HO-CR and HOLL-CR: new forms of winter oilseed rape (Brassica napus L.) with altered fatty acid composition and resistance to selected pathotypes of Plasmodiophora brassicae (clubroot).

The priority in oilseed rape (Brassica napus L.) research and breeding programs worldwide is to combine different features to develop cultivars tailored to specific applications of this crop. In this study, forms with a modified fatty acid composition of seed oil were successfully combined with a source of resistance to Plasmodiophora brassicae Wor., a harmful protist-causing clubroot. Three HO-type recombinants in F6-F12 generations with oleic acid content of 80.2-82.1% and one HOLL-type F6 inbred mutant recombinant (HOmut × LLmut), with a high oleic acid content (80.9%) and reduced linolenic acid content (2.3%), were crossed with the cultivar Tosca, resistant to several pathotypes of P. brassicae. The work involved genotyping with the use of DNA markers specific for allelic variants of desaturase genes responsible for the synthesis of oleic and linolenic fatty acids, CAPS (FAD2 desaturase, C18:1), and SNaPshot (FAD3 desaturase, C18:3), respectively. Of 350 progenies in the F3 generation, 192 (55%) were selected for further studies. Among them, 80 HO (≥ 72%) lines were identified, 10 of which showed resistance to at least one up to four P. brassicae pathotypes. Thirty lines in the selected progeny contained high oleic acid and less than 5% linolenic acid; eight of them belonged to the HOLL type conferring resistance to at least one pathotype. Two HO lines and two HOLL lines were resistant to four pathotypes. The resulting HO-CR and HOLL-CR inbred lines with altered seed oil fatty acid composition and resistance to P. brassicae represent unique oilseed rape material with the desired combination of valuable traits.

Management of Soybean Cyst Nematode and Sudden Death Syndrome with Nematode-Protectant Seed Treatments Across Multiple Environments in Soybean.

As soybean (Glycine max) production continues to expand in the United States and Canada, so do pathogens and pests that directly threaten soybean yield potential and economic returns for farmers. One such pathogen is the soybean cyst nematode (SCN; Heterodera glycines). SCN has traditionally been managed using SCN-resistant cultivars and rotation with nonhost crops, but the interaction of SCN with sudden death syndrome (SDS; caused by Fusarium virguliforme) in the field makes management more difficult. Nematode-protectant seed treatments have become options for SCN and SDS management. The objectives of this study were to evaluate nematode-protectant seed treatments for their effects on (i) early and full season SCN reproduction, (ii) foliar symptoms and root-rot caused by SDS, and (iii) soybean yield across environments accounting for the above factors. Using a standard protocol, field trials were implemented in 13 states and one Canadian province from 2019 to 2021 constituting 51 site-years. Six nematode-protectant seed treatment products were compared with a fungicide + insecticide base treatment and a nontreated check. Initial (at soybean planting) and final (at soybean harvest) SCN egg populations were enumerated, and SCN females were extracted from roots and counted at 30 to 35 days postplanting. Foliar disease index (FDX) and root rot caused by the SDS pathogen were evaluated, and yield data were collected for each plot. No seed treatment offered significant nematode control versus the nontreated check for in-season and full-season nematode response, no matter the initial SCN population or FDX level. Of all treatments, ILEVO (fluopyram) and Saltro (pydiflumetofen) provided more consistent increases in yield over the nontreated check in a broader range of SCN environments, even when FDX level was high.

Frugivorous birds disperse seeds of Ligustrum lucidum, seed-feeding weevils, and parasitic wasps of weevils via endozoochory.

Seed dispersal by frugivorous birds is a famous plant-animal interaction. However, we demonstrated that frugivorous birds can disperse seeds of Ligustrum lucidum, and its seed parasite weevils and the parasitic wasps from the weevils in this study. The cryptic tetrad of Ligustrum-disperser-weevil-wasp may be an overlooked phenomenon in seed dispersal syndrome.

