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1.
Front Vet Sci ; 10: 1225826, 2023.
Article in English | MEDLINE | ID: mdl-37546336

ABSTRACT

The aim of this study was to investigate the prevalence of ESBL/AmpC-producing E. coli and the resistance pattern of commensal E. coli, as well as the link between the use of antibiotics (AMU) and the occurrence of resistance in E. coli on Austrian dairy farms. AMU data from 51 farms were collected over a one-year period in 2020. Fecal samples were collected from cows, pre-weaned and weaned calves in 2020 and 2022. Samples were then analyzed using non-selective and selective agar plates, E. coli isolates were confirmed by MALDI-TOF analysis. Broth microdilution was used for antimicrobial susceptibility testing. The AMU of each farm was quantified as the number of Defined Daily Doses (nDDDvet) and Defined Course Doses (nDCDvet) per cow and year. Cephalosporins (mean 1.049; median 0.732 DDDvet/cow/year) and penicillins (mean 0.667; median 0.383 DDDvet/cow/year) were the most frequently used antibiotics on these farms, followed by tetracyclines (mean 0.275; median 0.084 DDDvet/cow/year). In 2020, 26.8% of the E. coli isolated were resistant to at least one antibiotic class and 17.7% of the isolates were classified as multidrug resistant (≥3 antibiotic classes). Out of 198 E. coli isolates, 7.6% were identified as extended-spectrum/AmpC beta-lactamase (ESBL/AmpC) producing E. coli. In 2022, 33.7% of E. coli isolates showed resistance to at least one antibiotic and 20.0% of isolates displayed multidrug resistance. Furthermore, 29.5% of the samples carried ESBL/AmpC-producing E. coli. In 2020 and 2022, the most frequently determined antibiotic resistances among commensal E. coli isolates were to tetracyclines, sulfonamides and penicillins. In addition, pre-weaned calves had the highest resistance rates in both years. Statistical analyses showed a significant association between low and high use AMU classifications for penicillins (in nDDDvet/cow/year) and their respective resistance among commensal E. coli isolates in 2020 (p = 0.044), as well as for sulfonamide/trimethoprim (p = 0.010) and tetracyclines (p = 0.042). A trend was also noted between the total amount of antibiotics used on farm in 2020 (by nDDDvet/cow/year) and multidrug resistances in commensal E. coli isolated on farm that year (p = 0.067). In conclusion, the relationship between AMU and antimicrobial resistance (AMR) on dairy farms continues to be complex and difficult to quantify.

2.
Sci Rep ; 13(1): 9623, 2023 06 14.
Article in English | MEDLINE | ID: mdl-37316653

ABSTRACT

Animal movements represent a major risk for the spread of infectious diseases in the domestic swine population. In this study, we adopted methods from social network analysis to explore pig trades in Austria. We used a dataset of daily records of swine movements covering the period 2015-2021. We analyzed the topology of the network and its structural changes over time, including seasonal and long-term variations in the pig production activities. Finally, we studied the temporal dynamics of the network community structure. Our findings show that the Austrian pig production was dominated by small-sized farms while spatial farm density was heterogeneous. The network exhibited a scale-free topology but was very sparse, suggesting a moderate impact of infectious disease outbreaks. However, two regions (Upper Austria and Styria) may present a higher structural vulnerability. The network also showed very high assortativity between holdings from the same federal state. Dynamic community detection revealed a stable behavior of the clusters. Yet trade communities did not correspond to sub-national administrative divisions and may be an alternative zoning approach to managing infectious diseases. Knowledge about the topology, contact patterns, and temporal dynamics of the pig trade network can support optimized risk-based disease control and surveillance strategies.


Subject(s)
City Planning , Disease Outbreaks , Swine , Animals , Austria/epidemiology , Farms , Health Behavior
3.
Int J Mol Sci ; 23(19)2022 Sep 24.
Article in English | MEDLINE | ID: mdl-36232576

ABSTRACT

Antimicrobial resistance (AMR) is a public health issue attributed to the misuse of antibiotics in human and veterinary medicine. Since AMR surveillance requires a One Health approach, we sampled nine interconnected compartments at a hydrological open-air lab (HOAL) in Austria to obtain six bacterial species included in the WHO priority list of antibiotic-resistant bacteria (ARB). Whole genome sequencing-based typing included core genome multilocus sequence typing (cgMLST). Genetic and phenotypic characterization of AMR was performed for all isolates. Eighty-nine clinically-relevant bacteria were obtained from eight compartments including 49 E. coli, 27 E. faecalis, 7 K. pneumoniae and 6 E. faecium. Clusters of isolates from the same species obtained in different sample collection dates were detected. Of the isolates, 29.2% were resistant to at least one antimicrobial. E. coli and E. faecalis isolates from different compartments had acquired antimicrobial resistance genes (ARGs) associated with veterinary drugs such as aminoglycosides and tetracyclines, some of which were carried in conjugative and mobilizable plasmids. Three multidrug resistant (MDR) E. coli isolates were found in samples from field drainage and wastewater. Early detection of ARGs and ARB in natural and farm-related environments can identify hotspots of AMR and help prevent its emergence and dissemination along the food/feed chain.


