Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 62
Filter
Add more filters











Publication year range
3.
Article in English | MEDLINE | ID: mdl-32179099

ABSTRACT

We previously detected a submicromolar concentration of lysophosphatidic acid (LPA) in human saliva. Here, we compare LPA concentrations in human gingival crevicular fluid (GCF) from patients with periodontitis and healthy controls, and examine how the local LPA levels are regulated enzymatically. The concentrations of LPA and its precursor lysophospholipids in GCF was measured by liquid chromatography-tandem mass spectrometry. The LPA-producing and LPA-degrading enzymatic activities were measured by quantifying the liberated choline and free fatty acid, respectively. The concentration of LPA in GCF of periodontitis patients was lower than that of healthy controls, due to higher soluble lysophospholipase activity toward LPA. LPA was found to prevent survival of Sa3, a human gingival epithelium-derived tumor cell line, activate Sa3 through Ca2+ mobilization, and release interleukin 6 from Sa3 in vitro. Furthermore, local injection of LPA into the gingiva attenuated ligature-induced experimental alveolar bone loss induced by oral bacteria inoculation in a rat model of periodontitis in vivo. A high concentration of LPA in human GCF is necessary to maintain normal gingival epithelial integrity and function, protecting the progression of periodontitis.


Subject(s)
Alveolar Bone Loss/metabolism , Gingival Crevicular Fluid/metabolism , Lysophospholipase/metabolism , Lysophospholipids/metabolism , Periodontitis/metabolism , Adult , Aged , Alveolar Bone Loss/etiology , Alveolar Bone Loss/prevention & control , Animals , Cells, Cultured , Female , Humans , Lysophospholipids/therapeutic use , Male , Middle Aged , Periodontitis/complications , Periodontitis/drug therapy , Rats , Rats, Wistar
4.
Gene ; 685: 42-49, 2019 Feb 15.
Article in English | MEDLINE | ID: mdl-30393190

ABSTRACT

Trehalose is a disaccharide with a pivotal role in plant growth and development. In contrast to the recent advances in understanding trehalose biosynthesis in plants, their catabolism of trehalose is poorly understood. Here, we isolated and characterized a trehalase gene, OsTRE1, in rice (Oryza sativa L.). An expression analysis in young seedlings revealed that OsTRE1 is induced by stresses such as salt, drought, and chilling. ABA treatment also transiently upregulated OsTRE1 expression. The accumulation of OsTRE1 mRNA in response to 150 mM NaCl was consistent with an increased trehalase activity in the roots. Transgenic rice plants overexpressing OsTRE1 showed remarkable increases in trehalase activity and dramatic decreases in trehalose abundance compared with the wild type, with little change in the levels of other soluble sugars, such as glucose, fructose, and sucrose. Callus cells generated from the transgenic lines overexpressing OsTRE1 were able to grow using trehalose as their sole carbon source. These data indicated that OsTRE1 is a functional trehalase gene in rice. The OsTRE1 overexpressors did not have notable morphological alterations or growth defects but exhibited enhanced salt tolerance, suggesting the involvement of OsTRE1 in salt stress tolerance in rice.


Subject(s)
Oryza/genetics , Salt Stress/genetics , Salt Tolerance/genetics , Gene Expression Regulation, Plant , Oryza/metabolism , Plant Development/genetics , Plants, Genetically Modified , Stress, Physiological/genetics , Sugars/metabolism , Trehalose/metabolism
5.
J Biotechnol ; 228: 3-7, 2016 Jun 20.
Article in English | MEDLINE | ID: mdl-27080445

ABSTRACT

TAD1 (Triticum aestivum defensin 1) is induced during cold acclimation in winter wheat and encodes a plant defensin with antimicrobial activity. In this study, we demonstrated that recombinant TAD1 protein inhibits hyphal growth of the snow mold fungus, Typhula ishikariensis in vitro. Transgenic wheat plants overexpressing TAD1 were created and tested for resistance against T. ishikariensis. Leaf inoculation assays revealed that overexpression of TAD1 confers resistance against the snow mold. In addition, the TAD1-overexpressors showed resistance against Fusarium graminearum, which causes Fusarium head blight, a devastating disease in wheat and barley. These results indicate that TAD1 is a candidate gene to improve resistance against multiple fungal diseases in cereal crops.