Identificación molecular y diversidad genética de las especies de nematodos Globodera rostochiensis y G. pallida en regiones productoras de papa de Guatemala / Molecular identification and genetic diversity of the species of nematodesGlobodera rostochiensisandG. pallidain potato growing regions of Guatemala

En Guatemala, la producción del cultivo de papa se ve afectada por los nematodos Globodera rostochiensis y Globo-dera pallida. La capacidad de ambas especies para formar quistes complica su control y provoca el aumento de sus poblaciones. En Guatemala se reporta la presencia de ambas especies de nematodos por identificación morfológica, sin embargo, no se ha realizado una confirmación molecular. Este es el primer estudio para validar la presencia de ambas especies de nematodos por PCR múltiple y la determinación de la diversidad y estructura genética de las poblaciones utilizando marcadores moleculares. Se realizaron muestreos en cuatro departamentos productores de papa del país. La identificación por PCR se realizó con el cebador común ITS5 y los cebadores PITSr3 específico para G. rostochiensisy PITSp4 para G. pallida. La caracterización molecular se realizó con el marcador AFLP. Se confirmó la presencia de las dos especies de nematodos en los cuatro departamentos. Los índices de diversidad Shannon y heterocigosidad esperada revelaron mayor diversidad genética en G. rostochiensis (H = 0.311, He = 0.301) que en G. pallida (H = 0.035, He = 0.223). Los métodos NJ, DAPC y PCA exhibieron una débil estructura entre las poblaciones de ambas especies de nematodos. Los resultados sugieren un patrón de dispersión desde Quetzaltenango hacia el resto del país, atribuido a la comercialización de semilla contaminada con nematodos. Se sugiere promover programas de socialización sobre los beneficios del uso de semilla certificada, además de constantes monitoreos moleculares para un diagnóstico certero de ambas especies de nematodos.

In Guatemala, potato crop production is affected by the nematodes Globodera rostochiensis and Globodera pallida. The ability of both species to form cysts complicates their control and causes an increase in their populations. In Guatemala, both species of nematodes have been reported by morphological identification; however, molecular confirmation has not been carried out. It is the first study to validate the presence of both nematode species by multiplex PCR and determine the diversity and genetic structure of the populations using molecular markers. Sampling was carried out in four pota-to-producing departments of the country. PCR identification was performed with the common primer ITS5 and the primers PITSr3 specific for G. rostochiensis and PITSp4 for G. pallida. We performed molecular characterization with the AFLP marker. We confirmed the presence of the two nematode species in the four departments. Shannon diversity and expected heterozygosity indices revealed higher genetic diversity in G. rostochiensis (H = 0.311, He = 0.301) than in G. pallida (H = 0.035, He = 0.223). The NJ, DAPC, and PCA methods exhibited weak structure among populations of both nematode species. The results suggest a dispersal pattern from Quetzaltenango to the rest of the country, attributed to the commer-cialization of seed contaminated with nematodes. We suggest promoting socialization programs on the benefits of using certified seeds and constant molecular monitoring for an accurate diagnosis of both species of nematodes.

Effects of variety, storage container, and duration on the physical properties, oil content, germination capacity, and seed loss due to Plodia interpunctella infestation of Ethiopian sesame.

BACKGROUND: Owing to fluctuations of international market prices and excess supply during peak harvesting seasons, farmers and traders often suffer from a low market price of sesame. Such a negative impact can be ameliorated by taking advantage of times with a better market price during the off season. This study aimed to investigate the impact of different storage containers on gravimetric properties and germination capacities of five different sesame varieties as well as their impact on Indian meal moth (Plodia interpunctella). RESULTS: There were differences among the types of storage containers in terms of moisture content, oil content, thousand seed weight, and germination capacity with the storage duration. However, in terms of bulk density, true density, and porosity, the results were consistent. On average, a few losses in thousand seed weight for varieties stored in Purdue Improved Crop Storage bags (1.7%), metal silos (2.4%), and GrainPro bags (3.4%) were observed during 12 months' storage compared with polypropylene bags (17%). The difference among sesame varieties in terms of weight loss and loss of webbing due to P. interpunctella varied with storage duration. On average, about 9.4% weight loss and 5.7% loss due to webbing was measured for seed stored in polypropylene bags due to the natural infestation of P. interpunctella. No pest was found in hermetic containers. CONCLUSION: In general, to fetch better market prices, the use of hermetic storage is more efficient to maintain the desired gravimetric properties and to prevent losses due to P. interpunctella infestation compared with the commonly used woven polypropylene bags. © 2020 Society of Chemical Industry.

Disinfestation techniques for major cereals: A status report.

