RESUMEN
Pseudomonas is a highly diverse genus that includes species that cause disease in both plants and animals. Recently, pathogenic pseudomonads from the Pseudomonas syringae and Pseudomonas fluorescens species complexes have caused significant outbreaks in several agronomically important crops in Turkey, including tomato, citrus, artichoke and melon. We characterized 169 pathogenic Pseudomonas strains associated with recent outbreaks in Turkey via multilocus sequence analysis and whole-genome sequencing, then used comparative and evolutionary genomics to characterize putative virulence mechanisms. Most of the isolates are closely related to other plant pathogens distributed among the primary phylogroups of P. syringae, although there are significant numbers of P. fluorescens isolates, which is a species better known as a rhizosphere-inhabiting plant-growth promoter. We found that all 39 citrus blast pathogens cluster in P. syringae phylogroup 2, although strains isolated from the same host do not cluster monophyletically, with lemon, mandarin orange and sweet orange isolates all being intermixed throughout the phylogroup. In contrast, 20 tomato pith pathogens are found in two independent lineages: one in the P. syringae secondary phylogroups, and the other from the P. fluorescens species complex. These divergent pith necrosis strains lack characteristic virulence factors like the canonical tripartite type III secretion system, large effector repertoires and the ability to synthesize multiple bacterial phytotoxins, suggesting they have alternative molecular mechanisms to cause disease. These findings highlight the complex nature of host specificity among plant pathogenic pseudomonads.
Asunto(s)
Productos Agrícolas/microbiología , Genoma Bacteriano/genética , Enfermedades de las Plantas/microbiología , Pseudomonas fluorescens/genética , Pseudomonas syringae/genética , Tipificación de Secuencias Multilocus , Plantas/microbiología , Pseudomonas fluorescens/aislamiento & purificación , Pseudomonas fluorescens/patogenicidad , Pseudomonas syringae/aislamiento & purificación , Pseudomonas syringae/patogenicidad , Turquía , Sistemas de Secreción Tipo III/genética , Factores de Virulencia/genética , Secuenciación Completa del GenomaRESUMEN
BACKGROUND: Pseudomonas fluorescens (P. fluorescens) has been detected in respiratory samples from patients. However, no previous reports have been published about these P. fluorescens cultures from lung tissues. CASE PRESENTATION: Here, we report a case of pneumonia caused by P. fluorescens. P. fluorescens was identified from lung biopsy specimens for the first time in this case. According to the antibiotic susceptibility testing (AST) of P. fluorescens, the patient was given ciprofloxacin treatment. The temperature of the patient then returned to normal. Chest CT examination revealed improvements in pulmonary inflammation. CONCLUSIONS: These findings suggest that the patients with pneumonia caused by P. fluorescens should be treated in a timely manner according to the AST results.
Asunto(s)
Neumonía/tratamiento farmacológico , Neumonía/microbiología , Infecciones por Pseudomonas/tratamiento farmacológico , Pseudomonas fluorescens/aislamiento & purificación , Anciano , Antibacterianos/uso terapéutico , Ciprofloxacina/uso terapéutico , Humanos , Pulmón/patología , Masculino , Pruebas de Sensibilidad Microbiana , Infecciones por Pseudomonas/complicaciones , Tomografía Computarizada por Rayos XRESUMEN
Microbial co-inoculation strategy utilizes a combination of microbes to stimulate plant growth concomitant with an increased phytopathogen tolerance. In the present study, 15 endophytic bacterial isolates from rhizosphere and roots of wild chickpea accessions (Cicer pinnatifidum, C. judiacum, C. bijugum and C. reticulatum) were characterized for morphological, biochemical and physiological traits. Two promising isolates were identified as Pseudomonas fluorescens strain LRE-2 (KR303708.1) and Pseudomonas argentinensis LPGPR-1 (JX239745.1) based on 16S rRNA gene sequencing. Biocompatibility of selected endophytes with Mesorhizobium sp. CH1233, a standard isolate used as a national check in All India Coordinated Research Project (AICRP) was assessed to develop functional combinations capable of producing Indole acetic acid, gibberellins, siderophores and improving seed vigour (in vitro). In vivo synergistic effect of promising combinations was further evaluated under national AICRP, (Chickpea) at two different agro-climatic zones [North-West plain (Ludhiana and Hisar) and Central zones (Sehore)] for three consecutive Rabi seasons (2015-18) to elucidate their effect on symbiotic, soil quality and yield parameters. On the pooled mean basis across locations over the years, combination of Mrh+LRE-2 significantly enhanced symbiotic, soil quality traits and grain yield over Mrh alone and highly positive correlation was obtained between the nodulation traits and grain yield. Superior B: C ratio (1.12) and additional income of Rs 6,505.18 ha-1 was obtained by application of Mrh+LRE-2 over Mrh alone and un-inoculated control. The results demonstrate that dual combination of Mrh and Pseudomonas sp. from wild Cicer relatives can be exploited as a potential bio-fertilizer for increasing soil fertility and improving chickpea productivity under sustainable agriculture.
