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1.
J Chem Phys ; 157(4): 044306, 2022 Jul 28.
Article in English | MEDLINE | ID: mdl-35922349

ABSTRACT

Using a magnetic bottle multi-electron time-of-flight spectrometer in combination with synchrotron radiation, double-core-hole pre-edge and continuum states involving the K-shell of the carbon atoms in n-butane (n-C4H10) have been identified, where the ejected core electron(s) and the emitted Auger electrons from the decay of such states have been detected in coincidence. An assignment of the main observed spectral features is based on the results of multi-configurational self-consistent field (MCSCF) calculations for the excitation energies and static exchange (STEX) calculations for energies and intensities. MCSCF results have been analyzed in terms of static and dynamic electron relaxation as well as electron correlation contributions to double-core-hole state ionization potentials. The analysis of applicability of the STEX method, which implements the one-particle picture toward the complete basis set limit, is motivated by the fact that it scales well toward large species. We find that combining the MCSCF and STEX techniques is a viable approach to analyze double-core-hole spectra.

2.
J Phys Condens Matter ; 34(36)2022 Jul 12.
Article in English | MEDLINE | ID: mdl-35767974

ABSTRACT

In this paper we put forward some historical notes on the development of computational chemistry toward applications of x-ray spectroscopies. We highlight some of the important contributions by Enrico Clementi as method and program developer and as a supporter of this branch of computational research. We bring up a modern example based on the very recent experimental development of x-ray absorption of cationic molecules. As we show this spectroscopy poses new challenges for electronic structure theory and the electron correlation problem.

3.
Phys Rev Lett ; 124(20): 203001, 2020 May 22.
Article in English | MEDLINE | ID: mdl-32501042

ABSTRACT

The x-ray absorption spectrum of N_{2}^{+} in the K-edge region has been measured by irradiation of ions stored in a cryogenic radio frequency ion trap with synchrotron radiation. We interpret the experimental results with the help of restricted active space multiconfiguration theory. Spectroscopic constants of the 1σ_{u}^{-1} ^{2}Σ_{u}^{+} state, and the two 1σ_{u}^{-1}3σ_{g}^{-1}1π_{g} ^{2}Π_{u} states are determined from the measurements. The charge of the ground state together with spin coupling involving several open shells give rise to double excitations and configuration mixing, and a complete breakdown of the orbital picture for higher lying core-excited states.

4.
J Phys Chem A ; 117(31): 6798-802, 2013 Aug 08.
Article in English | MEDLINE | ID: mdl-23859627

ABSTRACT

Motivated by recent opportunitites to study hollow molecules with multiple core holes offered by X-ray free electron lasers, we revisit the core-hole localization and symmetry breaking problem, now studying ionization of more than one core electron. It is shown, using a N2 molecule with one, two, three, and four core holes, for example, that in a multiconfigurational determination of the core ionization potentials employing a molecular point group with broken inversion symmetry, one particular configuration is sufficient to account for the symmetry breaking relaxation energy in an independent particle approximation in the case of one or three holes, whereas the choice of point group symmetry is unessential for two and four holes. The relaxation energy follows a quadratic dependence on the number of holes in both representations.


Subject(s)
Electrons , Ions , Nitrogen/chemistry , Thermodynamics
5.
J Chem Phys ; 136(15): 154308, 2012 Apr 21.
Article in English | MEDLINE | ID: mdl-22519327

ABSTRACT

The resonant Auger electron spectra obtained after photoexcitation below the C and N 1s ionization thresholds in the pyrimidine molecule have been measured at several photon energies. The results show the relevance of the localization of the inner hole and of the matching between the symmetries of the intermediate and final states in the decay spectra via participator transitions. The comparison with the Auger electron spectra suggests some assignment for the two-hole-one-particle states reached via spectator transitions. The analysis of the participator decay is supported by state-of-the art density functional theory calculations.


Subject(s)
Carbon/chemistry , Nitrogen/chemistry , Pyrimidines/chemistry , Spectrum Analysis/methods , Quantum Theory
6.
J Chem Phys ; 133(9): 094305, 2010 Sep 07.
Article in English | MEDLINE | ID: mdl-20831316

ABSTRACT

Double photoionization spectra of the CS(2) molecule have been recorded using the TOF-PEPECO technique in combination with synchrotron radiation at the photon energies hν=220, 230, 240, 243, and 362.7 eV. The spectra were recorded in the S 2p and C 1s inner-shell ionization regions and reflect dicationic states formed out of one inner-shell vacancy and one vacancy in the valence region. MCSCF calculations were performed to model the energies of the dicationic states. The spectra associated with a S 2p vacancy are well structured and have been interpreted in some detail by comparison to conventional S 2p and valence photoelectron spectra. The lowest inner-shell-valence dicationic state is observed at the vertical double ionization energy 188.45 eV and is associated with a (2p(3/2))(-1)(2π(g))(-1) double vacancy. The spectrum connected to the C 1s vacancy shows a distinct line at 310.8 eV, accompanied by additional broad features at higher double ionization energies. This line is associated with a (C 1s)(-1)(2π(g))(-1) double vacancy.


