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1.
Front Immunol ; 13: 793882, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35154111

RESUMEN

In a world with an increasing population at risk of exposure to arthropod-borne flaviviruses, access to timely and accurate diagnostic tests would impact profoundly on the management of cases. Twenty peptides previously identified using a flavivirus proteome-wide microarray were evaluated to determine their discriminatory potential to detect dengue virus (DENV) infection. This included nine peptides recognized by IgM antibodies (PM peptides) and 11 peptides recognized by IgG antibodies (PG peptides). A bead-based multiplex peptide immunoassay (MPIA) using the Luminex technology was set-up to determine Ab binding levels to each of these peptides in a panel of 323 carefully selected human serum samples. Sera are derived from individuals either infected with different viruses, namely, the four DENV serotypes, Zika virus (ZIKV), yellow fever virus (YFV), chikungunya virus (CHIKV), West Nile virus (WNV) and Human immunodeficiency virus (HIV), or receiving vaccination against YFV, tick-borne encephalitis (TBEV), and Japanese encephalitis virus (JEV). Additionally, a set of healthy controls were included. We targeted a minimum specificity of 80% for all the analysis. The PG-9 peptide had the best sensitivity (73%) when testing DENV sera from acute patients (A-DENV; <8 days since symptom onset). With sera from convalescent DENV patients (C-DENV; >10 days since symptom onset) the FPG-1 peptide was the best seromarker with a sensitivity of 86%. When combining all A-DENV and C-DENV samples, peptides PM-22 and FPG-1 had the best-diagnostic performance with a sensitivity of 60 and 61.1%, and areas under the curve (AUC) of 0.7865 and 0.8131, respectively. A Random forest (RF) algorithm was used to select the best combination of peptides to classify DENV infection at a targeted specificity >80%. The best RF model for PM peptides that included A-DENV and C-DENV samples, reached a sensitivity of 72.3%, while for PG peptides, the best RF models for A-DENV only, C-DENV only and A-DENV + C-DENV reached a sensitivity of 88.9%, 89.1%, and 88.3%, respectively. In conclusion, the combination of multiple peptides constitutes a founding set of seromarkers for the discrimination of DENV infected individuals from other flavivirus infections.


Asunto(s)
Biomarcadores , Virus del Dengue/fisiología , Dengue/diagnóstico , Dengue/microbiología , Péptidos , Proteínas Virales , Adolescente , Adulto , Anciano , Anticuerpos Antivirales , Biomarcadores/sangre , Niño , Preescolar , Dengue/sangre , Dengue/epidemiología , Ensayo de Inmunoadsorción Enzimática , Femenino , Humanos , Inmunoglobulina G/sangre , Inmunoglobulina M/sangre , Masculino , Persona de Mediana Edad , Péptidos/sangre , Perú/epidemiología , Pronóstico , Proteoma , Proteómica/métodos , Curva ROC , Juego de Reactivos para Diagnóstico , Reproducibilidad de los Resultados , Proteínas Virales/sangre , Adulto Joven
2.
Biol Open ; 10(9)2021 09 15.
Artículo en Inglés | MEDLINE | ID: mdl-34494647

RESUMEN

Ex vivo, gene therapy is a powerful approach holding great promises for the treatment of both genetic and acquired diseases. Adeno-associated virus (AAV) vectors are a safe and efficient delivery system for modification of mesenchymal stem cells (MSC) that could maximize their therapeutic benefits. Assessment of MSC viability and functional activity after infection with new AAV serotypes is necessary, due to AAV tropism to specific cell types. We infected human and rat adipose-tissue MSC with hybrid AAV-DJ serotype vectors carrying GFP and SCF genes. GFP expression from AAV-DJ was about 1.5-fold superior to that observed with AAV-2 and lasted for at least 21 days as was evaluated by flow cytometry and fluorescence microscopy. AAV-DJ proves to be suitable for the infection of rat and human MSC with a similar efficiency. Infected MSC were still viable but showed a 25-30% growth-rate slowdown. Moreover, we found an increase of SERPINB2 mRNA expression in human MSC while expression of other oxidative stress markers and extracellular matrix proteins was not affected. These results suggest that there is a differential cellular response in MSC infected with AAV viral vectors, which should be taken into account as it can affect the expected outcome for the therapeutic application.


Asunto(s)
Dependovirus/genética , Terapia Genética , Vectores Genéticos/sangre , Células Madre Mesenquimatosas/virología , Proteínas Virales/sangre , Animales , Proteínas Fluorescentes Verdes/metabolismo , Humanos , Ratas , Serogrupo , Factor de Células Madre/metabolismo , Tropismo Viral/genética
3.
Cell Prolif ; 54(9): e13091, 2021 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-34291856

