagellar biosynthesis and motility. However, when glucose is depleted, EIIA(Glc) is phosphorylated and releases FapA such that free FapA can be localized back to the pole and trigger flagellation. Together, these data provide new insight into a bacterial strategy to reach and stay in the glucose-rich area.


Asunto(s)
Flagelos/metabolismo , Glucosa/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/metabolismo , Vibrio vulnificus/metabolismo , Proteínas Bacterianas/metabolismo , Movimiento Celular/fisiología , Quimiotaxis/fisiología , Proteínas de Escherichia coli/biosíntesis , Proteínas de Escherichia coli/metabolismo , Glucosa/farmacología , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Fosforilación , Biosíntesis de Proteínas
3.
Biotechnol Appl Biochem ; 61(2): 237-47, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24152126

RESUMEN

Collagen has been proven to be a valuable biomedical material for many medical applications. Human-like collagen (HLC) is a novel important biomedical material with diverse medical applications. In this work, recombinant Escherichia coli BL21 3.7 ∆ptsG was constructed, the characters of ptsG mutant strain were analyzed, and real-time quantitative polymerase chain reaction (PCR) was applied to investigate the effect of ptsG gene deletion on the transcriptional level of the phosphotransferase system (PTS) genes responsible for glucose transport. The HLC production and cell growth ability were 1.33- and 1.24-fold higher than those of its parent strain in the fermentation medium, respectively, and 1.16- and 1.17-fold in the modified minimal medium individually. The acetate accumulation decreased by 42%-56% compared to its parent strain in the fermentation medium, and 70%-87% in the modified minimal medium. The results of RT-qPCR showed that the transcriptional level of crr, ptsH, ptsI, and blgF in ptsG mutant all decreased dramatically, which inferred a decrease in the glucose uptake rate, but the transcriptional level of FruB and manX increased slightly, which demonstrated the activation of fructose- and mannose-specific transport pathways in the ptsG mutant. This study demonstrates that ptsG deletion is an effective strategy to reduce acetate accumulation and increase biomass and HLC production.


Asunto(s)
Colágeno/biosíntesis , Glucosa/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Colágeno/química , Colágeno/uso terapéutico , Escherichia coli , Fermentación , Humanos , Mutación , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética
4.
J Biol Chem ; 287(33): 27731-42, 2012 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-22722928

RESUMEN

The control of several catabolic operons in bacteria by transcription antitermination is mediated by RNA-binding proteins that consist of an RNA-binding domain and two reiterated phosphotransferase system regulation domains (PRDs). The Bacillus subtilis GlcT antitermination protein regulates the expression of the ptsG gene, encoding the glucose-specific enzyme II of the phosphotransferase system. In the absence of glucose, GlcT becomes inactivated by enzyme II-dependent phosphorylation at its PRD1, whereas the phosphotransferase HPr phosphorylates PRD2. However, here we demonstrate by NMR analysis and mass spectrometry that HPr also phosphorylates PRD1 in vitro but with low efficiency. Size exclusion chromatography revealed that non-phosphorylated PRD1 forms dimers that dissociate upon phosphorylation. The effect of HPr on PRD1 was also investigated in vivo. For this purpose, we used GlcT variants with altered domain arrangements or domain deletions. Our results demonstrate that HPr can target PRD1 when this domain is placed at the C terminus of the protein. In agreement with the in vitro data, HPr exerts a negative control on PRD1. This work provides the first insights into how specificity is achieved in a regulator that contains duplicated regulatory domains with distinct dimerization properties that are controlled by phosphorylation by different phosphate donors. Moreover, the results suggest that the domain arrangement of the PRD-containing antitermination proteins is under selective pressure to ensure the proper regulatory output, i.e. transcription antitermination of the target genes specifically in the presence of the corresponding sugar.


Asunto(s)
Bacillus subtilis/metabolismo , Proteínas Bacterianas/metabolismo , Regulación Bacteriana de la Expresión Génica/fisiología , Regulación Enzimológica de la Expresión Génica/fisiología , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Proteínas de Unión al ARN/metabolismo , Factores de Transcripción/metabolismo , Bacillus subtilis/genética , Proteínas Bacterianas/genética , Resonancia Magnética Nuclear Biomolecular , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Fosforilación/fisiología , Estructura Terciaria de Proteína , Proteínas de Unión al ARN/genética , Factores de Transcripción/genética
5.
J Bacteriol ; 194(5): 1024-35, 2012 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-22178967