Management of stored product insects is a major concern and widely researched topic in the food and grain processing and storage industry. In the scenario of estimated utilization of produces exceeding the production, postharvest losses should be properly controlled to feed the growing population. The prevailing disinfestation techniques are forced to meet regulatory standards and market demands. The resistance developed by insects, environmental concerns, and occupational hazards lead to the vanishing of many chemicals used in insect and pest management programs. Some of the major disinfestation techniques such as the use of chemical fumigants, ozone, irradiation, dielectric heating, extreme temperature treatments, and bio rational approaches are discussed, particularly on the storage of cereal grains and its products, as they contribute to a significant proportion of food consumed worldwide. Newer techniques such as nonthermal plasma and metabolic stress disinfestation and decontamination for stored pest control are developed and evaluated in different parts of the world. The knowledge about the mode of action of these disinfestation techniques is important to avoid the cross-resistance and multiple resistance developed by insects with frequently used techniques. Various alternatives to conventional fumigants are discussed in this review as there is a growing demand for toxic-free, environment-friendly, and, at the same time, efficient techniques.

Mapping QTL hotspots associated with weed competitive traits in backcross population derived from Oryza sativa L. and O. glaberrima Steud.

To improve grain yield under direct seeded and aerobic conditions, weed competitive ability of a rice genotype is a key desirable trait. Hence, understanding and dissecting weed competitive associated traits at both morphological and molecular level is important in developing weed competitive varieties. In the present investigation, the QTLs associated with weed competitive traits were identified in BC1F2:3 population derived from weed competitive accession of O. glaberrima (IRGC105187) and O. sativa cultivar IR64. The mapping population consisting of 144 segregating lines were phenotyped for 33 weed competitive associated traits under direct seeded condition. Genetic analysis of weed competitive traits carried out in BC1F2:3 population showed significant variation for the weed competitive traits and predominance of additive gene action. The population was genotyped with 81 genome wide SSR markers and a linkage map covering 1423 cM was constructed. Composite interval mapping analysis identified 72 QTLs linked to 33 weed competitive traits which were spread on the 11 chromosomes. Among 72 QTLs, 59 were found to be major QTLs (> 10% PVE). Of the 59 major QTLs, 38 had favourable allele contributed from the O. glaberrima parent. We also observed nine QTL hotspots for weed competitive traits (qWCA2a, qWCA2b, qWCA2c, qWCA3, qWCA5, qWCA7, qWCA8, qWCA9, and qWCA10) wherein several QTLs co-localised. Our study demonstrates O. glaberrima species as potential source for improvement for weed competitive traits in rice and identified QTLs hotspots associated with weed competitive traits.

Can multitrophic interactions shape morphometry, allometry, and fluctuating asymmetry of seed-feeding insects?

Body size is commonly associated with biological features such as reproductive capacity, competition, and resource acquisition. Many studies have tried to understand how these isolated factors can affect the body pattern of individuals. However, little is known about how interactions among species in multitrophic communities determine the body shape of individuals exploiting the same resource. Here, we evaluate the effect of fruit infestation, parasitism rate, and seed biomass on size, allometric and asymmetric patterns of morphological structures of insects that exploit the same resource. To test it, we measured 750 individuals associated with the plant Senegalia tenuifolia (Fabaceae), previously collected over three consecutive years. Negative allometry was maintained for all species, suggesting that with increasing body size the body structure did not grow proportionally. Despite this, some variations in allometric slopes suggest that interactions in a multitrophic food web can shape the development of these species. Also, we observed a higher confidence interval at higher categories of infestation and parasitism rate, suggesting a great variability in the allometric scaling. We did not observe fluctuating asymmetry for any category or species, but we found some changes in morphological structures, depending on the variables tested. These findings show that both allometry and morphological trait measurements are the most indicated in studies focused on interactions and morphometry. Finally, we show that, except for the fluctuating asymmetry, each species and morphological structure respond differently to interactions, even if the individuals play the same functional role within the food web.

Understanding the potential impact of continued seed treatment use for resistance management in Cry51Aa2.834_16 Bt cotton against Frankliniella fusca.

