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1.
Brain Res Bull ; 194: 118-123, 2023 03.
Article En | MEDLINE | ID: mdl-36720320

Plasmalogens are a unique family of cellular glycerophospholipids that contain a vinyl-ether bond. Synthesis of plasmalogens is initiated in peroxisomes and completed in the endoplasmic reticulum. The absence of plasmalogens in several organs of patients with deficiency in peroxisome biogenesis suggests that de novo synthesis of plasmalogens contributes significantly to plasmalogen homeostasis in humans. Plasmalogen biosynthesis is spatiotemporally regulated by a feedback mechanism that senses the amount of plasmalogens in the inner leaflet of the plasma membrane and regulates the stability of fatty acyl-CoA reductase 1 (FAR1), the rate-limiting enzyme for plasmalogen biosynthesis. Dysregulation of plasmalogen synthesis impairs cholesterol synthesis in cells and brain, resulting in the reduced expression of genes such as mRNA encoding myelin basic protein, a phenotype found in the cerebellum of plasmalogen-deficient mice. In this review, we summarize the current knowledge of molecular mechanisms underlying the regulation of plasmalogen biosynthesis and the link between plasmalogen homeostasis and cholesterol biosynthesis, and address the pathogenesis of impaired plasmalogen homeostasis in rodent and humans.


Cholesterol , Plasmalogens , Humans , Animals , Mice , Plasmalogens/genetics , Plasmalogens/metabolism , Homeostasis , Mammals/metabolism
2.
Gastroenterology ; 162(3): 828-843.e11, 2022 03.
Article En | MEDLINE | ID: mdl-34780722

BACKGROUND & AIMS: Polygenic and environmental factors are underlying causes of inflammatory bowel disease (IBD). We hypothesized that integration of the genetic loci controlling a metabolite's abundance, with known IBD genetic susceptibility loci, may help resolve metabolic drivers of IBD. METHODS: We measured the levels of 1300 metabolites in the serum of 484 patients with ulcerative colitis (UC) and 464 patients with Crohn's disease (CD) and 365 controls. Differential metabolite abundance was determined for disease status, subtype, clinical and endoscopic disease activity, as well as IBD phenotype including disease behavior, location, and extent. To inform on the genetic basis underlying metabolic diversity, we integrated metabolite and genomic data. Genetic colocalization and Mendelian randomization analyses were performed using known IBD risk loci to explore whether any metabolite was causally associated with IBD. RESULTS: We found 173 genetically controlled metabolites (metabolite quantitative trait loci, 9 novel) within 63 non-overlapping loci (7 novel). Furthermore, several metabolites significantly associated with IBD disease status and activity as defined using clinical and endoscopic indexes. This constitutes a resource for biomarker discovery and IBD biology insights. Using this resource, we show that a novel metabolite quantitative trait locus for serum butyrate levels containing ACADS was not supported as causal for IBD; replicate the association of serum omega-6 containing lipids with the fatty acid desaturase 1/2 locus and identify these metabolites as causal for CD through Mendelian randomization; and validate a novel association of serum plasmalogen and TMEM229B, which was predicted as causal for CD. CONCLUSIONS: An exploratory analysis combining genetics and unbiased serum metabolome surveys can reveal novel biomarkers of disease activity and potential mediators of pathology in IBD.


Acyl-CoA Dehydrogenase/genetics , Colitis, Ulcerative/genetics , Colitis, Ulcerative/metabolism , Crohn Disease/genetics , Crohn Disease/metabolism , Adolescent , Adult , Aged , Aged, 80 and over , Biomarkers/blood , Butyrates/blood , Case-Control Studies , Child , Child, Preschool , Colitis, Ulcerative/blood , Colitis, Ulcerative/drug therapy , Crohn Disease/blood , Crohn Disease/drug therapy , Cross-Sectional Studies , Feces/chemistry , Female , Genome-Wide Association Study , Genotype , HEK293 Cells , Humans , Male , Mendelian Randomization Analysis , Metabolome , Middle Aged , Plasmalogens/blood , Plasmalogens/genetics , Quantitative Trait Loci , Severity of Illness Index , Young Adult
3.
Proc Natl Acad Sci U S A ; 117(14): 7792-7798, 2020 04 07.
Article En | MEDLINE | ID: mdl-32209662

