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1.
Biochem J ; 478(23): 4137-4149, 2021 12 10.
Artículo en Inglés | MEDLINE | ID: mdl-34796899

RESUMEN

Ornithine decarboxylase (ODC) is the rate-limiting enzyme for the synthesis of polyamines (PAs). PAs are oncometabolites that are required for proliferation, and pharmaceutical ODC inhibition is pursued for the treatment of hyperproliferative diseases, including cancer and infectious diseases. The most potent ODC inhibitor is 1-amino-oxy-3-aminopropane (APA). A previous crystal structure of an ODC-APA complex indicated that APA non-covalently binds ODC and its cofactor pyridoxal 5-phosphate (PLP) and functions by competing with the ODC substrate ornithine for binding to the catalytic site. We have revisited the mechanism of APA binding and ODC inhibition through a new crystal structure of APA-bound ODC, which we solved at 2.49 Šresolution. The structure unambiguously shows the presence of a covalent oxime between APA and PLP in the catalytic site, which we confirmed in solution by mass spectrometry. The stable oxime makes extensive interactions with ODC but cannot be catabolized, explaining APA's high potency in ODC inhibition. In addition, we solved an ODC/PLP complex structure with citrate bound at the substrate-binding pocket. These two structures provide new structural scaffolds for developing more efficient pharmaceutical ODC inhibitors.


Asunto(s)
Inhibidores de la Ornitina Descarboxilasa/metabolismo , Ornitina Descarboxilasa/metabolismo , Propilaminas/metabolismo , Humanos , Unión Proteica , Dominios Proteicos
2.
Brain Res ; 1765: 147508, 2021 08 15.
Artículo en Inglés | MEDLINE | ID: mdl-33930376

RESUMEN

Cerebral vasospasm (CVS) causes mortality and morbidity in patients after subarachnoid hemorrhage (SAH). The mechanism and adequate treatment of CVS are still elusive. R-568 is a calcimimetic agent known to exert a vasodilating effect. However, there is no report on its vasodilator effect against SAH-induced vasospasm. In the present study, we investigated the therapeutic effect of R-568 on the SAH-induced CVS model in rats. Seventy-two adult male Sprague-Dawley rats were divided into 8 groups: sham surgery; SAH only; SAH + Vehicle, SAH + R-568; SAH + R-568 + Wortmannin (the PI3K inhibitor); SAH + Wortmannin; SAH + R-568 + Calhex-231 (a calcilytic agent); SAH + Calhex-231. SAH was induced by blood (0.3 mL) given by intracisternal injection. R-568 (20 µM) was administered intracisternal immediately prior to experimental SAH. Basilar arteries (BAs) were obtained to evaluate PI3K/Akt/eNOS pathway (immunoblotting) and morphological changes 48 h after SAH. Perimeters of BAs were decreased by 24.1% in the SAH group compared to the control group and the wall thickness was increased by 75.3%. With R-568 treatment, those percentages were 9.6% and 29.6%, respectively, indicating that vasospasm was considerably improved when compared with the SAH group (P < 0.001 in both). While p-PI3K/PI3K and p-Akt/Akt ratio and eNOS protein expression were markedly decreased in the SAH rats, treatment with R-568 resulted in a significant increase in these levels. The beneficial effects of R-568 were partially blocked in the presence of Calhex-231 and completely blocked in the presence of Wortmannin. Herein, we found that treatment with R-568 would attenuate SAH-induced CVS through the PI3K/Akt/eNOS pathway and demonstrate therapeutic promise in CVS treatment following SAH.


Asunto(s)
Fenetilaminas/farmacología , Propilaminas/farmacología , Hemorragia Subaracnoidea/tratamiento farmacológico , Vasoespasmo Intracraneal/tratamiento farmacológico , Animales , Calcimiméticos/farmacología , Modelos Animales de Enfermedad , Masculino , Óxido Nítrico Sintasa de Tipo III/metabolismo , Fenetilaminas/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , Propilaminas/metabolismo , Proteínas Proto-Oncogénicas c-akt/metabolismo , Ratas , Ratas Sprague-Dawley , Transducción de Señal/efectos de los fármacos , Hemorragia Subaracnoidea/fisiopatología , Vasoespasmo Intracraneal/metabolismo
3.
J Biol Chem ; 296: 100645, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33839156

RESUMEN

Interactions of membrane-bound mammalian cytochromes P450 (CYPs) with NADPH-cytochrome P450 oxidoreductase (POR), which are required for metabolism of xenobiotics, are facilitated by membrane lipids. A variety of membrane mimetics, such as phospholipid liposomes and nanodiscs, have been used to simulate the membrane to form catalytically active CYP:POR complexes. However, the exact mechanism(s) of these interactions are unclear because of the absence of structural information of full-length mammalian CYP:POR complexes in membranes. Herein, we report the use of amphipols (APols) to form a fully functional, soluble, homogeneous preparation of full-length CYP:POR complexes amenable to biochemical and structural study. Incorporation of CYP2B4 and POR into APols resulted in a CYP2B4:POR complex with a stoichiometry of 1:1, which was fully functional in demethylating benzphetamine at a turnover rate of 37.7 ± 2.2 min-1, with a coupling efficiency of 40%. Interestingly, the stable complex had a molecular weight (Mw) of 338 ± 22 kDa determined by multiangle light scattering, suggestive of a tetrameric complex of 2CYP2B4:2POR embedded in one APol nanoparticle. Moreover, negative stain electron microscopy (EM) validated the homogeneity of the complex and allowed us to generate a three-dimensional EM map and model consistent with the tetramer observed in solution. This first report of the full-length mammalian CYP:POR complex by transmission EM not only reveals the architecture that facilitates electron transfer but also highlights a potential use of APols in biochemical and structural studies of functional CYP complexes with redox partners.


