The digestive tract sections of the sea cucumber Isostichopus badionotus reveal differences in composition, diversity, and functionality of the gut microbiota.

For the first time, this study analyses the composition and diversity of the gut microbiota of Isostichopus badionotus in captivity, using high-throughput 16S rRNA sequencing, and predicts the metagenomic functions of the microbiota. The results revealed a different composition of the gut microbiota for the foregut (FG) and midgut (MG) compared to the hindgut (HG), with a predominance of Proteobacteria, followed by Actinobacteria, Bacteroidetes, and Firmicutes. The FG and MG demonstrated a greater bacterial diversity compared to the HG. In addition, a complex network of interactions was observed at the genus level and identified some strains with probiotic and bioremediation potentials, such as Acinetobacter, Ruegeria, Streptococcus, Lactobacillus, Pseudomonas, Enterobacter, Aeromonas, Rhodopseudomonas, Agarivorans, Bacillus, Enterococcus, Micrococcus, Bifidobacterium, and Shewanella. Predicting metabolic pathways revealed that the bacterial composition in each section of the intestine participates in different physiological processes such as metabolism, genetic and environmental information processing, organismal systems, and cellular processes. Understanding and manipulating microbe--host-environment interactions and their associated functional capacity could substantially contribute to achieving more sustainable aquaculture systems for I. badionotus.

Seasonal shifts of arbuscular mycorrhizal fungi in Cocos nucifera roots in Yucatan, Mexico.

The diversity and community structure of arbuscular mycorrhizal fungi (AMF) associated with coconut (Cocos nucifera) roots was evaluated by next generation sequencing (NGS) using partial sequences of the 18S rDNA gene and by spore isolation and morphological identification from rhizosphere soil. Root samples from six different Green Dwarf coconut plantations and from one organic plantation surrounded by tropical dry forest along the coastal sand dunes in Yucatan, Mexico, were collected during the rainy and dry seasons. In total, 14 root samples were sequenced with the Illumina MiSeq platform. Additionally, soil samples from the dry season were collected to identify AMF glomerospores. Based on a 95-97% similarity, a total of 36 virtual taxa (VT) belonging to nine genera were identified including one new genus-like clade. Glomus was the most abundant genus, both in number of VT and sequences. The comparison of dry and rainy season samples revealed differences in the richness and composition of AMF communities colonizing coconut roots. Our study shows that the main AMF genera associated with coconut tree roots in all samples were Glomus, Sclerocystis, Rhizophagus, Redeckera, and Diversispora. Based on glomerospore morphology, 22 morphospecies were recorded among which 14 were identified to species. Sclerocystis sinuosa, Sclerocystis rubiformis, Glomus microaggregatum, and Acaulospora scrobiculata were dominant in field rhizosphere samples. This is the first assessment of the composition of AMF communities colonizing coconut roots in rainy and dry seasons. It is of importance for selection of AMF species to investigate for their potential application in sustainable agriculture of coconut.

Diversidad de macro-invertebrados en sistemas silvopastoriles del sur de Quintana Roo, México

