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1.
Plants (Basel) ; 13(9)2024 Apr 29.
Article in English | MEDLINE | ID: mdl-38732454

ABSTRACT

The best-characterized functional motifs of the potyviral Helper-Component protease (HC-Pro) responding for aphid transmission, RNA silencing suppression, movement, symptom development, and replication are gathered in this review. The potential cellular protein targets of plant virus proteases remain largely unknown despite their multifunctionality. The HC-Pro catalytic domain, as a cysteine protease, autoproteolytically cleaves the potyviral polyproteins in the sequence motif YXVG/G and is not expected to act on host targets; however, 146 plant proteins in the Viridiplantae clade containing this motif were searched in the UniProtKB database and are discussed. On the other hand, more than 20 interactions within the entire HC-Pro structure are known. Most of these interactions with host targets (such as the 20S proteasome, methyltransferase, transcription factor eIF4E, and microtubule-associated protein HIP2) modulate the cellular environments for the benefit of virus accumulation or contribute to symptom severity (interactions with MinD, Rubisco, ferredoxin) or participate in the suppression of RNA silencing (host protein VARICOSE, calmodulin-like protein). On the contrary, the interaction of HC-Pro with triacylglycerol lipase, calreticulin, and violaxanthin deepoxidase seems to be beneficial for the host plant. The strength of these interactions between HC-Pro and the corresponding host protein vary with the plant species. Therefore, these interactions may explain the species-specific sensitivity to potyviruses.

2.
Methods Mol Biol ; 2787: 245-253, 2024.
Article in English | MEDLINE | ID: mdl-38656494

ABSTRACT

To properly assess promoter activity, which is critical for understanding biosynthetic pathways in different plant species, we use agroinfiltration-based transient gene expression assay. We compare the activity of several known promoters in Nicotiana benthamiana with their activity in Cannabis sativa (both hemp and medicinal cannabis), which has attracted much attention in recent years for its industrial, medicinal, and recreational properties. Here we describe an optimized protocol for transient expression in Cannabis combined with a ratiometric GUS reporter system that allows more accurate evaluation of promoter activity and reduces the effects of variable infiltration efficiency.


Subject(s)
Cannabis , Gene Expression Regulation, Plant , Nicotiana , Plants, Genetically Modified , Promoter Regions, Genetic , Cannabis/genetics , Cannabis/metabolism , Nicotiana/genetics , Nicotiana/metabolism , Plants, Genetically Modified/genetics , Genes, Reporter , Gene Expression/genetics , Glucuronidase/genetics , Glucuronidase/metabolism
3.
Viruses ; 14(2)2022 01 31.
Article in English | MEDLINE | ID: mdl-35215892

ABSTRACT

Reverse transcription PCR (RT-PCR) is a popular method for detecting RNA viruses in plants. RT-PCR is usually performed in a classical two-step procedure: in the first step, cDNA is synthesized by reverse transcriptase (RT), followed by PCR amplification by a thermostable polymerase in a separate tube in the second step. However, one-step kits containing multiple enzymes optimized for RT and PCR amplification in a single tube can also be used. Here, we describe an RT-PCR single-enzyme assay based on an RTX DNA polymerase that has both RT and polymerase activities. The expression plasmid pET_RTX_(exo-) was transferred to various E. coli genotypes that either compensated for codon bias (Rosetta-gami 2) or contained additional chaperones to promote solubility (BL21 (DE3) with plasmids pKJE8 or pTf2). The RTX enzyme was then purified and used for the RT-PCR assay. Several purified plant viruses (TMV, PVX, and PVY) were used to determine the efficiency of the assay compared to a commercial one-step RT-PCR kit. The RT-PCR assay with the RTX enzyme was validated for the detection of viruses from different genera using both total RNA and crude sap from infected plants. The detection endpoint of RTX-PCR for purified TMV was estimated to be approximately 0.01 pg of the whole virus per 25 µL reaction, corresponding to 6 virus particles/µL. Interestingly, the endpoint for detection of TMV from crude sap was also 0.01 pg per reaction in simulated crude plant extracts. The longest RNA fragment that could be amplified in a one-tube arrangement was 2379 bp long. The longest DNA fragment that could be amplified during a 10s extension was 6899 bp long. In total, we were able to detect 13 viruses from 11 genera using RTX-PCR. For each virus, two to three specific fragments were amplified. The RT-PCR assay using the RTX enzyme described here is a very robust, inexpensive, rapid, easy to perform, and sensitive single-enzyme assay for the detection of plant viruses.