Transgenic cotton expressing Cry51Aa2.834_16 Bt toxin (hereafter referred to as MON 88702) has the potential to be an important tool for pest management due to its unique activity against tobacco thrips, Frankliniella fusca. Unlike other Bt toxins targeting lepidopteran cotton pests, MON 88702 does not cause direct mortality but has an antixenotic effect that suppresses F. fusca oviposition. Previous work has shown neonicotinoid seed treated (NST) crops have similar behavioral effects on thrips. This study used non-choice and common garden experiments to examine how the presence of MON 88702 cotton and soybean (another F. fusca host) with and without NSTs might alter F. fusca infestation distributions. In a no-choice environment, significant larval establishment differences were observed, with untreated soybean plants becoming most heavily infested. In choice experiments, plants expressing MON 88702 or were neonicotinoid treated had significantly lower larval establishment. Larval density decreased as dispersal distance increased, suggesting reproductive decisions were negatively related to distance from the release point. Understanding how F. fusca responds to MON 88702 in an environment where adults can choose among multiple host plants will provide valuable context for projections regarding design of MON 88702 resistance refuges. Reduced larval establishment on NST cotton and soybean suggests that area-wide use of NSTs could reduce the number of susceptible F. fusca generated in unstructured crop refuges for MON 88702. These results also suggest that although the presence of NST MON 88702 could suppress reproduction and resistance selection, over time this benefit could erode resulting in increased larval establishment on NST cotton and soybean due to increased frequency of neonicotinoid resistant F. fusca populations.

Digestive activity and organic compounds of Nezara viridula watery saliva induce defensive soybean seed responses.

The stink bug Nezara viridula is one of the most threatening pests for agriculture in North and South America, and its oral secretion may be responsible for the damage it causes in soybean (Glycine max) crop. The high level of injury to seeds caused by pentatomids is related to their feeding behavior, morphology of mouth parts, and saliva, though information on the specific composition of the oral secretion is scarce. Field studies were conducted to evaluate the biochemical damage produced by herbivory to developing soybean seeds. We measured metabolites and proteins to profile the insect saliva in order to understand the dynamics of soybean-herbivore interactions. We describe the mouth parts of N. viridula and the presence of metabolites, proteins and active enzymes in the watery saliva that could be involved in seed cell wall modification, thus triggering plant defenses against herbivory. We did not detect proteins from bacteria, yeasts, or soybean in the oral secretion after feeding. These results suggest that the digestive activity and organic compounds of watery saliva may elicit a plant self-protection response. This study adds to our understanding of stink bug saliva plasticity and its role in the struggle against soybean defenses.

Testing methods and statistical models of genomic prediction for quantitative disease resistance to Phytophthora sojae in soybean [Glycine max (L.) Merr] germplasm collections.

KEY MESSAGE: Genomic prediction of quantitative resistance toward Phytophthora sojae indicated that genomic selection may increase breeding efficiency. Statistical model and marker set had minimal effect on genomic prediction with > 1000 markers. Quantitative disease resistance (QDR) toward Phytophthora sojae in soybean is a complex trait controlled by many small-effect loci throughout the genome. Along with the technical and rate-limiting challenges of phenotyping resistance to a root pathogen, the trait complexity can limit breeding efficiency. However, the application of genomic prediction to traits with complex genetic architecture, such as QDR toward P. sojae, is likely to improve breeding efficiency. We provide a novel example of genomic prediction by measuring QDR to P. sojae in two diverse panels of more than 450 plant introductions (PIs) that had previously been genotyped with the SoySNP50K chip. This research was completed in a collection of diverse germplasm and contributes to both an initial assessment of genomic prediction performance and characterization of the soybean germplasm collection. We tested six statistical models used for genomic prediction including Bayesian Ridge Regression; Bayesian LASSO; Bayes A, B, C; and reproducing kernel Hilbert spaces. We also tested how the number and distribution of SNPs included in genomic prediction altered predictive ability by varying the number of markers from less than 50 to more than 34,000 SNPs, including SNPs based on sequential sampling, random sampling, or selections from association analyses. Predictive ability was relatively independent of statistical model and marker distribution, with a diminishing return when more than 1000 SNPs were included in genomic prediction. This work estimated relative efficiency per breeding cycle between 0.57 and 0.83, which may improve the genetic gain for P. sojae QDR in soybean breeding programs.

Identification of a candidate gene associated with isoflavone content in soybean seeds using genome-wide association and linkage mapping.