Subject(s)
Carbon Disulfide/chemistry , Ions/chemistry , Photons , Spectrum Analysis
7.
J Chem Phys ; 133(3): 034302, 2010 Jul 21.
Article in English | MEDLINE | ID: mdl-20649325

ABSTRACT

The inner shell excitation of pyrimidine and some halogenated pyrimidines near the C and N K-edges has been investigated experimentally by near edge x-ray absorption fine structure spectroscopy and theoretically by density functional theory calculations. The selected targets, 5-Br-pyrimidine, 2-Br-pyrimidine, 2-Cl-pyrimidine, and 5-Br-2-Cl-pyrimidine, allow the effects of the functionalization of the pyrimidine ring to be studied either as a function of different halogen atoms bound to the same molecular site or as a function of the same halogen atom bound to different molecular sites. The results show that the individual characteristics of the different spectra of the substituted pyrimidines can be rationalized in terms of variations in electronic and geometrical structures of the molecule depending on the localization and the electronegativity of the substituent.


Subject(s)
Halogenation , Pyrimidines/chemistry , Quantum Theory , X-Ray Absorption Spectroscopy , Vibration
8.
Langmuir ; 24(7): 3205-14, 2008 Apr 01.
Article in English | MEDLINE | ID: mdl-18275228

ABSTRACT

The adsorption on the TiO(2) surface of two dipeptides AE (L-alanine-L-glutamic acid) and AK (L-alanine-L-lysine), that are "building blocks" of the more complex oligopeptide EAK16, has been investigated both theoretically and experimentally. Classical molecular dynamics simulations have been used to study the adsorption of H-Ala-Glu-NH(2) and H-Ala-Lys-NH(2) dipeptides onto a rutile TiO(2) (110) surface in water solution. Several peptide conformers have been considered simultaneously upon the surface. The most probable contact points between the molecules and the surface have been identified. Carbonyl oxygens as well as nitrogen atoms are possible Ti coordination points. Local effects are responsible for adsorption and desorption events. Self-interaction effects can induce molecular reorientations giving less strongly adsorbed species. The chemical structure and composition of thin films of the two dipeptides AE and AK on TiO(2) were investigated by XPS (X-ray photoelectron spectroscopy) measurements at both O and N K-edges. Theoretical ab initio calculations (DeltaSCF) were also performed to simulate the spectra, allowing for a direct comparison between experiment and theory.


Subject(s)
Dipeptides/chemistry , Titanium/chemistry , Adsorption , Molecular Conformation , Oligopeptides/chemistry , Solutions , Surface Properties , Water
9.
J Chem Phys ; 128(4): 044302, 2008 Jan 28.
Article in English | MEDLINE | ID: mdl-18247944

ABSTRACT

An accurate experimental and theoretical study of the lowest core excitation of CH(3) and CD(3) methyl radicals is presented. The complex vibrational structure of the lowest band of the x-ray absorption spectrum (XAS) is due to the large variation of the molecular geometry, which is planar in the ground state and pyramidal in the core-excited state. The XAS spectra of the two radicals were recorded at high resolution and assigned by theoretical simulations of the spectra, taking into account the coupling of symmetrical stretching and symmetrical bending (umbrellalike) deformations of the radicals. An excellent agreement between experimental and theoretical spectral profiles allowed us to accurately characterize the vibrational structure of the electronic transition. The similarities, as well as the differences, of the peculiar vibrational progression observed for the two radicals are explained by the strong anharmonicity along the umbrella coordinate and by the isotopic variation, leading to a different probing of the double-well potential energy surface of the core excited state during the nuclear motion.


Subject(s)
Deuterium/chemistry , Hydrogen/chemistry , Methane/analogs & derivatives , Models, Theoretical , Algorithms , Electron Transport , Methane/chemistry , Photons , Spectrum Analysis , Thermodynamics
10.
J Chem Phys ; 128(6): 064304, 2008 Feb 14.
Article in English | MEDLINE | ID: mdl-18282035

ABSTRACT

We report on an experimental and theoretical investigation of x-ray absorption and resonant Auger electron spectra of gas phase O(2) recorded in the vicinity of the O 1s-->sigma(*) excitation region. Our investigation shows that core excitation takes place in a region with multiple crossings of potential energy curves of the excited states. We find a complete breakdown of the diabatic picture for this part of the x-ray absorption spectrum, which allows us to assign an hitherto unexplained fine structure in this spectral region. The experimental Auger data reveal an extended vibrational progression, for the outermost singly ionized X (2)Pi(g) final state, which exhibits strong changes in spectral shape within a short range of photon energy detuning (0 eV>Omega>-0.7 eV). To explain the experimental resonant Auger electron spectra, we use a mixed adiabatic/diabatic picture selecting crossing points according to the strength of the electronic coupling. Reasonable agreement is found between experiment and theory even though the nonadiabatic couplings are neglected. The resonant Auger electron scattering, which is essentially due to decay from dissociative core-excited states, is accompanied by strong lifetime-vibrational and intermediate electronic state interferences as well as an interference with the direct photoionization channel. The overall agreement between the experimental Auger spectra and the calculated spectra supports the mixed diabatic/adiabatic picture.