Asunto(s)
Hidrocarburo de Aril Hidroxilasas/metabolismo , NADPH-Ferrihemoproteína Reductasa/metabolismo , Polímeros/metabolismo , Propilaminas/metabolismo , Animales , Hidrocarburo de Aril Hidroxilasas/química , Catálisis , Familia 2 del Citocromo P450/química , Familia 2 del Citocromo P450/metabolismo , NADPH-Ferrihemoproteína Reductasa/química , Unión Proteica , Conformación Proteica , Multimerización de Proteína , Conejos
4.
Elife ; 92020 11 02.
Artículo en Inglés | MEDLINE | ID: mdl-33136002

RESUMEN

Legionella pneumophila extensively modulates the host ubiquitin network to create the Legionella-containing vacuole (LCV) for its replication. Many of its virulence factors function as ubiquitin ligases or deubiquitinases (DUBs). Here, we identify Lem27 as a DUB that displays a preference for diubiquitin formed by K6, K11, or K48. Lem27 is associated with the LCV where it regulates Rab10 ubiquitination in concert with SidC and SdcA, two bacterial E3 ubiquitin ligases. Structural analysis of the complex formed by an active fragment of Lem27 and the substrate-based suicide inhibitor ubiquitin-propargylamide (PA) reveals that it harbors a fold resembling those in the OTU1 DUB subfamily with a Cys-His catalytic dyad and that it recognizes ubiquitin via extensive hydrogen bonding at six contact sites. Our results establish Lem27 as a DUB that functions to regulate protein ubiquitination on L. pneumophila phagosomes by counteracting the activity of bacterial ubiquitin E3 ligases.


Asunto(s)
Proteínas Bacterianas/metabolismo , Enzimas Desubicuitinizantes/metabolismo , Legionella pneumophila/enzimología , Fagosomas/enzimología , Ubiquitina-Proteína Ligasas/metabolismo , Ubiquitina/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Enzimas Desubicuitinizantes/genética , Legionella pneumophila/química , Legionella pneumophila/genética , Legionella pneumophila/metabolismo , Pargilina/análogos & derivados , Pargilina/metabolismo , Fagosomas/metabolismo , Propilaminas/metabolismo , Ubiquitina/química , Ubiquitina-Proteína Ligasas/genética , Ubiquitinación , Vacuolas/enzimología , Vacuolas/genética , Vacuolas/metabolismo
5.
Toxicol Lett ; 295: 397-407, 2018 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-30036687

RESUMEN

Bromo-dragonfly is a benzodifuran derivative known as one of the most potent 5-HT2A-receptor agonists within this chemical class, with long-lasting effects of up to 2-3 days. In addition to hallucinogenic effects, the drug is a potent vasoconstrictor, resulting in severe adverse effects, such as necrosis of the limbs. In some cases, intoxication has had fatal outcomes. Little is known about the metabolism of bromo-dragonfly. The aims of this study were to investigate the pharmacokinetics of bromo-dragonfly, determine the plasma protein binding, examine the human hepatic metabolism in vitro, and compare with those of its close analogue, 2C-B-fly. Additionally, we assayed the inhibition potency of both compounds on the monoamine oxidase (MAO) A- and B-mediated oxidative deamination of serotonin (5-HT) and dopamine, respectively. Liquid chromatography high-resolution mass spectrometry was used for metabolism studies in pooled human liver microsomes (HLM), pooled human liver cytosol (HLC) and recombinant enzymes. Inhibition studies of the deamination of 5-HT and dopamine were carried out using LC-MS/MS. Bromo-dragonfly was not metabolised in the tested in vitro systems. On the other hand, 2C-B-fly was metabolised in HLM by CYP2D6 and in HLC to some extent, with the main biotransformations being monohydroxylation and N-acetylation. Furthermore, MAO-A metabolised 2C-B-fly, producing the aldehyde metabolite, which was trapped in vitro with methoxyamine. Inhibition experiments revealed that bromo-dragonfly is a competitive inhibitor of MAO-A with a Ki of 0.352 µM. The IC50 value for bromo-dragonfly indicated that the inhibition of MAO-A may be clinically relevant. However, more data are needed to estimate its impact on the increase of 5-HT in vivo.