Isoflavone, a secondary metabolite produced by Glycine max (L.) Merr. (soybean), is valuable for human and plant health. The genetic architecture of soybean isoflavone content remains unclear, however, despite several mapping studies. We generated genomic data for 200 soybean cultivars and 150 recombinant inbred lines (RILs) to localize putative loci associated with soybean seed isoflavone content. Using a genome-wide association study (GWAS), we identified 87 single-nucleotide polymorphisms (SNPs) that were significantly associated with isoflavone concentration. Using linkage mapping, we identified 37 quantitative trait loci (QTLs) underlying the content of four isoflavones found in the RILs. A major locus on chromosome 8 (qISO8-1) was co-located by both the GWAS and linkage mapping. qISO8-1 was fine mapped to a 99.5-kb region, flanked by SSR_08_1651 and SSR_08_1656, in a BC2 F5 population. GmMPK1, encoding a mitogen-activated protein kinase, was identified as the causal gene in qISO8-1, and two natural GmMPK1 polymorphisms were significantly associated with isoflavone content. Overexpression of GmMPK1 in soybean hairy roots resulted in increased isoflavone concentrations. Overexpressing GmMPK1 in transgenic soybeans had greater resistance to Phytophthora root rot, suggesting that GmMPK1 might increase soybean resistance to biotic stress by influencing isoflavone content. Our results not only increase our understanding of the genetic architecture of soybean seed isoflavone content, but also provide a framework for the future marker-assisted breeding of high isoflavone content in soybean cultivars.

Constituents Leached by Tomato Seeds Regulate the Behavior of Root-Knot Nematodes and Their Antifungal Effects against Seed-Borne Fungi.

Germinating seeds can release diverse phytochemicals that repel, inhibit, or kill pathogens such as root-knot nematodes and seed-borne fungi. However, little is known about the composition of these phytochemicals and their effects on pathogens. In this study, we demonstrated that tomato seed exudates can attract the nematode Meloidogyne incognita using a dual-choice assay. Eighteen compounds were then isolated and identified from the exudates. Of these, esters (1-3), fatty acids (4-6), and phenolic acids (10-12) were proven to be the signaling molecules that facilitated the host-seeking process of second-stage juveniles (J2s) of nematodes, while alkaloids (17 and 18) disrupted J2s in locating their host. Furthermore, some phenolic acids and alkaloids showed antifungal effects against seed-borne fungi. In particular, ferulic acid (12) showed obvious activity against Aspergillus flavus (minimum inhibitory concentration (MIC), 32 µg/mL), while dihydrocapsaicin (17) showed noticeable activity against Fusarium oxysporum (MIC, 16 µg/mL). Overall, this study presents the first evidence that M. incognita can be attracted to or deterred by various compounds in seed exudates through identification of the structures of the compounds in the exudates and analysis of their effects on nematodes. Furthermore, some antifungal compounds were also found. The findings of this work suggest that seed exudates are new source for finding insights into the development of plant protective substances with nematocidal and antifungal effects.

Evaluation of Terpene-Volatile Compounds Repellent to the Coffee Berry Borer, Hypothenemus hampei (Ferrari) (Coleoptera: Curculionidae).

The coffee berry borer (CBB) is one of the main coffee pests in the world including Colombia. This pest is difficult to manage because of its cryptic habits and the continuous availability of coffee fruits. Among the new management strategies being tested is the use of volatile compounds as insect repellents. In this work, the behavioral response of female adult CBBs to terpenes previously identified in the CBB-repellent plant species Lantana camara was evaluated. α-Terpinene, (R)-limonene, farnesene and ß-caryophyllene terpenes were tested via a Y-tube olfactometer in which ripe coffee fruits were accompanied by terpenes at concentrations between 25 and 200 ppm. Only ß-caryophyllene induced a significant and consistent CBB repellent effect at all tested doses. The protective effect of microencapsulated ß-caryophyllene was then determined under laboratory conditions by incorporating the terpene in a colloidosome-gel system at 2.8 × 105 ng/h in the middle of coffee fruits with adult CBBs. The coffee fruits in turn presented a decrease in fruit infestation. Furthermore, the protection of coffee fruits when ß-caryophyllene gels were hung in coffee trees was evaluated in the field; infestations were artificially induced by the use of raisins (CBB-infested old coffee fruits) placed on the ground. Compared with unprotected trees, the trees treated with caryophyllene gels exhibited a 33 to 45% lower degree of infestation. Taken together, the results show that ß-caryophyllene is a promising compound for an integrated pest management (IPM) program in commercial coffee plantations.

