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1.
Neurosci Lett ; 500(3): 162-6, 2011 Aug 18.
Article in English | MEDLINE | ID: mdl-21683760

ABSTRACT

The gamma aminobutyric acid (GABA) system has been implicated in the susceptibility to develop alcohol dependence and in determining electroencephalogram (EEG) beta activity. The role of the GABA receptor alpha-2 gene (GABRA2) in human alcohol dependence was determined in a genetic and electrophysiological study. The study population comprised 586 white UK individuals with alcohol dependence but a very low prevalence of co-morbid drug dependence, and 603 ancestrally matched healthy controls. Genotyping for seven GABRA2 single nucleotide polymorphisms (SNPs), identified from the literature as positively associated with alcohol dependence, was performed with success rates of 90% or greater. EEGs were available in 32 selected patients who had been abstinent from alcohol for a minimum of 24 months and in 138 ancestrally matched healthy controls. None of the SNPs showed allelic or haplotypic association with alcohol dependence. All markers were in Hardy Weinberg equilibrium (HWE) in the controls. HWE for marker rs279841 in the alcohol dependent sample was p=0.0199 and combined p=0.0166. Linkage disequilibrium patterns appear to be very similar to that observed in the HapMap CEU data. A significantly higher prevalence of excess EEG fast activity was found in the patients (31 vs. 14%, p=0.018). A significant relationship was found between the presence of excess EEG fast activity and GABRA2 SNPs rs548583, rs279871 and rs279841. This allelic association study provides no evidence for an association between GABRA2 polymorphisms and alcohol dependence. However, a significant relationship was identified between GABRA2 and excess EEG fast activity. This dissociation of effect may reflect the fact that the EEG is a more direct marker of phenotypic GABRA2 expression than the more heterogeneous alcohol dependence phenotype.


Subject(s)
Alcoholism/genetics , Alcoholism/physiopathology , Polymorphism, Single Nucleotide , Receptors, GABA-A/genetics , Case-Control Studies , Electroencephalography , Female , Genetic Association Studies , Humans , Male
3.
Mol Psychiatry ; 15(6): 615-28, 2010 Jun.
Article in English | MEDLINE | ID: mdl-19048012

ABSTRACT

Markers at the pericentriolar material 1 gene (PCM1) have shown genetic association with schizophrenia in both a University College London (UCL) and a USA-based case-control sample. In this paper we report a statistically significant replication of the PCM1 association in a large Scottish case-control sample from Aberdeen. Resequencing of the genomic DNA from research volunteers who had inherited haplotypes associated with schizophrenia showed a threonine to isoleucine missense mutation in exon 24 which was likely to change the structure and function of PCM1 (rs370429). This mutation was found only as a heterozygote in 98 schizophrenic research subjects and controls out of 2246 case and control research subjects. Among the 98 carriers of rs370429, 67 were affected with schizophrenia. The same alleles and haplotypes were associated with schizophrenia in both the London and Aberdeen samples. Another potential aetiological base pair change in PCM1 was rs445422, which altered a splice site signal. A further mutation, rs208747, was shown by electrophoretic mobility shift assays to create or destroy a promoter transcription factor site. Five further non-synonymous changes in exons were also found. Genotyping of the new variants discovered in the UCL case-control sample strengthened the evidence for allelic and haplotypic association (P=0.02-0.0002). Given the number and identity of the haplotypes associated with schizophrenia, further aetiological base pair changes must exist within and around the PCM1 gene. PCM1 protein has been shown to interact directly with the disrupted-in-schizophrenia 1 (DISC1) protein, Bardet-Biedl syndrome 4, and Huntingtin-associated protein 1, and is important in neuronal cell growth. In a separate study we found that clozapine but not haloperidol downregulated PCM1 expression in the mouse brain. We hypothesize that mutant PCM1 may be responsible for causing a subtype of schizophrenia through abnormal cell division and abnormal regeneration in dividing cells in the central nervous system. This is supported by our previous finding of orbitofrontal volumetric deficits in PCM1-associated schizophrenia patients as opposed to temporal pole deficits in non-PCM1-associated schizophrenia patients. Caution needs to be exercised in interpreting the actual biological effects of the mutations we have found without further cell biology. However, the DNA changes we have found deserve widespread genotyping in multiple case-control populations.