La diversidad de macro-invertebrados está relacionada con el estado de conservación del suelo, no obstante, la remoción de la cubierta vegetal natural para el establecimiento de sistemas ganaderos extensivos afecta su integridad. Una estrategia para la conservación de estos organismos es la implementación de sistemas silvopastoriles; no obstante, en el sureste de México la información aún es limitada. El propósito del presente estudio fue evaluar y comparar la riqueza y la abundancia de macro-invertebrados en cuatro agro-ecosistemas contrastantes: dos sistemas silvopastoriles conformados por Leucaena leucocephala y pastos asociados (i.e. Panicum máximum cv mombaza y Cynodon plectostachyus), un pastizal convencional de Brachiaria brizantha con árboles dispersos en baja densidad y una selva mediana subperennifolia. En cada sistema se delimitó una superficie de una hectárea y se estableció un transecto de 50 m de longitud en los que se colocaron cinco trampas de caída tipo pit-fall cada 10 m. El muestreo se realizó en febrero y mayo 2018 y en cada mes se realizaron cinco recolectas con intervalos de cinco días. Se recolectaron un total de 1 737 organismos pertenecientes a 10 órdenes de la clase Insecta y uno a la clase Gastropoda. Los sistemas con mayor abundancia de macro-invertebrados fueron el sistema de selva media subperennifolia (923 individuos) y el sistema silvopastoril de L. leucocephala con C. plectostachyus (354 individuos). Los órdenes más abundantes fueron: Hymenoptera, Coleoptera, Araneae y Orthoptera. La mayor diversidad de macro-invertebrados se presentó en los sistemas silvopastoriles de L. leucocephala con P. maximum (H'=1.58) y L. leucocephala con C. plectostachyus (H´=1.44). Los resultados encontrados muestran que los sistemas pecuarios manejados con componentes leñosos (árboles/arbustos) albergan una riqueza y abundancia importante de órdenes de macro-invertebrados en comparación con sistemas como selva mediana subperennifolia. Esta diversidad de macro-invertebrates podría contribuir a la integridad y funcionalidad de los agro-ecosistemas.

The diversity of macro-invertebrates is related to the state of disturbance of the soil, caused mainly by the land-use change for agricultural activities. A strategy for the conservation of these organisms is the implementation of diversified production systems such as silvopastoral systems. However, in the Southeast of Mexico, information is still limited. The aim of the present study was to evaluate and compare the richness, abundance and composition of macro-invertebrates in four contrasting agro-ecosystems: two silvopastoral systems made of Leucaena leucocephala and associated pastures (i.e. Panicum maximum cv mombaza and Cynodon plectostachyus), a pasture of Brachiaria brizantha with scattered trees in low density and, a medium-statured tropical dry forest. In each system, an area of one hectare was delimited and a transect of 50 m in length was established in which five pit-fall traps were placed every 10 m. The sampling was carried out in February and May of 2018 and in each month five collections were made with five-day intervals. A total of 1 737 organisms belonging to 10 orders of the class Insecta and one of the class Gastropoda were collected. The medium-statured tropical dry forest (923 individuals) and the silvopastoral systems of L. leucocephala with C. Plectostachyus (354 individuals) show the highest abundance of macro-invertebrates. The most abundant genera were: Hymenoptera, Coleoptera, Aracninae and Orthoptera. The higher macro-invertebrate diversity was found in the silvopastoral systems of L. leucocephala with P. maximum (H '= 1.58) and L. leucocephala with C. plectostachyus (H' = 1.44). The results show that livestock systems managed with woody components (trees or shrubs) are home of an important abundance and richness of macro-invertebrates, compared to tropical forests. This diversity of macro-invertebrates may contribute to the integrity and functionality of the agro-ecosystems.

The male ejaculate as inhibitor of female remating in two tephritid flies.

The inhibition of female receptivity after copulation is usually related to the quality of the first mating. Males are able to modulate female receptivity through various mechanisms. Among these is the transfer of the ejaculate composed mainly by sperm and accessory gland proteins (AGPs). Here we used the South American fruit fly Anastrepha fraterculus (where AGP injections inhibit female receptivity) and the Mexican fruit fly Anastrepha ludens (where injection of AGPs failed to inhibit receptivity) as study organisms to test which mechanisms are used by males to prevent remating. In both species, neither the act of copulation without ejaculate transfer nor sperm stored inhibited female receptivity. Moreover, using multiply mated sterile and wild males in Mex flies we showed that the number of sperm stored by females varied according to male fertility status and number of previous matings, while female remating did not. We suggest female receptivity in both flies is inhibited by the mechanical and/or physiological effect of the full ejaculate. This finding brings us closer to understanding the mechanisms through which female receptivity can be modulated.