Subject(s)
Plant Diseases/virology , Plant Viruses/isolation & purification , Polymerase Chain Reaction/methods , RNA Viruses/isolation & purification , Crops, Agricultural/virology , DNA-Directed DNA Polymerase/metabolism , Phylogeny , Plant Viruses/classification , Plant Viruses/genetics , Polymerase Chain Reaction/instrumentation , RNA Viruses/classification , RNA Viruses/genetics , Sensitivity and Specificity
4.
Protein Expr Purif ; 85(1): 152-7, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22850536

ABSTRACT

The Human papillomavirus 16 (HPV16) E7 oncoprotein is a promising candidate for development of anti-cancer therapeutic vaccine. We have prepared the expression construct carrying mutagenized E7 oncoprotein fused to the C-terminus of Tobacco mosaic virus (TMV) coat protein via 15 amino acids ß-sheet linker. The fusion protein was expressed in Escherichia coli MC 1061 cells. We have obtained high level expression, but most of the protein remained in insoluble inclusion bodies. To increase the ratio of soluble protein various molecular chaperones (TF, DnaK-DnaJ-GrpE, GroEL-GroES) were used. The immunological reactivity of expressed recombinant protein was evaluated with anti-E7 and anti-TMV antibodies. The distribution of expressed product during ultracentrifugation on sucrose gradient was studied.


Subject(s)
Capsid Proteins/genetics , Escherichia coli/genetics , Human papillomavirus 16/genetics , Papillomavirus E7 Proteins/genetics , Recombinant Fusion Proteins/genetics , Tobacco Mosaic Virus/genetics , Animals , Antibodies/immunology , Capsid Proteins/chemistry , Capsid Proteins/immunology , Cloning, Molecular/methods , Electrophoresis, Polyacrylamide Gel , Gene Expression , Human papillomavirus 16/chemistry , Human papillomavirus 16/immunology , Humans , Mice , Molecular Chaperones/chemistry , Molecular Chaperones/genetics , Mutagenesis , Papillomavirus E7 Proteins/chemistry , Papillomavirus E7 Proteins/immunology , Papillomavirus Infections/virology , Rabbits , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/immunology , Solubility , Tobacco Mosaic Virus/chemistry , Tobacco Mosaic Virus/immunology
5.
J Biosci ; 37(1): 125-33, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22357210

ABSTRACT

Transient expression of foreign genes based on plant viral vectors is a suitable system for the production of relevant immunogens that can be used for the development of a new generation of vaccines against a variety of infectious diseases. In the present study the epitope derived from HPV-16 L2 minor capsid protein (amino acids 108-120) was expressed from Potato virus X (PVX)-based vector pGR106 as N- or C-terminal fusion with the PVX coat protein (PVX CP) in transgenic Nicotiana benthamiana plants. The fusion protein L2 108-120-PVX CP was successfully expressed in plants at a level of 170 mg/kg of fresh leaf tissue. The C-terminal fusion protein PVX CP- L2 108-120 was expressed using mutated vector sequence to avoid homologous recombination at a level of 8 mg/kg of fresh leaf tissue. Immunogenicity of L2 108-120-PVX CP virus-like particles was tested after immunization of mice by subcutaneous injection or tattoo administration. In animal sera the antibodies against the PVX CP and the L2 108-120 epitope were found after both methods of vaccine delivery.