Subject(s)
Autoantigens/genetics , Cell Cycle Proteins/genetics , Isoleucine/genetics , Mutation, Missense , Schizophrenia/genetics , Threonine/genetics , Alleles , England , Exons , Genetic Association Studies , Genotype , Haplotypes , Heterozygote , Humans , Scotland
4.
Mol Psychiatry ; 14(8): 774-85, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19349958

ABSTRACT

A genome scan meta-analysis (GSMA) was carried out on 32 independent genome-wide linkage scan analyses that included 3255 pedigrees with 7413 genotyped cases affected with schizophrenia (SCZ) or related disorders. The primary GSMA divided the autosomes into 120 bins, rank-ordered the bins within each study according to the most positive linkage result in each bin, summed these ranks (weighted for study size) for each bin across studies and determined the empirical probability of a given summed rank (P(SR)) by simulation. Suggestive evidence for linkage was observed in two single bins, on chromosomes 5q (142-168 Mb) and 2q (103-134 Mb). Genome-wide evidence for linkage was detected on chromosome 2q (119-152 Mb) when bin boundaries were shifted to the middle of the previous bins. The primary analysis met empirical criteria for 'aggregate' genome-wide significance, indicating that some or all of 10 bins are likely to contain loci linked to SCZ, including regions of chromosomes 1, 2q, 3q, 4q, 5q, 8p and 10q. In a secondary analysis of 22 studies of European-ancestry samples, suggestive evidence for linkage was observed on chromosome 8p (16-33 Mb). Although the newer genome-wide association methodology has greater power to detect weak associations to single common DNA sequence variants, linkage analysis can detect diverse genetic effects that segregate in families, including multiple rare variants within one locus or several weakly associated loci in the same region. Therefore, the regions supported by this meta-analysis deserve close attention in future studies.


Subject(s)
Chromosomes, Human/genetics , Genetic Linkage , Genetic Predisposition to Disease , Genome-Wide Association Study , Schizophrenia/genetics , Female , Genome, Human/genetics , Genome-Wide Association Study/methods , Humans , Lod Score , Male , Pedigree
5.
Mol Psychiatry ; 14(6): 614-20, 2009 Jun.
Article in English | MEDLINE | ID: mdl-18268501

ABSTRACT

Three linkage studies of bipolar disorder have implicated chromosome 12q24.3 with lod scores of over 3.0 and several other linkage studies have found lods between 2 and 3. Fine mapping within the original chromosomal linkage regions has identified several loci that show association with bipolar disorder. One of these is the P2RX7 gene encoding a central nervous system-expressed purinergic receptor. A non-synonymous single nucleotide polymorphism, rs2230912 (P2RX7-E13A, G allele) and a microsatellite marker NBG6 were both previously found to be associated with bipolar disorder (P=0.00071 and 0.008, respectively). rs2230912 has also been found to show association with unipolar depression. The effect of the polymorphism is non-conservative and results in a glutamine to arginine change (Gln460Arg), which is likely to affect P2RX7 dimerization and protein-protein interactions. We have confirmed the allelic associations between bipolar disorder and the markers rs2230912 (P2RX7-E13A, G allele, P=0.043) and NBG6 (P=0.010) in a London-based sample of 604 bipolar cases and 560 controls. When we combined these data with the published case-control studies of P2RX7 and mood disorder (3586 individuals) the association between rs2230912 (Gln460Arg) and affective disorders became more robust (P=0.002). The increase in Gln460Arg was confined to heterozygotes rather than homozygotes suggesting a dominant effect (odds ratio 1.302, CI=1.129-1.503). Although further research is needed to prove that the Gln460Arg change has an aetiological role, it is so far the most convincing mutation to have been found with a role for increasing susceptibility to bipolar and genetically related unipolar disorders.


Subject(s)
Amino Acid Substitution/genetics , Bipolar Disorder/genetics , Depressive Disorder/genetics , Linkage Disequilibrium , Receptors, Purinergic P2/genetics , Arginine/genetics , Case-Control Studies , Chromosomes, Human, Pair 12 , Gene Frequency , Genes, Dominant , Genetic Predisposition to Disease , Glutamine/genetics , Haplotypes , Heterozygote , Homozygote , Humans , Microsatellite Repeats , Receptors, Purinergic P2X7
6.
Mol Psychiatry ; 13(6): 558-69, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18317468