RESUMEN

OBJECTIVES: Recent studies have shown the presence of SARS-CoV-2 in the tissues of clinically recovered patients and persistent immune symptoms in discharged patients for up to several months. Pregnant patients were shown to be a high-risk group for COVID-19. Based on these findings, we assessed SARS-CoV-2 nucleic acid and protein retention in the placentas of pregnant women who had fully recovered from COVID-19 and cytokine fluctuations in maternal and foetal tissues. MATERIALS AND METHODS: Remnant SARS-CoV-2 in the term placenta was detected using nucleic acid amplification and immunohistochemical staining of the SARS-CoV-2 protein. The infiltration of CD14+ macrophages into the placental villi was detected by immunostaining. The cytokines in the placenta, maternal plasma, neonatal umbilical cord, cord blood and amniotic fluid specimens at delivery were profiled using the Luminex assay. RESULTS: Residual SARS-CoV-2 nucleic acid and protein were detected in the term placentas of recovered pregnant women. The infiltration of CD14+ macrophages into the placental villi of the recovered pregnant women was higher than that in the controls. Furthermore, the cytokine levels in the placenta, maternal plasma, neonatal umbilical cord, cord blood and amniotic fluid specimens fluctuated significantly. CONCLUSIONS: Our study showed that SARS-CoV-2 nucleic acid (in one patient) and protein (in five patients) were present in the placentas of clinically recovered pregnant patients for more than 3 months after diagnosis. The immune responses induced by the virus may lead to prolonged and persistent symptoms in the maternal plasma, placenta, umbilical cord, cord blood and amniotic fluid.


Asunto(s)
Citocinas/análisis , Placenta/virología , ARN Viral/aislamiento & purificación , SARS-CoV-2/genética , SARS-CoV-2/inmunología , Proteínas Virales/aislamiento & purificación , Adulto , Líquido Amniótico/química , COVID-19/patología , Femenino , Sangre Fetal/química , Humanos , Recién Nacido , Macrófagos/inmunología , Técnicas de Amplificación de Ácido Nucleico , Placenta/inmunología , Embarazo , ARN Viral/sangre , ARN Viral/genética , SARS-CoV-2/aislamiento & purificación , Proteínas Virales/sangre
4.
PLoS One ; 16(7): e0255096, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34310620

RESUMEN

The COVID-19 pandemic raises the need for diverse diagnostic approaches to rapidly detect different stages of viral infection. The flexible and quantitative nature of single-molecule imaging technology renders it optimal for development of new diagnostic tools. Here we present a proof-of-concept for a single-molecule based, enzyme-free assay for detection of SARS-CoV-2. The unified platform we developed allows direct detection of the viral genetic material from patients' samples, as well as their immune response consisting of IgG and IgM antibodies. Thus, it establishes a platform for diagnostics of COVID-19, which could also be adjusted to diagnose additional pathogens.


Asunto(s)
Prueba de Ácido Nucleico para COVID-19/métodos , Prueba Serológica para COVID-19/métodos , COVID-19/diagnóstico , SARS-CoV-2/inmunología , Imagen Individual de Molécula/métodos , Proteínas Virales/genética , Anticuerpos Antivirales/sangre , Secuencia de Bases , COVID-19/sangre , COVID-19/inmunología , COVID-19/virología , Prueba de Ácido Nucleico para COVID-19/normas , Prueba Serológica para COVID-19/normas , Ensayo de Inmunoadsorción Enzimática , Humanos , Sueros Inmunes/química , Inmunoglobulina G/sangre , Inmunoglobulina M/sangre , Nasofaringe/virología , Poliproteínas/sangre , Poliproteínas/genética , ARN Viral/sangre , ARN Viral/genética , SARS-CoV-2/genética , Sensibilidad y Especificidad , Imagen Individual de Molécula/instrumentación , Proteínas Virales/sangre
5.
Mol Cell Proteomics ; 20: 100052, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33582300

RESUMEN

Distinguishing between Zika and dengue virus infections is critical for accurate treatment, but we still lack detailed understanding of their impact on their host. To identify new protein signatures of the two infections, we used next-generation proteomics to profile 122 serum samples from 62 Zika and dengue patients. We quantified >500 proteins and identified 13 proteins that were significantly differentially expressed (adjusted p-value < 0.05). These proteins typically function in infection and wound healing, with several also linked to pregnancy and brain function. We successfully validated expression differences with Carbonic Anhydrase 2 in both the original and an independent sample set. Three of the differentially expressed proteins, i.e., Fibrinogen Alpha, Platelet Factor 4 Variant 1, and Pro-Platelet Basic Protein, predicted Zika virus infection at a ∼70% true-positive and 6% false-positive rate. Further, we showed that intraindividual temporal changes in protein signatures can disambiguate diagnoses and serve as indicators for past infections. Taken together, we demonstrate that serum proteomics can provide new resources that serve to distinguish between different viral infections.


Asunto(s)
Dengue/sangre , Proteínas Virales/sangre , Infección por el Virus Zika/sangre , Adulto , Dengue/diagnóstico , Virus del Dengue , Femenino , Humanos , Masculino , Persona de Mediana Edad , Valor Predictivo de las Pruebas , Proteómica , Adulto Joven , Virus Zika , Infección por el Virus Zika/diagnóstico
6.
mBio ; 11(5)2020 10 20.
Artículo en Inglés | MEDLINE | ID: mdl-33082264

