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1.
Clin Transl Oncol ; 20(9): 1109-1116, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29536331

ABSTRACT

Circular RNAs (CircRNAs) are a type of non-coding RNAs (NcRNAs) with a closed annular structure. Until next-generation sequencing (NGS) is developed, the misunderstanding of circRNAs 'splicing error' has changed, and the mysterious veil of circRNAs has been revealed. NGS provides an approach to investigate circRNAs. Many scholars point out that circRNAs may play an important role in many diseases, especially cancer. At the same time, exosomes, as a kind of extracellular vesicles loaded with many contents, are a hotspot in recent years. They can act as 'messengers' between cells, especially in cancer. Lately, it is interesting circRNAs are enriched and stable in exosomes, also called exo-circRNAs, and there have been several articles on circRNAs associated with exosomes. In this review, we summarize the characteristics of circRNAs, especially its main functions. Then, we briefly introduce exosomes and their function in cancer. Finally, the known relation between circRNAs and exosomes is discussed. With further researches, exo-circRNAs may be a novel pathway for cancer diagnosis and targeted therapy.


Subject(s)
Exosomes/physiology , Neoplasms/genetics , RNA/physiology , Humans , Immune System/physiology , MicroRNAs/physiology , Neoplasm Metastasis , RNA, Circular
2.
Genet Mol Res ; 14(4): 12537-46, 2015 Oct 16.
Article in English | MEDLINE | ID: mdl-26505404

ABSTRACT

To understand the effects of disease-resistant maize varieties and new cropping systems on the population of Curvularia lunata, 52 isolates of C. lunata were collected in China from 2011 to 2013. The isolates were analyzed in terms of phylogenetic relationships, morphology, and pathogenicity. Phylogenetic analysis showed that the 52 isolates clustered into 2 distinct clusters with further subdivisions, suggesting the emergence of new genetic divergence within C. lunata. Results of morphology and pathogenicity analyses demonstrated that there were significant differences among these isolates: 27 isolates were classified as fast growing, 5 as slow growing, and 20 as moderate growing. Three isolates had white-colored colonies, 13 had yellowish green-colored colonies, and the remaining isolates had dark green-colored colonies. Furthermore, conidiation rates were assessed: 30 isolates were characterized as having low conidiation rates, 15 as having medium conidiation rates, and the remaining 7 isolates as having high conidiation rates. Eleven of the isolates appeared to be strongly pathogenic against maize, 15 isolates proved to be weakly pathogenic against maize, and the remaining isolates were regarded to be moderately pathogenic. Interestingly, correlation analysis demonstrated a negative correlation between the growth rate and the pathogenicity of the isolates, while a positive correlation was observed between the conidiation rate and the pathogenicity. No correlation was observed between the colony color and the pathogenicity of the isolates.


Subject(s)
Ascomycota/genetics , Ascomycota/pathogenicity , Plant Diseases/microbiology , Zea mays/microbiology , China , Phylogeny , Virulence
3.
Genet Mol Res ; 14(3): 7548-55, 2015 Jul 06.
Article in English | MEDLINE | ID: mdl-26214433

ABSTRACT

Herein, the preparation of a dendritic cell (DC) vaccine with radiation-induced apoptotic tumor cells and its immunological effects on bladder cancer in C57BL/6 mice was investigated. We used radiation to obtain a MB49 cell antigen that was sensitive to bone marrow-derived DCs to prepare a DC vaccine. An animal model of tumor-bearing mice was established with the MB49 mouse bladder cancer cell line. Animals were randomly allocated to an experimental group or control group. DC vaccine or phosphate-buffered saline was given 7 days before inoculation with tumor cells. Each group consisted of 2 subgroups in which tumor volume and the survival of tumor-bearing mice were recorded. Tumor volumes and average tumor masses of mice administered DC vaccine loaded with radiation-induced apoptotic cells were significantly lower than those in the control group (P < 0.01). Survival in the experimental group was also longer than that in the control group, and 2 mice survived without tumor formation. In the DC vaccine group, 2 mice were alive without tumor growth after 30 days, and no tumor was observed at 30 days after subcutaneous inoculation of MB49 cells. The DC vaccine loaded with radiation-induced apoptotic tumor cells had an anti-tumor effect and was associated with increased survival in a bladder cancer model in mice.