ABSTRACT

We performed a genome-wide association scan in 1461 patients with bipolar (BP) 1 disorder, 2008 controls drawn from the Systematic Treatment Enhancement Program for Bipolar Disorder and the University College London sample collections with successful genotyping for 372,193 single nucleotide polymorphisms (SNPs). Our strongest single SNP results are found in myosin5B (MYO5B; P=1.66 x 10(-7)) and tetraspanin-8 (TSPAN8; P=6.11 x 10(-7)). Haplotype analysis further supported single SNP results highlighting MYO5B, TSPAN8 and the epidermal growth factor receptor (MYO5B; P=2.04 x 10(-8), TSPAN8; P=7.57 x 10(-7) and EGFR; P=8.36 x 10(-8)). For replication, we genotyped 304 SNPs in family-based NIMH samples (n=409 trios) and University of Edinburgh case-control samples (n=365 cases, 351 controls) that did not provide independent replication after correction for multiple testing. A comparison of our strongest associations with the genome-wide scan of 1868 patients with BP disorder and 2938 controls who completed the scan as part of the Wellcome Trust Case-Control Consortium indicates concordant signals for SNPs within the voltage-dependent calcium channel, L-type, alpha 1C subunit (CACNA1C) gene. Given the heritability of BP disorder, the lack of agreement between studies emphasizes that susceptibility alleles are likely to be modest in effect size and require even larger samples for detection.


Subject(s)
Antigens, Neoplasm/genetics , Bipolar Disorder/genetics , ErbB Receptors/genetics , Genome, Human , Membrane Glycoproteins/genetics , Myosin Heavy Chains/genetics , Myosin Type V/genetics , Polymorphism, Single Nucleotide , Chromosome Mapping , DNA/genetics , DNA/isolation & purification , Gene Frequency , Genetic Markers , Genotype , Humans , Medical History Taking , Patient Selection , Reference Values , Tetraspanins
7.
Mol Psychiatry ; 11(2): 134-42, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16205735

ABSTRACT

Linkage analyses of bipolar families have confirmed that there is a susceptibility locus near the telomere on chromosome 21q. To fine map this locus we carried out tests of allelic association using 30 genetic markers near the telomere at 21q22.3 in 600 bipolar research subjects and 450 ancestrally matched supernormal control subjects. We found significant allelic association with the microsatellite markers D21S171 (P=0.016) and two closely linked single-nucleotide polymorphisms, rs1556314 (P=0.008) and rs1785467 (P=0.025). A test of association with a three locus haplotype across the susceptibility region was significant with a permutation test of P=0.011. A two SNP haplotype was also significantly associated with bipolar disorder (P=0.01). Only two brain expressed genes, TRPM2 and C21ORF29 (TSPEAR), are present in the associated region. TRPM2 encodes a calcium channel receptor and TSPEAR encodes a peptide with repeats associated with epilepsy in the mouse. DNA from subjects who had inherited the associated marker alleles was sequenced. A base pair change (rs1556314) in exon 11 of TRPM2, which caused a change from an aspartic acid to a glutamic acid at peptide position 543 was found. This SNP showed the strongest association with bipolar disorder (P=0.008). Deletion of exon 11 of TRPM2 is known to cause dysregulation of cellular calcium homeostasis in response to oxidative stress. A second nonconservative change from arginine to cysteine at position 755 in TRPM2 (ss48297761) was also detected. A third nonconservative change from histidine to glutamic acid was found in exon 8 of TSPEAR. These changes need further investigation to establish any aetiological role in bipolar disorder.


Subject(s)
Bipolar Disorder/genetics , Chromosome Mapping , Chromosomes, Human, Pair 21/genetics , Genetic Predisposition to Disease/genetics , Mood Disorders/genetics , TRPM Cation Channels/genetics , Amino Acid Substitution , Case-Control Studies , Haplotypes , Humans , Linkage Disequilibrium , Microsatellite Repeats/genetics , Pedigree , Polymorphism, Genetic
8.
Psychiatr Genet ; 14(2): 83-7, 2004 Jun.
Article in English | MEDLINE | ID: mdl-15167693