RESUMEN

The glucose-phosphotransferase system (PTS) in Escherichia coli K-12 is a complex sensory and regulatory system. In addition to its central role in glucose uptake, it informs other global regulatory networks about carbohydrate availability and the physiological status of the cell. The expression of the ptsG gene encoding the glucose-PTS transporter EIICB(Glc) is primarily regulated via the repressor Mlc, whose inactivation is glucose dependent. During transport of glucose and dephosphorylation of EIICB(Glc), Mlc binds to the B domain of the transporter, resulting in derepression of several Mlc-regulated genes. In addition, Mlc can also be inactivated by the cytoplasmic protein MtfA in a direct protein-protein interaction. In this study, we identified the binding site for Mlc in the carboxy-terminal region of MtfA by measuring the effect of mutated MtfAs on ptsG expression. In addition, we demonstrated the ability of MtfA to inactivate an Mlc super-repressor, which cannot be inactivated by EIICB(Glc), by using in vivo titration and gel shift assays. Finally, we characterized the proteolytic activity of purified MtfA by monitoring cleavage of amino 4-nitroanilide substrates and show Mlc's ability to enhance this activity. Based on our findings, we propose a model of MtfA as a glucose-regulated peptidase activated by cytoplasmic Mlc. Its activity may be necessary during the growth of cultures as they enter the stationary phase. This proteolytic activity of MtfA modulated by Mlc constitutes a newly identified PTS output signal that responds to changes in environmental conditions.


Asunto(s)
Escherichia coli K12/metabolismo , Proteínas de Escherichia coli/metabolismo , Regulación Bacteriana de la Expresión Génica , Péptido Hidrolasas/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Mapeo de Interacción de Proteínas , Proteínas Represoras/metabolismo , Sitios de Unión , Ensayo de Cambio de Movilidad Electroforética , Escherichia coli K12/genética , Péptido Hidrolasas/genética , Unión Proteica , Dominios y Motivos de Interacción de Proteínas
6.
Appl Environ Microbiol ; 76(1): 370-4, 2010 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-19880641

RESUMEN

Corynebacterium glutamicum efficiently utilizes maltose as a substrate. We show here that the presence of maltose increases glucose utilization by raising the expression of ptsG, which encodes the glucose-specific EII permease of the phosphotransferase system. Consequently, the L-valine productivity of a pyruvate dehydrogenase complex-deficient C. glutamicum strain was improved by the presence of maltose.


Asunto(s)
Corynebacterium glutamicum/metabolismo , Glucosa/metabolismo , Maltosa/metabolismo , Valina/biosíntesis , Proteínas Bacterianas/biosíntesis , Corynebacterium glutamicum/crecimiento & desarrollo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Complejo Piruvato Deshidrogenasa/genética
7.
J Biol Chem ; 284(52): 36670-36679, 2009 Dec 25.
Artículo en Inglés | MEDLINE | ID: mdl-19840941

RESUMEN

Many bacteria express phosphoenolpyruvate-dependent phosphotransferase systems (PTS). The mannitol-specific PTS catalyze the uptake and phosphorylation of d-mannitol. The uptake system comprises several genes encoded in the single operon. The expression of the mannitol operon is regulated by a proposed transcriptional factor, mannitol operon repressor (MtlR) that was first studied in Escherichia coli. Here we report the first crystal structures of MtlR from Vibrio parahemeolyticus (Vp-MtlR) and its homolog YggD protein from Shigella flexneri (Sf-YggD). MtlR and YggD belong to the same protein family (Pfam05068). Although Vp-MtlR and Sf-YggD share low sequence identity (22%), their overall structures are very similar, representing a novel all alpha-helical fold, and indicate similar function. However, their lack of any known DNA-binding structural motifs and their unfavorable electrostatic properties imply that MtlR/YggD are unlikely to bind a specific DNA operator directly as proposed earlier. This structural observation is further corroborated by in vitro DNA-binding studies of E. coli MtlR (Ec-MtlR), which detected no interaction of Ec-MtlR with the well characterized mannitol operator/promoter region. Therefore, MtlR/YggD belongs to a new class of transcription factors in bacteria that may regulate gene expression indirectly as a part of a larger transcriptional complex.


