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1.
Sci Rep ; 9(1): 5341, 2019 03 29.
Article in English | MEDLINE | ID: mdl-30926857

ABSTRACT

Changes in environmental pH can induce morphological changes in empty proteinaceous shells of bacteriophages in vitro that are very similar to changes occurring in viral capsids in vivo after encapsidation of DNA. These changes in capsid shape and size cannot be explained with a simple elastic model alone. We propose a new theoretical framework that combines the elasticity of thin icosahedral shells with the pH dependence of capsid charge distribution. Minimization of the sum of elastic and electrostatic free energies leads to equilibrium shapes of viral shells that depend on a single elastic parameter and the detailed configuration of the imbedded protein charges. Based on the in vitro shell reconstructions of bacteriophage HK97 we elucidate the details of how the reversible transition between Prohead II and Expansion Intermediate II states of the HK97 procapsid is induced by pH changes, as well as some other features of the bacteriophage maturation.


Subject(s)
Bacteriophages/physiology , Capsid , Hydrogen-Ion Concentration , Models, Theoretical , Virion , Algorithms , Bacteriophages/ultrastructure , Capsid/ultrastructure , Virion/ultrastructure
2.
Nanoscale ; 7(41): 17289-98, 2015 Nov 07.
Article in English | MEDLINE | ID: mdl-26228582

ABSTRACT

Electrostatics is one of the fundamental driving forces of the interaction between biomolecules in solution. In particular, the recognition events between viruses and host cells are dominated by both specific and non-specific interactions and the electric charge of viral particles determines the electrostatic force component of the latter. Here we probe the charge of individual viruses in liquid milieu by measuring the electrostatic force between a viral particle and the Atomic Force Microscope tip. The force spectroscopy data of co-adsorbed ϕ29 bacteriophage proheads and mature virions, adenovirus and minute virus of mice capsids is utilized for obtaining the corresponding density of charge for each virus. The systematic differences of the density of charge between the viral particles are consistent with the theoretical predictions obtained from X-ray structural data. Our results show that the density of charge is a distinguishing characteristic of each virus, depending crucially on the nature of the viral capsid and the presence/absence of the genetic material.


Subject(s)
Adenoviridae , Bacillus Phages , Minute Virus of Mice , Virion , Adenoviridae/chemistry , Adenoviridae/ultrastructure , Animals , Bacillus Phages/chemistry , Bacillus Phages/ultrastructure , Mice , Microscopy, Atomic Force , Minute Virus of Mice/chemistry , Minute Virus of Mice/ultrastructure , Static Electricity , Virion/chemistry , Virion/ultrastructure
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