A significant fraction of the glycerophospholipids in the human body is composed of plasmalogens, particularly in the brain, cardiac, and immune cell membranes. A decline in these lipids has been observed in such diseases as Alzheimer's and chronic obstructive pulmonary disease. Plasmalogens contain a characteristic 1-O-alk-1'-enyl ether (vinyl ether) double bond that confers special biophysical, biochemical, and chemical properties to these lipids. However, the genetics of their biosynthesis is not fully understood, since no gene has been identified that encodes plasmanylethanolamine desaturase (E.C. 1.14.99.19), the enzyme introducing the crucial alk-1'-enyl ether double bond. The present work identifies this gene as transmembrane protein 189 (TMEM189). Inactivation of the TMEM189 gene in human HAP1 cells led to a total loss of plasmanylethanolamine desaturase activity, strongly decreased plasmalogen levels, and accumulation of plasmanylethanolamine substrates and resulted in an inability of these cells to form labeled plasmalogens from labeled alkylglycerols. Transient expression of TMEM189 protein, but not of other selected desaturases, recovered this deficit. TMEM189 proteins contain a conserved protein motif (pfam10520) with eight conserved histidines that is shared by an alternative type of plant desaturase but not by other mammalian proteins. Each of these histidines is essential for plasmanylethanolamine desaturase activity. Mice homozygous for an inactivated Tmem189 gene lacked plasmanylethanolamine desaturase activity and had dramatically lowered plasmalogen levels in their tissues. These results assign the TMEM189 gene to plasmanylethanolamine desaturase and suggest that the previously characterized phenotype of Tmem189-deficient mice may be caused by a lack of plasmalogens.


Lipids/genetics , Oxidoreductases/genetics , Plasmalogens/genetics , Ubiquitin-Conjugating Enzymes/genetics , Alzheimer Disease/genetics , Alzheimer Disease/metabolism , Alzheimer Disease/pathology , Animals , Cell Line , Humans , Mice , Oxidation-Reduction , Oxidoreductases/metabolism , Phenotype , Plasmalogens/metabolism , Ubiquitin-Conjugating Enzymes/metabolism , Vinyl Compounds/metabolism
4.
J Biol Chem ; 295(13): 4124-4133, 2020 03 27.
Article En | MEDLINE | ID: mdl-32221031

An early exposure to lipid biochemistry in the laboratory of Konrad Bloch resulted in a fascination with the biosynthesis, structures, and functions of bacterial lipids. The discovery of plasmalogens (1-alk-1'-enyl, 2-acyl phospholipids) in anaerobic Gram-positive bacteria led to studies on the physical chemistry of these lipids and the cellular regulation of membrane lipid polymorphism in bacteria. Later studies in several laboratories showed that the formation of the alk-1-enyl ether bond involves an aerobic process in animal cells and thus is fundamentally different from that in anaerobic organisms. Our work provides evidence for an anaerobic process in which plasmalogens are formed from their corresponding diacyl lipids. Studies on the roles of phospholipases in Listeria monocytogenes revealed distinctions between its phospholipases and those previously discovered in other bacteria and showed how the Listeria enzymes are uniquely fitted to the intracellular lifestyle of this significant human pathogen.


Anaerobiosis/genetics , Lipids/genetics , Plasmalogens/metabolism , Bacteria, Anaerobic/genetics , Bacteria, Anaerobic/metabolism , Fatty Acids/biosynthesis , Fatty Acids/genetics , Fatty Acids/metabolism , Gram-Positive Bacteria/genetics , Gram-Positive Bacteria/metabolism , Lipids/biosynthesis , Lipids/chemistry , Phosphatidylethanolamines/biosynthesis , Phosphatidylethanolamines/genetics , Phosphatidylethanolamines/metabolism , Plasmalogens/chemistry , Plasmalogens/genetics
5.
Biochemistry ; 57(14): 2162-2175, 2018 04 10.
Article En | MEDLINE | ID: mdl-29557170

Tafazzin is the mitochondrial enzyme that catalyzes transacylation between a phospholipid and a lysophospholipid in remodeling. Mutations in tafazzin cause Barth syndrome, a potentially life-threatening disease with the major symptom being cardiomyopathy. In the tafazzin-deficient heart, cardiolipin (CL) acyl chains become abnormally heterogeneous unlike those in the normal heart with a single dominant linoleoyl species, tetralinoleoyl CL. In addition, the amount of CL decreases and monolysocardiolipin (MLCL) accumulates. Here we determine using high-resolution 31P nuclear magnetic resonance with cryoprobe technology the fundamental phospholipid composition, including the major but oxidation-labile plasmalogens, in the tafazzin-knockdown (TAZ-KD) mouse heart as a model of Barth syndrome. In addition to confirming a lower level of CL (6.4 ± 0.1 → 2.0 ± 0.4 mol % of the total phospholipid) and accumulation of MLCL (not detected → 3.3 ± 0.5 mol %) in the TAZ-KD, we found a substantial reduction in the level of plasmenylcholine (30.8 ± 2.8 → 18.1 ± 3.1 mol %), the most abundant phospholipid in the control wild type. A quantitative Western blot revealed that while the level of peroxisomes, where early steps of plasmalogen synthesis take place, was normal in the TAZ-KD model, expression of Far1 as a rate-determining enzyme in plasmalogen synthesis was dramatically upregulated by 8.3 (±1.6)-fold to accelerate the synthesis in response to the reduced level of plasmalogen. We confirmed lyso-plasmenylcholine or plasmenylcholine is a substrate of purified tafazzin for transacylation with CL or MLCL, respectively. Our results suggest that plasmenylcholine, abundant in linoleoyl species, is important in remodeling CL in the heart. Tafazzin deficiency thus has a major impact on the cardiac plasmenylcholine level and thereby its functions.