Asunto(s)
Bromobenzoatos/metabolismo , Bromobenzoatos/farmacología , Alucinógenos/metabolismo , Alucinógenos/farmacología , Microsomas Hepáticos/enzimología , Inhibidores de la Monoaminooxidasa/metabolismo , Inhibidores de la Monoaminooxidasa/farmacología , Monoaminooxidasa/metabolismo , Propilaminas/metabolismo , Propilaminas/farmacología , Acetilación , Biotransformación , Cromatografía Líquida de Alta Presión , Citocromo P-450 CYP2D6/metabolismo , Desaminación , Dopamina/metabolismo , Humanos , Hidroxilación , Cinética , Oxidación-Reducción , Unión Proteica , Serotonina/metabolismo , Espectrometría de Masas en Tándem
6.
Phys Chem Chem Phys ; 20(26): 17829-17838, 2018 Jul 14.
Artículo en Inglés | MEDLINE | ID: mdl-29923574

RESUMEN

The aggregation processes of magnetic nanoparticles in biosystems are analysed by comparing the magnetic properties of three systems with different spatial distributions of the nanoparticles. The first one is iron oxide nanoparticles (NPs) of 14 nm synthesized by coprecipitation with two coatings, (3-aminopropyl)trimethoxysilane (APS) and dimercaptosuccinic acid (DMSA). The second one is liposomes with encapsulated nanoparticles, which have different configurations depending on the NP coating (NPs attached to the liposome surface or encapsulated in its aqueous volume). The last system consists of two cell lines (Pan02 and Jurkat) incubated with the NPs. Dynamic magnetic behaviour (AC) was analysed in liquid samples, maintaining their colloidal properties, while quasi-static (DC) magnetic measurements were performed on lyophilised samples. AC measurements provide a direct method for determining the effect of the environment on the magnetization relaxation of nanoparticles. Thus, the imaginary (χ'') component shifts to lower frequencies as the aggregation state increases from free nanoparticles to those attached or embedded into liposomes in cell culture media and more pronounced when internalized by the cells. DC magnetization curves show no degradation of the NPs after interaction with biosystems in the analysed timescale. However, the blocking temperature is shifted to higher temperatures for the nanoparticles in contact with the cells, regardless of the location, the incubation time, the cell line and the nanoparticle coating, supporting AC susceptibility data. These results indicate that the simple fact of being in contact with the cells makes the nanoparticles aggregate in a non-controlled way, which is not the same kind of aggregation caused by the contact with the cell medium nor inside liposomes.


Asunto(s)
Portadores de Fármacos/química , Liposomas/química , Fenómenos Magnéticos , Nanopartículas de Magnetita/química , 1,2-Dipalmitoilfosfatidilcolina/química , Animales , Línea Celular Tumoral , Membrana Celular/metabolismo , Portadores de Fármacos/toxicidad , Endocitosis , Humanos , Liposomas/toxicidad , Nanopartículas de Magnetita/toxicidad , Ratones , Tamaño de la Partícula , Propilaminas/química , Propilaminas/metabolismo , Propilaminas/toxicidad , Silanos/química , Silanos/metabolismo , Silanos/toxicidad , Succímero/química , Succímero/metabolismo , Succímero/toxicidad , Temperatura
7.
Xenobiotica ; 48(5): 478-487, 2018 May.
Artículo en Inglés | MEDLINE | ID: mdl-28608746

RESUMEN

1. Oxybutynin hydrochloride is an antimuscarinic agent prescribed to patients with an overactive bladder (OAB) and symptoms of urinary urge incontinence. Oxybutynin undergoes pre-systemic metabolism, and the N-desethyloxybutynin (Oxy-DE), is reported to have similar anticholinergic effects. 2. We revisited the oxidative metabolic fate of oxybutynin by liquid chromatography-tandem mass spectrometry analysis of incubations with rat and human liver fractions, and by measuring plasma and urine samples collected after oral administration of oxybutynin in rats. This investigation highlighted that not only N-deethylation but also N-oxidation participates in the clearance of oxybutynin after oral administration. 3. A new metabolic scheme for oxybutynin was delineated, identifying three distinct oxidative metabolic pathways: N-deethylation (Oxy-DE) followed by the oxidation of the secondary amine function to form the hydroxylamine (Oxy-HA), N-oxidation (Oxy-NO) followed by rearrangement of the tertiary propargylamine N-oxide moiety (Oxy-EK), and hydroxylation on the cyclohexyl ring. 4. The functional activity of Oxy-EK was investigated on the muscarinic receptors (M1-3) demonstrating its lack of antimuscarinic activity. 5. Despite the presence of the α,ß-unsaturated function, Oxy-EK does not react with glutathione indicating that in the clearance of oxybutynin no reactive and potentially toxic metabolites were formed.


Asunto(s)
Cetonas/metabolismo , Ácidos Mandélicos/metabolismo , Pargilina/análogos & derivados , Propilaminas/metabolismo , Administración Oral , Animales , Cromatografía Liquida , Glucurónidos/metabolismo , Humanos , Masculino , Ácidos Mandélicos/sangre , Ácidos Mandélicos/química , Ácidos Mandélicos/orina , Espectrometría de Masas , Redes y Vías Metabólicas , Microsomas Hepáticos/metabolismo , Oxidación-Reducción , Pargilina/química , Pargilina/metabolismo , Propilaminas/química , Ratas Sprague-Dawley , Ratas Wistar , Receptores Muscarínicos/metabolismo
8.
Sci Rep ; 7(1): 14841, 2017 11 01.
Artículo en Inglés | MEDLINE | ID: mdl-29093526