Asunto(s)
Cicer/microbiología , Fabaceae/microbiología , Fertilizantes , Mesorhizobium/fisiología , Desarrollo de la Planta , Pseudomonas fluorescens/fisiología , Agricultura , Endófitos/aislamiento & purificación , Ácidos Indolacéticos , Filogenia , Raíces de Plantas/microbiología , Pseudomonas/fisiología , Pseudomonas fluorescens/clasificación , Pseudomonas fluorescens/genética , Pseudomonas fluorescens/aislamiento & purificación , ARN Ribosómico 16S/genética , Rizosfera , Semillas/crecimiento & desarrollo , Suelo , Microbiología del Suelo , SimbiosisRESUMEN
Rhizopus species are opportunistic pathogens and cause infections which lead to deaths in individuals with the weakened immune system. Some strains of Rhizopus species have been detected to have a symbiotic relationship with bacteria. The toxicity of the Rhizopus species is important. Because strains harbouring endofungal bacteria are able to produce secondary metabolites and if endofungal bacteria are released from mycelium, serious problems can occur. We aimed to investigate the presence of endofungal bacteria in Rhizopus species isolated from food samples. Rhizopus species were isolated from different food samples. The presence of endofungal bacteria in the Rhizopus isolates was investigated. Rhizopus strains containing the endofungal bacteria were identified through phenotypic and genotypic methods. Universal primers amplifying bacterial 16S rRNA region were used to amplify 1.2-1.5-kb fragment from fungal metagenomic DNA. Sequence analysis of PCR products amplified from fungal metagenomic DNA was made. Fluorescence microscopy and scanning electron microscopy were used to visualize the presence of endofungal bacteria in fungal hyphae. According to our results, the Rhizopus strains is associated with Serratia marcescens, Pseudomonas fluorescens and Klebsiella pneumoniae. Until now there is no evidence that Pseudomonas fluorescens and Klebsiella pneumoniae were identified as endofungal. These species are opportunistic pathogen dangerous for humans. It is important for humans not only the presence of the fungi but also the presence of the endofungal bacteria in foods. Our work is important because it draws attention to the presence of endofungal bacteria in foods. Because there is danger releasing of a bacterium from the mycelium, it is likely to face sepsis or serious problems.
Asunto(s)
Hifa/fisiología , Klebsiella pneumoniae/aislamiento & purificación , Pseudomonas fluorescens/aislamiento & purificación , Rhizopus/metabolismo , Serratia marcescens/aislamiento & purificación , ADN de Hongos/genética , Microbiología de Alimentos , Humanos , Klebsiella pneumoniae/crecimiento & desarrollo , Micelio/química , Pseudomonas fluorescens/crecimiento & desarrollo , ARN Ribosómico 16S/genética , Rhizopus/genética , Serratia marcescens/crecimiento & desarrollo , SimbiosisRESUMEN
Since Pseudomonas fluorescens is the main microorganism causing severe spoilage in refrigerated aquatic products, the searching for non-antibiotic antibacterial agents effective against it continues to receive increasing interest. This study aimed to investigate the antibacterial effects and mechanisms of alkyl gallic esters against P. fluorescens isolated from the Russian sturgeon (Acipenser gueldenstaedti), as well as the effectiveness in combination with chitosan films on the preservation of sturgeon meats at 4 °C. Our data shows that the alkyl chain length plays a significant role in eliciting their antibacterial activities and octyl gallate (GAC8) exhibited an outstanding inhibitory efficacy. GAC8 can rapidly enter into the membrane lipid bilayer portion to disorder the membrane, and further inhibit the growth of the P. fluorescens through interfering both tricarboxylic acid cycle related to energy supply and amino acid metabolism associated with cell membranes, suppressing oxygen consumption and disturbing the respiration chain. Moreover, the alteration in membrane fatty acids indicated that GAC8 could disrupt the composition of cell membrane fatty acids, rendering the bacteria more sensitive to the antibacterial. The SEM results also substantiate the damage of the structure of the bacterial membrane caused by GAC8. Additionally, the edible chitosan-based films incorporated with GAC8 showed the enhanced antibacterial efficacy to remarkably extend the shelf life of Russian sturgeon. Overall, our findings not only provide new insight into the mode of action of GAC8 against P. fluorescens but also demonstrate composite films containing GAC8, as a kind of safe and antibacterial material, have a great promise for application in food preservations.