Barth Syndrome/metabolism , Mitochondria, Heart/metabolism , Mitochondrial Proteins/metabolism , Plasmalogens/biosynthesis , Transcription Factors/deficiency , Acylation , Acyltransferases , Animals , Barth Syndrome/genetics , Barth Syndrome/pathology , Disease Models, Animal , Mice , Mice, Transgenic , Mitochondria, Heart/genetics , Mitochondrial Proteins/genetics , Plasmalogens/genetics , Transcription Factors/metabolism
6.
Biochim Biophys Acta Mol Cell Biol Lipids ; 1863(3): 219-234, 2018 Mar.
Article En | MEDLINE | ID: mdl-29217479

Cardiac myocyte membranes contain lipids which remodel dramatically in response to heart growth and remodeling. Lipid species have both structural and functional roles. Physiological and pathological cardiac remodeling have very distinct phenotypes, and the identification of molecular differences represent avenues for therapeutic interventions. Whether the abundance of specific lipid classes is different in physiological and pathological models was largely unknown. The aim of this study was to determine whether distinct lipids are regulated in settings of physiological and pathological remodeling, and if so, whether modulation of differentially regulated lipids could modulate heart size and function. Lipidomic profiling was performed on cardiac-specific transgenic mice with 1) physiological cardiac hypertrophy due to increased Insulin-like Growth Factor 1 (IGF1) receptor or Phosphoinositide 3-Kinase (PI3K) signaling, 2) small hearts due to depressed PI3K signaling (dnPI3K), and 3) failing hearts due to dilated cardiomyopathy (DCM). In hearts of dnPI3K and DCM mice, several phospholipids (plasmalogens) were decreased and sphingolipids increased compared to mice with physiological hypertrophy. To assess whether restoration of plasmalogens could restore heart size or cardiac function, dnPI3K and DCM mice were administered batyl alcohol (BA; precursor to plasmalogen biosynthesis) in the diet for 16weeks. BA supplementation increased a major plasmalogen species (p18:0) in the heart but had no effect on heart size or function. This may be due to the concurrent reduction in other plasmalogen species (p16:0 and p18:1) with BA. Here we show that lipid species are differentially regulated in settings of physiological and pathological remodeling. Restoration of lipid species in the failing heart warrants further examination.


Cardiomegaly/metabolism , Glyceryl Ethers/pharmacology , Lipid Metabolism/drug effects , Myocardium/metabolism , Plasmalogens/metabolism , Ventricular Remodeling/drug effects , Animals , Cardiomegaly/drug therapy , Cardiomegaly/genetics , Cardiomegaly/pathology , Mice , Mice, Transgenic , Myocardium/pathology , Plasmalogens/genetics , Ventricular Remodeling/genetics
7.
Psychiatry Res ; 246: 803-807, 2016 Dec 30.
Article En | MEDLINE | ID: mdl-27825781

Bipolar I disorder is associated with deficits in the long-chain omega-3 fatty acid docosahexaenoic acid (DHA, 22:6n-3). The final biosynthesis of DHA is mediated by peroxisomes, and some heritable peroxisomal disorders are associated with DHA deficits and progressive psychopathology. The present cross-sectional study investigated whether medication-free asymptomatic and symptomatic youth with familial risk for bipolar I disorder exhibit impaired peroxisomal function using a comprehensive diagnostic blood panel. Measures of peroxisomal impairment included plasma concentrations of very long-chain fatty acids (VLCFA), branched-chain fatty acids, bile acid intermediates, and pipecolic acid, and erythrocyte plasmalogen and DHA levels. Compared with healthy subjects, significant erythrocyte DHA deficits were observed in ultra-high risk and first-episode bipolar groups, and there was a trend for lower DHA in the high-risk group. There were no significant group differences for any other measure of peroxisomal function, and erythrocyte DHA levels were not correlated with any measure of peroxisome function. These results indicate that familial risk for bipolar I disorder is not associated with impaired peroxisomal function, and that DHA deficits associated with familial bipolar disorder are not attributed to heritable defects in peroxisomal function.