RESUMEN

Spermine oxidase (SMOX) catalyzes oxidation of spermine to generate spermidine, hydrogen peroxide (H2O2) and 3-aminopropanal, which is spontaneously converted to acrolein. SMOX is induced by a variety of stimuli including bacterial infection, polyamine analogues and acetaldehyde exposure. However, the physiological functions of SMOX are not yet fully understood. We investigated the physiological role of SMOX in liver cells using human hepatocellular carcinoma cell line HepG2. SMOX localized to the bile canalicular lumen, as determined by F-actin staining. Knockdown of SMOX reduced the formation of bile canalicular lumen. We also found that phospho-Akt (phosphorylated protein kinase B) was localized to canalicular lumen. Treatment with Akt inhibitor significantly reduced the formation of bile canalicular lumen. Acrolein scavenger also inhibited the formation of bile canalicular lumen. PTEN, phosphatase and tensin homolog and an inhibitor of Akt, was alkylated in a SMOX-dependent manner. Our results suggest that SMOX plays a central role in the formation of bile canalicular lumen in liver cells by activating Akt pathway through acrolein production.


Asunto(s)
Acroleína/metabolismo , Canalículos Biliares/ultraestructura , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/fisiología , Actinas/metabolismo , Aldehídos/metabolismo , Alquilación , Canalículos Biliares/química , Células Hep G2 , Humanos , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/análisis , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/genética , Fosfohidrolasa PTEN/metabolismo , Fosforilación , Propilaminas/metabolismo , Proteínas Proto-Oncogénicas c-akt/metabolismo , Poliamino Oxidasa
9.
Appl Microbiol Biotechnol ; 101(14): 5677-5687, 2017 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-28516206

RESUMEN

Chiral amines are essential precursors in the production of biologically active compounds, including several important drugs. Among the biocatalytic strategies that have been developed for their synthesis, the use of ω-transaminases (ω-TA) appears as an attractive alternative allowing the stereoselective amination of prochiral ketones. However, the problems associated with narrow substrate specificity, unfavourable reaction equilibrium and expensive amine donors still hamper its industrial application. The search for novel enzymes from nature can contribute to expand the catalytic repertoire of ω-TA and help to circumvent some of these problems. A genome mining approach, based on the work described by Höhne et al., was applied for selection of potential R-ω-TA. Additional criteria were used to select an enzyme that differs from previously described ones. A candidate R-ω-TA from Capronia semiimmersa was selected, cloned and expressed in Escherichia coli. Interestingly, alignment of this enzyme with previously reported TA sequences revealed the presence of two additional amino acid residues in a loop close to the active site. The impact of this change was analysed with a structural model based on crystallized R-ω-TAs. Analysis of the substrate specificity of R-ω-TA from C. semiimmersa indicates that it accepts a diversity of ketones as substrates yielding the corresponding amine with good yields and excellent enantioselectivity. The expressed enzyme accepts isopropylamine as amine donor what makes it suitable for industrial processes.


Asunto(s)
Ascomicetos/enzimología , Transaminasas/genética , Transaminasas/metabolismo , Ascomicetos/genética , Biocatálisis , Dominio Catalítico , Clonación Molecular , Cristalización , Escherichia coli/genética , Genoma Fúngico , Cetonas/química , Propilaminas/metabolismo , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Alineación de Secuencia , Especificidad por Sustrato , Transaminasas/química , Transaminasas/aislamiento & purificación
10.
J Biochem ; 161(4): 389-398, 2017 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-28003434

RESUMEN

l-Methionine decarboxylase (MetDC) from Streptomyces sp. 590 depends on pyridoxal 5'-phosphate and catalyzes the non-oxidative decarboxylation of l-methionine to produce 3-methylthiopropylamine and carbon dioxide. MetDC gene (mdc) was determined to consist of 1,674 bp encoding 557 amino acids, and the amino acid sequence is similar to that of l-histidine decarboxylases and l-valine decarboxylases from Streptomyces sp. strains. The mdc gene was cloned and recombinant MetDC was heterologously expressed by Escherichia coli. The purification of recombinant MetDC was carried out by DEAE-Toyopearl and Ni-NTA agarose column chromatography. The recombinant enzyme was homodimeric with a molecular mass of 61,000 Da and showed optimal activity between 45 to 55 °C and at pH 6.6, and the stability below 30 °C and between pH 4.6 to 7.0. l-Methionine and l-norleucine were good substrates for MetDC. The Michaelis constants for l-methionine and l-norleucine were 30 and 73 mM, respectively. The recombinant MetDC (0.50 U/ml) severely inhibited growth of human tumour cells A431 (epidermoid ovarian carcinoma cell line) and MDA-MB-231 (breast cancer cell line), however showed relatively low cytotoxicity for human normal cell NHDF-Neo (dermal fibroblast cell line from neonatal foreskin). This study revealed the properties of the gene and the protein sequence of MetDC for the first time.