Asunto(s)
Antibacterianos/farmacología , Peces/microbiología , Conservación de Alimentos/métodos , Pseudomonas fluorescens/efectos de los fármacos , Animales , Antibacterianos/química , Membrana Celular/efectos de los fármacos , Membrana Celular/metabolismo , Quitosano/química , Quitosano/farmacología , Películas Comestibles , Metabolismo Energético/efectos de los fármacos , Ácido Gálico/análogos & derivados , Ácido Gálico/farmacología , Pseudomonas fluorescens/crecimiento & desarrollo , Pseudomonas fluorescens/aislamiento & purificación , Pseudomonas fluorescens/metabolismoRESUMEN
Dry powder inhalers (DPI) are frequently used by asthmatic patients, and the usage rate increases every year. The pharmacists at our hospital provided initial inhalation instructions on how the inhaler must be used but did not elaborate on the cleaning of the device. Therefore, the cleaning status of the inhaler is unknown, and there is a possibility of bacterial growth. This study investigated the cleaning status and hygiene of steroid drug inhalers used by elderly asthma patients. We administered a questionnaire to investigate the inhaler cleaning status after inhalation, and conducted a cross-sectional survey on hygiene using ATP measurement and bacterial culture examination. Considering the responses by 53 patients, it became clear that the ATP values of patients who answered "never cleaned" after inhalation were significantly higher than those who answered "cleaned every time". Moreover, some bacteria were detected in 62% of inhalers; 4 patients' inhalers contained bacteria other than normal oral microbial flora. In conclusion, because the inhalers used by elderly patients are in poor hygienic conditions, we must give cleaning instructions accordingly. We believe that it is necessary to give proper medical instructions along with instructions on the cleaning method with dry cloth.
Asunto(s)
Asma/tratamiento farmacológico , Inhaladores de Polvo Seco , Higiene , Nebulizadores y Vaporizadores/microbiología , Saneamiento/métodos , Saneamiento/estadística & datos numéricos , Factores de Edad , Anciano , Anciano de 80 o más Años , Estudios Transversales , Femenino , Humanos , Klebsiella pneumoniae/aislamiento & purificación , Masculino , Staphylococcus aureus Resistente a Meticilina/aislamiento & purificación , Persona de Mediana Edad , Pseudomonas fluorescens/aislamiento & purificación , Encuestas y CuestionariosRESUMEN
Biofilm formation is a frequent source of contamination of food products, which results in significant economic losses through microbial spoilage and poses serious health concerns. Little is known about the fate of Staphylococcus aureus in the dual-species biofilms with Pseudomonas fluorescens an important spoiler commonly found in aquatic products. This study evaluates the interactions between mono- or dual-species biofilms formed by P. fluorescens and S. aureus, as well as the sensitivity of the two tested strains to carvacrol. The biofilm cell population, expolysaccharide production, biofilm structures of P. fluorescens as mono- and dual-species with S. aureus at ratios of 1:1 and 1:0.01 were investigated with different concentrations of carvacrol (0, 0.4, 0.8 and 1.6 mM) in fish juice at 30 °C. The results show that the biofilm cell population of S. aureus in the dual-species was significantly lower (p < 0.05) than that in the mono-species, compared to no difference for P. fluorescens. In the co-culture the dominance of P. fluorescens inhibited the growing population of S. aureus in both planktonic and biofilm cells, however, two strains were stimulated to produce the large expolysaccharides and coaggregation, forming the complex spatial multibiofilm structures. The large increase in the dual-species biofilms was positively correlated with high quorum sensing autoinductor-2 (AI-2), and exogenous 4,5-dihydroxy-2,3-pentanedione (the AI-2 precursor, DPD), rather than C4-HSL, greatly stimulated the dual-species biofilm formation. In addition, carvacrol significantly reduced the tested biofilms and expolysaccharide secretion without affecting cell viability in a concentration-dependent manner, especially for S. aureus. Furthermore, the two strains as the dual-species biofilms exhibited lower sensitivity to carvacrol than the mono-culture, regardless of the level of inoculum of S. aureus, which was consistent with the decrease of AI-2 activity. The present study highlights that the interactions between P. fluorescens and S. aureus in dual-species biofilms promoted the large production of expolysaccharides and complex biofilm structures modulated by AI-2 signal, which results in the community-level resistance to carvacrol.