Asunto(s)
Proteínas Bacterianas/química , Proteínas Represoras/química , Vibrio parahaemolyticus/química , Secuencias de Aminoácidos/fisiología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Cristalografía por Rayos X , Escherichia coli/genética , Regulación Bacteriana de la Expresión Génica/fisiología , Operón/fisiología , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/química , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Proteínas Represoras/genética , Proteínas Represoras/metabolismo , Shigella flexneri/genética , Shigella flexneri/metabolismo , Homología Estructural de Proteína , Vibrio parahaemolyticus/genética , Vibrio parahaemolyticus/metabolismo
8.
J Biol Chem ; 279(37): 38513-8, 2004 Sep 10.
Artículo en Inglés | MEDLINE | ID: mdl-15252051

RESUMEN

Because the phosphoenolpyruvate:sugar phosphotransferase system plays multiple regulatory roles in addition to the phosphorylation-coupled transport of many sugars in bacteria, synthesis of its protein components is regulated in a highly sophisticated way. Thus far, the cAMP receptor protein (CRP) complex and Mlc are known to be the major regulators of ptsHIcrr and ptsG expression in response to the availability of carbon sources. In this report, we performed ligand fishing experiments by using the promoters of ptsHIcrr and ptsG as bait to find out new factors involved in the transcriptional regulation of the phosphoenolpyruvate:sugar phosphotransferase system in Escherichia coli, and we found that the anaerobic regulator ArcA specifically binds to the promoters. Deletion of the arcA gene caused about a 2-fold increase in the ptsG expression, and overexpression of ArcA significantly decreased glucose consumption. In vitro transcription assays showed that phospho-ArcA (ArcA-P) represses ptsG P1 transcription. DNase I footprinting experiments revealed that ArcA-P binds to three sites upstream of the ptsG P1 promoter, two of which overlap the CRP-binding sites, and the ArcA-P binding decreases the CRP binding that is essential for the ptsG P1 transcription. These results suggest that the response regulator ArcA regulates expression of enzyme IICB(Glc) mediating the first step of glucose metabolism in response to the redox conditions of growth in E. coli.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa/metabolismo , Escherichia coli/metabolismo , Glucosa/metabolismo , Proteínas de Transporte de Monosacáridos/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Proteínas Represoras/metabolismo , Secuencia de Bases , Sitios de Unión , Transporte Biológico , AMP Cíclico/metabolismo , Desoxirribonucleasa I/metabolismo , Proteínas de Escherichia coli , Eliminación de Gen , Genotipo , Operón Lac , Ligandos , Datos de Secuencia Molecular , Fenotipo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/química , Fosforilación , Plásmidos/metabolismo , Regiones Promotoras Genéticas , Unión Proteica , Transcripción Genética , beta-Galactosidasa/metabolismo
9.
J Bacteriol ; 186(14): 4543-55, 2004 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-15231787

RESUMEN

A proteome analysis of Lactobacillus casei mutants that are affected in carbon catabolite repression revealed that a 15-kDa protein was strongly overproduced in a ptsHI47T mutant. This protein was identified as EIIA of a mannose class phosphotransferase system (PTS). A 7.1-kb DNA fragment containing the EIIA-encoding open reading frame and five other genes was sequenced. The first gene encodes a protein resembling the RpoN (sigma54)-dependent Bacillus subtilis transcription activator LevR. The following pentacistronic operon is oriented in the opposite direction and encodes four proteins with strong similarity to the proteins of the B. subtilis Lev-PTS and one protein of unknown function. The genes present on the 7.1-kb DNA fragment were therefore called levR and levABCDX. The levABCDX operon was induced by fructose and mannose. No "-12, -24" promoter typical of RpoN-dependent genes precedes the L. casei lev operon, and its expression was therefore RpoN independent but required LevR. Phosphorylation of LevR by P approximately His-HPr stimulates its activity, while phosphorylation by P approximately EIIBLev inhibits it. Disruption of the EIIBLev-encoding levB gene therefore led to strong constitutive expression of the lev operon, which was weaker in a strain carrying a ptsI mutation preventing phosphorylation by both P approximately EIIBLev and P approximately His-HPr. Expression of the L. casei lev operon is also subject to P-Ser-HPr-mediated catabolite repression. The observed slow phosphoenolpyruvate- and ATP-dependent phosphorylation of HPrI47T as well as the slow phosphoryl group transfer from the mutant P approximately His-HPr to EIIALev are assumed to be responsible for the elevated expression of the lev operon in the ptsHI47T mutant.


Asunto(s)
Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Proteínas de Unión al ADN , Regulación Bacteriana de la Expresión Génica , Lacticaseibacillus casei/genética , Mutación , Operón , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/metabolismo , Secuencia de Aminoácidos , Sustitución de Aminoácidos , ADN Bacteriano/química , ADN Bacteriano/aislamiento & purificación , ARN Polimerasas Dirigidas por ADN/metabolismo , Fructosa/metabolismo , Fructosa/farmacología , Eliminación de Gen , Genes Bacterianos , Lacticaseibacillus casei/metabolismo , Manosa/metabolismo , Manosa/farmacología , Datos de Secuencia Molecular , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Fosforilación , Regiones Promotoras Genéticas , ARN Polimerasa Sigma 54 , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido , Factor sigma/metabolismo , Factores de Transcripción/genética
10.
Res Microbiol ; 155(3): 211-5, 2004 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-15059634