RESUMEN

An accurate diagnostic test for early severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is the key weapon to control the coronavirus disease 2019 (COVID-19) pandemic. We previously reported that the SARS-CoV-2 genome contains a unique orf8 accessory gene absent from other human-pathogenic coronaviruses. Here, we characterized the SARS-CoV-2 orf8 as a novel immunogenic secreted protein and utilized it for the accurate diagnosis of COVID-19. Extracellular orf8 protein was detected in cell culture supernatant and in sera of COVID-19 patients. In addition, orf8 was found highly immunogenic in COVID-19 patients, who showed early seropositivity for anti-orf8 IgM, IgG, and IgA. We hypothesize that orf8 secretion during SARS-CoV-2 infection facilitates early mounting of B cell response. The serological test detecting anti-orf8 IgG antibody can be used for the early and accurate diagnosis of COVID-19.IMPORTANCE Current commercially available serological tests for COVID-19 patients are detecting antibodies against SARS-CoV-2 nucleoprotein and spike glycoprotein. The antinucleoprotein and antispike antibodies can be accurately detected in patients during the mid or late stage of infection, and therefore, these assays have not been widely used for early diagnosis of COVID-19. In this study, we characterized the secretory property of a SARS-CoV-2 orf8 protein and proposed that orf8 secretion during infection facilitates early mounting of the B cell response. We demonstrated the presence of anti-orf8 antibodies in both symptomatic and asymptomatic patients during the early stage of infection, while the anti-N antibody is not detected. Our serological test detecting anti-orf8 antibodies may facilitate the development of early and accurate diagnosis for COVID-19.


Asunto(s)
Antígenos Virales/inmunología , Betacoronavirus/inmunología , Betacoronavirus/aislamiento & purificación , Infecciones por Coronavirus/diagnóstico , Neumonía Viral/diagnóstico , Proteínas Virales/inmunología , Anticuerpos Antivirales/sangre , Antígenos Virales/sangre , Antígenos Virales/metabolismo , COVID-19 , Línea Celular , Infecciones por Coronavirus/sangre , Diagnóstico Precoz , Ensayo de Inmunoadsorción Enzimática , Humanos , Inmunoglobulina G/sangre , Pandemias , Neumonía Viral/sangre , SARS-CoV-2 , Proteínas Virales/sangre , Proteínas Virales/metabolismo
7.
Nat Commun ; 11(1): 4571, 2020 09 11.
Artículo en Inglés | MEDLINE | ID: mdl-32917871

RESUMEN

Early therapeutic interventions are essential to prevent Alzheimer Disease (AD). The association of several inflammation-related genetic markers with AD and the early activation of pro-inflammatory pathways in AD suggest inflammation as a plausible therapeutic target. Inflammatory Caspase-1 has a significant impact on AD-like pathophysiology and Caspase-1 inhibitor, VX-765, reverses cognitive deficits in AD mouse models. Here, a one-month pre-symptomatic treatment of Swedish/Indiana mutant amyloid precursor protein (APPSw/Ind) J20 and wild-type mice with VX-765 delays both APPSw/Ind- and age-induced episodic and spatial memory deficits. VX-765 delays inflammation without considerably affecting soluble and aggregated amyloid beta peptide (Aß) levels. Episodic memory scores correlate negatively with microglial activation. These results suggest that Caspase-1-mediated inflammation occurs early in the disease and raise hope that VX-765, a previously Food and Drug Administration-approved drug for human CNS clinical trials, may be a useful drug to prevent the onset of cognitive deficits and brain inflammation in AD.


Asunto(s)
Envejecimiento/metabolismo , Enfermedad de Alzheimer/metabolismo , Disfunción Cognitiva/metabolismo , Serpinas/metabolismo , Proteínas Virales/metabolismo , Enfermedad de Alzheimer/tratamiento farmacológico , Péptidos beta-Amiloides/metabolismo , Animales , Conducta Animal , Disfunción Cognitiva/tratamiento farmacológico , Citocinas/metabolismo , Dipéptidos/sangre , Dipéptidos/farmacología , Modelos Animales de Enfermedad , Encefalitis/metabolismo , Encefalitis/patología , Femenino , Humanos , Inflamación/metabolismo , Masculino , Trastornos de la Memoria/metabolismo , Ratones , Ratones Endogámicos C57BL , Ratones Transgénicos , Serpinas/sangre , Serpinas/farmacología , Memoria Espacial/fisiología , Proteínas Virales/sangre , Proteínas Virales/farmacología , para-Aminobenzoatos/sangre , para-Aminobenzoatos/farmacología
8.
mBio ; 11(3)2020 06 16.
Artículo en Inglés | MEDLINE | ID: mdl-32546624

RESUMEN

Outbreaks of filoviruses, such as those caused by the Ebola (EBOV) and Marburg (MARV) virus, are difficult to detect and control. The initial clinical symptoms of these diseases are nonspecific and can mimic other endemic pathogens. This makes confident diagnosis based on clinical symptoms alone impossible. Molecular diagnostics for these diseases that rely on the detection of viral RNA in the blood are only effective after significant disease progression. As an approach to identify these infections earlier in the disease course, we tested the effectiveness of viral RNA detection combined with an assessment of sentinel host mRNAs that are upregulated following filovirus infection. RNAseq analysis of EBOV-infected nonhuman primates identified host RNAs that are upregulated at early stages of infection. NanoString probes that recognized these host-response RNAs were combined with probes that recognized viral RNA and were used to classify viral infection both prior to viremia and postviremia. This approach was highly successful at identifying samples from nonhuman primate subjects and correctly distinguished the causative agent in a previremic stage in 10 EBOV and 5 MARV samples. This work suggests that unified host response/viral fingerprint assays can enable diagnosis of disease earlier than testing for viral nucleic acid alone, which could decrease transmission events and increase therapeutic effectiveness.IMPORTANCE Current molecular tests that identify infection with high-consequence viruses such as Ebola virus and Marburg virus are based on the detection of virus material in the blood. These viruses do not undergo significant early replication in the blood and, instead, replicate in organs such as the liver and spleen. Thus, virus begins to accumulate in the blood only after significant replication has already occurred in those organs, making viremia an indicator of infection only after initial stages have become established. Here, we show that a multianalyte assay can correctly identify the infectious agent in nonhuman primates (NHPs) prior to viremia through tracking host infection response transcripts. This illustrates that a single-tube, sample-to-answer format assay could be used to advance the time at which the type of infection can be determined and thereby improve outcomes.