Asunto(s)
Biopelículas/efectos de los fármacos , Cimenos/farmacología , Pseudomonas fluorescens/fisiología , Staphylococcus aureus/fisiología , Animales , Farmacorresistencia Bacteriana , Matriz Extracelular de Sustancias Poliméricas/metabolismo , Peces/microbiología , Homoserina/análogos & derivados , Homoserina/metabolismo , Lactonas/metabolismo , Interacciones Microbianas , Pseudomonas fluorescens/efectos de los fármacos , Pseudomonas fluorescens/aislamiento & purificación , Percepción de Quorum/efectos de los fármacos , Alimentos Marinos/microbiología , Staphylococcus aureus/efectos de los fármacos , Staphylococcus aureus/aislamiento & purificaciónRESUMEN
AIMS: The aim of this study was to evaluate the performance of sampling methods [contact plates, sponges, and swabs] in the recovery of biofilm Listeria monocytogenes populations considering the seafood environment conditions (nature of conditioning, of materials and bacterial species). METHODS AND RESULTS: Different materials (stainless steel, polyvinyl chloride, polyurethane) were conditioned with two fish filtrates, the ready-to-eat the most consumed in Europe (smoked salmon, cod). After, we added the suspension of Listeria monocytogenes, alone or with Pseudomonas fluorescens or Carnobacterium strains, and incubated for 48 h at 8 °C. Then, the 48 h-biofilms were sampled with different methods (contact plates, sponges, and swabs). The cultivable bacterial populations were enumerated on agar, while the L. monocytogenes total and viable populations were quantified by qPCR and propidium monoazide-qPCR (PMA-qPCR), respectively. The amount of L. monocytogenes in biofilms was affected only by the nature of the conditioning with lowest adherent bacteria with cod versus with smoked salmon conditioning. Considering the amount of total population, the swab displayed the lowest values versus the sponges and the contact plates. An explanation was that the observations of the swab by microscopy showed the bacteria trapped within it. The recovery of cultivable bacterial populations was not significantly different with the three sampling methods. On the contrary, we showed that the VBNC populations were only detached by two of three methods (contact plates, sponges) while for the dead populations, those were contact plates and swabs. CONCLUSIONS: The nature of the conditioning influenced the amount of the bacteria in biofilms. And the performance of the recovery of the bacterial populations (dead, VBNC, cultivable) was dependent on the methods used. SIGNIFICANCE AND IMPACT OF THE STUDY: This study showed that the seafood environmental conditions influenced the biofilm formation and the assessment of the efficiency of cleaning and disinfectant operations could be significantly affected by the used sampling methods.
Asunto(s)
Biopelículas/crecimiento & desarrollo , Microbiología de Alimentos/métodos , Listeria monocytogenes/aislamiento & purificación , Alimentos Marinos/microbiología , Agar , Animales , Azidas/química , Carnobacterium/aislamiento & purificación , Desinfectantes/farmacología , Europa (Continente) , Peces/microbiología , Propidio/análogos & derivados , Propidio/química , Pseudomonas fluorescens/aislamiento & purificación , Acero Inoxidable/análisisRESUMEN
The silicon photomultiplier (SiPM) for low light detection has many advantages when compared to existing photon counting detectors, such as high sensitivity, low cost, robustness, and compact hardware. To facilitate the use of SiPM as a portable, field deployable device, an electrical circuit was designed consisting of an amplifier, comparator, and microcontroller. In addition, a 3D printing was used to create a portable cradle for housing the SiPM. To evaluate its detection ability, a laser experiment and bioluminescent experiments, including Pseudomonas fluorescens M3A detection, E. coli O157:H7 PhiV10nluc lysogen detection, and a luminescence-based detection of E. coli O157:H7 in ground meat using the engineered luminescent-based reporter phage PhiV10nluc, were conducted. In the same experimental setting, our previously developed smartphone-based luminometer called the bioluminescent-based analyte quantitation by smartphone and a conventional photomultiplier tube-based benchtop luminometer were used to compare detection levels and applicability for supporting luminescent phage-based pathogen detection. Results showed that the SiPM provides better performance in terms of time to detection and SNR and could be used as the light detection component of the PhiV10nluc phage-based detection format.
Asunto(s)
Técnicas Biosensibles/instrumentación , Escherichia coli O157/aislamiento & purificación , Mediciones Luminiscentes/instrumentación , Pseudomonas fluorescens/aislamiento & purificación , Carne Roja/microbiología , Animales , Técnicas Biosensibles/métodos , Calibración , Bovinos , Diseño de Equipo , Escherichia coli O157/metabolismo , Contaminación de Alimentos , Microbiología de Alimentos , Rayos Láser , Luz , Luminiscencia , Mediciones Luminiscentes/métodos , Fotones , Impresión Tridimensional , Pseudomonas fluorescens/metabolismo , Relación Señal-Ruido , Silicio , Teléfono InteligenteRESUMEN
The ready-to-eat products can be contaminated during processing by pathogen or spoilage bacteria, which persist in the industrial environment. Some bacterial species are able to form biofilms which protect them from environmental conditions. To check the bacterial contamination of the surfaces in the food industries, the professionals must regularly use surface sampling methods to detect the pathogen such as Listeria monocytogenes or the spoilage such as Pseudomonas fluorescens. In 2010, we designed and carried out a European survey to collect surface sampling information to detect or enumerate L. monocytogenes in food processing plants. A total of 137 questionnaires from 14 European Union Member States were returned. The outcome of this survey showed that the professionals preferred friction sampling methods with gauze pad, swab and sponges versus contact sampling methods. After this survey, we compared the effectiveness of these three friction sampling methods and the contact plates, as recommended in the standard EN ISO 18593 that was revised in 2018, on the recovery of L. monocytogenes and of P. fluorescens in mono-specie biofilms. This study showed no significant difference between the effectiveness of the four sampling methods to detach the viable and culturable bacterial population of theses mono-specie biofilms.