RESUMEN

The ptsG gene encodes the high-affinity glucose receptor component of the PEP:glucose phosphotransferase system. PtsG is the major glucose transporter in Escherichia coli under glucose-excess conditions but its regulation under glucose limitation or anaerobiosis is poorly defined. Using a ptsG-lacZ transcriptional fusion, ptsG expression was found to peak with low (micromolar) external glucose levels in glucose-limited chemostats, so PtsG is primed to contribute to glucose scavenging under hunger response conditions. This regulatory pattern was confirmed using methyl- alpha-glucoside transport assays of PtsG-dependent transport. The regulation of ptsG by cAMP contributed to the optimal expression with micromolar glucose but ptsG was actually repressed to levels below that in glucose-excess batch cultures at very slow growth rates and submicromolar glucose concentrations. RpoS contributed to repression of ptsG in slow-growing bacteria but not under glucose-excess conditions. Also, Mlc increasingly contributed to the repression of ptsG at residual glucose concentrations too low to saturate PtsG. A similar pattern of ptsG regulation was observed in anaerobic cultures with either glucose-excess or glucose-limiting situations.


Asunto(s)
Proteínas Bacterianas/metabolismo , AMP Cíclico/metabolismo , Proteínas de Escherichia coli , Escherichia coli/metabolismo , Regulación Bacteriana de la Expresión Génica/fisiología , Proteínas de Transporte de Monosacáridos/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Proteínas Represoras/metabolismo , Factor sigma/metabolismo , Anaerobiosis , Transporte Biológico , Reactores Biológicos , Escherichia coli/genética , Glucosa/metabolismo , Metilglucósidos/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética
11.
J Biol Chem ; 278(17): 14776-81, 2003 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-12588863

RESUMEN

Transcription of ptsG encoding glucose-specific permease, enzyme IICB(Glc), in Escherichia coli is initiated from two promoters, P1 and P2. ptsG transcription is repressed by Mlc, a glucose-inducible regulator of carbohydrate metabolism. The regulation of ptsG P1 transcription is also under positive control by cyclic AMP receptor protein and cyclic AMP complex (CRP.cAMP) as observed in other Mlc regulon. We report here that Fis, one of the nucleoid-associated proteins, plays a key role in glucose induction of Mlc regulon. ptsG transcription was induced when wild-type cells were grown in the presence of glucose. However, in a fis mutant, the basal level of ptsG transcription was higher but decreased when cells were grown in the presence of glucose, which implies the possibility of regulatory interactions among Fis, Mlc, and CRP.cAMP. Footprinting experiments with various probes and transcription assays revealed that Fis assists both Mlc repression and CRP.cAMP activation of ptsG P1 through the formation of Fis.CRP.Mlc or Fis.CRP nucleoprotein complexes at ptsG P1 promoter depending on the availability of glucose in the growth medium. ptsG P2 transcription was inhibited by Fis and Mlc. Tighter Mlc repression and enhanced CRP.cAMP activation of ptsG P1 by Fis enable cells to regulate Mlc regulon efficiently by selectively controlling the concentration of enzyme IICB(Glc) that modulates Mlc activity.


Asunto(s)
Factor Proteico para Inverción de Estimulación/fisiología , Regulación de la Expresión Génica , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , AMP Cíclico/metabolismo , Proteína Receptora de AMP Cíclico/metabolismo , Proteína Receptora de AMP Cíclico/fisiología , ARN Polimerasas Dirigidas por ADN/metabolismo , Proteínas de Escherichia coli/biosíntesis , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Factor Proteico para Inverción de Estimulación/metabolismo , Genes Reguladores , Glucosa/farmacología , Nucleoproteínas/biosíntesis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Regiones Promotoras Genéticas , Unión Proteica , Proteínas Represoras/metabolismo , Proteínas Represoras/fisiología , Transcripción Genética
12.
Appl Environ Microbiol ; 68(11): 5554-62, 2002 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-12406749