Subject(s)
Agaricales/drug effects , Defensins/pharmacology , Disease Resistance/physiology , Plant Proteins/pharmacology , Plants, Genetically Modified/physiology , Triticum/physiology , Defensins/genetics , Defensins/metabolism , Disease Resistance/genetics , Host-Pathogen Interactions , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Plants, Genetically Modified/microbiology , Triticum/genetics , Triticum/microbiology
6.
Br J Nutr ; 114(11): 1774-83, 2015 Dec 14.
Article in English | MEDLINE | ID: mdl-26395755

ABSTRACT

Obesity is one of the major health problems throughout the world. The present study investigated the preventive effect of epilactose--a rare non-digestible disaccharide--on obesity and metabolic disorders in mice fed high-fat (HF) diets. Feeding with HF diets increased body weight gain, fat pad weight and adipocyte size in mice (P<0·01), and these increases were effectively prevented by the use of supplemental epilactose without influencing food intake (P<0·01). Caecal pools of SCFA such as acetic and propionic acids in mice fed epilactose were higher compared with mice not receiving epilactose. Supplemental epilactose increased the expression of uncoupling protein (UCP)-1, which enhances energy expenditure, to 2-fold in the gastrocnemius muscle (P=0·04) and to 1·3-fold in the brown adipose tissue (P=0·02) in mice fed HF diets. Feeding HF diets induced pro-inflammatory macrophage infiltration into white adipose tissue, as indicated by the increased expression of monocyte chemotactic protein-1, TNF-α and F4/80, and these increases were attenuated by supplemental epilactose. In differentiated myogenic-like C2C12 cells, propionic acid, but not acetic or n-butyric acids, directly enhanced UCP-1 expression by approximately 2-fold (P<0·01). Taken together, these findings indicate that the epilactose-mediated increase in UCP-1 in the skeletal muscle and brown adipose tissue can enhance whole-body energy expenditure, leading to effective prevention of obesity and metabolic disorders in mice fed HF diets. It is suggested that propionic acid--a bacterial metabolite--acts as a mediator to induce UCP-1 expression in skeletal muscles.


Subject(s)
Anti-Obesity Agents/therapeutic use , Disaccharides/therapeutic use , Ion Channels/agonists , Mitochondrial Proteins/agonists , Muscle, Skeletal/metabolism , Obesity/prevention & control , Prebiotics , Up-Regulation , Adipose Tissue, Brown/immunology , Adipose Tissue, Brown/metabolism , Adipose Tissue, Brown/pathology , Adipose Tissue, White/immunology , Adipose Tissue, White/metabolism , Adipose Tissue, White/pathology , Animals , Anti-Inflammatory Agents, Non-Steroidal/metabolism , Anti-Inflammatory Agents, Non-Steroidal/therapeutic use , Anti-Obesity Agents/metabolism , Cell Line , Diet, High-Fat/adverse effects , Disaccharides/metabolism , Energy Metabolism , Fermentation , Gastrointestinal Microbiome , Ion Channels/genetics , Ion Channels/metabolism , Macrophage Activation , Male , Mice, Inbred C57BL , Mitochondrial Proteins/genetics , Mitochondrial Proteins/metabolism , Muscle, Skeletal/immunology , Obesity/immunology , Obesity/metabolism , Obesity/microbiology , Propionates/metabolism , Random Allocation , Uncoupling Protein 1
7.
Acta Crystallogr D Biol Crystallogr ; 71(Pt 6): 1382-91, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26057678