Bipolar Disorder/blood , Docosahexaenoic Acids/blood , Docosahexaenoic Acids/deficiency , Peroxisomes/metabolism , Adolescent , Biomarkers/blood , Bipolar Disorder/diagnosis , Bipolar Disorder/genetics , Child , Cross-Sectional Studies , Docosahexaenoic Acids/genetics , Fatty Acids, Omega-3/blood , Fatty Acids, Omega-3/deficiency , Fatty Acids, Omega-3/genetics , Female , Humans , Male , Peroxisomes/genetics , Plasmalogens/blood , Plasmalogens/genetics , Risk Factors , Young Adult
8.
J Biol Chem ; 290(48): 28822-33, 2015 Nov 27.
Article En | MEDLINE | ID: mdl-26463208

Plasmalogen biosynthesis is regulated by modulating fatty acyl-CoA reductase 1 stability in a manner dependent on cellular plasmalogen level. However, physiological significance of the regulation of plasmalogen biosynthesis remains unknown. Here we show that elevation of the cellular plasmalogen level reduces cholesterol biosynthesis without affecting the isoprenylation of proteins such as Rab and Pex19p. Analysis of intermediate metabolites in cholesterol biosynthesis suggests that the first oxidative step in cholesterol biosynthesis catalyzed by squalene monooxygenase (SQLE), an important regulator downstream HMG-CoA reductase in cholesterol synthesis, is reduced by degradation of SQLE upon elevation of cellular plasmalogen level. By contrast, the defect of plasmalogen synthesis causes elevation of SQLE expression, resulting in the reduction of 2,3-epoxysqualene required for cholesterol synthesis, hence implying a novel physiological consequence of the regulation of plasmalogen biosynthesis.


Cholesterol/biosynthesis , Homeostasis/physiology , Plasmalogens/biosynthesis , Animals , CHO Cells , Cholesterol/genetics , Cricetinae , Cricetulus , Gene Expression Regulation, Enzymologic/physiology , HEK293 Cells , HeLa Cells , Humans , Hydroxymethylglutaryl CoA Reductases/biosynthesis , Hydroxymethylglutaryl CoA Reductases/genetics , Membrane Proteins/genetics , Membrane Proteins/metabolism , Plasmalogens/genetics , Protein Prenylation/physiology , Squalene Monooxygenase/biosynthesis , Squalene Monooxygenase/genetics , rab GTP-Binding Proteins/genetics , rab GTP-Binding Proteins/metabolism
9.
J Biol Chem ; 288(48): 34588-98, 2013 Nov 29.
Article En | MEDLINE | ID: mdl-24108123

Peroxisomal fatty acyl-CoA reductase 1 (Far1) is essential for supplying fatty alcohols required for ether bond formation in ether glycerophospholipid synthesis. The stability of Far1 is regulated by a mechanism that is dependent on cellular plasmalogen levels. However, the membrane topology of Far1 and how Far1 is targeted to membranes remain largely unknown. Here, Far1 is shown to be a peroxisomal tail-anchored protein. The hydrophobic C terminus of Far1 binds to Pex19p, a cytosolic receptor harboring a C-terminal CAAX motif, which is responsible for the targeting of Far1 to peroxisomes. Far1, but not Far2, was preferentially degraded in response to the cellular level of plasmalogens. Experiments in which regions of Far1 or Far2 were replaced with the corresponding region of the other protein showed that the region flanking the transmembrane domain of Far1 is required for plasmalogen-dependent modulation of Far1 stability. Expression of Far1 increased plasmalogen synthesis in wild-type Chinese hamster ovary cells, strongly suggesting that Far1 is a rate-limiting enzyme for plasmalogen synthesis.