Asunto(s)
Genoma Viral , Fiebre Hemorrágica Ebola/diagnóstico , Interacciones Huésped-Patógeno/genética , Enfermedad del Virus de Marburg/diagnóstico , ARN Viral/aislamiento & purificación , Transcriptoma , Animales , Ebolavirus/genética , Fiebre Hemorrágica Ebola/virología , Humanos , Macaca , Enfermedad del Virus de Marburg/virología , Marburgvirus/genética , Análisis por Micromatrices , Proteínas Virales/sangre , Proteínas Virales/genética , Viremia
9.
Int J Lab Hematol ; 42 Suppl 1: 11-18, 2020 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-32311826

RESUMEN

The ongoing COVID-19 pandemic originated in Wuhan, Hubei Province, China, in December 2019. The etiologic agent is a novel coronavirus of presumed zoonotic origin with structural similarity to the viruses responsible for severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS). Like SARS and MERS, COVID-19 infection manifests most frequently with lower respiratory symptoms. A minority of patients progress to acute respiratory distress syndrome/ diffuse alveolar damage. In addition to its central role in the diagnosis of COVID-19 infection, the clinical laboratory provides critical information to clinicians regarding prognosis, disease course, and response to therapy. The purpose of this review is to (a) provide background context about the origins and course of the pandemic, (b) discuss the laboratory's role in the diagnosis of COVID-19 infection, (c) summarize the current state of biomarker analysis in COVID-19 infection, with an emphasis on markers derived from the hematology laboratory, (d) comment on the impact of COVID-19 on hematology laboratory safety, and (e) describe the impact the pandemic has had on organized national and international educational activities worldwide.


Asunto(s)
Betacoronavirus/aislamiento & purificación , Servicios de Laboratorio Clínico/organización & administración , Infecciones por Coronavirus/epidemiología , Linfopenia/epidemiología , Pandemias , Neumonía Viral/epidemiología , Trombocitopenia/epidemiología , Anticuerpos Antivirales/sangre , Betacoronavirus/patogenicidad , Biomarcadores/sangre , Proteína C-Reactiva/metabolismo , COVID-19 , Prueba de COVID-19 , China/epidemiología , Técnicas de Laboratorio Clínico/métodos , Control de Enfermedades Transmisibles , Infecciones por Coronavirus/diagnóstico , Infecciones por Coronavirus/fisiopatología , Infecciones por Coronavirus/transmisión , Hematología/métodos , Humanos , Incidencia , Italia/epidemiología , Laboratorios/organización & administración , Linfopenia/diagnóstico , Linfopenia/fisiopatología , Equipo de Protección Personal/provisión & distribución , Neumonía Viral/diagnóstico , Neumonía Viral/fisiopatología , Neumonía Viral/transmisión , Polipéptido alfa Relacionado con Calcitonina/sangre , SARS-CoV-2 , Trombocitopenia/diagnóstico , Trombocitopenia/fisiopatología , Estados Unidos/epidemiología , Proteínas Virales/sangre
10.
Appl Biochem Biotechnol ; 191(4): 1384-1394, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32100233

RESUMEN

In this study, molecular imprinted polymer (MIP)-based impedimetric sensor has been developed to detect dengue infection at an early stage. Screen-printed carbon electrode (SPCE) was modified with electrospun nanofibers of polysulfone (PS) and then, coated with dopamine while using NS1 (non-structural protein 1-a specific and sensitive biomarker for dengue virus infection) as template during polymerization. The self-polymerization of dopamine at room temperature helps to retain exact structure of template (NS1) which results in generating geometrically fit imprinted sites for specific detection of target analyte. The electrochemical properties of MIP-modified SPCEs were studied by cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS) at every step of modification. Under optimal conditions, impedimetric measurements showed linear response in the range from 1 to 200 ng/mL. The developed sensor can selectively detect NS1 concentrations as low as 0.3 ng/mL. Moreover, impedimetric sensor system was also employed for NS1 determination in real human serum samples and satisfying recoveries varying from 95 to 97.14% were obtained with standard deviations of less than 5%.