Subject(s)
Anti-Bacterial Agents , Veterinary Drugs , Aminoglycosides , Angiotensin Receptor Antagonists , Angiotensin-Converting Enzyme Inhibitors , Animals , Anti-Bacterial Agents/pharmacology , Austria , Bacteria/genetics , Drug Resistance, Bacterial/genetics , Drug Resistance, Multiple, Bacterial/genetics , Escherichia coli/genetics , Humans , Microbial Sensitivity Tests , Tetracyclines , Wastewater , Whole Genome Sequencing
4.
Antibiotics (Basel) ; 11(2)2022 Feb 08.
Article in English | MEDLINE | ID: mdl-35203818

ABSTRACT

Antimicrobial use in livestock production systems is increasingly scrutinised by consumers, stakeholders, and the veterinary profession. In Austria, veterinarians dispensing antimicrobials for use in food-producing animals have been required to report these drugs since 2015. Here, we describe the national monitoring systems and the results obtained for Austrian pig production over a six-year period. Antimicrobial dispensing is described using the mass-based metric, milligrams per population correction unit (mg/PCU) and the dose-based metric, Defined Daily Dose (DDDvet) per year and divided into the European Medicines Agency's prudent use categories. Pig production was divided into breeding units, fattening farms, farrow-to-finish farms, and piglet-rearing systems. Over all six years and all pig production systems, the mean amount of antimicrobials dispensed was 71.6 mg/PCU or 2.2 DDDvet per year. Piglet-rearing systems were found to have the highest levels of antimicrobial dispensing in DDDvet, as well as the largest proportion of Category B antimicrobials, including polymyxins. Although progress has been made in promoting a more prudent use of antimicrobials in veterinary medicine in Austria, further steps need to be taken to proactively improve animal health and prevent disease to reduce the need for antimicrobials, particularly those critically important for human medicine, in the future.

5.
Article in English | MEDLINE | ID: mdl-34077339

ABSTRACT

Probabilistic exposure and risk assessment of chemical hazards in the diet have increasingly gained ground in recent years as a pragmatic approach for the approximation of reality. This work presents the outcomes of a project which aimed at applying probabilistic techniques for basic modelling of chronic dietary exposure to food contaminants following EFSA guidance. These techniques, based on Monte Carlo Risk Assessment (MCRA) software and on the programming language R, were employed for the risk assessment of cadmium for Austrian adults, enabling the validation and the critical comparison of the two approaches. Harmonisation and optimisation of procedures, refinement of exposure assessment skills and confidence in the results were the main benefits. Data amount and validity were identified as critical parameters, influencing the precision of the results. Cadmium was selected as a case study due to its toxicological properties, its ubiquitous presence in food and the availability of Austrian occurrence data. Similar exposure and risk estimates were generated through MCRA and R in alternative optimistic and pessimistic exposure scenarios, suggesting low levels of concern, except for vegetarians, whose upper tail exposures are close to the established Tolerable Weekly Intake. However, as occurrence data gaps have been identified as the major element of uncertainty, the estimated exposure and risk levels are characterised as underestimated. Grains and grain-based products, potatoes and leafy vegetables are the main contributors to the intake. The results will contribute to risk management and to a future refinement of the assessment.


Subject(s)
Cadmium/adverse effects , Dietary Exposure/statistics & numerical data , Food Contamination/analysis , Risk Assessment/methods , Risk Management/statistics & numerical data , Adolescent , Adult , Aged , Austria , Diet/statistics & numerical data , Dietary Exposure/adverse effects , Edible Grain/chemistry , Humans , Middle Aged , Models, Statistical , Monte Carlo Method , Population Surveillance , Software , Solanum tuberosum/chemistry , Vegetables/chemistry
6.
Vet Rec ; 189(8): e508, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34057214