Asunto(s)
Proteínas Bacterianas/metabolismo , Carboxiliasas/metabolismo , Proteínas Recombinantes/metabolismo , Streptomyces/enzimología , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Proteínas Bacterianas/aislamiento & purificación , Secuencia de Bases , Dióxido de Carbono/metabolismo , Carboxiliasas/clasificación , Carboxiliasas/genética , Línea Celular , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Clonación Molecular , Electroforesis en Gel de Poliacrilamida , Estabilidad de Enzimas , Humanos , Concentración de Iones de Hidrógeno , Cinética , Metionina/metabolismo , Peso Molecular , Filogenia , Propilaminas/metabolismo , Multimerización de Proteína , Fosfato de Piridoxal/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/farmacología , Espectrofotometría , Streptomyces/genética , Especificidad por Sustrato , Temperatura
11.
J Appl Toxicol ; 37(3): 243-252, 2017 03.
Artículo en Inglés | MEDLINE | ID: mdl-27291301

RESUMEN

The novel psychoactive compounds derived from amphetamine have been illegally abused as recreational drugs, some of which are known to be hepatotoxic in humans and experimental animals. The cytotoxic effects and mechanisms of 5-(2-aminopropyl)benzofuran (5-APB) and N-methyl-5-(2-aminopropyl)benzofuran (5-MAPB), both of which are benzofuran analogues of amphetamine, and 3,4-methylenedioxy-N-methamphetamine (MDMA) were studied in freshly isolated rat hepatocytes. 5-MAPB caused not only concentration-dependent (0-4.0 mm) and time-dependent (0-3 h) cell death accompanied by the depletion of cellular ATP and reduced glutathione and protein thiol levels, but also accumulation of oxidized glutathione. Of the other analogues examined at a concentration of 4 mm, 5-MAPB/5-APB-induced cytotoxicity with the production of reactive oxygen species and loss of mitochondrial membrane potential was greater than that induced by MDMA. In isolated rat liver mitochondria, the benzofurans resulted in a greater increase in the rate of state 4 oxygen consumption than did MDMA, with a decrease in the rate of state 3 oxygen consumption. Furthermore, the benzofurans caused more of a rapid mitochondrial swelling dependent on the mitochondrial permeability transition than MDMA. 5-MAPB at a weakly toxic level (1 mm) was metabolized slowly: levels of 5-MAPB and 5-APB were approximately 0.9 mm and 50 µm, respectively, after 3 h incubation. Taken collectively, these results indicate that mitochondria are target organelles for the benzofuran analogues and MDMA, which elicit cytotoxicity through mitochondrial failure, and the onset of cytotoxicity may depend on the initial and/or residual concentrations of 5-MAPB rather than on those of its metabolite 5-APB. Copyright © 2016 John Wiley & Sons, Ltd.


Asunto(s)
Benzofuranos/toxicidad , Drogas de Diseño/toxicidad , Hepatocitos/efectos de los fármacos , Metanfetamina/análogos & derivados , Propilaminas/toxicidad , Animales , Benzofuranos/metabolismo , Biotransformación , Supervivencia Celular/efectos de los fármacos , Células Cultivadas , Drogas de Diseño/metabolismo , Relación Dosis-Respuesta a Droga , Hepatocitos/metabolismo , Hepatocitos/patología , Masculino , Potencial de la Membrana Mitocondrial/efectos de los fármacos , Metanfetamina/metabolismo , Metanfetamina/toxicidad , Mitocondrias Hepáticas/efectos de los fármacos , Membranas Mitocondriales/efectos de los fármacos , Permeabilidad , Propilaminas/metabolismo , Ratas Endogámicas F344 , Especies Reactivas de Oxígeno/metabolismo
12.
Biotechnol Bioeng ; 114(3): 600-609, 2017 03.
Artículo en Inglés | MEDLINE | ID: mdl-27668843

RESUMEN

An experimental platform based on scaled-down unit operations combined in a plug-and-play manner enables easy and highly flexible testing of advanced biocatalytic process options such as in situ product removal (ISPR) process strategies. In such a platform, it is possible to compartmentalize different process steps while operating it as a combined system, giving the possibility to test and characterize the performance of novel process concepts and biocatalysts with minimal influence of inhibitory products. Here the capabilities of performing process development by applying scaled-down unit operations are highlighted through a case study investigating the asymmetric synthesis of 1-methyl-3-phenylpropylamine (MPPA) using ω-transaminase, an enzyme in the sub-family of amino transferases (ATAs). An on-line HPLC system was applied to avoid manual sample handling and to semi-automatically characterize ω-transaminases in a scaled-down packed-bed reactor (PBR) module, showing MPPA as a strong inhibitor. To overcome the inhibition, a two-step liquid-liquid extraction (LLE) ISPR concept was tested using scaled-down unit operations combined in a plug-and-play manner. Through the tested ISPR concept, it was possible to continuously feed the main substrate benzylacetone (BA) and extract the main product MPPA throughout the reaction, thereby overcoming the challenges of low substrate solubility and product inhibition. The tested ISPR concept achieved a product concentration of 26.5 gMPPA · L-1 , a purity up to 70% gMPPA · gtot-1 and a recovery in the range of 80% mol · mol-1 of MPPA in 20 h, with the possibility to increase the concentration, purity, and recovery further. Biotechnol. Bioeng. 2017;114: 600-609. © 2016 Wiley Periodicals, Inc.