RESUMEN

Dissolved free and combined N-acetyl-D-glucosamine (NAG) is among the largest pools of amino sugars in the ocean. NAG is a main structural component in chitin and a substantial constituent of bacterial peptidoglycan and lipopolysaccharides. We studied the distribution and kinetics of NAG uptake by the phosphoenolpyruvate:NAG phosphotransferase systems (PTS) in marine bacterial isolates and natural bacterial assemblages in near-shore waters. Of 78 bacterial isolates examined, 60 took up 3H-NAG, while 18 showed no uptake. No systematic pattern in NAG uptake capability relative to phylogenetic affiliation was found, except that all isolates within Vibrionaceae took up NAG. Among 12 isolates, some showed large differences in the relationship between polymer hydrolysis (measured as chitobiase activity) and uptake of the NAG, the hydrolysis product. Pool turnover time and estimated maximum ambient concentration of dissolved NAG in samples off Scripps Pier (La Jolla, Calif.) were 5.9 +/- 3.0 days (n = 10) and 5.2 +/- 0.9 nM (n = 3), respectively. Carbohydrate competition experiments indicated that glucose, glucosamine, mannose, and fructose were taken up by the same system as NAG. Sensitivity to the antibiotic and NAG structural analog streptozotocin (STZ) was developed into a culture-independent approach, which demonstrated that approximately one-third of bacteria in natural marine assemblages that were synthesizing DNA took up NAG. Isolates possessing a NAG PTS system were found to be predominantly facultative anaerobes. These results suggest the hypothesis that a substantial fraction of bacteria in natural pelagic assemblages are facultative anaerobes. The adaptive value of fermentative metabolism in the pelagic environment is potentially significant, e.g., to bacteria colonizing microenvironments such as marine snow that may experience periodic O2-limitation.


Asunto(s)
Acetilglucosamina/metabolismo , Bacterias/enzimología , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Microbiología del Agua , Acetilglucosaminidasa/análisis , Acetilglucosaminidasa/biosíntesis , Anaerobiosis , Bacterias/clasificación , Bacterias/efectos de los fármacos , Bacterias/metabolismo , Transporte Biológico , División Celular/efectos de los fármacos , Ecología , Hidrólisis , Cinética , Biología Marina , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/análisis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Filogenia , Estreptozocina/farmacología , Especificidad por Sustrato
13.
J Bacteriol ; 184(11): 3044-52, 2002 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-12003946

RESUMEN

The formation of glycerol-3-phosphate (G3P) in cells growing on TB causes catabolite repression, as shown by the reduction in malT expression. For this repression to occur, the general proteins of the phosphoenolpyruvate-dependent phosphotransferase system (PTS), in particular EIIA(Glc), as well as the adenylate cyclase and the cyclic AMP-catabolite activator protein system, have to be present. We followed the level of EIIA(Glc) phosphorylation after the addition of glycerol or G3P. In contrast to glucose, which causes a dramatic shift to the dephosphorylated form, glycerol or G3P only slightly increased the amount of dephosphorylated EIIA(Glc). Isopropyl-beta-D-thiogalactopyranoside-induced overexpression of EIIA(Glc) did not prevent repression by G3P, excluding the possibility that G3P-mediated catabolite repression is due to the formation of unphosphorylated EIIA(Glc). A mutant carrying a C-terminally truncated adenylate cyclase was no longer subject to G3P-mediated repression. We conclude that the stimulation of adenylate cyclase by phosphorylated EIIA(Glc) is controlled by G3P and other phosphorylated sugars such as D-glucose-6-phosphate and is the basis for catabolite repression by non-PTS compounds. Further metabolism of these compounds is not necessary for repression. Two-dimensional polyacrylamide gel electrophoresis was used to obtain an overview of proteins that are subject to catabolite repression by glycerol. Some of the prominently repressed proteins were identified by peptide mass fingerprinting. Among these were periplasmic binding proteins (glutamine and oligopeptide binding protein, for example), enzymes of the tricarboxylic acid cycle, aldehyde dehydrogenase, Dps (a stress-induced DNA binding protein), and D-tagatose-1,6-bisphosphate aldolase.


Asunto(s)
Proteínas de Unión al ADN , Proteínas de Escherichia coli , Escherichia coli/efectos de los fármacos , Glicerofosfatos , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Adenilil Ciclasas/biosíntesis , Proteínas Bacterianas/análisis , Proteínas Bacterianas/biosíntesis , Proteínas Bacterianas/metabolismo , Regulación hacia Abajo , Electroforesis en Gel Bidimensional , Inducción Enzimática/efectos de los fármacos , Escherichia coli/crecimiento & desarrollo , Escherichia coli/metabolismo , Glicerol/farmacología , Glicerofosfatos/farmacología , Operón Lac , Mutación , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/análisis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/antagonistas & inhibidores , Factores de Transcripción/metabolismo
14.
EMBO Rep ; 2(8): 709-14, 2001 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-11463745

RESUMEN

Like its mitochondrial homolog Oxa1p, the inner membrane protein YidC of Escherichia coli is involved in the integration of membrane proteins. We have analyzed individual insertion steps of the polytopic E. coli membrane protein MtlA targeted as ribosome-nascent chain complexes to inner membrane vesicles. YidC can accommodate at least the first two transmembrane segments of MtlA at the protein lipid interface and retain them even though the length of the nascent chain would amply allow insertion into membrane lipids. An even longer insertion intermediate of MtlA is described that still has the first transmembrane helix bound to YidC while the third contacts SecE and YidC during integration. Our findings suggest that YidC forms a contiguous integration unit with the SecYE translocon and functions as an assembly site for polytopic membrane proteins mediating the formation of helix bundles prior to their release into the membrane lipids.