Identification and field bioassays of the sex pheromone of Eurytoma maslovskii (Hymenoptera: Eurytomidae).

Long-range sex pheromones are generally considered to be a main cue for mate recognition in the order Hymenoptera. Although considerable attention has been given to the identification of semiochemicals in the superfamily Chalcidoidea, which comprises 19 families, no study has identified active components in a field bioassay. We herein report the sensitive and selective pheromone communication system of the Korean apricot wasp, Eurytoma maslovskii (Eurytomidae), whose larvae feed on Prunus mume seeds. Using gas chromatography coupled with electroantennographic detection (GC-EAD) and mass spectrometry (GC-MS), we detected 2,10-dimethyldodecyl propionate and 2,8-dimethyldecyl propionate in thoracic extracts of female E. maslovskii at a ratio of 8:2 as the active pheromone components. Field experiments showed that the attractive effect of the two compounds is highly enantioselective. Racemic 2,10-dimethyldodecyl propionate and 2,8-dimethyldecyl propionate were not attractive to E. maslovskii males. In bioassays with single enantiomers, the (2 S,10 R)-enantiomer was highly attractive to male wasps, and the (2 S,8 S)-enantiomer was also attractive, although to a lesser degree. No synergistic effect between (2 S,10 R)- and (2 S,8 S)-enantiomers was identified, and the (2 S,10 R)-enantiomer alone caught significantly more males than the natural pheromone extracts. The addition of other enantiomers to the (2 S,10 R)-isomer significantly decreased the attraction of conspecific males. In addition, a very low dose of synthetic pheromone attracted conspecific males, showing that both female signaling and male response traits may have evolved to contribute to species-specific sexual communication in this species.

Adaptive strategy of allohexaploid wheat to long-term salinity stress.

BACKGROUND: Most studies of crop salinity tolerance are conducted under short-term stress condition within one growth stage. Understanding of the mechanisms of crop response to long-term salinity stress (LSS) is valuable for achieving the improvement of crop salinity tolerance. In the current study, we exposed allohexaploid wheat seeds to LSS conditions from germination stage to young seedling stage for 30 days. To elucidate the adaptive strategy of allohexaploid wheat to LSS, we analyzed chloroplast ultrastructure, leaf anatomy, transcriptomic profiling and concentrations of plant hormones and organic compatible solutes, comparing stressed and control plants. RESULTS: Transcriptomic profiling and biochemical analysis showed that energy partitioning between general metabolism maintenance and stress response may be crucial for survival of allohexaploid wheat under LSS. Under LSS, wheat appeared to shift energy from general maintenance to stress response through stimulating the abscisic acid (ABA) pathway and suppressing gibberellin and jasmonic acid pathways in the leaf. We further distinguished the expression status of the A, B, and D homeologs of any gene triad, and also surveyed the effects of LSS on homeolog expression bias for salinity-tolerant triads. We found that LSS had similar effects on expression of the three homeologs for most salinity-tolerant triads. However, in some of these triads, LSS induced different effects on the expression of the three homeologs. CONCLUSIONS: The shift of the energy from general maintenance to stress response may be important for wheat LSS tolerance. LSS influences homeolog expression bias of salinity-tolerant triads.

Hormonal seed-priming improves tomato resistance against broomrape infection.

Although it is well known that parasitic weeds such as Orobanche (broomrape) significantly reduce the yield of economically important crops, their infection-induced oxidative changes need more exploration in their host plants. Moreover, applying an eco-friendly approach to minimize the infection is not yet available. This study was conducted to understand the effect of Orobanche ramosa infection on oxidative and redox status of tomato plants and the impact of hormonal (indole acetic acid (IAA); 0.09 mM and salicylic acid (SA); 1.0 mM) seed-priming upon mitigating the infection threats. Although Orobanche invades tomato roots, its inhibitory effects on shoot biomass were also indicted. Orobanche infection usually induces oxidative damage i.e., high lipid peroxidation, lipoxygenase activity and H2O2 levels, particularly for roots. Interestingly, hormonal seed-priming significantly enhanced tomato shoots and roots growth under both healthy and infected conditions. Also, IAA and SA treatment significantly reduced Orobanche infection-induced oxidative damage. The protective effect of seed-priming was explained by increasing the antioxidant defense markers including the antioxidant metabolites (i.e., total antioxidant capacity, carotenoids, phenolics, flavonoids, ASC, GSH, tocopherols) and enzymes (CAT, POX, GPX, SOD, GR, APX, MDHAR, DHAR), particularly in infected tomato seedlings. Additionally, cluster analysis indicated the differential impact of IAA- and SA-seed-priming, whereas lower oxidative damage and higher antioxidant enzymes' activities in tomato root were particularly reported for IAA treatment. The principal component analysis (PCA) also proclaimed an organ specificity depending on their response to Orobanche infection. Collectively, here and for the first time, we shed the light on the potential of seed-priming with either IAA or SA to mitigate the adverse effect of O. ramosa stress in tomato plants, especially at oxidative stress levels.