ABSTRACT

BACKGROUND: The increase in bacteria that are resistant to antimicrobials-often selected for a high level of antimicrobial uses (AMUs) in human beings or food-producing animals-is a global concern. The Austrian Poultry Health Service (QGV) has established a database containing comprehensive information on poultry flocks in Austria. METHODS: AMU in 32,411 broiler flocks and 2946 turkey flocks between 2013 and 2019 is analysed by calculating different metrics, including the treatment incidence TI1000 . Furthermore, the Austrian benchmarking system for poultry is introduced. RESULTS: Annual AMU in broilers decreased from 1030.8 kg of active ingredient to 762.5 kg between 2013 and 2016 but rose again to 1165.0 kg in 2019; while for turkeys annual AMU dropped from 1196.4 kg to 569.0 kg between 2013 and 2019. At the same time, the proportion of treated flocks decreased from 34.2% to 24.8% for broilers and from 54.3% to 44.0% for turkeys. In both broilers and turkeys, the most frequently used antimicrobial class, according to the TI1000 unit, in broilers and turkeys is polymyxins. CONCLUSION: Calculating different metrics enables a deeper insight into AMU. Total AMU reduced without legislation but the increase of AMU in broiler production needs further investigation.


Subject(s)
Anti-Infective Agents , Poultry Diseases , Animals , Anti-Bacterial Agents/therapeutic use , Anti-Infective Agents/therapeutic use , Austria/epidemiology , Chickens , Poultry , Poultry Diseases/drug therapy , Poultry Diseases/epidemiology , Turkeys
7.
Inhal Toxicol ; 33(4): 128-142, 2021 03.
Article in English | MEDLINE | ID: mdl-33957849

ABSTRACT

OBJECTIVE: The objective of this study was the assessment of risks from inhalation exposure of Austrian smokers to cadmium through established toxicological approaches with emphasis on the exposure assessment component, which is challenging regarding the actual amount of metal that is inhaled and the simulation of the smoking pattern. MATERIALS AND METHODS: Exposure assessment comprised an estimation of the proportion of cadmium inhaled through smoking and actual occurrence data in tobacco products and survey smoking habits, which were integrated in alternative scenarios through a deterministic and a probabilistic Monte Carlo simulation method. Risks were characterized through the comparison of the exposure with health-based guidance values, as well as through the assessment of the excess lifetime cancer risk (ELCR), the non-cancer hazard quotient (NCHQ), and the margin of exposure (MOE). The strengths, the uncertainties, and the limitations of the different methodologies were discussed. RESULTS AND DISCUSSION: Upper exposures are close or exceed the Permitted Daily Exposure. Respiratory ELCRs are unacceptable compared to the benchmark range of 1.0E-06 to 1.0E-04. Renal and respiratory NCHQs exceed the target value of 1.0 by 3- to 17-fold. MOEs are not protective enough for cancer and non-cancer effects. The amount of cadmium that reaches the lung is a key source of uncertainty. CONCLUSION: Probabilistic estimates provide a refined capture of the actual inhalation exposure. Risk estimates and gender and age profiles are alarming, especially for young smokers. Application of toxicological approaches, combined with realistic assessment of the inhalation exposure levels, can support risk communication and management.


Subject(s)
Cadmium/administration & dosage , Computer Simulation , Models, Biological , Tobacco Smoking/adverse effects , Austria , Humans , Inhalation Exposure , Monte Carlo Method , Risk Assessment , Smokers , Toxicological Phenomena
8.
Front Vet Sci ; 7: 540, 2020.
Article in English | MEDLINE | ID: mdl-33195490

ABSTRACT

The acknowledgment of antimicrobial resistance (AMR) as a major health challenge in humans, animals and plants, has led to increased efforts to reduce antimicrobial use (AMU). To better understand factors influencing AMR and implement and evaluate stewardship measures for reducing AMU, it is important to have sufficiently detailed information on the quantity of AMU, preferably at the level of the user (farmer, veterinarian) and/or prescriber or provider (veterinarian, feed mill). Recently, several countries have established or are developing systems for monitoring AMU in animals. The aim of this publication is to provide an overview of known systems for monitoring AMU at farm-level, with a descriptive analysis of their key components and processes. As of March 2020, 38 active farm-level AMU monitoring systems from 16 countries were identified. These systems differ in many ways, including which data are collected, the type of analyses conducted and their respective output. At the same time, they share key components (data collection, analysis, benchmarking, and reporting), resulting in similar challenges to be faced with similar decisions to be made. Suggestions are provided with respect to the different components and important aspects of various data types and methods are discussed. This overview should provide support for establishing or working with such a system and could lead to a better implementation of stewardship actions and a more uniform communication about and understanding of AMU data at farm-level. Harmonization of methods and processes could lead to an improved comparability of outcomes and less confusion when interpreting results across systems. However, it is important to note that the development of systems also depends on specific local needs, resources and aims.