Asunto(s)
Técnicas Bacteriológicas/normas , Industria de Alimentos/métodos , Microbiología de Alimentos/métodos , Listeria monocytogenes/aislamiento & purificación , Pseudomonas fluorescens/aislamiento & purificación , Carga Bacteriana , Biopelículas , Europa (Continente) , Manipulación de AlimentosRESUMEN
Little is known about fluorescent Pseudomonas and investigations are needed to help us better understand how their species work. The aim was here to mimic what naturally occurs in environmental water containing strains isolated from mid-mountain water samples and identified as Pseudomonas fluorescens by conventional biochemical techniques. Three strains were cultured before being directly inoculated into distilled water. Surprisingly, the three cell-less extracts obtained after spinning the bacterial suspensions showed strong in vitro anti-oxidative effects against superoxide anion and hydroxyl radical but with discrepancies. The extracts obtained were found to contain antioxidant proteins among other stress proteins that were released by viable bacteria. They were identified using tandem/mass spectrometry and showed different profiles in sodium-dodecyl sulfate polyacrylamide gel electrophoresis. Bacterial identification was deepened using 16S ribonucleic acid and genome sequencing analyses to explain the differences observed between strains.
Asunto(s)
Antioxidantes/química , Pseudomonas fluorescens , Antioxidantes/análisis , Proteínas Bacterianas/análisis , Proteínas Bacterianas/química , Biodiversidad , Electroforesis en Gel de Poliacrilamida , Genes Bacterianos , Proteómica , Pseudomonas fluorescens/aislamiento & purificación , Pseudomonas fluorescens/metabolismo , ARN Ribosómico 16S , Espectrometría de Masas en Tándem , Agua/químicaRESUMEN
Heat-stable peptidases released in refrigerated raw milk by psychrotrophic bacteria are responsible for UHT milk gelation. K-casein-derived caseinomacropeptides, identified by mass spectrometry, were constantly detected in gelled milk by capillary electrophoresis. Strains of Pseudomonas fluorescens, Ps. poae and Chryseobacterium joostei, selected among aprX-positive strains from raw milk, were incubated in milk up to 6â¯days at 4⯰C before sterilization (98⯰C/4â¯min). Samples were then stored at 25 or 40⯰C, visually observed for gelation, and analysed for presence of caseinomacropeptides throughout 90â¯days of storage. Depending on cold pre-incubation time, caseinomacropeptides accumulated well before gelation onset in milk stored at 25⯰C. Caseinomacropeptides were successively degraded, especially in milk stored at 40⯰C, due to extensive proteolysis, and an abundant sediment developed instead of a gel. The caseinomacropeptides are here presented as an early indicator of UHT milk gelation and a mechanism explaining this phenomenon is proposed.
Asunto(s)
Caseínas/metabolismo , Geles/química , Leche/metabolismo , Pseudomonas fluorescens/fisiología , Animales , Caseínas/análisis , Caseínas/química , Cromatografía Líquida de Alta Presión , Leche/microbiología , Fragmentos de Péptidos/análisis , Fragmentos de Péptidos/metabolismo , Péptido Hidrolasas/metabolismo , Proteolisis , Pseudomonas fluorescens/aislamiento & purificación , Espectrometría de Masas en Tándem , TemperaturaRESUMEN
Aim: This research pioneers the process of obtaining information concerning the distribution and existence of seven ESBL genes linked to Pseudomonas, three virulence and five quorum sensing separated from 100 camel meat samples using PCR. Materials & methods: The Vitek system was used to identify Pseudomonas species. Phenotypic antibiotic resistance of 16 antibiotics was tested by disc diffusion. Quantification of pyocyanin, elastase, alkaline protease, biofilm and Vero cell cytotoxicity was also implemented. Results: The total number of Pseudomonas species isolated from camel meat was 10/100 identified as Pseudomonas aeruginosa 8/10, Pseudomonas fluorescens 2/10. The isolates were multidrug resistant and were resistant to four to eight antibiotics representing four to six classes. The 15 genes exhibited a huge diversity in their association. Conclusion: The results indicated that camel meat is an unpropitious hotbed for Pseudomonas species of clinical significance.