Asunto(s)
Proteínas Bacterianas/metabolismo , Proteínas de Escherichia coli , Escherichia coli/fisiología , Proteínas de la Membrana/biosíntesis , Proteínas de Transporte de Membrana , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Lípidos de la Membrana/metabolismo , Proteínas de la Membrana/química , Proteínas de Transporte de Monosacáridos , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/química , Biosíntesis de Proteínas
15.
Electrophoresis ; 21(13): 2660-9, 2000 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-10949143

RESUMEN

The proteomes of exponentially growing and stationary cells of Lactobacillus delbrueckii ssp. bulgaricus grown in rich medium (MRS) were separated by two-dimensional polyacrylamide gel electrophoresis (2-DE) and quantified after Coomassie staining. Stationary cells grown in MRS were inoculated in reconstituted skim milk, and "early" protein synthesis during the first 30 min of fermentation in milk was monitored by [35S]methionine labeling and 2-DE. In contrast to exponentially growing or stationary cells, the predominant "early" proteins were small (< 15 kDa) and of low pI (< 5.3). Quantification of the proteome of the "early" lag phase based on 47 "spots" revealed that only three "early" proteins accounted for more than 80% of the total label. They were identified as pI 4.7 and 4.9 isoforms of the heat-stable phosphoryl carrier protein (HPr) with 45.2 and 9.4% of total label, respectively, and an unknown protein called EPr1 ("early" protein 1) with 26.6% of total label. Although an N-terminal sequence of 19 amino acids was obtained, no homologs to EPr1 could be found. De novo synthesis of the 10 and 60 kDa heat shock proteins (GroES and GroEL) was considerably lower (0.04 and 0.9% of total label, respectively), indicating only low levels of stress. Synthesis of triosephosphate isomerase (Tpi) as marker for glycolytic enzymes reached only 0.08% of total label. Our results demonstrate that inoculation in milk, resulting in a change from glucose to lactose as carbon source, imposes only little need for synthesis of stress or glycolytic enzymes, as sufficient proteins are present in the stationary, MRS-grown cells. The high level of expression of the pI 4.7 isoform of HPr suggests a regulatory function of the presumed Ser-46 phosphorylated form of HPr.


Asunto(s)
Proteínas Bacterianas/biosíntesis , Electroforesis en Gel Bidimensional , Regulación Bacteriana de la Expresión Génica , Lactobacillus/metabolismo , Leche/microbiología , Triosa-Fosfato Isomerasa/análisis , Triosa-Fosfato Isomerasa/biosíntesis , Triosa-Fosfato Isomerasa/genética , Secuencia de Aminoácidos , Animales , Proteínas Bacterianas/análisis , Proteínas Bacterianas/genética , Bovinos , Chaperonina 10/análisis , Chaperonina 10/biosíntesis , Chaperonina 10/genética , Chaperonina 60/análisis , Chaperonina 60/biosíntesis , Chaperonina 60/genética , Colorantes , Medios de Cultivo/farmacología , Perfilación de la Expresión Génica , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Procesamiento de Imagen Asistido por Computador , Lactobacillus/efectos de los fármacos , Lactobacillus/ultraestructura , Espectrometría de Masas , Datos de Secuencia Molecular , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/análisis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Isoformas de Proteínas/análisis , Isoformas de Proteínas/biosíntesis , Isoformas de Proteínas/genética , Proteoma , ARN Bacteriano/biosíntesis , ARN Mensajero/biosíntesis , Colorantes de Rosanilina , Alineación de Secuencia , Análisis de Secuencia de Proteína , Tinción con Nitrato de Plata , Coloración y Etiquetado/métodos , Factores de Tiempo
16.
J Biol Chem ; 274(36): 25398-402, 1999 Sep 03.
Artículo en Inglés | MEDLINE | ID: mdl-10464268