9.
Food Chem Toxicol ; 145: 111719, 2020 Nov.
Article in English | MEDLINE | ID: mdl-32889018

ABSTRACT

Nitrates occur in food naturally, as contaminants or additives. The health implications attributed to ingested nitrates result primarily from their conversion into nitrites and subsequent methemoglobinemia, carcinogenicity induced by N-nitroso-compounds and cardiovascular, endocrine, metabolic, reproductive and developmental effects. The present study comprises a probabilistic tiered risk assessment of nitrates for Austrian adults through the diet with the application of the Monte Carlo simulation method in alternative optimistic and pessimistic scenarios. Risk estimates are of concern regarding the upper exposures, which exceed the Acceptable Daily Intake (ADI) in almost all scenarios and population groups. Exposure is elevated when all dietary sources are considered and the ADI is exceeded by already the mean intake for vegetarians. Leafy vegetables are major contributors to the intake. Contribution of cured meat is very low. Estimates of the conversion of nitrates into nitrites were used to assess the combined exposure to both species. When the average intake of nitrates and nitrites is considered, the mean exposure to nitrites is lower or close to the ADI for individuals with average conversion capacity. However, upper tail combined intake can lead to a multifold exceedance of the ADI of nitrites for individuals with both high and average conversion capacity.


Subject(s)
Dietary Exposure/analysis , Nitrates/metabolism , Nitrites/metabolism , Adult , Aged , Animals , Austria , Female , Food Additives/analysis , Food Additives/metabolism , Humans , Male , Meat Products/analysis , Middle Aged , Nitrates/analysis , Nitrites/analysis , No-Observed-Adverse-Effect Level , Risk Assessment , Vegetables/metabolism , Young Adult
10.
Food Chem Toxicol ; 143: 111480, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32533995

ABSTRACT

Nitrites are present in the food chain as naturally occurring species or contaminants. Additionally, sodium and potassium nitrites are authorised food additives. Nitrites exert acute toxicity through methemoglobinemia or cardiovascular effects, chronic toxicity associated with endocrine, reproductive and developmental effects and have been classified as probable gastric carcinogens. Ingestion of food and water are the main sources of human exposure. This study comprises a tiered risk assessment of nitrites for the Austrian adult population, along with the identification of the food categories most contributing to their intake. The dietary exposure, based on Austrian occurrence and consumption data, was modelled with the Monte Carlo simulation method. In an additional scenario, data gaps were addressed with the usage of occurrence data published by the European Food Safety Authority and from the available literature to account for the exposure from all sources. Risk estimates regarding only the exposure to nitrite additives and to contaminated water indicate low level of concern. However, when exposure from all sources is considered, the estimated exposure is elevated and exceeds the Acceptable Daily Intake for high consumers. Mean exposure attributed to the use of nitrites as additives accounts for only a very small proportion of the total intake.


Subject(s)
Diet , Dietary Exposure , Food Contamination , Meat Products/analysis , Models, Biological , Nitrites/administration & dosage , Adult , Animals , Austria , Food Additives/analysis , Food Handling , Humans , Nitrites/toxicity , No-Observed-Adverse-Effect Level , Risk Assessment , Software
11.
Animals (Basel) ; 9(10)2019 Sep 20.
Article in English | MEDLINE | ID: mdl-31547125

ABSTRACT

Antimicrobial use in livestock production is a controversial subject. While antimicrobials should be used as little as possible, it is still necessary, from both an animal health and welfare point of view, to treat infected animals. The study presented here aimed to analyse antimicrobial use on Austrian dairy farms by calculating the number of Defined Course Doses (DCDvet) administered per cow and year for dry cow therapy. Antimicrobial use was analysed by production system and whether farmers stated that they used blanket dry cow therapy (i.e., all cows in the herd were treated) or selective dry cow therapy (i.e., only cows with a positive bacteriological culture or current/recent history of udder disease were treated). A statistically significant difference (p < 0.001) was determined between antimicrobial use for blanket (median DCDvet/cow/year: 0.88) and selective dry cow therapy (median DCDvet/cow/year: 0.41). The difference between antimicrobial use on conventional and organic farms for dry cow therapy as a whole, however, was not statistically significant (p = 0.22) (median DCDvet/cow/year: 0.68 for conventional; 0.53 for organic farms). This analysis demonstrates that selective dry cow therapy leads to a lower overall use of antimicrobials and can assist in a more prudent use of antimicrobials on dairy farms.