11.
J Chem Phys ; 127(12): 124310, 2007 Sep 28.
Article in English | MEDLINE | ID: mdl-17902906

ABSTRACT

The beta angular asymmetry and D dichroic asymmetry parameters of the methyl-oxirane highest occupied molecular orbital (HOMO) band have been experimentally investigated with vibrational resolution using synchrotron radiation. A theoretical calculation of the Franck-Condon factors between vibrational ground state and different ionic vibrational states, in the Born-Oppenheimer harmonic approximation, has been performed in order to gain information on the vibrational states mainly involved in the HOMO photoelectron band. The general good agreement between theoretical and experimental results allows a reliable assignment of the major features. The experimental determination of beta and D shows their dependence on the different final vibrational states. This paper reports, for the first time, experimental evidence of the dependence of the dichroic D parameter on the vibrational excitation of the ion.

12.
J Chem Phys ; 123(6): 64314, 2005 Aug 08.
Article in English | MEDLINE | ID: mdl-16122315

ABSTRACT

The below-threshold region in core-excited O2 is very complex, consisting of a multitude of exchange-split states with mixed molecular orbital-Rydberg character. We have investigated the nature of these intermediate states by resonant Auger spectroscopy. In particular, we have obtained constant-atomic-final-state yield curves for several atomic peaks in the electron decay spectra which are stemming from ultrafast dissociation. The relative intensity of Auger decay leading to atomic final states is considered a signature of the relative weight of the sigma* character. This method allows one to "filter out" intermediate states with dissociative character. Extensive calculations have been performed by multi-reference configuration interaction at different interatomic distances in order to evaluate the potential curves of the core-excited states and propose a qualitative description of the dissociative molecular dynamics. The calculations show that the core-excited states have a relevant admixture of excitations to orbitals with Rydberg character and excitations to the sigma* orbital with different spin couplings. A diabatization of the adiabatic potential curves shows that the coupling between Rydberg and sigma* diabatic states is very different at the different crossing points and ultrafast dissociation occurs more easily on the lowest sigma* diabatic potential curve. As a consequence, the observation of atomic peaks only in the lower-energy region of the absorption curve is well justified.

13.
J Chem Phys ; 122(8): 84306, 2005 Feb 22.
Article in English | MEDLINE | ID: mdl-15836038

ABSTRACT

Vibrationally resolved spectra have been obtained for the lowest-lying cationic states X (2)B(1), A (2)A(1), and B (2)B(2) of the water molecule reached after participator resonant Auger decay of core-excited states. The angular distribution has been measured of the first four vibrational components of the X state in the photon energy regions including the O 1s-->4a(1) and the O 1s-->2b(2) core excitations, and for different portions of the vibrational envelope of the B state in the photon energy region including the O 1s-->2b(2) core excitation. For the X state, a large relative spread in beta values of the different vibrational components is observed across both resonances. For the B state, a very different trend is observed for the high binding energy side and the low binding energy side of the related spectral feature as a function of photon energy. A theoretical method based on the scattering K matrix has been used to calculate both the photoabsorption spectrum and the beta values, by taking both interference between direct and resonant photoemission and vibrational/lifetime interference into account. The numerical results show qualitative agreement with the trends detected in the experimental values and explain the conspicuous variations of the beta values primarily in terms of coupling between direct and resonant photoemission by interaction terms of different sign for different final vibrational states.

14.
Phys Rev Lett ; 88(24): 243002, 2002 Jun 17.
Article in English | MEDLINE | ID: mdl-12059294

ABSTRACT

The O 1s-->sigma* transition below the O K-edge in O2 has been investigated by absorption, constant ionic state (CIS) experiments, and extensive configuration interaction calculations. CIS scans of the three lowest-lying final states reached in resonant Auger decay provide a wealth of information on energy range, symmetry, and spin multiplicity of the intermediate states with sigma* character. We conclude that the identification of only two exchange-split components is inadequate because a complex manifold of states with sigma* character exists with no unique energy difference between related states.

15.
J Synchrotron Radiat ; 6(Pt 3): 708-10, 1999 May 01.
Article in English | MEDLINE | ID: mdl-15263432
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