Asunto(s)
Dengue/diagnóstico , Espectroscopía Dieléctrica/métodos , Técnicas Electroquímicas/métodos , Electrodos , Polímeros Impresos Molecularmente , Técnicas Biosensibles/métodos , Virus del Dengue , Humanos , Límite de Detección , Polimerizacion , Reproducibilidad de los Resultados , Proteínas Virales/sangre
11.
IET Nanobiotechnol ; 14(1): 98-104, 2020 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-31935685

RESUMEN

A highly sensitive, non-invasive, and rapid HBV (Hepatitis B virus) screening method combining membrane protein purification with silver nanoparticle-based surface-enhanced Raman scattering (SERS) spectroscopy was developed in this study. Reproducible serum protein SERS spectra were obtained from cellulose acetate membrane-purified human serum from 94 HBV patients and 89 normal groups. Tentative assignments of serum protein SERS spectra showed that the HBV patients primarily led to specific biomedical changes of serum protein. Principal components analysis and linear discriminate analysis were introduced to analyse the obtained spectra, with the diagnostic sensitivity of 92.6% and specificity of 77.5% were achieved for differentiating HBV patients from normal groups.


Asunto(s)
Celulosa/análogos & derivados , Hepatitis B/sangre , Hepatitis B/diagnóstico , Espectrometría Raman/métodos , Biomarcadores/sangre , Proteínas Sanguíneas/análisis , Celulosa/química , Virus de la Hepatitis B , Humanos , Nanopartículas del Metal/química , Análisis de Componente Principal , Plata/química , Proteínas Virales/sangre
12.
J Neuroimmunol ; 339: 577116, 2020 02 15.
Artículo en Inglés | MEDLINE | ID: mdl-31805475

RESUMEN

A strong north-to-south gradient is observed in the distribution of multiple sclerosis (MS), hinting toward an environmental etiology. Vitamin D has been associated with a decreased incidence of MS and may explain, in part, the lower prevalence in tropical climates. However, the existence of MS epidemics implies the possibility of an infectious etiology. Epstein-Barr virus (EBV) infection precedes MS presentation in nearly all affected individuals. While the individual contribution of EBV, vitamin D deficiency, and specific risk genes to MS etiology is possible, their potential interaction is of great interest and may have a synergistic effect on the development of MS.


Asunto(s)
Infecciones por Virus de Epstein-Barr/sangre , Antígenos Nucleares del Virus de Epstein-Barr/sangre , Esclerosis Múltiple/sangre , Proteínas Virales/sangre , Deficiencia de Vitamina D/sangre , Infecciones por Virus de Epstein-Barr/diagnóstico , Infecciones por Virus de Epstein-Barr/epidemiología , Humanos , Esclerosis Múltiple/diagnóstico , Esclerosis Múltiple/epidemiología , Vitamina D/sangre , Deficiencia de Vitamina D/diagnóstico , Deficiencia de Vitamina D/epidemiología
13.
Cancer Epidemiol Biomarkers Prev ; 29(1): 57-62, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31619404

RESUMEN

BACKGROUND: The discovery of Epstein-Barr virus (EBV) in Burkitt lymphoma tumors represented the first link between a virus and cancer in humans, but the underlying role of this virus in endemic Burkitt lymphoma remains unclear. Nearly all children in Burkitt lymphoma-endemic areas are seropositive for EBV, but only a small percentage develop disease. Variation in EBV-directed immunity could be an explanatory cofactor. METHODS: We examined serum from 150 Burkitt lymphoma cases and 150 controls using a protein microarray that measured IgG and IgA antibodies against 202 sequences across the entire EBV proteome. Variation in the EBV-directed antibody repertoire between Burkitt lymphoma cases and controls was assessed using unpaired t tests. ORs quantifying the association between anti-EBV IgG response tertiles and Burkitt lymphoma status were adjusted for age, sex, and study year. RESULTS: Thirty-three anti-EBV IgG responses were elevated in Burkitt lymphoma cases compared with controls (P ≤ 0.0003). Burkitt lymphoma-associated IgG elevations were strongest for EBV proteins involved in viral replication and antiapoptotic signaling. Specifically, we observed ORs ≥4 for BMRF1 (early antigen), BBLF1 (tegument protein), BHRF1 (Bcl-2 homolog), BZLF1 (Zebra), BILF2 (glycoprotein), BLRF2 [viral capsid antigen (VCA)p23], BDLF4, and BFRF3 (VCAp18). Adjustment for malaria exposure and inheritance of the sickle cell variant did not alter associations. CONCLUSIONS: Our data suggest that the anti-EBV serologic profile in patients with Burkitt lymphoma is altered, with strong elevations in 33 of the measured anti-EBV IgG antibodies relative to disease-free children. IMPACT: The Burkitt lymphoma-specific signature included EBV-based markers relevant for viral replication and antiapoptotic activity, providing clues for future Burkitt lymphoma pathogenesis research.


Asunto(s)
Anticuerpos Antivirales/sangre , Linfoma de Burkitt/epidemiología , Enfermedades Endémicas , Infecciones por Virus de Epstein-Barr/epidemiología , Herpesvirus Humano 4/aislamiento & purificación , Adolescente , Anticuerpos Antivirales/inmunología , Antígenos Virales/sangre , Antígenos Virales/inmunología , Apoptosis/inmunología , Linfoma de Burkitt/sangre , Linfoma de Burkitt/virología , Estudios de Casos y Controles , Niño , Preescolar , Infecciones por Virus de Epstein-Barr/sangre , Infecciones por Virus de Epstein-Barr/virología , Femenino , Ghana/epidemiología , Herpesvirus Humano 4/inmunología , Humanos , Lactante , Recién Nacido , Masculino , Estudios Seroepidemiológicos , Proteínas Virales/sangre , Proteínas Virales/inmunología , Replicación Viral/inmunología
14.
J Infect Dis ; 221(5): 715-720, 2020 02 18.
Artículo en Inglés | MEDLINE | ID: mdl-31593588