ABSTRACT

OBJECTIVES: To localize genes influencing the susceptibility to Gilles de la Tourette syndrome (GTS) and associated chronic multiple tics (CMT). METHOD: A single, large, multiple affected pedigree containing 35 subjects diagnosed with GTS and a further 14 with CMT was genotyped for markers spanning the autosomes. Linkage analysis was carried out using classical lod score analysis and model-free lod score analysis. All markers were subjected to two-point analysis, and markers producing a two-point result significant at P<0.005 were subjected to three-point analysis using adjacent markers. RESULTS: The following markers produced at least one result significant at 0.005 using two-point analysis: D5S1981, D5S2050, D10S591, D10S189, D13S217, and D14S288. Three-point analysis with D5S2050 and D5S400 produced a lod of 2.9 with CMT. Three-point analysis of D10S591 and D10S189 produced lods of 1.9 with GTS and CMT. Three-point analysis of D13S217 and D13S171 produced a lod of 2.7 with GTS. No single haplotype appeared to account for the majority of cases within the pedigree. CONCLUSIONS: It seems likely that more than one susceptibility allele is present in the pedigree. Although none of the three positive regions is conclusively implicated, it seems probable that at least one contains a susceptibility locus. We recommend that association-based studies be carried out in these three regions to produce further evidence for a localization and to carry out fine-mapping.


Subject(s)
Chromosomes, Human, Pair 10/genetics , Chromosomes, Human, Pair 13/genetics , Chromosomes, Human, Pair 5/genetics , Genome, Human , Tourette Syndrome/genetics , Chromosome Mapping , Female , Genetic Markers , Humans , Male , Pedigree
9.
Ann Hum Genet ; 66(Pt 3): 235-44, 2002 May.
Article in English | MEDLINE | ID: mdl-12174214

ABSTRACT

It is important that case-control samples be drawn from a genetically homogeneous population in order to avoid artefactual false positive results and to enhance power to detect disease mutations and markers in linkage disequilibrium with them. Tests which simply compare overall marker allele frequencies between cases and controls will fail to identify a relatively small number of subjects drawn from a different genetic background who could usefully be discarded from the sample. Such subjects can be identified using multilocus tests, but previously described tests have been unnecessarily complex and cumbersome for this simple application. We describe a straightforward test, implemented in the CHECKHET program, which uses a measure of genetic difference and permutation procedures to rapidly identify such subjects using genotypes from multiple unlinked markers. It seems to perform reasonably well on simulated data, and with real data appears to identify two abnormal subjects within a case-control sample. We recommend that such tests be routinely applied to case-control samples once sufficient numbers of markers have been genotyped within them.


Subject(s)
Case-Control Studies , Likelihood Functions , Research Design , Genetic Predisposition to Disease , Genetic Variation , Humans , Sampling Studies
10.
Psychiatr Genet ; 11(3): 173-6, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11702062

ABSTRACT

We have attempted to replicate the findings of Brunner et al., who described a large Dutch kindred where several males were of borderline intelligence and showed characteristically aggressive and sometimes dangerous or extremely antisocial behaviour. The genetic defect for this syndrome was assigned to the p11-p21 region of the X chromosome following linkage analysis in a single kindred. Subsequent sequencing of a candidate gene, monoamine oxidase A (MAO-A), at the position of maximum linkage revealed a causative mutation in the coding region of the MAO-A gene in position 936. In addition to identifying both the phenotype and the associated mutation found by Brunner et al., we also wished to test the hypothesis that mutations elsewhere in the MAO-A gene could cause the low intelligence quotient/personality disorder phenotype associated with low urinary catecholamine degradation products. Fifty-four male subjects similar in clinical characteristics to the affected males in the Dutch kindred were identified within secure mental health facilities in England and Wales. All were assessed using the antisocial personality disorder section of the SCID-II interview instrument, and information about their offending behaviour and family history was obtained from the medical notes. A blood and early-morning urine sample was obtained from each patient. Analysis of urinary excretion patterns of biogenic amines and their metabolites, represented as ratios of normetanefrine to vanillylmandelic acid, revealed two possible cases of MAO-A deficiency, which were found to be negative after resampling.


Subject(s)
Antisocial Personality Disorder/genetics , Learning Disabilities/genetics , Monoamine Oxidase/deficiency , X Chromosome , Antisocial Personality Disorder/enzymology , Antisocial Personality Disorder/urine , Chromosome Mapping , Circadian Rhythm , Genetic Linkage , Humans , Inpatients , Learning Disabilities/enzymology , Learning Disabilities/urine , Monoamine Oxidase/genetics , Mutation , Normetanephrine/urine , Reference Values , Vanilmandelic Acid/urine
11.
Eur J Hum Genet ; 9(6): 469-72, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11436130