RESUMEN

Products of the pts operon of Escherichia coli have multiple physiological roles such as sugar transport, and the operon is controlled by two promoters, P0 and P1. Expression of the pts P0 promoter that is increased during growth in the presence of glucose is also activated by cAMP receptor protein.cAMP. Based on the existence of a sequence that has a high similarity with the known Mlc binding site in the promoter, the effects of the Mlc protein on the pts P0 promoter expression were studied. In vivo transcription assays using wild type and mlc-negative E. coli strains grown in the presence and absence of glucose indicate that Mlc negatively regulates expression of the P0 promoter, and Mlc-dependent repression is relieved by glucose in the growth medium. In vitro transcription assay using purified recombinant Mlc showed that Mlc repressed transcription from the P0 but did not affect the activity of the P1. DNase I footprinting experiments revealed that a Mlc binding site was located around +1 to +25 of the promoter and that Mlc inhibited the binding of RNA polymerase to the P0 promoter. Cells overexpressing Mlc showed a very slow fermentation rate compared with the wild type when grown in the presence of various phosphoenolpyruvate-carbohydrate phosphotransferase system sugars but few differences in the presence of non-phosphoenolpyruvate-carbohydrate phosphotransferase system sugars except maltose. These results suggest that the pts operon is one of major targets for the negative regulation by Mlc, and thus Mlc regulates the utilization of various sugars as well as glucose in E. coli. The possibility that the inducer of Mlc may not be sugar or its derivative but an unknown factor is proposed to explain the Mlc induction mechanism by various sugars.


Asunto(s)
Proteínas de Escherichia coli , Regulación Bacteriana de la Expresión Génica , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Proteínas Represoras/genética , Proteínas Represoras/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Escherichia coli , Datos de Secuencia Molecular , Regiones Promotoras Genéticas
17.
J Bacteriol ; 181(10): 3018-24, 1999 May.
Artículo en Inglés | MEDLINE | ID: mdl-10322001

RESUMEN

The Hha protein belongs to a new family of regulators involved in the environmental regulation of virulence factors. The aim of this work was to study the effect of the hha mutation on the overall protein pattern of Escherichia coli cells by two-dimensional polyacrylamide gel electrophoresis. The growth medium osmolarity clearly influenced the effect of the hha mutation. The number of proteins whose expression was altered in hha cells, compared with wild-type cells, was three times larger at a high osmolarity than at a low osmolarity. Among the proteins whose expression was modified by the hha allele, both OmpA and protein IIAGlc of the phosphotransferase system could be identified. As this latter enzyme participates in the regulation of the synthesis of cyclic AMP and hence influences the catabolite repression system, we tested whether the expression of the lacZ gene was also modified in hha mutants. This was the case, suggesting that at least some of the pleiotropic effects of the hha mutation could be caused by its effect on the catabolite repression system.


Asunto(s)
Proteínas Bacterianas/biosíntesis , Proteínas Bacterianas/fisiología , Proteínas de Unión al ADN , Proteínas de Escherichia coli , Escherichia coli/metabolismo , Regulación Bacteriana de la Expresión Génica , Mutación , Alelos , Proteínas de la Membrana Bacteriana Externa/biosíntesis , Proteínas de la Membrana Bacteriana Externa/genética , Proteínas Bacterianas/genética , Western Blotting , Medios de Cultivo , AMP Cíclico/fisiología , Electroforesis en Gel Bidimensional , Inducción Enzimática/efectos de los fármacos , Represión Enzimática/efectos de los fármacos , Escherichia coli/enzimología , Escherichia coli/genética , Escherichia coli/crecimiento & desarrollo , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Glucosa/metabolismo , Operón Lac/genética , Concentración Osmolar , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Cloruro de Sodio/farmacología , beta-Galactosidasa/biosíntesis , beta-Galactosidasa/genética
18.
Res Microbiol ; 149(5): 319-26, 1998 May.
Artículo en Inglés | MEDLINE | ID: mdl-9766232

RESUMEN

An endoglucanase, CelA, is secreted by Myxococcus xanthus only during exponential growth. The production of this enzyme is decreased by mutations in 5 different genes (Exc +/- phenotype), three of which correspond to asg genes which regulate the production of an early cell-to-cell signal in development. Transcription of celA is decreased in two of these Exc +/- mutants, whereas a post-transcriptional step is affected in two other Exc- mutants. Thus, asg genes, in addition to regulating the onset of development, also regulate a gene (celA) that is expressed during exponential growth and that is not involved in development.