ABSTRACT

α-Glucosidases, which catalyze the hydrolysis of the α-glucosidic linkage at the nonreducing end of the substrate, are important for the metabolism of α-glucosides. Halomonas sp. H11 α-glucosidase (HaG), belonging to glycoside hydrolase family 13 (GH13), only has high hydrolytic activity towards the α-(1 → 4)-linked disaccharide maltose among naturally occurring substrates. Although several three-dimensional structures of GH13 members have been solved, the disaccharide specificity and α-(1 → 4) recognition mechanism of α-glucosidase are unclear owing to a lack of corresponding substrate-bound structures. In this study, four crystal structures of HaG were solved: the apo form, the glucosyl-enzyme intermediate complex, the E271Q mutant in complex with its natural substrate maltose and a complex of the D202N mutant with D-glucose and glycerol. These structures explicitly provide insights into the substrate specificity and catalytic mechanism of HaG. A peculiar long ß â†’ α loop 4 which exists in α-glucosidase is responsible for the strict recognition of disaccharides owing to steric hindrance. Two residues, Thr203 and Phe297, assisted with Gly228, were found to determine the glycosidic linkage specificity of the substrate at subsite +1. Furthermore, an explanation of the α-glucosidase reaction mechanism is proposed based on the glucosyl-enzyme intermediate structure.


Subject(s)
alpha-Glucosidases/metabolism , Amino Acid Sequence , Catalysis , Crystallization , Molecular Sequence Data , Sequence Homology, Amino Acid , Substrate Specificity , alpha-Glucosidases/chemistry
8.
Biosci Biotechnol Biochem ; 78(2): 263-70, 2014.
Article in English | MEDLINE | ID: mdl-25036679

ABSTRACT

4-O-ß-D-Mannosyl-D-glucose phosphorylase (MGP), found in anaerobes, converts 4-O-ß-D-mannosyl-D-glucose (Man-Glc) to α-D-mannosyl phosphate and D-glucose. It participates in mannan metabolism with cellobiose 2-epimerase (CE), which converts ß-1,4-mannobiose to Man-Glc. A putative MGP gene is present in the genome of the thermophilic aerobe Rhodothermus marinus (Rm) upstream of the gene encoding CE. Konjac glucomannan enhanced production by R. marinus of MGP, CE, and extracellular mannan endo-1,4-ß-mannosidase. Recombinant RmMGP catalyzed the phosphorolysis of Man-Glc through a sequential bi-bi mechanism involving ternary complex formation. Its molecular masses were 45 and 222 kDa under denaturing and nondenaturing conditions, respectively. Its pH and temperature optima were 6.5 and 75 °C, and it was stable between pH 5.5-8.3 and below 80 °C. In the reverse reaction, RmMGP had higher acceptor preferences for 6-deoxy-D-glucose and D-xylose than R. albus NE1 MGP. In contrast to R. albus NE1 MGP, RmMGP utilized methyl ß-D-glucoside and 1,5-anhydro-D-glucitol as acceptor substrates.


Subject(s)
Mannosyltransferases/chemistry , Mannosyltransferases/metabolism , Rhodothermus/enzymology , Amino Acid Sequence , Enzyme Stability , Hydrogen-Ion Concentration , Kinetics , Mannans/metabolism , Molecular Sequence Data , Phosphorylation , Substrate Specificity , Temperature
9.
Acta Crystallogr F Struct Biol Commun ; 70(Pt 4): 464-6, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24699739