ABSTRACT

Schizophrenia is a common, genetically heterogeneous disorder with a lifetime prevalence of approximately 1% in the general population. Linkage studies of affected families have now strongly implicated a susceptibility locus on chromosome 8p21-22. Tests of allelic association with markers on 8p21-22 should be able to localise any quantitative trait nucleotides (QTN's) or susceptibility mutations to within a few hundred kilobases. Three brain expressed candidate susceptibility genes, prepronociceptin (PNOC), neuronal cholinergic receptor, nicotinic, alpha polypeptide 2 (CHRNA2) and arylamine N-acetyltransferase 1 (NAT1) have been mapped to chromosome 8p21-22. A case-control, allelic association study was performed using a novel highly polymorphic dinucleotide repeat, D8S2611 near the PNOC gene, two previously characterised dinucleotide repeats, D8S131 and D8S131P at the CHRNA2 locus and an RFLP at the 3'UTR of the arylamine N-acetyltransferase 1 (NAT1) gene. No differences were found in allele frequencies between the patient and control groups. DNA variations or mutations at or near the three genes under study are unlikely to increase susceptibility to schizophrenia in our population sample.


Subject(s)
Arylamine N-Acetyltransferase/genetics , Chromosomes, Human, Pair 8 , Protein Precursors/genetics , Receptors, Nicotinic/genetics , Receptors, Opioid/genetics , Schizophrenia/genetics , 3' Untranslated Regions , Alleles , Case-Control Studies , Genotype , Humans , Mutation , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Quantitative Trait, Heritable , Repetitive Sequences, Nucleic Acid
12.
Gene Ther ; 8(6): 453-60, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11313824

ABSTRACT

Promising advances in nonviral gene transfer have been made as a result of the production of cationic liposomes formulated with synthetic cationic lipids (cytofectins) that are able to transfect cells. However few cationic liposome systems have been examined for their ability to transfect CNS cells. Building upon our earlier use of cationic liposomes formulated from 3beta-[N-(N',N'-dimethylaminoethane)carbamoyl] cholesterol (DC-Chol) and dioleoyl-L-alpha-phosphatidyl-ethanolamine (DOPE), we describe studies using two cationic viral peptides, mu (mu) and Vp1, as potential enhancers for cationic liposome-mediated transfection. Mu is derived from the condensed core of the adenovirus and was selected to be a powerful nucleic acid charge neutralising and condensing agent. Vp1 derives from the polyomavirus and harbours a classical nuclear localisation signal (NLS). Vp1 proved disappointing but lipopolyplex mixtures formulated from pCMVbeta plasmid, mu peptide and DC-Chol/DOPE cationic liposomes were able to transfect an undifferentiated neuronal ND7 cell line with beta-galactosidase reporter gene five-fold more effectively than lipoplex mixtures prepared from pCMVbeta plasmid and DC-Chol/DOPE cationic liposomes. Mu was found to give an identical enhancement to cationic liposome-mediated transfection of ND7 cells as poly-L-lysine (pLL) or protamine sulfate (PA). The enhancing effects of mu were found to be even greater (six- to 10-fold) when differentiated ND7 cells were transfected with mu-containing lipopolyplex mixtures. Differentiated ND7 cells represent a simple ex vivo-like post-mitotic CNS cell system. Successful transfection of these cells bodes well for transfection of primary neurons and CNS cells in vivo. These findings have implications for experimental and therapeutic uses of cationic liposome-mediated delivery of nucleic acids to CNS cells.


Subject(s)
Central Nervous System/cytology , DNA-Binding Proteins/genetics , Genetic Therapy/methods , Transfection/methods , Viral Proteins/genetics , beta-Galactosidase/genetics , Animals , Cell Line , Cholesterol/analogs & derivatives , Liposomes , Phosphatidylethanolamines , Polylysine , Protamines , Rats
13.
Am J Hum Genet ; 68(3): 661-73, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11179014