Asunto(s)
Biopelículas/crecimiento & desarrollo , Farmacorresistencia Bacteriana Múltiple/genética , Carne/microbiología , Infecciones por Pseudomonas/microbiología , Infecciones por Pseudomonas/veterinaria , Pseudomonas/efectos de los fármacos , Pseudomonas/genética , Percepción de Quorum/genética , Factores de Virulencia/genética , Animales , Antibacterianos/farmacología , Proteínas Bacterianas , Camelus , Chlorocebus aethiops , Pruebas Antimicrobianas de Difusión por Disco , Farmacorresistencia Bacteriana Múltiple/efectos de los fármacos , Egipto/epidemiología , Endopeptidasas , Microbiología de Alimentos , Genes Bacterianos/genética , Elastasa Pancreática , Reacción en Cadena de la Polimerasa/métodos , Pseudomonas/clasificación , Pseudomonas/aislamiento & purificación , Infecciones por Pseudomonas/epidemiología , Pseudomonas aeruginosa/efectos de los fármacos , Pseudomonas aeruginosa/aislamiento & purificación , Pseudomonas fluorescens/efectos de los fármacos , Pseudomonas fluorescens/aislamiento & purificación , Piocianina , Células Vero , Virulencia/genética , beta-Lactamasas/genéticaRESUMEN
The present study was aimed to investigate the effects of plant growth promoting rhizobacteria (PGPR) and plant growth regulators (PGRs) on the physiology and yield of wheat grown in less fertile sandy soil. The isolated PGPR strains were identified by 16S-rRNA gene sequencing as Planomicrobium chinense (P1), Bacillus cereus (P2) and Pseudomonas fluorescens (P3). Wheat varieties (Galaxy-13 and Pak-2013) differing in sensitivity to drought were soaked in fresh cultures of bacterial isolates and the PGRs (salicylic acid and putrescine) were sprayed at 150 mg/L on seedlings at three leaf stage. PGPR and PGRs treated plants showed significant increase in the contents of chlorophyll, sugar and protein even under harsh environmental conditions. Drought stress enhanced the production of proline, antioxidant enzymes and lipid peroxidation but a decrease was noted in the biochemical content (i.e. chlorophyll, protein and sugar) of inoculated plants. PGPR inoculation also significantly enhanced the yield parameters (i.e. plant height, spike length, grain yield and weight) and improved the fertility status of sandy soil. The accumulation of macronutrient, total NO3-N and P concentration and soil moisture content of rhizosphere soil was also enhanced by PGPRs inoculation. It is concluded that the combined effects of PGPR and PGRs have profound effects on the biochemical responses and drought tolerance of wheat grown in sandy soils.
Asunto(s)
Bacillus cereus/aislamiento & purificación , Planococcaceae/fisiología , Reguladores del Crecimiento de las Plantas/farmacología , Pseudomonas fluorescens/fisiología , Triticum/microbiología , Bacillus cereus/genética , Clorofila/metabolismo , Sequías , Planococcaceae/genética , Planococcaceae/aislamiento & purificación , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Raíces de Plantas/microbiología , Pseudomonas fluorescens/genética , Pseudomonas fluorescens/aislamiento & purificación , Putrescina/farmacología , Ácido Salicílico/farmacología , Plantones/crecimiento & desarrollo , Plantones/metabolismo , Plantones/microbiología , Suelo/química , Microbiología del Suelo , Triticum/efectos de los fármacos , Triticum/crecimiento & desarrollo , Triticum/metabolismoRESUMEN
Host-associated bacteria can have both beneficial and detrimental effects on host health. While some of the molecular mechanisms that determine these outcomes are known, little is known about the evolutionary histories of pathogenic or mutualistic lifestyles. Using the model plant Arabidopsis, we found that closely related strains within the Pseudomonas fluorescens species complex promote plant growth and occasionally cause disease. To elucidate the genetic basis of the transition between commensalism and pathogenesis, we developed a computational pipeline and identified genomic islands that correlate with outcomes for plant health. One island containing genes for lipopeptide biosynthesis and quorum-sensing is required for pathogenesis. Conservation of the quorum-sensing machinery in this island allows pathogenic strains to eavesdrop on quorum signals in the environment and coordinate pathogenic behavior. We found that genomic loci associated with both pathogenic and commensal lifestyles were convergently gained and lost in multiple lineages through homologous recombination, possibly constituting an early step in the differentiation of pathogenic and commensal lifestyles. Collectively this work provides novel insights into the evolution of commensal and pathogenic lifestyles within a single clade of host-associated bacteria.