Combining Experimental Evolution and Genomics to Understand How Seed Beetles Adapt to a Marginal Host Plant.

Genes that affect adaptive traits have been identified, but our knowledge of the genetic basis of adaptation in a more general sense (across multiple traits) remains limited. We combined population-genomic analyses of evolve-and-resequence experiments, genome-wide association mapping of performance traits, and analyses of gene expression to fill this knowledge gap and shed light on the genomics of adaptation to a marginal host (lentil) by the seed beetle Callosobruchus maculatus. Using population-genomic approaches, we detected modest parallelism in allele frequency change across replicate lines during adaptation to lentil. Mapping populations derived from each lentil-adapted line revealed a polygenic basis for two host-specific performance traits (weight and development time), which had low to modest heritabilities. We found less evidence of parallelism in genotype-phenotype associations across these lines than in allele frequency changes during the experiments. Differential gene expression caused by differences in recent evolutionary history exceeded that caused by immediate rearing host. Together, the three genomic datasets suggest that genes affecting traits other than weight and development time are likely to be the main causes of parallel evolution and that detoxification genes (especially cytochrome P450s and beta-glucosidase) could be especially important for colonization of lentil by C. maculatus.

Differential Metabolic Responses Caused by the Most Important Insect Pest of Coffee Worldwide, the Coffee Berry Borer (Hypothenemus hampei).

The world's coffee supply is threatened by the coffee berry borer, Hypothenemus hampei, the most destructive pest affecting coffee production and quality. This study hypothesized that coffee berry borer infestation induces distinct metabolic responses in the green coffee seeds of Coffea arabica and Coffea canephora (robusta). A targeted metabolomics approach was conducted using liquid chromatography tandem mass spectrometry to quantify intracellular metabolites in infested and uninfested arabica and robusta green seeds. In parallel, the seed biomass content and composition were assessed for the same conditions. Coffee berry borer attack induced increases in the levels of chlorogenic acids in arabica seeds, whereas organic acids and sugar alcohols were more abundant in infested robusta seeds. Most importantly, a set of compounds was identified as biomarkers differentiating the metabolic response of these taxa to the coffee berry borer.

Identification of quantitative trait loci (QTL) controlling resistance to pea weevil (Bruchus pisorum) in a high-density integrated DArTseq SNP-based genetic map of pea.

Pea weevil (Bruchus pisorum) is a damaging insect pest affecting pea (Pisum sativum) production worldwide. No resistant cultivars are available, although some levels of incomplete resistance have been identified in Pisum germplasm. To decipher the genetic control underlying the resistance previously identify in P. sativum ssp. syriacum, a recombinant inbred line (RIL F8:9) population was developed. The RIL was genotyped through Diversity Arrays Technology PL's DArTseq platform and screened under field conditions for weevil seed infestation and larval development along 5 environments. A newly integrated genetic linkage map was generated with a subset of 6,540 markers, assembled into seven linkage groups, equivalent to the number of haploid pea chromosomes. An accumulated distance of 2,503 cM was covered with an average density of 2.61 markers cM-1. The linkage map allowed the identification of three QTLs associated to reduced seed infestation along LGs I, II and IV. In addition, a QTL for reduced larval development was also identified in LGIV. Expression of these QTLs varied with the environment, being particularly interesting QTL BpSI.III that was detected in most of the environments studied. This high-saturated pea genetic map has also allowed the identification of seven potential candidate genes co-located with QTLs for marker-assisted selection, providing an opportunity for breeders to generate effective and sustainable strategies for weevil control.