ABSTRACT

The α-glucosidase HaG from the halophilic bacterium Halomonas sp. strain H11 catalyzes the hydrolysis of the glucosidic linkage at the nonreducing end of α-glucosides, such as maltose and sucrose, to release α-glucose. Based on its amino-acid sequence, this enzyme is classified as a member of glycoside hydrolase family 13. HaG has three unique characteristics: (i) a very narrow substrate specificity, almost exclusively hydrolyzing disaccharides; (ii) activation by monovalent cations, such as K(+), Rb(+), Cs(+) and NH4(+); and (iii) high transfer activity of the glucose moiety to the OH group of low-molecular-weight compounds, including glycerol and 6-gingerol. Crystallographic studies have been performed in order to understand these special features. An expression vector was constructed and recombinant HaG protein was overexpressed, purified and crystallized. A data set to 2.15 Šresolution was collected and processed. The crystal belonged to space group P212121, with unit-cell parameters a = 60.2, b = 119.2, c = 177.2 Å. The structure has been determined by molecular replacement using the isomaltulose synthase PalI as the search model (PDB entry 1m53).


Subject(s)
Cations, Monovalent/metabolism , Crystallization/methods , Crystallography, X-Ray/methods , Halomonas/enzymology , Intramolecular Transferases/chemistry , Recombinant Proteins/chemistry , alpha-Glucosidases/chemistry , Intramolecular Transferases/genetics , Intramolecular Transferases/metabolism , Models, Molecular , Protein Conformation , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Substrate Specificity , alpha-Glucosidases/genetics , alpha-Glucosidases/metabolism
10.
J Biol Chem ; 289(6): 3405-15, 2014 Feb 07.
Article in English | MEDLINE | ID: mdl-24362032

ABSTRACT

Cellobiose 2-epimerase (CE) reversibly converts d-glucose residues into d-mannose residues at the reducing end of unmodified ß1,4-linked oligosaccharides, including ß-1,4-mannobiose, cellobiose, and lactose. CE is responsible for conversion of ß1,4-mannobiose to 4-O-ß-d-mannosyl-d-glucose in mannan metabolism. However, the detailed catalytic mechanism of CE is unclear due to the lack of structural data in complex with ligands. We determined the crystal structures of halothermophile Rhodothermus marinus CE (RmCE) in complex with substrates/products or intermediate analogs, and its apo form. The structures in complex with the substrates/products indicated that the residues in the ß5-ß6 loop as well as those in the inner six helices form the catalytic site. Trp-322 and Trp-385 interact with reducing and non-reducing end parts of these ligands, respectively, by stacking interactions. The architecture of the catalytic site also provided insights into the mechanism of reversible epimerization. His-259 abstracts the H2 proton of the d-mannose residue at the reducing end, and consistently forms the cis-enediol intermediate by facilitated depolarization of the 2-OH group mediated by hydrogen bonding interaction with His-200. His-390 subsequently donates the proton to the C2 atom of the intermediate to form a d-glucose residue. The reverse reaction is mediated by these three histidines with the inverse roles of acid/base catalysts. The conformation of cellobiitol demonstrated that the deprotonation/reprotonation step is coupled with rotation of the C2-C3 bond of the open form of the ligand. Moreover, it is postulated that His-390 is closely related to ring opening/closure by transferring a proton between the O5 and O1 atoms of the ligand.


Subject(s)
Bacterial Proteins/chemistry , Carbohydrate Epimerases/chemistry , Oligosaccharides/chemistry , Rhodothermus/enzymology , Catalysis , Glucose/chemistry , Protein Structure, Secondary
11.
FEBS Open Bio ; 3: 438-42, 2013.
Article in English | MEDLINE | ID: mdl-24251108

ABSTRACT

Cold shock proteins (CSPs) of bacteria are produced in response to cold and function as RNA chaperones that are essential for cold adaptation. Arabidopsis thaliana COLD SHOCK DOMAIN PROTEIN 3 (AtCSP3) shares a domain with bacterial CSPs and is involved in acquisition of freezing tolerance. Our previous study revealed that many of the genes that are down regulated in an AtCSP3 knockout mutant (atcsp3-2) are functionally associated with responses to salt and drought as well as cold. Here, we examined the involvement of AtCSP3 in salt and drought stress tolerance. We found that AtCSP3 is induced during salt and drought stresses, and is regulated by ABA. A knockout mutant of AtCSP3 (atcsp3-2) showed lower survival rates after salt and drought stress treatments. Conversely, the AtCSP3-overexpressing plants displayed higher survival rates after treatment with these stresses. Most of the genes that were down regulated in the atcsp3-2 mutant were found to be inducible upon salt and drought stresses, and upregulated in the AtCSP3-overexpressors. Together, our data demonstrates that AtCSP3 is involved in the regulation of salt and drought stress tolerance in Arabidopsis.

