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Nat Commun ; 10(1): 147, 2019 01 11.
Article in English | MEDLINE | ID: mdl-30635558

ABSTRACT

In the presence of health threats, precision public health approaches aim to provide targeted, timely, and population-specific interventions. Accurate surveillance methodologies that can estimate infectious disease activity ahead of official healthcare-based reports, at relevant spatial resolutions, are important for achieving this goal. Here we introduce a methodological framework which dynamically combines two distinct influenza tracking techniques, using an ensemble machine learning approach, to achieve improved state-level influenza activity estimates in the United States. The two predictive techniques behind the ensemble utilize (1) a self-correcting statistical method combining influenza-related Google search frequencies, information from electronic health records, and historical flu trends within each state, and (2) a network-based approach leveraging spatio-temporal synchronicities observed in historical influenza activity across states. The ensemble considerably outperforms each component method in addition to previously proposed state-specific methods for influenza tracking, with higher correlations and lower prediction errors.


Subject(s)
Epidemiological Monitoring , Influenza, Human/epidemiology , Data Analysis , Databases, Factual , Electronic Health Records , Humans , Internet , Search Engine , United States/epidemiology
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