Asunto(s)
Islas Genómicas , Plantas/microbiología , Pseudomonas fluorescens/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Genoma Bacteriano , Genómica , Pseudomonas fluorescens/aislamiento & purificación , Pseudomonas fluorescens/fisiología , Percepción de Quorum , SimbiosisRESUMEN
Banana is the second largest export crop in Colombia. To meet the demand of international markets, high amounts of chemical fertilizers are required, which represent high costs and can be hazardous to the environment. Plant growth promoting rhizobacteria (PGPR) can, at least partially, replace chemical fertilizers. In this paper, we evaluated the effect of nine PGPR of the genera Bacillus and Pseudomonas on banana growth. Banana seedlings were produced through tissue culture and acclimatized in the greenhouse core. Plants were inoculated with the rhizobacteria and growth parameters (plant height, leaf number, leaf area, pseudostem thickness, root and shoot fresh weight, root and shoot dry weight) were assessed after 55 days. The two best performing PGPR, Bs006 and Ps006 previously identified as Bacillus amyloliquefaciens and Pseudomonas fluorescens, respectively, promoted banana growth similarly or even slightly superior to 100% chemical fertilization, and were selected for further characterization of root colonization by both eletron microscopy and confocal microscopy of fluorescence in situ hybridization (FISH)-stained root tissues. Both P. fluorescens Ps006 and B. amyloquifaciens Bs006 showed ability to colonize banana roots, but Bs006 appeared faster than Ps006 in the colonization dynamics. This work demonstrated that inoculation of rhizobacteria Bacillus amyloliquefaciens Bs006 and Pseudomonas fluorescens Ps006 could partially replace the chemical fertilization of tissue cultured banana plants, and therefore could be used for the formulation of a new biofertilizer.
Asunto(s)
Bacillus amyloliquefaciens/fisiología , Musa/crecimiento & desarrollo , Musa/microbiología , Desarrollo de la Planta , Raíces de Plantas/microbiología , Pseudomonas fluorescens/fisiología , Bacillus amyloliquefaciens/genética , Bacillus amyloliquefaciens/aislamiento & purificación , Colombia , Fertilizantes , Hibridación Fluorescente in Situ , Microscopía Electrónica de Rastreo , Hojas de la Planta/crecimiento & desarrollo , Pseudomonas fluorescens/genética , Pseudomonas fluorescens/aislamiento & purificación , Plantones , Suelo/química , Microbiología del SueloRESUMEN
Atmospheric cold plasma (ACP) offers great potential for decontamination of food borne pathogens. This study examined the antimicrobial efficacy of ACP against a range of pathogens of concern to fresh produce comparing planktonic cultures, monoculture biofilms (Escherichia coli, Salmonella enterica, Listeria monocytogenes, Pseudomonas fluorescens) and mixed culture biofilms (Listeria monocytogenes and Pseudomonas fluorescens). Biotic and abiotic surfaces commonly occurring in the fresh food industry were investigated. Microorganisms showed varying susceptibility to ACP treatment depending on target and process factors. Bacterial biofilm populations treated with high voltage (80â¯kV) ACP were reduced significantly (pâ¯<â¯0.05) in both mono- and mixed species biofilms after 60â¯s of treatment and yielded non-detectable levels after extending treatment time to 120â¯s. However, an extended time was required to reduce the challenge mixed culture biofilm of L. monocytogenes and P. fluorescens inoculated on lettuce, which was dependent on biofilm formation conditions and substrate. Contained treatment for 120â¯s reduced L. monocytogenes and P. fluorescens inoculated as mixed cultures on lettuce (pâ¯<â¯0.05) by 2.2 and 4.2 Log10 CFU/ml respectively. When biofilms were grown at 4⯰C on lettuce, there was an increased resistance to ACP treatment by comparison with biofilm grown at temperature abuse conditions of 15⯰C. Similarly, L. monocytogenes and P. fluorescens exposed to cold stress (4⯰C) for 1â¯h demonstrated increased tolerance to ACP treatment compared to non-stressed cells. These finding demonstrates that bacterial form, mono versus mixed challenges as well as environmental stress conditions play an important role in ACP inactivation efficacy.
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Biopelículas/efectos de los fármacos , Contaminación de Alimentos/análisis , Microbiología de Alimentos , Lactuca/microbiología , Frío , Recuento de Colonia Microbiana , Productos Agrícolas/microbiología , Escherichia coli/efectos de los fármacos , Escherichia coli/aislamiento & purificación , Listeria monocytogenes/efectos de los fármacos , Listeria monocytogenes/aislamiento & purificación , Gases em Plasma/farmacología , Pseudomonas fluorescens/efectos de los fármacos , Pseudomonas fluorescens/aislamiento & purificaciónRESUMEN
Wild animals may be considered important reservoirs for bacterial pathogens and, consequently, possible sources of infection for humans. In this study, selected multidrug-resistant bacteria (Acinetobacter spp., Aeromonas salmonicida, Klebsiella pneumoniae, Pseudomonas fluorescens and Shewanella putrefaciens) isolated from wild animals were characterized on their ability to attach and invade/internalize human colonic carcinoma (Caco-2) cells. In addition, the viability of these bacteria to survive under simulated human gastrointestinal tract conditions as well as the production of virulence factors (homoserine lactones signal molecules, gelatinases, proteases, siderophores and biofilm formation) were studied. The results suggests that all the bacteria presented the capacity to attach and internalize into Caco-2â¯cells. A. salmonicida and P. fluorescens exhibited the highest ability to internalize. These bacteria were also found to be the highest proteases producers. A. salmonicida and K. pneumoniae survived under simulated human gastrointestinal conditions. These were the bacteria with the highest capacity to produce biofilms. K. pneumoniae was the only bacterium producing siderophores. Taken together, the present results reinforce the need for the "One Health" initiative, underscoring the environment and the animals as important reservoirs of infectious determinants.