12.
Biosci Biotechnol Biochem ; 77(9): 1854-9, 2013.
Article in English | MEDLINE | ID: mdl-24018661

ABSTRACT

The higher plant ADP-glucose (ADPG) pyrophosphorylase (AGPase), composed of two small subunits and two large subunits (LSs), produces ADPG, the sole substrate for starch biosynthesis from α-D-glucose 1-phosphate and ATP. This enzyme controls a key step in starch synthesis as its catalytic activity is activated by 3-phosphoglycerate (3-PGA) and inhibited by orthophosphate (Pi). Previously, two mutations in the LS of potato AGPase (PLS), PLS-E38K and PLS-G101N, were found to increase sensitivity to 3-PGA activation and tolerance to Pi inhibition. In the present study, the double mutated enzyme (PLS-E38K/G101N) was evaluated. In a complementation assay of ADPG synthesis in an Escherichia coli mutant defective in the synthesis of ADPG, expression of PLS-E38K/G101N mediated higher glycogen production than wild-type potato AGPase (PLS-WT) and the single mutant enzymes, PLS-E38K and PLS-G101N, individually. Purified PLS-E38K/G101N showed higher sensitivity to 3-PGA activation and tolerance to Pi inhibition than PLS-E38K or PLS-G101N. Moreover, the enzyme activities of PLS-E38K, PLS-G101N, and PLS-E38K/G101N were more readily stimulated by other major phosphate-ester metabolites, such as fructose 6-phosphate, fructose 2,6-bisphosphate, and ribose 5-phosphate, than was that of PLS-WT. Hence, although the specific enzyme activities of the LS mutants toward 3-PGA were impaired to some extent by the mutations, our results suggest that their enhanced allosteric regulatory properties and the broadened effector selectivity gained by the same mutations not only offset the lowered enzyme catalytic turnover rates but also increase the net performance of potato AGPase in vivo in view of increased glycogen production in bacterial cells.


Subject(s)
Glucose-1-Phosphate Adenylyltransferase/chemistry , Glucose-1-Phosphate Adenylyltransferase/metabolism , Mutant Proteins/chemistry , Mutant Proteins/metabolism , Mutation , Plant Tubers/enzymology , Solanum tuberosum/enzymology , Allosteric Regulation/drug effects , Enzyme Activation/drug effects , Gene Expression Regulation, Enzymologic/drug effects , Glucose-1-Phosphate Adenylyltransferase/genetics , Glyceric Acids/pharmacology , Kinetics , Models, Molecular , Mutant Proteins/genetics , Protein Multimerization , Protein Structure, Quaternary
13.
Biosci Biotechnol Biochem ; 77(9): 1867-73, 2013.
Article in English | MEDLINE | ID: mdl-24018662