Aldehyde Oxidoreductases/metabolism , Lipid Metabolism/genetics , Plasmalogens/biosynthesis , Aldehyde Oxidoreductases/genetics , Animals , CHO Cells , Cricetinae , Cricetulus , Gene Expression Regulation , Homeostasis , Humans , MCF-7 Cells , Peroxisomes/metabolism , Plasmalogens/genetics , Plasmalogens/metabolism , Protein Binding , Protein Stability , Protein Structure, Tertiary
10.
Lipids Health Dis ; 12: 68, 2013 May 09.
Article En | MEDLINE | ID: mdl-23659495

BACKGROUND: Alzheimer's disease (AD), the most common cause of dementia among neurodegenerative diseases, afflicts millions of elderly people worldwide. In addition to amyloid-beta (Aß) peptide and phosphorylated tau, lipid dysregulation is suggested to participate in AD pathogenesis. However, alterations in individual lipid species and their role in AD disease progression remain unclear. METHODS: We performed a lipidomic analysis using brain tissues and plasma obtained from mice expressing mutated human amyloid precursor protein (APP) and tau protein (Tg2576×JNPL3) (APP/tau mice) at 4 (pre-symptomatic phase), 10 (early symptomatic) and 15 months (late symptomatic). RESULTS: Levels of docosahexaenoyl (22:6) cholesterol ester (ChE) were markedly increased in APP/tau mice compared to controls at all stages examined. Several species of ethanolamine plasmalogens (pPEs) and sphingomyelins (SMs) showed different levels between brains from APP/tau and control mice at various stages of AD. Increased levels of 12-hydroxyeicosatetraenoic acid (12-HETE) during the early symptomatic phase were consistent with previous reports using human AD brain tissue. In addition, 19,20-dihydroxy-docosapentaenoic acid (19,20-diHDoPE) and 17,18-dihydroxy-eicosatetraenoic acid (17,18-diHETE), which are produced from docosahexaenoic acid and eicosapentaenoic acid via 19,20-epoxy-docosapentaenoic acid (19,20-EpDPE) and 17,18-epoxy-eicosatetraenoic acid (17,18-EpETE), respectively, were significantly increased in APP/tau brains during the pre-symptomatic phase, and concomitant increases occurred in plasma. Several arachidonic acid metabolites such as prostaglandin D2 (PGD2) and 15-hydroxyeicosatetraenoic acid (15-HETE), which have potential deteriorating and protective actions, respectively, were decreased in the early symptomatic phase of APP/tau mice. Significant decreases in phosphatidylcholines and PEs with polyunsaturated fatty acids were also detected in the late symptomatic phase, indicating a perturbation of membrane properties. CONCLUSION: Our results provide fundamental information on lipid dysregulation during various stages of human AD.


Alzheimer Disease/genetics , Amyloid beta-Protein Precursor/biosynthesis , Brain/metabolism , tau Proteins/biosynthesis , Adult , Aged , Alzheimer Disease/pathology , Alzheimer Disease/therapy , Amyloid beta-Protein Precursor/genetics , Animals , Arachidonic Acid/biosynthesis , Arachidonic Acid/genetics , Cholesterol Esters/biosynthesis , Cholesterol Esters/genetics , Disease Models, Animal , Humans , Mice , Mice, Transgenic/metabolism , Mutation , Plasmalogens/biosynthesis , Plasmalogens/genetics , Sphingomyelins/biosynthesis , Sphingomyelins/genetics , tau Proteins/genetics
11.
Hum Mutat ; 33(1): 189-97, 2012 Jan.
Article En | MEDLINE | ID: mdl-21990100

Rhizomelic chondrodysplasia punctata (RCDP) is a disorder of peroxisome metabolism resulting from a deficiency of plasmalogens, a specialized class of membrane phospholipids. Classically, patients have a skeletal dysplasia and profound mental retardation, although milder phenotypes are increasingly being identified. It is commonly caused by defects in the peroxisome transporter, PEX7 (RCDP1), and less frequently due to defects in the peroxisomal enzymes required to initiate plasmalogen synthesis, GNPAT (RCDP2) and AGPS (RCDP3). PEX7 transports AGPS into the peroxisome, where AGPS and GNPAT partner on the luminal membrane surface. The presence of AGPS is thought to be required for GNPAT activity. We present six additional probands with RCDP2 and RCDP3, and the novel mutations identified in them. Using cell lines from these and previously reported patients, we compared the amounts of both AGPS and GNPAT proteins present for the first time. We used protein modeling to predict the structural consequences of AGPS mutations and transcript analysis to predict consequences of GNPAT mutations, and show that milder RCDP phenotypes are likely to be associated with residual protein function. In addition, we propose that full GNPAT activity depends not only on the presence of AGPS, but also on the integrity of substrate channeling from GNPAT to AGPS.