Asunto(s)
Productos Biológicos/aislamiento & purificación , Productos Biológicos/metabolismo , Reactores Biológicos , Técnicas de Cultivo Celular por Lotes , Biocatálisis , Productos Biológicos/química , Biotecnología , Enzimas Inmovilizadas/metabolismo , Microbiología Industrial , Modelos Biológicos , Propilaminas/análisis , Propilaminas/química , Propilaminas/aislamiento & purificación , Propilaminas/metabolismo , Estereoisomerismo , Transaminasas/metabolismo
13.
Biochemistry ; 56(3): 458-467, 2017 01 24.
Artículo en Inglés | MEDLINE | ID: mdl-28029774

RESUMEN

N1-Acetylspermine oxidase (APAO) catalyzes the conversion of N1-acetylspermine or N1-acetylspermidine to spermidine or putrescine, respectively, with concomitant formation of N-acetyl-3-aminopropanal and hydrogen peroxide. Here we present the structure of murine APAO in its oxidized holo form and in complex with substrate. The structures provide a basis for understanding molecular details of substrate interaction in vertebrate APAO, highlighting a key role for an asparagine residue in coordinating the N1-acetyl group of the substrate. We applied computational methods to the crystal structures to rationalize previous observations with regard to the substrate charge state. The analysis suggests that APAO features an active site ideally suited for binding of charged polyamines. We also reveal the structure of APAO in complex with the irreversible inhibitor MDL72527. In addition to the covalent adduct, a second MDL72527 molecule is bound in the active site. Binding of MDL72527 is accompanied by altered conformations in the APAO backbone. On the basis of structures of APAO, we discuss the potential for development of specific inhibitors.


Asunto(s)
Oxidorreductasas/química , Putrescina/química , Espermidina/análogos & derivados , Espermidina/química , Espermina/análogos & derivados , Aldehídos/química , Aldehídos/metabolismo , Animales , Dominio Catalítico , Expresión Génica , Peróxido de Hidrógeno/química , Peróxido de Hidrógeno/metabolismo , Cinética , Ratones , Modelos Moleculares , Oxidación-Reducción , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Propilaminas/química , Propilaminas/metabolismo , Estructura Secundaria de Proteína , Putrescina/análogos & derivados , Putrescina/metabolismo , Espermidina/metabolismo , Espermina/química , Espermina/metabolismo
14.
J Biosci Bioeng ; 122(5): 570-576, 2016 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-27238833

RESUMEN

Lycopene is a member of carotenoids that exhibits strong antioxidant activity. In this study, on the basis of screening suitable strain combination [ATCC 14271(+) and ATCC 14272(-)] and establishing the optimal inoculation proportion of mated culture (1/2, +/-, w/w) for carotenoid production, the efficiency of compounds, mainly tertiary amines, on enhancing the lycopene content of Blakeslea trispora was systematically assessed. Of these compounds, tripropylamine showed the best enhancing effect, and then sequentially followed by triethylamine, tributylamine, trimethylamine, diisopropylamine, and isopropylamine. After treated with 1.8 g/L tripropylamine for two days, the lycopene proportion was increased from 1.7% to 90.1%, while the ß-carotene proportion was decreased from 91.1% to 6.4% of the total carotenoids. In this case, the lycopene and total carotenoid contents were increased to 83.2 and 92.4 mg/gDW, which were 315.8- and 5.9-fold of that of the untreated control, respectively; while the growth of mycelia was only decreased at 6.0 g/L tripropylamine. Gene expression analysis showed that all the tested genes, especially genes encoding 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmgr) and isopentenyl pyrophosphate isomerase (ipi) in mevalonate pathway, as well as phytoene desaturase (carB) in carotenoid biosynthesis process were upregulated. Therefore, tripropylamine enhanced lycopene content of B. trispora by inhibiting the cyclase activity, and by upregulating the expression of genes associated with terpenoid biosynthesis. Besides, a possible association between the structure and the lycopene-enhancing capability of these compounds was also discussed.


Asunto(s)
Carotenoides/biosíntesis , Mucorales/efectos de los fármacos , Mucorales/metabolismo , Propilaminas/farmacología , Licopeno , Mucorales/genética , Mucorales/crecimiento & desarrollo , Micelio/efectos de los fármacos , Micelio/genética , Micelio/crecimiento & desarrollo , Organismos Modificados Genéticamente , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Propilaminas/metabolismo , beta Caroteno/biosíntesis
15.
Bioorg Med Chem Lett ; 26(4): 1193-5, 2016 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-26794039

RESUMEN

Lysine-specific demethylase 2 (LSD2) demethylates mono- and dimethylated Lys-4 of histone H3 (H3K4me1 and H3K4me2). NPAC protein is known to interact with LSD2 and promote its H3K4 demethylase activity. In this study, we established a demethylation assay system that utilizes recombinant LSD2 in the presence of a synthetic NPAC peptide. Several phenylcyclopropylamine (PCPA)-based inhibitors were examined for their LSD2 inhibitory activity in the LSD2 enzymatic assay with the NPAC peptide. The assay results showed that the PCPA derivatives, including NCD41, selectively inhibited LSD1 in preference to LSD2.