Subject(s)
Antigens, Neoplasm/metabolism , Apoptosis/radiation effects , Cancer Vaccines/immunology , Dendritic Cells/immunology , Urinary Bladder Neoplasms/immunology , Urinary Bladder Neoplasms/pathology , Animals , Bone Marrow Cells/cytology , Cell Count , Cell Differentiation , Cell Line, Tumor , Coculture Techniques , Female , Flow Cytometry , Mice , Mice, Inbred C57BL , Tumor Burden , X-Rays
4.
Genet Mol Res ; 14(2): 3889-96, 2015 Apr 27.
Article in English | MEDLINE | ID: mdl-25966160

ABSTRACT

The objectives of this study were to detect immunohistochemical subtypes of diffuse large B-cell lymphoma (DLBCL) of the head and neck, to compare the Hans, Choi, and Tally algorithms and to examine the significance of protein expression in these algorithms. This study included 103 DLBCL patients at Sichuan Cancer Hospital between May 2010 and October 2012. Immunohistochemistry was per-formed for CD10, B-cell lymphoma 6 protein (Bcl-6), mutated melanoma-associated antigen 1 (MUM1), germinal center B-cell-expressed transcript 1 (GCET1), forkhead box protein P1 (FOXP1), and LIM do-main only 2 (LMO2). Subtypes were determined according to the Hans, Choi, and Tally algorithms. Positive staining for CD10 was detected in 16 patients (15.53%), for Bcl-6 in 68 patients (66.02%), for MUM1 in 69 patients (66.99%), for GCET1 in 21 patients (20.39%), for FOXP1 in 75 patients (72.82%), and for LMO2 in 50 patients (48.54%). The Hans algorithm identified 26 patients (25.2%) with the germinal center B-cell (GCB) subtype and 77 (74.8%) with the activated B-cell (ABC) subtype. In the Choi algorithm, 25 patients (24.3%) were identified with the GCB subtype and 78 (75.7%) with the ABC subtype. In the Tally algorithm, 20 patients (19.4%) had the GCB subtype and 83 (80.6%) had the ABC subtype. Expression of CD10, MUM1, GCET1, FOXP1, and LMO2 correlated with algorithm (P < 0.05); however, Bcl-6 did not correlate with the Hans and Choi algorithms. DLBCL of the head and neck is most commonly the ABC subtype, not GCB. The Hans, Choi, and Tally algorithms were not significantly different.


Subject(s)
Head and Neck Neoplasms/metabolism , Lymphoma, Large B-Cell, Diffuse/metabolism , Adult , Aged , Algorithms , Female , Head and Neck Neoplasms/immunology , Humans , Immunohistochemistry , Immunophenotyping , Lymphoma, Large B-Cell, Diffuse/immunology , Male , Middle Aged
5.
Genet Mol Res ; 14(1): 2156-61, 2015 Mar 27.
Article in English | MEDLINE | ID: mdl-25867363

ABSTRACT

We examined the serum concentration of human epididymis protein (HE4) in patients with benign gynecological diseases complicated with chronic renal deficiency and its significance in the differential diagnosis of benign and malignant gynecological diseases. Serum HE4 and cancer antigen 125 concentrations were detected by chemiluminescence. Clinically or pathologically confirmed gynecological diseases were grouped and retrospectively analyzed, including 50 cases of gynecological benign diseases, 35 cases of non-mucinous epithelial ovarian carcinoma, 36 cases of endometrial adenocarcinoma, 15 cases of gynecological benign diseases patients complicated with chronic renal deficiency, 15 cases of gynecological diseases without chronic renal deficiency, and 30 normal controls. Serum HE4 values in the ovarian cancer group, endometrial cancer group, gynecological benign diseases with chronic renal deficiency group, and chronic renal deficiency group were significantly increased compared with the benign gynecological diseases and normal control groups, showing a significant difference (P < 0.001). A comparison of 4 groups with high HE4 showed that the HE4 level in the 2 groups with renal deficiency were higher than those in the ovarian cancer and endometrial cancer groups, but the difference was not significant (P > 0.05); there was no significant difference between 2 groups with renal deficiency (P > 0.05). Serum concentration of HE4 was high in patients with chronic renal deficiency, which should be distinguished during differential diagnosis of gynecological benign and malignant tumors in patients with chronic renal deficiency to avoid misdiagnosis.


Subject(s)
Genital Diseases, Female/blood , Proteins/metabolism , Renal Insufficiency, Chronic/blood , Biomarkers/blood , CA-125 Antigen/blood , Female , Genital Diseases, Female/complications , Genital Diseases, Female/diagnosis , Humans , Ovarian Neoplasms/blood , Ovarian Neoplasms/complications , Renal Insufficiency, Chronic/complications , Retrospective Studies , WAP Four-Disulfide Core Domain Protein 2
6.
Genet Mol Res ; 13(2): 2555-62, 2014 Jan 24.
Article in English | MEDLINE | ID: mdl-24615071

ABSTRACT

We investigated the polymorphisms of PRLR and FOLR1 genes in Xinong Saanen, Guanzhong, and Boer goat breeds by DNA sequencing and PCR-RFLP. Two novel SNPs were identified: KC109741: g.62130C>T in the 3ꞌ-UTR of goat gene PRLR, and KC136296: g.7884A>C in exon 3 of goat gene FOLR1. In the three goat breeds, the polymorphism information content was 0.20-0.27 at the g.62130C>T locus. At the g.7884A>C locus, it was 0.36 in Boer goats. The three goat breeds were in Hardy-Weinberg disequilibrium at the g.62130C>T locus. The g.62130C>T SNP was found to be significantly associated with milk production traits in Xinong Saanen and Guanzhong breeds. These results are consistent with the regulatory function of PRLR in mammary gland development, milk secretion, and expression of milk protein genes; they extend the spectrum of genetic variation of the goat PRLR gene, which could be useful for breeding programs.