ABSTRACT

We have performed genetic linkage analysis in 13 large multiply affected families, to test the hypothesis that there is extensive heterogeneity of linkage for genetic subtypes of schizophrenia. Our strategy consisted of selecting 13 kindreds containing multiple affected cases in three or more generations, an absence of bipolar affective disorder, and a single progenitor source of schizophrenia with unilineal transmission into the branch of the kindred sampled. DNA samples from these families were genotyped with 365 microsatellite markers spaced at approximately 10-cM intervals across the whole genome. We observed LOD scores >3.0 at five distinct loci, either in the sample as a whole or within single families, strongly suggesting etiological heterogeneity. Heterogeneity LOD scores >3.0 in the sample as a whole were found at 1q33.2 (LOD score 3.2; P=.0003), 5q33.2 (LOD score 3.6; P=.0001), 8p22.1-22 (LOD score 3.6; P=.0001), and 11q21 (LOD score 3.1; P=.0004). LOD scores >3.0 within single pedigrees were found at 4q13-31 (LOD score 3.2; P=.0003) and at 11q23.3-24 (LOD score 3.2; P=.0003). A LOD score of 2.9 was also found at 20q12.1-11.23 within in a single family. The fact that other studies have also detected LOD scores >3.0 at 1q33.2, 5q33.2, 8p21-22 and 11q21 suggests that these regions do indeed harbor schizophrenia-susceptibility loci. We believe that the weight of evidence for linkage to the chromosome 1q22, 5q33.2, and 8p21-22 loci is now sufficient to justify intensive investigation of these regions by methods based on linkage disequilibrium. Such studies will soon allow the identification of mutations having a direct effect on susceptibility to schizophrenia.


Subject(s)
Chromosomes, Human, Pair 11 , Chromosomes, Human, Pair 1 , Chromosomes, Human, Pair 20 , Chromosomes, Human, Pair 5 , Chromosomes, Human, Pair 8 , Genetic Predisposition to Disease/genetics , Genome, Human , Schizophrenia/genetics , Chromosome Aberrations , Chromosome Mapping , Family , Female , Genetic Linkage , Genetic Markers , Genotype , Humans , Lod Score , Male , Microsatellite Repeats , Pedigree
14.
Am J Hum Genet ; 67(2): 510-4, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10889047

ABSTRACT

The results of genetic linkage studies for autism have suggested that a susceptibility locus for the disease is located on the long arm of chromosome 7 (7q). An autistic individual carrying a translocation, t(7;13)(q31.3;q21), with the chromosome 7 breakpoint located in the region of 7q implicated by genetic studies was identified. A novel gene known as "RAY1" (or "FAM4A1") was found to be directly interrupted by the translocation breakpoint. The gene, which was found to be encoded by 16 exons with evidence of alternative splicing, spanned > or =220 kb of DNA at 7q31.3. Mutation screening of the entire coding region in a set of 27 unrelated autistic individuals failed to identify phenotype-specific variants, suggesting that coding region mutations are unlikely to be involved in the etiology of autism. Apparent homologues of RAY1 have also been identified in mouse, rat, pig, chicken, fruit fly, and nematode. The human and mouse genes share similar splicing patterns, and their predicted protein products are 98% identical.


Subject(s)
Autistic Disorder/genetics , Chromosome Breakage/genetics , Chromosomes, Human, Pair 7/genetics , Genetic Linkage/genetics , Proteins/genetics , Translocation, Genetic/genetics , Tumor Suppressor Proteins , Alternative Splicing/genetics , Amino Acid Sequence , Animals , Child , Chromosome Mapping , Cloning, Molecular , DNA Mutational Analysis , Exons/genetics , Female , Gene Expression Profiling , Genetic Predisposition to Disease/genetics , Humans , Male , Molecular Sequence Data , Mutation/genetics , Phenotype , Polymorphism, Genetic/genetics , Proteins/chemistry , RNA, Messenger/analysis , RNA, Messenger/genetics , Sequence Alignment
15.
Am J Hum Genet ; 66(3): 819-29, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10712198

ABSTRACT

Larger CAG/CTG trinucleotide-repeat tracts in individuals affected with schizophrenia (SCZ) and bipolar affective disorder (BPAD) in comparison with control individuals have previously been reported, implying a possible etiological role for trinucleotide repeats in these diseases. Two unstable CAG/CTG repeats, SEF2-1B and ERDA1, have recently been cloned, and studies indicate that the majority of individuals with large repeats as detected by repeat-expansion detection (RED) have large repeat alleles at these loci. These repeats do not show association of large alleles with either BPAD or SCZ. Using RED, we have identified a BPAD individual with a very large CAG/CTG repeat that is not due to expansion at SEF2-1B or ERDA1. From this individual's DNA, we have cloned a highly polymorphic trinucleotide repeat consisting of (CTA)n (CTG)n, which is very long ( approximately 1,800 bp) in this patient. The repeat region localizes to chromosome 13q21, within 1.2 cM of fragile site FRA13C. Repeat alleles in our sample were unstable in 13 (5.6%) of 231 meioses. Large alleles (>100 repeats) were observed in 14 (1. 25%) of 1,120 patients with psychosis, borderline personality disorder, or juvenile-onset depression and in 5 (.7%) of 710 healthy controls. Very large alleles were also detected for Centre d'Etude Polymorphisme Humaine (CEPH) reference family 1334. This triplet expansion has recently been reported to be the cause of spinocerebellar ataxia type 8 (SCA8); however, none of our large alleles above the disease threshold occurred in individuals either affected by SCA or with known family history of SCA. The high frequency of large alleles at this locus is inconsistent with the much rarer occurrence of SCA8. Thus, it seems unlikely that expansion alone causes SCA8; other genetic mechanisms may be necessary to explain SCA8 etiology.