ABSTRACT

α-Amylases (EC 3.2.1.1) hydrolyze internal α-1,4-glucosidic linkages of starch and related glucans. Bacillus sp. AAH-31 produces an alkalophilic thermophilic α-amylase (AmyL) of higher molecular mass, 91 kDa, than typical bacterial α-amylases. In this study, the AmyL gene was cloned to determine its primary structure, and the recombinant enzyme, produced in Escherichia coli, was characterized. AmyL shows no hydrolytic activity towards pullulan, but the central region of AmyL (Gly395-Asp684) was similar to neopullulanase-like α-amylases. In contrast to known neopullulanase-like α-amylases, the N-terminal region (Gln29-Phe102) of AmyL was similar to carbohydrate-binding module family 20 (CBM20), which is involved in the binding of enzymes to starch granules. Recombinant AmyL showed more than 95% of its maximum activity in a pH range of 8.2-10.5, and was stable below 65 °C and from pH 6.4 to 11.9. The kcat values for soluble starch, γ-cyclodextrin, and maltotriose were 103 s(-1), 67.6 s(-1), and 5.33 s(-1), respectively, and the Km values were 0.100 mg/mL, 0.348 mM, and 2.06 mM, respectively. Recombinant AmyL did not bind to starch granules. But the substitution of Trp45 and Trp84, conserved in site 1 of CBM20, with Ala reduced affinity to soluble starch, while the mutations did not affect affinity for oligosaccharides. Substitution of Trp61, conserved in site 2 of CBM20, with Ala enhanced hydrolytic activity towards soluble starch, indicating that site 2 of AmyL does not contribute to binding to soluble long-chain substrates.


Subject(s)
Bacillus/enzymology , Temperature , alpha-Amylases/chemistry , alpha-Amylases/metabolism , Amino Acid Sequence , Bacillus/genetics , Base Sequence , Cloning, Molecular , Conserved Sequence , Hydrogen-Ion Concentration , Molecular Sequence Data , Mutagenesis, Site-Directed , Mutation , Protein Structure, Tertiary , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Analysis , alpha-Amylases/biosynthesis , alpha-Amylases/genetics
14.
Carbohydr Res ; 379: 21-5, 2013 Sep 20.
Article in English | MEDLINE | ID: mdl-23845516

ABSTRACT

Cellobiose phosphorylase (EC 2.4.1.20, CBP) catalyzes the reversible phosphorolysis of cellobiose to α-D-glucose 1-phosphate (Glc1P) and d-glucose. Cys485, Tyr648, and Glu653 of CBP from Ruminococcus albus, situated at the +1 subsite, were mutated to modulate acceptor specificity. C485A, Y648F, and Y648V were active enough for analysis. Their acceptor specificities were compared with the wild type based on the apparent kinetic parameters determined in the presence of 10 mM Glc1P. C485A showed higher preference for D-glucosamine than the wild type. Apparent kcat/Km values of Y648F for D-mannose and 2-deoxy-D-glucose were 8.2- and 4.0-fold higher than those of the wild type, respectively. Y648V had synthetic activity toward N-acetyl-D-glucosamine, while the other variants did not. The oligosaccharide production in the presence of the same concentrations of wild type and each mutant was compared. C485A produced 4-O-ß-D-glucopyranosyl-D-glucosamine from 10 mM Glc1P and D-glucosamine at a rate similar to the wild type. Y648F and Y648V produced 4-O-ß-D-glucopyranosyl-D-mannose and 4-O-ß-D-glucopyranosyl-N-acetyl-D-glucosamine much more rapidly than the wild type when D-mannose and N-acetyl-D-glucosamine were used as acceptors, respectively. After a 4h reaction, the amounts of 4-O-ß-D-glucopyranosyl-D-mannose and 4-O-ß-D-glucopyranosyl-N-acetyl-D-glucosamine produced by Y648F and Y648V were 5.9- and 12-fold higher than the wild type, respectively.


Subject(s)
Glucosyltransferases/genetics , Glucosyltransferases/metabolism , Mutagenesis, Site-Directed , Ruminococcus/enzymology , Biocatalysis , Glucosyltransferases/chemistry , Hydrogen-Ion Concentration , Oligosaccharides/biosynthesis , Oligosaccharides/chemistry , Substrate Specificity , Temperature , Time Factors
15.
FEBS J ; 280(18): 4463-73, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23802549