Acyltransferases/genetics , Alkyl and Aryl Transferases/genetics , Chondrodysplasia Punctata, Rhizomelic/genetics , Mutation , Acyltransferases/metabolism , Alkyl and Aryl Transferases/metabolism , Base Sequence , Cell Line , Child , Child, Preschool , Chondrodysplasia Punctata, Rhizomelic/enzymology , DNA Mutational Analysis , Female , Genetic Association Studies , Humans , Male , Molecular Sequence Data , Pedigree , Peroxisomes/genetics , Peroxisomes/metabolism , Plasmalogens/genetics , Plasmalogens/metabolism , RNA, Messenger/biosynthesis , Severity of Illness Index
12.
J Biol Chem ; 286(28): 24916-30, 2011 Jul 15.
Article En | MEDLINE | ID: mdl-21515882

Lysoplasmalogenase (EC 3.3.2.2 and EC 3.3.2.5) is an enzyme that catalyzes hydrolytic cleavage of the vinyl ether bond of lysoplasmalogen, forming fatty aldehyde and glycerophosphoethanolamine or glycerophosphocholine and is specific for the sn-2-deacylated form of plasmalogen. Here we report the purification, characterization, identification, and cloning of lysoplasmalogenase. Rat liver microsomal lysoplasmalogenase was solubilized with octyl glucoside and purified 500-fold to near homogeneity using four chromatography steps. The purified enzyme has apparent K(m) values of ∼50 µm for both lysoplasmenylcholine and lysoplasmenylethanolamine and apparent V(m) values of 24.5 and 17.5 µmol/min/mg protein for the two substrates, respectively. The pH optimum was 7.0. Lysoplasmalogenase was competitively inhibited by lysophosphatidic acid (K(i) ∼20 µm). The predominant band on a gel at ∼19 kDa was subjected to trypsinolysis, and the peptides were identified by mass spectrometry as Tmem86b, a protein of unknown function. Transient transfection of human embryonic kidney (HEK) 293T cells showed that TMEM86b cDNA yielded lysoplasmalogenase activity, and Western blot analyses confirmed the synthesis of TMEM86b protein. The protein was localized in the membrane fractions. The TMEM86b gene was also transformed into Escherichia coli, and its expression was verified by Western blot and activity analyses. Tmem86b is a hydrophobic transmembrane protein of the YhhN family. Northern blot analyses demonstrated that liver expressed the highest level of Tmem86b, which agreed with tissue distribution of activity. Overexpression of TMEM86b in HEK 293T cells resulted in decreased levels of plasmalogens, suggesting that the enzyme may be important in regulating plasmalogen levels in animal cells.


Hydrolases , Liver/enzymology , Lysophospholipids/metabolism , Membrane Proteins , Microsomes, Liver/enzymology , Plasmalogens/metabolism , Animals , HEK293 Cells , Humans , Hydrogen-Ion Concentration , Hydrolases/chemistry , Hydrolases/genetics , Hydrolases/metabolism , Lysophospholipids/genetics , Male , Mass Spectrometry , Membrane Proteins/chemistry , Membrane Proteins/genetics , Membrane Proteins/metabolism , Plasmalogens/genetics , Rats , Rats, Sprague-Dawley
13.
J Cell Biochem ; 112(5): 1250-8, 2011 May.
Article En | MEDLINE | ID: mdl-21465523

Peroxisome biogenesis disorders (PBDs) are multisystemic autosomal recessive disorders resulting from mutations in PEX genes required for normal peroxisome assembly and metabolic activities. Here, we evaluated the potential effectiveness of aminoglycoside G418 (geneticin) and PTC124 (ataluren) nonsense suppression therapies for the treatment of PBD patients with disease-causing nonsense mutations. PBD patient skin fibroblasts producing stable PEX2 or PEX12 nonsense transcripts and Chinese hamster ovary (CHO) cells with a Pex2 nonsense allele all showed dramatic improvements in peroxisomal very long chain fatty acid catabolism and plasmalogen biosynthesis in response to G418 treatments. Cell imaging assays provided complementary confirmatory evidence of improved peroxisome assembly in G418-treated patient fibroblasts. In contrast, we observed no appreciable rescue of peroxisome lipid metabolism or assembly for any patient fibroblast or CHO cell culture treated with various doses of PTC124. Additionally, PTC124 did not show measurable nonsense suppression in immunoblot assays that directly evaluated the read-through of PEX7 nonsense alleles found in PBD patients with rhizomelic chondrodysplasia punctata type 1 (RCDP1). Overall, our results support the continued development of safe and effective nonsense suppressor therapies that could benefit a significant subset of individuals with PBDs. Furthermore, we suggest that the described cell culture assay systems could be useful for evaluating and screening for novel nonsense suppressor therapies.