RESUMEN

BACKGROUND: Infection with multiple cytomegalovirus (CMV) strains (mixed infection) was reported in a variety of hosts. As the virus genetic diversity in primary CMV infection and the changes over time remain incompletely defined, we examined CMV diversity and changes in diversity over time in healthy adolescent females who participated in a phase 2 CMV gB/MF59 vaccine trial. METHODS: CMV genetic diversity was determined by genotyping of 5 genes-gB (UL55), gH (UL75), gN (UL73), US28, and UL144-in urine, saliva, and plasma samples from 15 study subjects. RESULTS: At the time of primary infection, 5 of 12 (42%) urine samples had multiple virus strains, and 50% of vaccine recipients were infected with gB1 genotype (vaccine strain). Mixed infection was documented in all 15 subjects within 3 months after primary infection, and the majority had different CMV genotypes in different compartments. Changes in genotypes over time were observed in all subjects. CONCLUSIONS: Infection with multiple CMV genotypes was common during primary infection and further diversification occurred over time. Infection with gB1 genotype in vaccine recipients suggests a lack of strain-specific protection from the vaccine. As only 5 polymorphic genes were assessed, this study likely underestimated the true genetic diversity in primary CMV infection.


Asunto(s)
Infecciones por Citomegalovirus/prevención & control , Vacunas contra Citomegalovirus/uso terapéutico , Citomegalovirus/genética , Polimorfismo Genético , Vacunación , Adolescente , Coinfección/diagnóstico , Coinfección/virología , Infecciones por Citomegalovirus/diagnóstico , Infecciones por Citomegalovirus/virología , Método Doble Ciego , Femenino , Genotipo , Humanos , Glicoproteínas de Membrana/sangre , Glicoproteínas de Membrana/genética , Glicoproteínas de Membrana/orina , Reacción en Cadena en Tiempo Real de la Polimerasa , Receptores de Quimiocina/sangre , Receptores de Quimiocina/genética , Saliva/virología , Proteínas del Envoltorio Viral/sangre , Proteínas del Envoltorio Viral/genética , Proteínas del Envoltorio Viral/orina , Carga Viral , Proteínas Virales/sangre , Proteínas Virales/genética , Proteínas Virales/orina
15.
Anal Chem ; 91(17): 11030-11037, 2019 09 03.
Artículo en Inglés | MEDLINE | ID: mdl-31365232

RESUMEN

Macacine herpesvirus or B Virus (BV) is a zoonotic agent that leads to high mortality rates in humans if transmitted and untreated. Here, BV is used as a test case to establish a two-step procedure for developing high throughput serological assays based on synthetic peptides. In step 1, peptide microarray analysis of 42 monkey sera (30 of them tested BV positive by ELISA) revealed 1148 responses against 369 different peptides. The latter could be grouped into 142 different antibody target regions (ATRs) in six different glycoproteins (gB, gC, gD, gG, gH, and gL) of BV. The high number of newly detected ATRs was made possible inter alia by a new preanalytical protocol that reduced unspecific binding of serum components to the cellulose-based matrix of the microarray. In step 2, soluble peptides corresponding to eight ATRs of particularly high antigenicity were synthesized and coupled to fluorescently labeled beads, which were subsequently employed in immunochemical bead flow assays. Their outcome mirrored the ELISA results used as reference. Hence, convenient, fast, and economical screening of arbitrarily large macaque colonies for BV infection is now possible. The study demonstrates that a technology platform switch from two-dimensional high-resolution peptide arrays used for epitope discovery to a readily available bead array platform for serology applications is feasible.


Asunto(s)
Anticuerpos Antivirales/sangre , Epítopos/sangre , Infecciones por Herpesviridae/veterinaria , Herpesvirus Cercopitecino 1/inmunología , Enfermedades de los Primates/diagnóstico , Proteínas Virales/sangre , Animales , Sitios de Unión , Epítopos/química , Infecciones por Herpesviridae/diagnóstico , Infecciones por Herpesviridae/inmunología , Infecciones por Herpesviridae/virología , Herpesvirus Cercopitecino 1/genética , Humanos , Sueros Inmunes/química , Inmunoconjugados/química , Macaca mulatta/inmunología , Macaca mulatta/virología , Modelos Moleculares , Enfermedades de los Primates/inmunología , Enfermedades de los Primates/virología , Análisis por Matrices de Proteínas/instrumentación , Análisis por Matrices de Proteínas/métodos , Unión Proteica , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Dominios y Motivos de Interacción de Proteínas , Proteínas Virales/química
16.
J Infect ; 78(3): 232-240, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30659856

RESUMEN

OBJECTIVES: Hepatitis E virus genotype 3 (HEV3) is responsible for acute and chronic liver disease in solid organ transplant (SOT) recipients. HEV was recently found in the urine of some acutely and chronically genotype 4-infected patients. METHODS: We examined the urinary excretion of HEV3 by 24 consecutive SOT recipients at the acute phase of HEV hepatitis and characterized the excreted virus. RESULTS: Urinary HEV RNA was detected in 12 (50%) of the 24 transplanted patients diagnosed with HEV hepatitis. Urinary HEV antigen (Ag) was detected in all but one of the patients (96%). The density of RNA-containing HEV particles in urine was low (1.11-1.12 g/cm3), corresponding to lipid-associated virions. The urinary HEV RNA/Ag detected was not associated with impaired kidney function or de novo proteinuria. Finally, there was more HEV Ag in the serum at the acute phase of HEV infection in SOT recipients whose infection became chronic. CONCLUSIONS: HEV3 excreted via the urine of SOT recipients at the acute phase of HEV hepatitis has a lipid envelope. Renal function was not impaired. While urinary HEV Ag was a sensitive indicator of HEV infection, only acute phase serum HEV Ag indicated the development of a chronic infection.