Asunto(s)
Péptidos/metabolismo , Secuencia de Aminoácidos , Histona Demetilasas/antagonistas & inhibidores , Histona Demetilasas/genética , Histona Demetilasas/metabolismo , Humanos , Concentración 50 Inhibidora , Péptidos/análisis , Péptidos/química , Propilaminas/química , Propilaminas/metabolismo , Unión Proteica , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
16.
Bioorg Med Chem Lett ; 26(2): 545-550, 2016 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-26642767

RESUMEN

A self-immolative γ-aminopropylsulfonate linker was investigated for use in the development of prodrugs that are reactive to various chemical or biological stimuli. To demonstrate their utility, a leucine-conjugated prodrug of 5-chloroquinolin-8-ol (5-Cl-8-HQ), which is a potent inhibitor against aminopeptidase from Aeromonas proteolytica (AAP), was synthesized. The sulfonate prodrug was considerably stable under physiological conditions, with only enzyme-mediated hydrolysis of leucine triggering the subsequent intramolecular cyclization to simultaneously release 5-Cl-8-HQ and form γ-sultam. It was also confirmed that this γ-aminopropylsulfonate linker was applicable for prodrugs of not only 8-HQ derivatives but also other drugs bearing a phenolic hydroxy group.


Asunto(s)
Aeromonas/enzimología , Alcanosulfonatos/metabolismo , Aminopeptidasas/antagonistas & inhibidores , Cloroquinolinoles/metabolismo , Profármacos/metabolismo , Alcanosulfonatos/administración & dosificación , Alcanosulfonatos/síntesis química , Aminopeptidasas/metabolismo , Animales , Cloroquinolinoles/administración & dosificación , Ciclización , Humanos , Hidrólisis , Leucina/análogos & derivados , Leucina/síntesis química , Leucina/metabolismo , Hígado/metabolismo , Ratones , Profármacos/administración & dosificación , Profármacos/síntesis química , Propilaminas/síntesis química , Propilaminas/metabolismo , Ratas , Sulfonamidas/química
17.
Pharmacology ; 97(1-2): 78-83, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-26666748

RESUMEN

OBJECTIVE: The aim of this article was to assess the catalytic activities of 24 cytochrome P450 2D6 (CYP2D6) variants found in the Chinese population toward atomoxetine in vitro as well as CYP2D6.1. METHODS: In this study, the co-expression enzyme of human recombinant CYPOR, CYPb5, and CYP2D6.1 or other CYP2D6 variants with the baculovirus-mediated insect cells (Sf21) was used to study the catalytic activities of 24 CYP2D6 variants toward atomoxetine metabolism. The metabolite of atomoxetine (4-hydroxyatomoxetine) was detected by ultra-high performance liquid chromatography-mass spectrometry method. RESULTS: The intrinsic clearance (Vmax/Km) values of most variants were significantly altered when compared with CYP2D6.1. CYP2D6.94, CYP2D6.D336N, CYP2D6.R440C exhibited marked increased values 172, 126, 121% respectively. CYP2D6.89 and CYP2D6.98 exhibited similar catalytic activity as the wild type, whereas 17 variants exhibited significantly decreased values (from 5 to 87%) due to increase Km and/or decrease Vmax values. However, CYP2D6.92 and CYP2D6.96 showed no or few activity because of producing nothing. CONCLUSIONS: Our results suggest that most of these newly found variants exhibit significantly changed catalytic activities compared with the wild type. And these findings provide valuable information for the growth and development of personalized medicine in China.


Asunto(s)
Clorhidrato de Atomoxetina/farmacocinética , Citocromo P-450 CYP2D6/genética , Animales , Pueblo Asiatico , China , Cromatografía Líquida de Alta Presión , Genotipo , Humanos , Espectrometría de Masas , Fenoles/metabolismo , Propilaminas/metabolismo , Células Sf9
18.
FEBS Lett ; 589(19 Pt B): 2695-700, 2015 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-26296314

RESUMEN

The last step of polyamine catabolism involves the oxidation of 3-aminopropanal or 4-aminobutanal via aminoaldehyde dehydrogenase. In this study, two apple (Malus x domestica) AMADH genes were selected (MdAMADH1 and MdAMADH2) as candidates for encoding 4-aminobutanal dehydrogenase activity. Maximal activity and catalytic efficiency were obtained with NAD(+) and 3-aminopropanal, followed by 4-aminobutanal, at pH 9.8. NAD(+) reduction was accompanied by the production of GABA and ß-alanine, respectively, when 4-aminobutanal and 3-aminopropanal were utilized as substrates. MdAMADH2 was peroxisomal and MdAMADH1 cytosolic. These findings shed light on the potential role of apple AMADHs in 4-aminobutyrate and ß-alanine production.


Asunto(s)
Aldehído Oxidorreductasas/metabolismo , Frutas/metabolismo , Malus/enzimología , NAD/metabolismo , Poliaminas/metabolismo , beta-Alanina/biosíntesis , Ácido gamma-Aminobutírico/biosíntesis , Aldehído Oxidorreductasas/química , Aldehído Oxidorreductasas/genética , Aldehídos/metabolismo , Secuencias de Aminoácidos , Arabidopsis/citología , Arabidopsis/genética , Clonación Molecular , Secuencia Conservada , Citosol/metabolismo , Regulación de la Expresión Génica de las Plantas , Malus/genética , Malus/metabolismo , Peroxisomas/metabolismo , Filogenia , Poliaminas/química , Propilaminas/metabolismo , Transporte de Proteínas , Protoplastos/metabolismo , Especificidad por Sustrato
19.
Int J Nanomedicine ; 10: 2735-49, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25897219