Gentamicins/therapeutic use , Membrane Proteins/genetics , Oxadiazoles/therapeutic use , Alleles , Animals , CHO Cells , Chondrodysplasia Punctata, Rhizomelic/metabolism , Chondrodysplasia Punctata, Rhizomelic/therapy , Codon, Nonsense/drug effects , Cricetinae , Cricetulus , Female , Fibroblasts/metabolism , Humans , Lipid Metabolism/genetics , Peroxisomal Biogenesis Factor 2 , Peroxisomal Disorders/drug therapy , Peroxisomal Disorders/genetics , Peroxisomal Targeting Signal 2 Receptor , Plasmalogens/genetics , Plasmalogens/metabolism , Receptors, Cytoplasmic and Nuclear/metabolism
14.
Biochim Biophys Acta ; 1763(12): 1511-26, 2006 Dec.
Article En | MEDLINE | ID: mdl-17027098

Chemical and physico-chemical properties as well as physiological functions of major mammalian ether-linked glycerolipids, including plasmalogens were reviewed. Their chemical structures were described and their effect on membrane fluidity and membrane fusion discussed. The recent generation of mouse models with ether lipid deficiency offered the possibility to study ether lipid and particularly plasmalogen functions in vivo. Ether lipid-deficient mice revealed severe phenotypic alterations, including arrest of spermatogenesis, development of cataract and defects in central nervous system myelination. In several cell culture systems lack of plasmalogens impaired intracellular cholesterol distribution affecting plasma membrane functions and structural changes of ER and Golgi cisternae. Based on these phenotypic anomalies that were accurately described conclusions were drawn on putative functions of plasmalogens. These functions were related to cell-cell or cell-extracellular matrix interactions, formation of lipid raft microdomains and intracellular cholesterol homeostasis. There are several human disorders, such as Zellweger syndrome, rhizomelic chondrodysplasia punctata, Alzheimer's disease, Down syndrome, and Niemann-Pick type C disease that are distinguished by altered tissue plasmalogen concentrations. The role plasmalogens might play in the pathology of these disorders is discussed.


Plasmalogens/physiology , Acyltransferases/genetics , Animals , Cataract/genetics , Cell Membrane/metabolism , Cholesterol/metabolism , Endoplasmic Reticulum/metabolism , Golgi Apparatus/metabolism , Hereditary Central Nervous System Demyelinating Diseases/genetics , Lens, Crystalline/abnormalities , Lens, Crystalline/metabolism , Male , Membrane Fluidity , Membrane Fusion , Mice , Mice, Knockout , Peroxisomal Targeting Signal 2 Receptor , Plasmalogens/genetics , Receptors, Cytoplasmic and Nuclear/genetics , Spermatogenesis/genetics
15.
Am J Hum Genet ; 72(2): 471-7, 2003 Feb.
Article En | MEDLINE | ID: mdl-12522768

Patients affected with Refsum disease (RD) have elevated levels of phytanic acid due to a deficiency of the peroxisomal enzyme phytanoyl-CoA hydroxylase (PhyH). In most patients with RD, disease-causing mutations in the PHYH gene have been identified, but, in a subset, no mutations could be found, indicating that the condition is genetically heterogeneous. Linkage analysis of a few patients diagnosed with RD, but without mutations in PHYH, suggested a second locus on chromosome 6q22-24. This region includes the PEX7 gene, which codes for the peroxin 7 receptor protein required for peroxisomal import of proteins containing a peroxisomal targeting signal type 2. Mutations in PEX7 normally cause rhizomelic chondrodysplasia punctata type 1, a severe peroxisomal disorder. Biochemical analyses of the patients with RD revealed defects not only in phytanic acid alpha-oxidation but also in plasmalogen synthesis and peroxisomal thiolase. Furthermore, we identified mutations in the PEX7 gene. Our data show that mutations in the PEX7 gene may result in a broad clinical spectrum ranging from severe rhizomelic chondrodysplasia punctata to relatively mild RD and that clinical diagnosis of conditions involving retinitis pigmentosa, ataxia, and polyneuropathy may require a full screen of peroxisomal functions.


Receptors, Cytoplasmic and Nuclear/genetics , Refsum Disease/genetics , Acetyl-CoA C-Acetyltransferase/genetics , Acetyl-CoA C-Acetyltransferase/metabolism , Adult , Alleles , Cells, Cultured , Chromosomes, Human, Pair 6 , Female , Fibroblasts/cytology , Fibroblasts/enzymology , Genetic Linkage , Humans , Male , Mixed Function Oxygenases/genetics , Mixed Function Oxygenases/metabolism , Mutation , Peroxisomal Targeting Signal 2 Receptor , Phytanic Acid/blood , Plasmalogens/biosynthesis , Plasmalogens/genetics , Refsum Disease/pathology , Refsum Disease/physiopathology , Siblings , Skin/cytology
16.
J Lipid Res ; 40(3): 495-503, 1999 Mar.
Article En | MEDLINE | ID: mdl-10064738