Subject(s)
Folate Receptor 1/genetics , Genetic Association Studies , Milk , Receptors, Prolactin/genetics , 3' Untranslated Regions , Animals , Breeding , Genotype , Goats/genetics , Polymorphism, Single Nucleotide , Sequence Analysis, DNA
7.
Genet Mol Res ; 12(4): 4308-16, 2013 Feb 28.
Article in English | MEDLINE | ID: mdl-23479158

ABSTRACT

Kisspeptins, the product of the KISS1 gene, play an essential role in the regulation of reproductive functions, acting primarily at the hypothalamic level of the gonadotropic axis. We detected polymorphisms of the goat KISS1 gene in 723 individuals from three goat breeds (Xinong Saanen, Guanzhong, and Boer) by DNA pooling, PCR-RFLP, and DNA sequencing methods. We cloned the promoter sequence of this gene and found it to share high similarity with that of the bovine KISS1 promoter. Six TATA boxes were found in the goat KISS1 promoter region. Two novel SNPs (g.2124T>A and g.2270C>T) were identified in the intron 1 of the KISS1 gene of all three goat breeds. The three goat breeds were in Hardy-Weinberg disequilibrium at g.2124T>A and g.2270C>T loci. The g.2124T>A and g.2270C>T loci were closely linked in the three goat breeds (r2 > 0.33). The g.2124T>A and g.2270C>T SNPs were significantly associated with litter size, and the C1 female goats had a larger litter size than did those with the other genotypes. These results extend the spectrum of genetic variation of the goat KISS1 gene, which contributes to our knowledge of goat genetic resources for breeding programs.


Subject(s)
Goats/genetics , Kisspeptins/genetics , Litter Size/genetics , Polymorphism, Single Nucleotide , Promoter Regions, Genetic , Animals , Cloning, Molecular , Female , Gene Frequency , Genetic Association Studies , Genetic Loci , Genotype , Linkage Disequilibrium , Point Mutation , Polymorphism, Restriction Fragment Length , Sequence Analysis, DNA
8.
Genet Mol Res ; 12(4): 6351-5, 2013 Dec 06.
Article in English | MEDLINE | ID: mdl-24390984

ABSTRACT

Chinese raccoon dog (Nyctereutes procyonoides procyonoides) is one of the most important fur-bearing animal species. Information about the genetic background of farmed Chinese raccoon dogs is limited. In this study, 17 polymorphic microsatellite markers were isolated and identified from an (AC)n-microsatellite-enriched library of Chinese raccoon dogs. The number of alleles per locus ranged from 2 to 8 based on 48 individuals tested. The expected and observed heterozygosity and polymorphism information content per locus ranged from 0.383 to 0.8378, 0.3200 to 0.8696, and 0.3047 to 0.7947, respectively. Cross-species amplification of these loci in 2 other Canidae species indicated that 9 and 11 of these loci could also be amplified successfully in the arctic and silver fox, respectively. These microsatellite loci developed in the present report will provide useful tools for population genetic studies, individual identification, and phylogenetic analysis in the Chinese raccoon dog and other Canidae species.


Subject(s)
Dogs/genetics , Foxes/genetics , Microsatellite Repeats/genetics , Nucleic Acid Amplification Techniques/veterinary , Raccoon Dogs/genetics , Alleles , Animals , China , Gene Library , Genotype , Polymorphism, Genetic
9.
Genet Mol Res ; 10(2): 731-8, 2011 Apr 26.
Article in English | MEDLINE | ID: mdl-21523652

ABSTRACT

Polymorphisms of the CART gene were investigated by PCR-single-strand conformation polymorphism analysis in 540 samples from 10 goat breeds. Ten novel single-nucleotide polymorphisms as well as three microsatellites were detected; a mutation, 77T → C, led to an amino acid change (Leu → Ser). Associations between polymorphic loci and reproductive traits were analyzed in Chuandong White, Guizhou White and Gulin Ma breeds. Mutation at position 524 had no significant effect on litter size in these three goat breeds. The polymorphism 539C → A differed significantly among the three breeds (P < 0.05); C(7)T(8)/C(9)T(8) at 939 was associated with larger litter size (P < 0.05) than genotypes C(7)T(8)/C(7)T(8) and C(7)T(8)/C(8)T(8). No significant association of birth weight was found with gene variation (524C → T, 539C → A and 939 CnTn). These findings could be valuable for marker-assisted selection for goat breeding.


Subject(s)
Goats/genetics , Nerve Tissue Proteins/genetics , Polymorphism, Single Nucleotide , Polymorphism, Single-Stranded Conformational/genetics , Reproduction/genetics , Animals , Base Sequence , Biomarkers , Birth Weight/genetics , Breeding , Litter Size/genetics , Microsatellite Repeats/genetics , Polymerase Chain Reaction , Sequence Analysis, DNA
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