12.
J Dairy Sci ; 102(5): 4452-4463, 2019 May.
Article in English | MEDLINE | ID: mdl-30852026

ABSTRACT

Bovine mastitis is the most frequently reported disease among dairy cows worldwide. Treatment of udder disease often involves the use of antimicrobial substances, which is difficult to justify with respect to their possible effect on the development and spread of antimicrobial resistance. Prevention of udder disease is therefore always preferable to treatment. The study presented here statistically analyzed the probability of mastitis occurring during 3,049 lactation periods on 208 farms and attempted to ascertain which on-farm management factors contributed to the occurrence of this udder disease in Austria. Farm management was assessed via online surveys completed by 211 farmers (211/251; response rate = 84.1%) as well as national milk performance recorders observing milking technique and herd veterinarians evaluating farm hygiene levels. Veterinary treatment records were used as a basis for mastitis reporting. The analysis was carried out using a generalized linear mixed model. The study population was not randomized but was part of a larger observational study. More than three fourths of the study farms were run conventionally, and the remainder were organic. Freestalls (and straw yards) made up 66% of the study population, and 34% of farms had tiestalls. Herd size ranged from 8 to 94 dairy cows (mean = 26.9; median = 21), with the most common breed (74% of all cows) being dual-purpose Simmental (Austrian Fleckvieh). A mastitis risk of 14.4% was reported via veterinary treatment records. The following factors were shown to be associated with a reduction in the risk of mastitis occurring: regular access to pasture (odds ratio, OR = 0.73), automatic milking machine shut-off (OR 0.67), and access to feed immediately after milking (OR = 0.43). Detrimental effects, which were likely to increase the probability of mastitis occurring, included lactation number (OR = 1.18), farming part time (OR = 1.55), and udders on the farm being classed by herd veterinarians as medium to severely soiled (OR = 1.47). The study presented here was able to confirm several management factors recommended to reduce the probability of mastitis occurring during a cow's lactation period, with particular relevance for the small dairy herds common to Austria.


Subject(s)
Dairying/methods , Mastitis, Bovine/epidemiology , Animals , Austria/epidemiology , Cattle , Farms , Female , Linear Models , Risk Factors
13.
PeerJ ; 5: e4072, 2017.
Article in English | MEDLINE | ID: mdl-29158993

ABSTRACT

BACKGROUND: Antimicrobial use in livestock production is an important contemporary issue, which is of public interest worldwide. Antimicrobials are not freely available to Austrian farmers and can only be administered to livestock by veterinarians, or by farmers who are trained members of the Animal Health Service. Since 2015, veterinarians have been required by law to report antimicrobials dispensed to farmers for use in food-producing animals. The study presented here went further than the statutory framework, and collected data on antimicrobials dispensed to farmers and those administered by veterinarians. METHODS: Seventeen veterinary practices were enrolled in the study via convenience sampling. These veterinarians were asked to contact interested dairy farmers regarding participation in the study (respondent-driven sampling). Data were collected from veterinary practice software between 1st October 2015 and 30th September 2016. Electronic data (89.4%) were transferred via an online interface and paper records (10.6%) were entered by the authors. Antimicrobial treatments with respect to udder disease were analysed by number of defined daily doses per cow and year (nDDDvet/cow/year), based on the European Medicines Agency technical unit, Defined Daily Dose for animals (DDDvet). Descriptive statistics and the Wilcoxon rank sum test were used to analyse the results. RESULTS: Antimicrobial use data from a total of 248 dairy farms were collected during the study, 232 of these farms treated cows with antibiotics; dry cow therapy was excluded from the current analysis. The mean number of DDDvet/cow/year for the antimicrobial treatment of all udder disease was 1.33 DDDvet/cow/year. Of these treatments, 0.73 DDDvet/cow/year were classed as highest priority critically important antimicrobials (HPCIAs), according to the World Health Organization (WHO) definition. The Wilcoxon rank sum test determined a statistically significant difference between the median number of DDDvet/cow/year for acute and chronic mastitis treatment (W = 10,734, p < 0.001). The most commonly administered antimicrobial class for the treatment of acute mastitis was beta-lactams. Intramammary penicillin was used at a mean of 0.63 DDDvet/cow/year, followed by the third generation cephalosporin, cefoperazone, (a HPCIA) at 0.60 DDDvet/cow/year. Systemic antimicrobial treatments were used at a lower overall level than intramammary treatments for acute mastitis. DISCUSSION: This study demonstrated that Austrian dairy cows in the study population were treated with antimicrobial substances for udder diseases at a relatively low frequency, however, a substantial proportion of these treatments were with substances considered critically important for human health. While it is vital that sick cows are treated, reductions in the overall use of antimicrobials, and critically important substances in particular, are still possible.