Asunto(s)
Celulasa/genética , Regulación Bacteriana de la Expresión Génica , Regulación del Desarrollo de la Expresión Génica , Regulación Enzimológica de la Expresión Génica , Myxococcus xanthus/genética , Fosfotransferasas , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Secuencia de Bases , Northern Blotting , Caseínas/química , Celulasa/biosíntesis , Electroforesis , Datos de Secuencia Molecular , Myxococcus xanthus/crecimiento & desarrollo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , ARN/química , ARN Mensajero/biosíntesis , Análisis de Secuencia de ADN , Transducción de Señal , Transcripción Genética/genética
19.
J Bacteriol ; 178(19): 5586-91, 1996 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-8824601

RESUMEN

A mannitol phosphotransferase system (PTS) was identified in Bacillus stearothermophilus by in vitro complementation with Escherichia coli EI, HPr, and IIA(Mtl). Degenerate primers based on regions of high amino acid similarity in the E. coli and Staphylococcus carnosus EII(Mt1) were used to develop a digoxigenin-labeled probe by PCR. Using this probe, we isolated three overlapping DNA fragments totaling 7.2 kb which contain the genes mtlA, mtlR, mtlF, and mtlD, encoding the mannitol IICB,a regulator, IIA, and a mannitol-1-phosphate dehydrogenase, respectively. The mtl4 gene consists of 1,413 bp coding for a 471-amino-acid protein with a calculated mass of 50.1 kDa. The amino acid sequence shows high similarity with the sequence of IICB(Mtl) of S. carnosus and the IICB part of the IICBA(Mtl)s of E. coli and B. subtilis. The enzyme could be functionally expressed in E. coli by placing it behind the strong tac promoter. The rate of thermal inactivation at 60 degrees C of B. stearothermophilus HCB(Mt1) expressed in E. coli was two times lower than that of E. coli IICB(Mtl). IICB(Mtl) in B. stearothermophilus is maximally active at 85 degrees C and thus very thermostable. The enzyme was purified on Ni-nitrilotriacetic acid resin to greater than 95% purity after six histidines were fused to the C-terminal part of the transporter.


Asunto(s)
Geobacillus stearothermophilus/genética , Manitol/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Secuencia de Aminoácidos , Transporte Biológico , Clonación Molecular , Proteínas de Escherichia coli , Geobacillus stearothermophilus/metabolismo , Calor , Datos de Secuencia Molecular , Proteínas de Transporte de Monosacáridos , Operón , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido
20.
Proc Natl Acad Sci U S A ; 93(14): 7028-31, 1996 Jul 09.
Artículo en Inglés | MEDLINE | ID: mdl-8692938

RESUMEN

The bacterial phosphoenolpyruvate/glycose phosphotransferase system (PTS) comprises a group of proteins that catalyze the transfer of the phosphoryl group from phosphoenolpyruvate (PEP) to sugars concomitant with their translocation. The first two steps of the phosphotransfer sequence are PEP <--> Enzyme I (EI) <--> HPr (the histidine-containing phosphocarrier protein). We have proposed that many functions of the PTS are regulated by EI, which undergoes a monomer/dimer transition. EI monomer (63.5 kDa) comprises two major domains: a flexible C-terminal domain (EI-C) and a protease-resistant, structurally stable N-terminal domain (EI-N) containing the active site His. Trypsin treatment of Salmonella typhimurium EI yielded EI-N, designated EI-N(t). Homogeneous recombinant Escherichia coli EI-N [i.e., EI-N(r)], has now been prepared in quantity, shows the expected thermodynamic unfolding properties and, similarly to EI-N(t), is phosphorylated by phospho-HPr, but not by PEP. In addition, binding of EI-N(r) to HPr was studied by isothermal titration calorimetry: K/a = 1.4 x 10(5) M(-1) and delta H = +8.8 kcal x mol(-1). Both values are comparable to those for HPr binding to intact EI. Fluorescence anisotropy [dansyl-EI-N(r)] and gel filtration of EI-N(r) show that it does not dimerize. These results emphasize the role of EI-C in dimerization and the regulation of intact EI.


Asunto(s)
Proteínas Bacterianas , Escherichia coli/enzimología , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/química , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/metabolismo , Fosfotransferasas (Aceptor del Grupo Nitrogenado)/química , Fosfotransferasas (Aceptor del Grupo Nitrogenado)/metabolismo , Secuencia de Bases , Calorimetría , Clonación Molecular , Estabilidad de Enzimas , Datos de Secuencia Molecular , Oligodesoxirribonucleótidos , Fragmentos de Péptidos/química , Fragmentos de Péptidos/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/biosíntesis , Fosforilación , Fosfotransferasas (Aceptor del Grupo Nitrogenado)/biosíntesis , Plásmidos , Unión Proteica , Pliegue de Proteína , Estructura Terciaria de Proteína , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Salmonella typhimurium/enzimología , Espectrometría de Fluorescencia , Espectroscopía Infrarroja por Transformada de Fourier
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