Asunto(s)
Hepatitis E/diagnóstico , Huésped Inmunocomprometido , Proteínas Virales/sangre , Proteínas Virales/orina , Enfermedad Aguda , Adulto , Antígenos Virales/sangre , Antígenos Virales/orina , Femenino , Genotipo , Hepatitis E/sangre , Hepatitis E/orina , Virus de la Hepatitis E/genética , Virus de la Hepatitis E/aislamiento & purificación , Humanos , Masculino , Persona de Mediana Edad , ARN Viral/genética , ARN Viral/orina , Receptores de Trasplantes
17.
Viruses ; 11(1)2019 01 15.
Artículo en Inglés | MEDLINE | ID: mdl-30650547

RESUMEN

Hepatitis E virus (HEV) is a common cause of acute hepatitis worldwide. Current methods for evaluating the neutralizing activity of HEV-specific antibodies include immunofluorescence focus assays (IFAs) and real-time PCR, which are insensitive and operationally complicated. Here, we developed a high-throughput neutralization assay by measuring secreted pORF2 levels using an HEV antigen enzyme-linked immunosorbent assay (ELISA) kit based on the highly replicating HEV genotype (gt) 3 strain Kernow. We evaluated the neutralizing activity of HEV-specific antibodies and the sera of vaccinated individuals (n = 15) by traditional IFA and the novel assay simultaneously. A linear regression analysis shows that there is a high degree of correlation between the two assays. Furthermore, the anti-HEV IgG levels exhibited moderate correlation with the neutralizing titers of the sera of vaccinated individuals, indicating that immunization with gt 1 can protect against gt 3 Kernow infection. We then determined specificity of the novel assay and the potential threshold of neutralizing capacity using anti-HEV IgG positive sera (n = 27) and anti-HEV IgG negative sera (n = 23). The neutralizing capacity of anti-HEV IgG positive sera was significantly stronger than that of anti-HEV IgG negative. In addition, ROC curve analysis shows that the potential threshold of neutralizing capacity of sera was 8.07, and the sensitivity and specificity of the novel assay was 88.6% and 100%, respectively. Our results suggest that the neutralization assay using the antigen ELISA kit could be a useful tool for HEV clinical research.


Asunto(s)
Anticuerpos Antihepatitis/sangre , Virus de la Hepatitis E , Ensayos Analíticos de Alto Rendimiento/métodos , Inmunoglobulina G/sangre , Pruebas de Neutralización/métodos , Proteínas Virales/sangre , Ensayo de Inmunoadsorción Enzimática , Femenino , Técnica del Anticuerpo Fluorescente , Células Hep G2 , Hepatitis E/diagnóstico , Hepatitis E/inmunología , Humanos , Inmunoglobulina M/sangre , Masculino , Persona de Mediana Edad , Sensibilidad y Especificidad , Vacunación
18.
Biomedica ; 38(0): 37-50, 2018 08 01.
Artículo en Inglés | MEDLINE | ID: mdl-30184362

RESUMEN

Introduction: Despite the availability of an effective vaccine and treatment to reduce the viral load and progressive hepatocellular injury, approximately 240 million people worldwide are chronically infected with the hepatitis B virus (HBV). In Colombia, the circulation of different viral genotypes has been confirmed. Mutations in the genome have been associated to antiviral therapy resistance, viral escape to neutralizing antibodies, occult infection and progression to hepatocellular carcinoma. Objective: To identify the genotypes and the presence of mutations in the coding region of the surface (S) antigen and the reverse transcriptase (RT) domain of the polymerase of HBV obtained from serum samples for hepatitis B diagnosis received by the Instituto Nacional de Salud during the period 2002-2014. Materials and methods: A total of 495 serum samples with previous HBsAg reactive result were used for molecular detection. A fragment of 1,591 nucleotides was sequenced, and the corresponding phylogenetic analysis was performed. Results: We detected the viral genome of HBV in 66 samples and 28 were successfully sequenced. The phylogenetic analysis allowed the identification of subgenotypes F3 and A2. The L180M and M204V resistance mutations were simultaneously identified in one sample, while the I169L resistance mutation was identified in another one. A single escape mutation, P120Q, was identified in one more. Two samples showed a deletion of 105 nucleotides in the preS1-preS2 region. Conclusions: The circulation of genotypes/subgenotypes F3 and A2 of HBV in Colombia was corroborated, as well as the presence of some resistance and escape mutations. The present study constitutes a contribution to the molecular epidemiology of HBV in Colombia.