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Adhesinas Bacterianas , Animales Salvajes/microbiología , Bacterias/aislamiento & purificación , Bacterias/patogenicidad , Células CACO-2/microbiología , Farmacorresistencia Bacteriana Múltiple/fisiología , 4-Butirolactona/análogos & derivados , 4-Butirolactona/metabolismo , Acinetobacter/aislamiento & purificación , Acinetobacter/patogenicidad , Aeromonas salmonicida/aislamiento & purificación , Aeromonas salmonicida/patogenicidad , Animales , Bacterias/genética , Biopelículas/crecimiento & desarrollo , Girasa de ADN/genética , Heces/microbiología , Tracto Gastrointestinal/microbiología , Gelatinasas/metabolismo , Humanos , Klebsiella pneumoniae/aislamiento & purificación , Klebsiella pneumoniae/patogenicidad , Péptido Hidrolasas/metabolismo , Pseudomonas fluorescens/aislamiento & purificación , Pseudomonas fluorescens/patogenicidad , ARN Ribosómico 16S/genética , Shewanella putrefaciens/aislamiento & purificación , Shewanella putrefaciens/patogenicidad , Sideróforos/metabolismo , Virulencia , Factores de Virulencia/metabolismoRESUMEN
Cocoyam (Xanthosoma sagittifolium (L.)), an important tuber crop in the tropics, is severely affected by the cocoyam root rot disease (CRRD) caused by Pythium myriotylum. The white cocoyam genotype is very susceptible while the red cocoyam has some field tolerance to CRRD. Fluorescent Pseudomonas isolates obtained from the rhizosphere of healthy red and white cocoyams from three different fields in Cameroon were taxonomically characterized. The cocoyam rhizosphere was enriched with P. fluorescens complex and P. putida isolates independent of the plant genotype. LC-MS and NMR analyses revealed that 50% of the Pseudomonas isolates produced cyclic lipopeptides (CLPs) including entolysin, lokisin, WLIP, putisolvin and xantholysin together with eight novel CLPs. In general, CLP types were linked to specific taxonomic groups within the fluorescent pseudomonads. Representative CLP-producing bacteria showed effective control against CRRD while purified CLPs caused hyphal branching or hyphal leakage in P. myriotylum. The structure of cocoyamide A, a CLP which is predominantly produced by P. koreensis group isolates within the P. fluorescens complex is described. Compared with the white cocoyam, the red cocoyam rhizosphere appeared to support a more diverse CLP spectrum. It remains to be investigated whether this contributes to the field tolerance displayed by the red cocoyam.
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Proteínas Bacterianas/genética , Lipopéptidos/genética , Péptidos Cíclicos/genética , Pseudomonas fluorescens/genética , Xanthosoma/microbiología , Fluorescencia , Variación Genética , Pseudomonas fluorescens/aislamiento & purificación , Pythium , RizosferaRESUMEN
Numerous microbes reside in the rhizosphere having plant growth promoting activity, and enhancing the property by increasing plant yield. Plant growth promoting rhizobacteria (PGPR) has gradually increased in agriculture and offers an attractive way to replace chemical fertilizers, pesticides and supplements. Soil was collected from the rhizosphere of an agricultural farm and the psychrotrophic bacterial strains STA3 (KY888133) and RM2 (KY888134) were successfully isolated, and screened on the basis of phosphate solubilization. Further characterization was carried out by morphological, biochemical, and 16S rDNA characterization methods. The unique nature of psychrotrophic Pentoea ananatis and a suitable combination with Pseudomonas fluorescens regarding plant growth promotion activity has not been studied before to our knowledge. An assessment of various parameters of plant growth promoting activity, such as IAA, phosphate solubilization, bio-control activity, HCN and siderophore production, has been carried out. Both strains were found to be positive in various parameters except HCN and Biocontrol activity, which were positive only for the strain RM2. Also, shelf life and their efficacy was determined before and after formulation. A great consistency was observed in all the cultures, even after 70 days of storage under bio-formulation at room temperature, while in the case of the co-culture CPP-2, the cfu ml-1 was greater, followed by RM2 and STA3. Moreover, the growth indices of the pea plant were found to be better in the co-culture CPP-2 compared with individual strains, followed by RM2 and STA3. Thus, the study suggests that the co-culture CPP-2 has a great potential for plant growth promotion as compared with individual strains followed by RM2 and STA3.