Subject(s)
Chromosomes, Human, Pair 13/genetics , Gene Frequency/genetics , Genetic Linkage/genetics , Spinocerebellar Ataxias/genetics , Trinucleotide Repeat Expansion/genetics , Adult , Bipolar Disorder/genetics , Borderline Personality Disorder/genetics , Christianity , Cloning, Molecular , Depressive Disorder/genetics , Female , Genetic Testing , Humans , Male , Matched-Pair Analysis , Microsatellite Repeats/genetics , Molecular Sequence Data , Pedigree , Polymorphism, Genetic/genetics , RNA, Messenger/analysis , RNA, Messenger/genetics , Reproducibility of Results , Schizophrenia/genetics
16.
Gene Ther ; 6(2): 190-7, 1999 Feb.
Article in English | MEDLINE | ID: mdl-10435103

ABSTRACT

We have examined the potential of cationic liposomes as a tool for approaches to gene therapy in the CNS. Our previous work has shown that cationic liposomes formulated from 3 beta-[N-(N',N'-dimethylaminoethane)carbamoyl] cholesterol (DC-Chol) and dioleoyl-L-alpha-phosphatidylethanolamine (DOPE) could achieve high transfection levels in a neuronal cell line (McQuillin et al. Neuroreport 1997; 8: 1481-1484). We therefore wished to assess transfection efficiencies in organotypic cultures from the brain with a reporter plasmid expressing E. coli beta-galactosidase in order to mimic an in vivo model. Explant cultures were generated according to the method of Stoppini et al (J Neurosci Meth 1991; 37: 173-182) with slight modifications. Brain slices were maintained on transparent porous membranes and were observed to maintain their intrinsic connectivity and cytoarchitecture to a large degree over periods of up to 6 weeks in culture. CNS tissue was obtained from rats at birth or 5 days after birth. After transfection beta-galactosidase expression was detected in cells of both neuronal and non-neuronal morphology. Control cultures were exposed to liposome alone and a plasmid that had the beta-galactosidase gene insert removed. Only low levels of endogenous beta-galactosidase reactivity were seen in these control cultures. DC-Chol/DOPE-mediated transfection was confirmed using a RT-PCR protocol capable of differentiating between untranscribed plasmid DNA and RNA generated from the transfected vector. These results suggest that cationic liposomes, particularly DC-Chol/DOPE liposomes, will be useful as delivery agents for gene transfer to CNS cells in vitro and possibly in vivo.


Subject(s)
Central Nervous System Diseases/therapy , Genetic Therapy/methods , Mesencephalon , Transfection/methods , Animals , Cholesterol/analogs & derivatives , Culture Techniques , Gene Expression , Liposomes , Phosphatidylethanolamines , Rats , Rats, Sprague-Dawley , Reverse Transcriptase Polymerase Chain Reaction , beta-Galactosidase/genetics
17.
Brain Res Mol Brain Res ; 68(1-2): 14-21, 1999 May 07.
Article in English | MEDLINE | ID: mdl-10320779

ABSTRACT

Glutamate receptor function has been hypothesized as an important factor in both the aetiology and treatment of schizophrenia. We have used a multiprobe oligonucleotide solution hybridization (MOSH) technique to examine the regulation of gene expression of the GluR1-7, KA1, and KA2 glutamate receptor subunits in the left rat brain following treatment with the optical isomers of flupenthixol at a dose of 0.2 mg kg-1 day-1 over a period of 4, 12, 24 weeks in order to understand how specific glutamate receptor genes are involved in the treatment of schizophrenia. The GluR2/3 and GluR6/7 subunit immunoreactivity in the right brain following 4 and 24 weeks of drug treatment was also examined by Western blotting. Neither trans- nor cis-flupenthixol was found to alter the gene expression of any of the 9 non-NMDA glutamate receptor subunits. On the other hand, we found a nearly two-fold increase in gene expression of the D2 dopamine receptor in specific brain regions. These results suggest that non-NMDA types of glutamate receptor subunits, in contrast to NMDA receptors, are less likely to have a role in the action of antipsychotic drugs.