ABSTRACT

Ruminococcus albus has the ability to intracellularly degrade cello-oligosaccharides primarily via phosphorolysis. In this study, the enzymatic characteristics of R. albus cellodextrin phosphorylase (RaCDP), which is a member of glycoside hydrolase family 94, was investigated. RaCDP catalyzes the phosphorolysis of cellotriose through an ordered 'bi bi' mechanism in which cellotriose binds to RaCDP before inorganic phosphate, and then cellobiose and glucose 1-phosphate (Glc1P) are released in that order. Among the cello-oligosaccharides tested, RaCDP had the highest phosphorolytic and synthetic activities towards cellohexaose and cellopentaose, respectively. RaCDP successively transferred glucosyl residues from Glc1P to the growing cello-oligosaccharide chain, and insoluble cello-oligosaccharides comprising a mean of eight residues were produced. Sophorose, laminaribiose, ß-1,4-xylobiose, ß-1,4-mannobiose and cellobiitol served as acceptors for RaCDP. RaCDP had very low affinity for phosphate groups in both the phosphorolysis and synthesis directions. A sequence comparison revealed that RaCDP has Gln at position 646 where His is normally conserved in the phosphate binding sites of related enzymes. A Q646H mutant showed approximately twofold lower apparent K(m) values for inorganic phosphate and Glc1P than the wild-type. RaCDP has Phe at position 633 corresponding to Tyr and Val in the +1 subsites of cellobiose phosphorylase and N,N'-diacetylchitobiose phosphorylase, respectively. A F633Y mutant showed higher preference for cellobiose over ß-1,4-mannobiose as an acceptor substrate in the synthetic reaction than the wild-type. Furthermore, the F633Y mutant showed 75- and 1100-fold lower apparent Km values for inorganic phosphate and Glc1P, respectively, in phosphorolysis and synthesis of cellotriose.


Subject(s)
Bacterial Proteins/metabolism , Cellulose/analogs & derivatives , Dextrins/metabolism , Glucosyltransferases/metabolism , Phenylalanine/metabolism , Ruminococcus/chemistry , Bacterial Proteins/chemistry , Bacterial Proteins/classification , Bacterial Proteins/genetics , Cellobiose/chemistry , Cellobiose/metabolism , Cellulose/chemistry , Cellulose/metabolism , Dextrins/chemistry , Escherichia coli/genetics , Escherichia coli/metabolism , Glucosyltransferases/chemistry , Glucosyltransferases/classification , Glucosyltransferases/genetics , Hydrolysis , Kinetics , Mutation , Oligosaccharides/chemistry , Oligosaccharides/metabolism , Phenylalanine/chemistry , Phenylalanine/genetics , Phylogeny , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Ruminococcus/enzymology , Substrate Specificity , Thermodynamics
16.
Biosci Biotechnol Biochem ; 77(5): 934-9, 2013.
Article in English | MEDLINE | ID: mdl-23649259

ABSTRACT

ß-Glucosidases (EC 3.2.1.21) split ß-glucosidic linkages at the non-reducing end of glucosides and oligosaccharides to release ß-D-glucose. One of the important functions of plant ß-glucosidase is deglucosylation of inactive glucosides of phytohormones to regulate levels of active hormones. Tuberonic acid is a jasmonate-related compound that shows tuber-inducing activity in the potato. We have identified two enzymes, OsTAGG1 and OsTAGG2, that have hydrolytic activity towards tuberonic acid ß-D-glucoside in rice (Oryza sativa L.). The expression of OsTAGG2 is upregulated by wounding and by methyl jasmonate, suggesting that this isozyme is involved in responses to biotic stresses and wounding, but the physiological substrate of OsTAGG2 remains ambiguous. In this study, we produced recombinant OsTAGG2 in Pichia pastoris (rOsTAGG2P), and investigated its substrate specificity in detail. From 1 L of culture medium, 2.1 mg of purified recombinant enzyme was obtained by ammonium sulfate precipitation and Ni-chelating column chromatography. The specific activity of rOsTAGG2P (182 U/mg) was close to that of the native enzyme (171 U/mg), unlike recombinant OsTAGG2 produced in Escherichia coli, which had approximately 3-fold lower specific activity than the native enzyme. The optimum pH and temperature for rOsTAGG2P were pH 3.4 and 60 °C. After pH and heat treatments, the enzyme retained its original activity in a pH range of 3.4-9.8 and below 55 °C. Native OsTAGG2 and rOsTAGG2P showed 4.5-4.7-fold higher activities towards salicylic acid ß-D-glucoside, an inactive storage-form of salicylic acid, than towards tuberonic acid ß-D-glucoside (TAG), although OsTAGG2 was originally isolated from rice based on TAG-hydrolytic activity.