Previously, this laboratory reported the isolation of variants, RAW. 12 and RAW.108, from the macrophage-like cell line RAW 264.7 that are defective in plasmalogen biosynthesis [Zoeller, R.A. et al. 1992. J. Biol. Chem. 267: 8299-8306]. Fatty acid analysis showed significant changes in the mutants in the ethanolamine phospholipids (PE), the only phospholipid class in which the plasmalogen species, plasmenylethanolamine, contributes significantly. Within the PE fraction, docosapentaenoic (DPA; 22:5n-3) and docosahexaenoic (DHA; 22:6n-3) acids were reduced by approximately 50% in the variants while the levels of arachidonic acid (AA; 20:4n-6) remained unaffected. The decrease in DHA was accompanied by a 50% decrease in labeling PE with [3H]DHA over a 90-min period. Restoration of plasmenylethanolamine by supplementing the growth medium with sn -1-hexadecylglycerol (HG) completely reversed these changes in RAW. 108. Pre-existing pools of plasmenylethanolamine were not required for restoration of normal [3H]DHA labeling; addition of HG only during the labeling period was sufficient. Due to the loss of Delta1'-desaturase in RAW.12, HG supplementation resulted in the accumulation of plasmenylethanolamine's immediate biosynthetic precursor, plasmanylethanolamine. Even though this latter phospholipid contained only the ether functionality (lacking the vinyl ether double bond) it was sufficient to restore wild type-like fatty acid composition and DHA labeling of the ethanolamine phospholipids, identifying the ether bond as a structural determinant for this specificity. In summary, we have used these mutants to establish that the plasmalogen status of a cell can influence the levels of certain polyunsaturated fatty acids. These results support the notion that certain polyunsaturated fatty acids, such as DHA, can be selectively targeted to plasmalogens and that this targeting occurs during de novo biosynthesis, or shortly thereafter, through modification of nascent plasmalogen pools.


Docosahexaenoic Acids/metabolism , Lipids/deficiency , Macrophages/metabolism , Plasmalogens/metabolism , Animals , Arachidonic Acid/metabolism , Cell Line , Fatty Acids/analysis , Mice , Oleic Acid/metabolism , Phosphatidylcholines/analysis , Phosphatidylserines/analysis , Phospholipids/analysis , Plasmalogens/genetics
18.
Proc Natl Acad Sci U S A ; 83(14): 5170-4, 1986 Jul.
Article En | MEDLINE | ID: mdl-3460088

A rapid autoradiographic screening procedure has been developed for identifying Chinese hamster ovary cell mutants defective in the peroxisomal enzyme dihydroxyacetonephosphate (DHAP) acyltransferase. Ten mutants were found among 60,000 colonies grown from a stock of mutagen-treated cells, and 3 have been characterized with respect to their enzymology and phospholipid biosynthesis. All three contain 3% (or less) of the parental DHAP acyltransferase activity measured at pH 5.5, the optimum for the peroxisomal enzyme. When measured at pH 7.4, all three contained 70-85% of the wild-type activity, but it was sensitive to N-ethylmaleimide. Glycerol-3-phosphate acyltransferase activities were identical in mutant and parent strains. Two other peroxisomal enzymes, alkyl-DHAP synthase and particulate catalase, were also reduced by factors of 5-10 in all three mutants, suggesting that these strains are deficient in some aspect of peroxisome assembly, possibly like cells from patients with Zellweger syndrome. Short-term and long-term labeling with 32Pi revealed that these mutants are grossly deficient in the de novo synthesis and content of plasmalogens. In parental cells the plasmalogen form of phosphatidylethanolamine constitutes 7.1% of the total phospholipid, but it is reduced to 0.7% in the mutants. This decrease is accompanied by a compensatory increase in the diacyl form of phosphatidylethanolamine. The results presented here support the view that there are two DHAP acyltransferases in animal cells and that the peroxisome is essential for the biosynthesis of plasmalogens.


Acyltransferases/genetics , Alkyl and Aryl Transferases , Microbodies/metabolism , Plasmalogens/biosynthesis , Acyltransferases/analysis , Animals , Autoradiography/methods , Catalase/analysis , Catalase/genetics , Cricetinae , Cricetulus , Female , Fibroblasts/enzymology , Glycerol-3-Phosphate O-Acyltransferase/analysis , Microbodies/enzymology , Morphogenesis , Ovary , Phospholipids/analysis , Plasmalogens/genetics , Transferases/analysis , Transferases/genetics
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