14.
Berl Munch Tierarztl Wochenschr ; 129(5-6): 185-95, 2016.
Article in English | MEDLINE | ID: mdl-27344910

ABSTRACT

The use of antibiotics in livestock production is coming under growing criticism. Beside overall antimicrobial use, specific substances listed by the WHO as "highest priority critically important antimicrobials" (HPCIAs)--these include fluoroquinolones, macrolides, 3rd and 4th generation cephalosporins, as well as glycopeptides--have been placed under specific restrictions and should only be applied in particular cases according to strict indication criteria. In this study, the consumption of antimicrobial substances on Austrian dairy farms was evaluated quantitatively. The data covered 8,027 prescription records on the use of antibiotics on 465 dairy farms. Eleven veterinary practices provided data from between four to 27 months during the period from 2008 to 2010 and the total consumption of antimicrobials was estimated. The amount of active substance(s) in grams used per livestock unit (g/LU) per year and the number of product-related daily doses used per livestock unit (n PrDD(LU)/LU) per year were determined as units of measurement. These parameters were estimated by applying Monte Carlo simulation techniques, respecting variances in annual working days of the veterinary practices as well as variances in the proportion of non-treated populations. Total antimicrobial consumption in the population-at-risk was determined to be 2.59 g/LU and 1.30 PrDD(LU)/LU per year. HPCIAs were used at a proportion of 24.6% (0.31 PrDD(LU)/LU) of the total consumption of antimicrobials for systemic and intramammary use. Of these, 3rd and 4th generation cephalosporins were most frequently administered, particularly for the treatment of mastitis and foot diseases. The total consumption of antimicrobials in Austrian dairy cattle production is negligible compared to their use in pig and poultry production systems. However, the use of HPCIAs, especially 3rd and 4th generation cephalosporins, should be minimised further.


Subject(s)
Dairying/methods , Dairying/statistics & numerical data , Prescriptions/veterinary , Veterinary Drugs/administration & dosage , Animals , Anti-Infective Agents , Austria , Cattle , Dairying/standards , Female , Prescriptions/statistics & numerical data
15.
Berl Munch Tierarztl Wochenschr ; 129(5-6): 258-68, 2016.
Article in German | MEDLINE | ID: mdl-27344920

ABSTRACT

The effectivity of different sampling schemes for the early detection of the introduction of porcine reproductive and respiratory syndrome virus into a pig herd was evaluated using Monte Carlo simulation. Within a theoretical breeding herd of 300 animals, disease transmission was simulated using a stochastic SEIR model incorporating actual animal movement data. The following parameters were evaluated for different sample sizes, sampling frequencies and diagnostic procedures (ELISA, PCR): the time from virus introduction until detection, the daily detection probability and the number of holdings to which infected animals are shipped before the disease is detected. The results show that the sample size has an influence on early detection. The biggest effects are, however, achieved by shortening the sampling intervals. The median detection time is approximately ten days shorter for PCR than for ELISA. If, however, the sampling intervals are chosen too wide there is a chance of overlooking the disease using PCR alone.


Subject(s)
Porcine Reproductive and Respiratory Syndrome/diagnosis , Porcine Reproductive and Respiratory Syndrome/virology , Porcine respiratory and reproductive syndrome virus/isolation & purification , Animal Husbandry , Animals , Computer Simulation , Polymerase Chain Reaction , Swine
16.
Environ Pollut ; 206: 342-51, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26232739

ABSTRACT

Antibiotic resistance genes may be considered as environmental pollutants if anthropogenic emission and manipulations increase their prevalence above usually occurring background levels. The prevalence of aph(3')-IIa/nptII and aph(3')-IIIa/nptIII - frequent marker genes in plant biotechnology conferring resistance to certain aminoglycosides - was determined in Austrian soils from 100 maize and potato fields not yet exposed to but eligible for GMO crop cultivation. Total soil DNA extracts were analysed by nptII/nptIII-specific TaqMan real time PCR. Of all fields 6% were positive for nptII (median: 150 copies/g soil; range: 31-856) and 85% for nptIII (1190 copies/g soil; 13-61600). The copy-number deduced prevalence of nptIII carriers was 14-fold higher compared to nptII. Of the cultivable kanamycin-resistant soil bacteria 1.8% (95% confidence interval: 0-3.3%) were positive for nptIII, none for nptII (0-0.8%). The nptII-load of the studied soils was low rendering nptII a typical candidate as environmental pollutant upon anthropogenic release into these ecosystems.