Asunto(s)
Genes Virales , Antígenos de Superficie de la Hepatitis B/genética , Virus de la Hepatitis B/genética , ADN Polimerasa Dirigida por ARN/genética , Proteínas Virales/genética , Secuencia de Bases , ADN Viral/sangre , ADN Viral/genética , Farmacorresistencia Viral/genética , Variación Genética/genética , Genotipo , Antígenos de Superficie de la Hepatitis B/sangre , Virus de la Hepatitis B/enzimología , Humanos , Mutación Missense , Filogenia , Mutación Puntual , Dominios Proteicos , ADN Polimerasa Dirigida por ARN/sangre , Estudios Retrospectivos , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología de Secuencia de Ácido Nucleico , Proteínas Virales/sangre
19.
Mol Cell Proteomics ; 17(2): 349-356, 2018 02.
Artículo en Inglés | MEDLINE | ID: mdl-29141913

RESUMEN

Zika virus (ZIKV) and dengue virus (DENV) are closely related flaviviruses that cause widespread, acute febrile illnesses, notably microcephaly for fetuses of infected pregnant women. Detecting the viral cause of these illnesses is paramount to determine risks to patients, counsel pregnant women, and help fight outbreaks. A combined diagnostic algorithm for ZIKV and DENV requires Reverse transcription polymerase chain reaction (RT-PCR) and IgM antibody detection. RT-PCR differentiates between DENV and ZIKV infections during the acute phases of infection, but differentiation based on IgM antibodies is currently nearly impossible in endemic areas. We have developed a ZIKV/DENV protein array and tested it with serum samples collected from ZIKV- and DENV-infected patients and healthy subjects in Puerto Rico. Our analyses reveal a biomarker panel that are capable of discriminating ZIKV and DENV infections with high accuracy, including Capsid protein from African ZIKV strain MR766, and other 5 pair of proteins (NS1, NS2A, NS3, NS4B and NS5) from ZIKV and DENV respectively. Both sensitivity and specificity of the test for ZIKV from DENV are around 90%. We propose that the ZIKV/DENV protein array will be used in future studies to discriminate patients infected with ZIKV from DENV.


Asunto(s)
Dengue/diagnóstico , Proteínas Virales/sangre , Infección por el Virus Zika/diagnóstico , Biomarcadores/sangre , ADN Complementario/genética , ADN Viral/sangre , Dengue/sangre , Virus del Dengue/genética , Humanos , Inmunoglobulina M/sangre , Análisis por Matrices de Proteínas , Virus Zika/genética , Infección por el Virus Zika/sangre
20.
Vaccine ; 35(43): 5883-5889, 2017 10 13.
Artículo en Inglés | MEDLINE | ID: mdl-28919226

RESUMEN

BACKGROUND: Worldwide about 1.5 million clinical cases of hepatitis A virus (HAV) infections occur every year and increasingly countries are introducing HAV vaccination into the childhood immunization schedule with a single dose instead of the originally licenced two dose regimen. Diagnosis of acute HAV infection is determined serologically by anti-HAV-IgM detection using ELISA. Additionally anti-HAV-IgG can become positive during the early phase of symptoms, but remains detectable after infection and also after vaccination against HAV. Currently no serological marker allows the differentiation of HAV vaccinated individuals and those with a past infection with HAV. Such differentiation would greatly improve evaluation of vaccination campaigns and risk assessment of HAV outbreaks. Here we tested the HAV non-structural protein 2A, important for the capsid assembly, as a biomarker for the differentiation of the immune status in previously infected and vaccinated individuals. METHODS: HAV antigens were recombinantly expressed as glutathione-S-transferase (GST) fusion proteins. Using glutathione tagged, magnetic fluorescent beads (Luminex®), the proteins were affinity purified and used in a multiplex serological assay. The multiplex HAV assay was validated using 381 reference sera in which the immune status HAV negative, vaccinated or infected was established using the Abbott ARCHITECT® HAVAb-IgM or IgG, the commercial HAV ELISA from Abnova and documentation in vaccination cards. RESULTS: HAV multiplex serology showed a sensitivity of 99% and specificity of 95% to detect anti-HAV IgG/IgM positive individuals. HAV biomarker 2A allowed the differentiation between previously infected and vaccinated individuals. HAV vaccinated individuals and previously infected individuals could be identified with 92% accuracy. CONCLUSION: HAV biomarker 2A can be used to differentiate between previously HAV-vaccinated and naturally infected individuals. Within a multiplex serological approach this assay can provide valuable novel information in the context of outbreak investigations, longitudinal population based studies and evaluations of immunization campaigns.


Asunto(s)
Biomarcadores/sangre , Cisteína Endopeptidasas/sangre , Virus de la Hepatitis A/inmunología , Hepatitis A/sangre , Hepatitis A/diagnóstico , Proteínas Virales/sangre , Adolescente , Adulto , Proteínas de la Cápside/sangre , Proteínas de la Cápside/inmunología , Niño , Preescolar , Cisteína Endopeptidasas/inmunología , Hepatitis A/inmunología , Hepatitis A/virología , Anticuerpos de Hepatitis A/sangre , Anticuerpos de Hepatitis A/inmunología , Humanos , Inmunoglobulina G/sangre , Inmunoglobulina G/inmunología , Inmunoglobulina M/sangre , Inmunoglobulina M/inmunología , Lactante , Recién Nacido , Vacunación/métodos , Proteínas Virales/inmunología
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