RESUMEN

A hyperbranched cationic polysaccharide derivative-mediated small interfering (si)RNA interference strategy was proposed to inhibit nuclear transcription factor-kappa B (NF-κB) activation in human retinal pigment epithelial (hRPE) cells for the gene therapy of diabetic retinopathy. Two hyperbranched cationic polysaccharide derivatives containing the same amount of cationic residues, but with different branching structures and molecular weights, including 3-(dimethylamino)-1-propylamine-conjugated glycogen (DMAPA-Glyp) and amylopectin (DMAPA-Amp) derivatives, were developed for the efficient delivery of NF-κB siRNA into hRPE cells. The DMAPA-Glyp derivative showed lower toxicity against hRPE cells. Furthermore, the DMAPA-Glyp derivative more readily condensed siRNA and then formed the nanoparticles attributed to its higher branching architecture when compared to the DMAPA-Amp derivative. Both DMAPA-Glyp/siRNA and DMAPA-Amp/siRNA nanoparticles were able to protect siRNA from degradation by nuclease in 25% fetal bovine serum. The particle sizes of the DMAPA-Glyp/siRNA nanoparticles (70-120 nm) were smaller than those of the DMAPA-Amp/siRNA nanoparticles (130-180 nm) due to the higher branching architecture and lower molecular weight of the DMAPA-Glyp derivative. In addition, the zeta potentials of the DMAPA-Glyp/siRNA nanoparticles were higher than those of the DMAPA-Glyp/siRNA nanoparticles. As a result, siRNA was much more efficiently transferred into hRPE cells using the DMAPA-Glyp/siRNA nanoparticles rather than the DMAPA-Amp/siRNA nanoparticles. This led to significantly high levels of suppression on the expression levels of NF-κB p65 messenger RNA and protein in the cells transfected with DMAPA-Glyp/siRNA nanoparticles. This work provides a potential approach to promote hyperbranched polysaccharide derivatives as nonviral siRNA vectors for the inhibition of NF-κB activation in hRPE cells.


Asunto(s)
Cationes/química , Sistemas de Liberación de Medicamentos , FN-kappa B/metabolismo , Nanopartículas/química , Polisacáridos/química , ARN Interferente Pequeño/genética , Epitelio Pigmentado de la Retina/efectos de los fármacos , Animales , Bovinos , Proliferación Celular/efectos de los fármacos , Células Cultivadas , Diaminas , Humanos , FN-kappa B/administración & dosificación , Tamaño de la Partícula , Propilaminas/metabolismo , Epitelio Pigmentado de la Retina/citología , Epitelio Pigmentado de la Retina/metabolismo , Suero/química , Transfección
20.
Anal Bioanal Chem ; 407(12): 3457-70, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25711990

RESUMEN

The number of so-called new psychoactive substances (NPS) is still increasing by modification of the chemical structure of known (scheduled) drugs. As analogues of amphetamines, 2-aminopropyl-benzofurans were sold. They were consumed because of their euphoric and empathogenic effects. After the 5-(2-aminopropyl)benzofurans, the 6-(2-aminopropyl)benzofuran isomers appeared. Thus, the question arose whether the metabolic fate, the mass spectral fragmentation, and the detectability in urine are comparable or different and how an intake can be differentiated. In the present study, 6-(2-aminopropyl)benzofuran (6-APB) and its N-methyl derivative 6-MAPB (N-methyl-6-(2-aminopropyl)benzofuran) were investigated to answer these questions. The metabolites of both drugs were identified in rat urine and human liver preparations using GC-MS and/or liquid chromatography-high resolution-mass spectrometry (LC-HR-MS(n)). Besides the parent drug, the main metabolite of 6-APB was 4-carboxymethyl-3-hydroxy amphetamine and the main metabolites of 6-MAPB were 6-APB (N-demethyl metabolite) and 4-carboxymethyl-3-hydroxy methamphetamine. The cytochrome P450 (CYP) isoenzymes involved in the 6-MAPB N-demethylation were CYP1A2, CYP2D6, and CYP3A4. An intake of a common users' dose of 6-APB or 6-MAPB could be confirmed in rat urine using the authors' GC-MS and the LC-MS(n) standard urine screening approaches with the corresponding parent drugs as major target allowing their differentiation. Furthermore, a differentiation of 6-APB and 6-MAPB in urine from their positional isomers 5-APB and 5-MAPB was successfully performed after solid phase extraction and heptafluorobutyrylation by GC-MS via their retention times.


Asunto(s)
Benzofuranos/metabolismo , Benzofuranos/orina , Drogas de Diseño/farmacocinética , Espectrometría de Masas/métodos , Propilaminas/metabolismo , Propilaminas/orina , Animales , Benzofuranos/farmacocinética , Cromatografía Liquida/métodos , Citocromo P-450 CYP1A2/metabolismo , Citocromo P-450 CYP2D6/metabolismo , Citocromo P-450 CYP3A/metabolismo , Drogas de Diseño/metabolismo , Cromatografía de Gases y Espectrometría de Masas/métodos , Humanos , Inactivación Metabólica , Isomerismo , Masculino , Microsomas Hepáticos/efectos de los fármacos , Propilaminas/farmacocinética , Ratas Wistar , Extracción en Fase Sólida
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