Subject(s)
Anti-Bacterial Agents/analysis , Crops, Agricultural/growth & development , Drug Resistance, Bacterial/genetics , Genes, Bacterial , Soil Microbiology , Soil Pollutants/analysis , Soil/chemistry , Austria , Crops, Agricultural/genetics , DNA, Bacterial/genetics , Kanamycin Resistance/genetics , Soil/standards , Solanum tuberosum/genetics , Solanum tuberosum/growth & development , Zea mays/genetics , Zea mays/growth & development
17.
J Med Microbiol ; 63(Pt 2): 210-217, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24194558

ABSTRACT

The aminoglycoside phosphotransferase aph(3')-IIa primarily inactivates kanamycin and neomycin, whilst aph(3')-IIIa also inactivates amikacin. The aim of this study was to determine the frequency of both resistance genes in major human pathogens to obtain their baseline prevalence in the gene pool of these bacterial populations in Austria. In total, 10 541 Escherichia coli, Enterococcus faecalis, Enterococcus faecium, Pseudomonas aeruginosa, Salmonella enterica subsp. enterica and Staphylococcus aureus isolates were collected representatively without selection bias between 2008 and 2011. Isolates were analysed by aph(3')-IIIa/nptIII- and aph(3')-IIa/nptII-specific TaqMan real-time PCR. For positive strains, MICs using Etests were performed and resistance gene sequences were determined. The overall prevalence of aph(3')-IIIa/nptIII was 1.62 % (95 % confidence interval: 1.38-1.88 %). In Escherichia coli, enterococci, Staphylococcus aureus, P. aeruginosa and Salmonella spp., the aph(3')-IIIa/nptIII prevalence was 0.47 % (0-1.47 %), 37.53 % (32.84-42.40 %), 2.90 % (1.51-5.02 %), 0 % (0-0.32 %) and 0 % (0-0.037 %), respectively. Eleven of a total of 169 carriers showed single-nucleotide polymorphisms in the resistance allele. The overall prevalence of aph(3')-IIa/nptII was 0.0096 % (0-0.046 %). Escherichia coli (0-0.70 %), enterococci (0-0.75 %), Staphylococcus aureus (0-0.73 %) and P. aeruginosa (0-0.32 %) did not carry aph(3')-IIa. A single Salmonella isolate was positive, resulting in an aph(3')-IIa prevalence of 0.013 % (0-0.058 %). aph(3')-IIIa/nptIII carriers were moderately prevalent in the strains tested except for in enterococci, which appeared to be an important reservoir for aph(3')-IIIa. aph(3')-IIa/nptII genes were detected at clinically irrelevant frequencies and played no significant role in the aminoglycoside resistance gene pool during the observation period.


Subject(s)
Drug Resistance, Bacterial , Gram-Negative Bacteria/enzymology , Gram-Negative Bacterial Infections/epidemiology , Gram-Positive Bacteria/enzymology , Gram-Positive Bacterial Infections/epidemiology , Kanamycin Kinase/genetics , Aminoglycosides/pharmacology , Anti-Bacterial Agents/pharmacology , Austria/epidemiology , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Gram-Negative Bacteria/drug effects , Gram-Negative Bacteria/genetics , Gram-Negative Bacteria/isolation & purification , Gram-Negative Bacterial Infections/microbiology , Gram-Positive Bacteria/drug effects , Gram-Positive Bacteria/genetics , Gram-Positive Bacteria/isolation & purification , Gram-Positive Bacterial Infections/microbiology , Humans , Microbial Sensitivity Tests , Molecular Sequence Data , Prevalence , Real-Time Polymerase Chain Reaction , Sequence Analysis, DNA
18.
Berl Munch Tierarztl Wochenschr ; 127(9-10): 375-83, 2014.
Article in English | MEDLINE | ID: mdl-25868165

ABSTRACT

The World Health Organization lists antimicrobial substances which are essential for the treatment of specific infections in humans as "highest priority critically important antimicrobials" (HPCIAs): macrolides, fluoroquinolones, 3rd and 4th generation cephalosporins as well as glycopeptid antibacterials. The use of these substances in livestock husbandry should be restricted in order to minimise the risk of antimicrobial resistance. To date, there is little knowledge about the amounts of HPCIAs used in animal husbandry and the different animal species and diagnoses these antimicrobials are prescribed for. In a retrospective study, drug application data recorded from 2008 until 2011 from 75 conventional pig farms were evaluated. Data were assessed directly by the farmer at farm-level. The annual antimicrobial consumption was expressed in "weight of active substance(s) in [mg]" and "number of Daily Doses". Results were referred to the animal biomass, evaluated per pig age class (piglets, weaners, fattening pigs < 60 kg biomass; fattening pigs > 60 kg biomass, sows, boars) and broken down to some variables such as the substance class and the therapy indication. The focus was especially laid on the HPCIAs. The total usage of the HPCIAs in the study population was on average 3.0 mg/ kg/year; 1.1 UDD(kg)/kg/year; 0.2 ADD(kg)/kg/year and 0.6 PrDD(kg)/kg/year. This represents about 9%, 22%, 12% and 22% of total antimicrobial consumption, respectively, depending on the unit of measurement. Fattening farms showed the highest consumption of the named substances. The main part of the HPCIAs (nADD(kg)/year) was applied to weaners, piglets and fattening pigs < 60 kg. They played an important role in the therapies of piglets (approximately 40% of the total antimicrobial consumption in piglets). Macrolides played the major role within the HPCIAs and were mainly used for digestive tract diseases. A not negligible portion of macrolides was prescribed for metaphylactic and prophylactic measures.