Subject(s)
Antipsychotic Agents/pharmacology , Brain/drug effects , Dopamine Antagonists/pharmacology , Gene Expression Regulation/drug effects , Receptors, Dopamine D2/genetics , Receptors, Glutamate/genetics , Amino Acid Sequence , Animals , Brain/metabolism , Flupenthixol/pharmacology , Male , Molecular Sequence Data , Rats , Rats, Sprague-Dawley , Receptors, AMPA/genetics , Receptors, Kainic Acid/genetics , Stereoisomerism , Time Factors
18.
Am J Psychiatry ; 156(1): 136-8, 1999 Jan.
Article in English | MEDLINE | ID: mdl-9892311

ABSTRACT

OBJECTIVE: This study examined the putative role of serotonin genes in the etiology of bipolar affective disorder. METHOD: Genetic association analysis was performed for individuals with bipolar affective disorder and unaffected subjects closely matched in age, sex, and ethnic background (N=103 in each group). The allele and genotype frequencies of polymorphisms at the genes for serotonin receptors HTR1A, HTR1Dalpha, HTR1Dbeta, HTR2A, HTR2C, HTR7, tryptophan hydroxylase (TPH), and the serotonin transporter (hSERT) were compared in the two groups of subjects. RESULTS: Statistically significant positive associations were found for HTR2A and hSERT polymorphisms. However, results from an independent replication group of over 100 patients with bipolar affective disorder and their matched comparison subjects failed to confirm these associations. CONCLUSIONS: These results suggest that the serotonin genes studied are not associated with bipolar affective disorder, although transmission disequilibrium studies are required in order to confirm this conclusion.


Subject(s)
Bipolar Disorder/genetics , Membrane Transport Proteins , Nerve Tissue Proteins , Serotonin/genetics , Adult , Alleles , Bipolar Disorder/enzymology , Carrier Proteins/genetics , Female , Gene Frequency , Genotype , Haplotypes , Humans , Male , Membrane Glycoproteins/genetics , Odds Ratio , Polymorphism, Genetic , Receptors, Serotonin/genetics , Reproducibility of Results , Serotonin Plasma Membrane Transport Proteins , Tryptophan Hydroxylase/genetics
19.
Psychiatr Genet ; 9(4): 197-9, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10697827

ABSTRACT

There have been claims that a gene on the X chromosome may contribute to susceptibility to schizophrenia. Crow (1988) initially proposed that such a gene might lie in the pseudoautosomal region, but when evidence that weakened this hypothesis accumulated, he proposed that a susceptibility locus might be present elsewhere on the sex chromosomes instead. DeLisi et al. (1994) found a small nonsignificant positive lod score between the marker DXS7 and schizophrenia, but other failed to replicate this finding. Another study reported by Crow and DeLisi's group was also weakly positive for this marker (Dann et al., 1997). This locus was then investigated in a collaborative study by Laval et al. (1997), which produced a nonparametric lod score of 2.44. Using a sample of 17 pedigrees from Britain and Iceland, we have also tested the hypothesis of linkage between DXS7 and schizophrenia. The 17 families were selected from a larger sample on the basis of an absence of male-to-male transmission for schizophrenia. These families were originally selected for having multiple cases of schizophrenia within them and for having no cases of bipolar affective disorder. We genotyped subjects for a marker at DXS7 and performed classical lod score and model-free linkage analysis using broad and narrow definitions of affection with schizophrenia. We found strongly negative lod scores and no evidence for linkage using model-free analysis. Therefore, this study does not support the hypothesis of linkage of schizophrenia to DXS7, and the evidence for a susceptibility locus on this part of the X chromosome is weakened.


Subject(s)
Chromosomes, Human, Pair 11 , Genetic Linkage , Schizophrenia/genetics , Chromosome Mapping , Female , Genetic Markers , Humans , Iceland , Lod Score , Male , Pedigree , Statistics, Nonparametric , United Kingdom
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