Subject(s)
Capsid Proteins/metabolism , Nicotiana/metabolism , Oncogene Proteins, Viral/metabolism , Recombinant Fusion Proteins/immunology , Virion/immunology , Animals , Antibodies, Viral/blood , Blotting, Western , Cloning, Molecular , Electrophoresis, Polyacrylamide Gel , Enzyme-Linked Immunosorbent Assay , Epitopes/genetics , Epitopes/metabolism , Female , Genetic Vectors/genetics , Humans , Immunization , Mice , Mice, Inbred C57BL , Microscopy, Electron, Transmission , Oligonucleotides/genetics , Plant Leaves/metabolism , Plants, Genetically Modified , Recombinant Fusion Proteins/metabolism
6.
Protein Expr Purif ; 77(2): 146-52, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21266198

ABSTRACT

The E7 oncoprotein from Human papillomavirus type 16 (HPV16) is an attractive candidate for anti-cancer therapeutical vaccine development. In this study, we engineered different fusions of mutagenized coding sequence of E7 oncoprotein (E7ggg) with coat protein of Potato virus X (PVX CP) both on 5'- and 3'-terminus of PVX CP and evaluated the influence of the length of linker (no linker, 4, 15aa) connecting PVX CP and E7ggg on their production. At first the expression in Escherichia coli was conducted to assess the characteristics of the recombinant protein prior to be further produced in plants, that is, resultant proteins were used for screening of their immunological reactivity with antibodies against PVX CP and E7. Fusion proteins successfully expressed in bacteria and plants were partially purified and their reactivity and ability to form virus-like particles were evaluated with anti-E7 antibodies.


Subject(s)
Capsid Proteins/genetics , Papillomavirus E7 Proteins/genetics , Papillomavirus Vaccines/genetics , Recombinant Fusion Proteins/genetics , Vaccines, Virus-Like Particle/genetics , 3' Flanking Region , 5' Flanking Region , Agrobacterium tumefaciens , Antibodies/immunology , Capsid Proteins/immunology , Capsid Proteins/metabolism , Cloning, Molecular , Escherichia coli , Female , Gene Expression , Human papillomavirus 16/genetics , Human papillomavirus 16/immunology , Human papillomavirus 16/metabolism , Humans , Papillomavirus E7 Proteins/immunology , Papillomavirus E7 Proteins/metabolism , Papillomavirus Infections/immunology , Papillomavirus Infections/virology , Papillomavirus Vaccines/chemistry , Potexvirus/genetics , Potexvirus/immunology , Potexvirus/metabolism , Protein Engineering/methods , Recombinant Fusion Proteins/immunology , Recombinant Fusion Proteins/metabolism , Nicotiana , Uterine Cervical Neoplasms/immunology , Uterine Cervical Neoplasms/virology , Vaccines, Virus-Like Particle/chemistry
7.
Protein Expr Purif ; 58(1): 154-61, 2008 Mar.
Article in English | MEDLINE | ID: mdl-17980618

ABSTRACT

The optimized expression of recombinant Potato virus A coat protein (ACP) carrying two different epitopes from Human papillomavirus type 16 (HPV16) was developed. Epitope derived from minor capsid protein L2 was expressed as N-terminal fusion with ACP while an epitope derived from E7 oncoprotein was fused to its C-terminus. The construct was cloned into Potato X potexvirus (PVX) based vector and transiently expressed in plants using Agrobacterium tumefaciens mediated inoculation. To increase the level of expressed protein the transgenic Nicotiana benthamiana plants expressing Potato virus A HC-Pro gene and transgenic Nicotiana tabacum, cv. Petit Havana SR1 carrying Potato virus A P3 protein gene were tested. Synergistic infection of host plants with PVX carrying the construct and Potato virus Y(O) (PVY(O)) increased the expression of L2ACPE7 in N. tabacum and in transgenic N. benthamiana carrying potyviral HC-Pro gene as compared to control plants infected with L2ACPE7 only.


Subject(s)
Capsid Proteins/genetics , Genetic Vectors , Oncogene Proteins, Viral/genetics , Peptide Fragments/genetics , Potexvirus/genetics , Capsid Proteins/metabolism , Humans , Microscopy, Immunoelectron , Oncogene Proteins, Viral/metabolism , Papillomavirus E7 Proteins , Peptide Fragments/isolation & purification , Peptide Fragments/metabolism , Plants, Genetically Modified , Potexvirus/physiology , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/isolation & purification
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