Subject(s)
Animal Husbandry/statistics & numerical data , Anti-Bacterial Agents/administration & dosage , Veterinary Drugs/administration & dosage , Animals , Austria/epidemiology , Drug Resistance, Bacterial , Retrospective Studies , Sus scrofa , Swine , Swine Diseases/drug therapy , Swine Diseases/epidemiology
19.
Berl Munch Tierarztl Wochenschr ; 124(5-6): 228-35, 2011.
Article in English | MEDLINE | ID: mdl-22059294

ABSTRACT

Bluetongue disease (BT) was introduced into Central Europe in the summer of 2006 and has since affected most European countries. In this study we analysed the distribution of the biting midge vector Culicoides spp. in Austria and modelled Bluetongue disease risk zones. Culicoides spp. abundance data was collected from weekly catches of 14 months from 54 trapping locations. The corresponding weather data mean temperature (p < 0.001), wind (p < 0.001), relative humidity (p = 0.019) and altitude (p = 0.059) were identified as predictors on Culicoides spp. distribution in a regression model (R 2.8.0). The majority of catches were detected at temperatures above 10 degrees C and at relative humidities between 65-80%. The point data of these parameters originating from 186 meteorological stations were interpolated using the Geostatistical Analyst Kriging tool (ESRI ArcGIS 9.3). To create seasonal risk maps we overlaid regions with optimal temperature and humidity conditions with domestic ruminants density data. Our results show that the summer season holds the greatest risk of a BT epidemic with 25.9% of the analysed area providing optimal conditions for vector abundance and 12.4% showing contact risk with ruminant hosts. This project (1) provides fundamental data on the Culicoides spp. distribution in Austria, (2) determines limiting climatic parameters on vector abundance and (3) identifies risk areas by including areas of possible host-parasite-interactions. These high-risk areas can subsequently be given special attention for precautionary monitoring and surveillance measures.


Subject(s)
Bluetongue/epidemiology , Ceratopogonidae/physiology , Insect Vectors/physiology , Ruminants , Altitude , Animals , Austria/epidemiology , Bluetongue/transmission , Humidity , Risk Factors , Seasons , Temperature
20.
Berl Munch Tierarztl Wochenschr ; 123(11-12): 468-76, 2010.
Article in German | MEDLINE | ID: mdl-21141276

ABSTRACT

Over a period of 22 months 13 official meat inspection authorities examined a number of 152 520 swine at an Austrian slaughterhouse for pathologic-anatomic changes (five parameters). Of those veterinarians whose reliability in the recording of findings was a given, the results were analysed by employing a mathematical model which assessed whether the activities of 25 attending veterinarians and 223 farmers actually lead to an improvement of animal health in their livestock. Mild pneumonia was registered in 14.5% of swine; no attending veterinarians had any influence whatsoever on the occurrence of this parameter. Farmers' activities improved animal health on two farms (0.9%), six farms of origin (2.69%) showed significantly lower findings than the average of all farms. Pleurisy was ascertained in 22% of all slaughter pigs. Through measures taken, four attending veterinarians (16%) caused a reduction of incidents, two works managers (0.9%) made worse, six farmers (2.69%) improved animal health of their live stock. Seven farmers (3.14%) showed significantly (p < 0.05) higher, 28 farms (12.6%) lower prevalence. Pericarditis affected 4.5% of the animals in question. On all farms of origin the condition of health remained unchanged by measures taken by veterinarians. On two farms (0.9%) the influence exercised by farmers led to a deterioration of the health of swine, six businesses (2.69%) showed higher, one (0.45%) lower prevalence than on average. 6.2% of swine showed white spots. Attending veterinarians did not influence this parameter at all. With preventive measures taken five farms (2.24%) showed less, three farms (1.35%) higher prevalence by the end of the 22 month term. Mange concerned 2.2% of all slaughter pigs. The activities of one veterinarian (4%) caused the number of incidents to double; on six farms (2.69%) a significantly higher prevalence was registered. Whatever influence exercised, the status of health of slaughter pigs remained unchanged throughout the duration of the study.


Subject(s)
Abattoirs/standards , Animals , Austria/epidemiology , Pericarditis/epidemiology , Pericarditis/veterinary , Pleurisy/epidemiology , Pleurisy/veterinary , Pneumonia/epidemiology , Pneumonia/veterinary , Prevalence , Swine , Swine Diseases/epidemiology
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