Subject(s)
Glucosides/metabolism , Oryza/enzymology , Salicylates/metabolism , beta-Glucosidase/metabolism , Amino Acid Sequence , Hydrogen-Ion Concentration , Hydrolysis , Molecular Sequence Data , Pichia/genetics , Substrate Specificity , Temperature , beta-Glucosidase/chemistry , beta-Glucosidase/genetics , beta-Glucosidase/isolation & purification
17.
FEBS Lett ; 587(7): 840-6, 2013 Apr 02.
Article in English | MEDLINE | ID: mdl-23462136

ABSTRACT

Enzymatic epimerization is an important modification for carbohydrates to acquire diverse functions attributable to their stereoisomers. Cellobiose 2-epimerase (CE) catalyzes interconversion between d-glucose and d-mannose residues at the reducing end of ß-1,4-linked oligosaccharides. Here, we solved the structure of Ruminococcus albus CE (RaCE). The structure of RaCE showed strong similarity to those of N-acetyl-D-glucosamine 2-epimerase and aldose-ketose isomerase YihS with a high degree of conservation of residues around the catalytic center, although sequence identity between them is low. Based on structural comparison, we found that His184 is required for RaCE activity as the third histidine added to two essential histidines in other sugar epimerases/isomerases. This finding was confirmed by mutagenesis, suggesting a new catalytic mechanism for CE involving three histidines.


Subject(s)
Bacterial Proteins/chemistry , Carbohydrate Epimerases/chemistry , Cellobiose/chemistry , Racemases and Epimerases/chemistry , Ruminococcus/enzymology , Amino Acid Sequence , Amino Acid Substitution , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biocatalysis , Carbohydrate Epimerases/genetics , Carbohydrate Epimerases/metabolism , Carrier Proteins/chemistry , Carrier Proteins/genetics , Carrier Proteins/metabolism , Catalytic Domain , Cellobiose/metabolism , Crystallography, X-Ray , Glucose/chemistry , Glucose/metabolism , Histidine/chemistry , Histidine/genetics , Histidine/metabolism , Mannose/chemistry , Mannose/metabolism , Models, Chemical , Models, Molecular , Molecular Sequence Data , Molecular Structure , Mutagenesis, Site-Directed , Protein Binding , Protein Structure, Secondary , Racemases and Epimerases/genetics , Racemases and Epimerases/metabolism , Ruminococcus/genetics , Sequence Homology, Amino Acid , Substrate Specificity
18.
Biosci Biotechnol Biochem ; 77(1): 189-93, 2013.
Article in English | MEDLINE | ID: mdl-23291764

ABSTRACT

Cellobiose 2-epimerase (CE), found mainly in anaerobes, reversibly converts D-glucose residues at the reducing end of ß-1,4-linked oligosaccharides to D-mannose residues. In this study, we characterized CE-like proteins from various aerobes (Flavobacterium johnsoniae NBRC 14942, Pedobacter heparinus NBRC 12017, Dyadobacter fermentans ATCC 700827, Herpetosiphon aurantiacus ATCC 23779, Saccharophagus degradans ATCC 43961, Spirosoma linguale ATCC 33905, and Teredinibacter turnerae ATCC 39867), because aerobes, more easily cultured on a large scale than anaerobes, are applicable in industrial processes. The recombinant CE-like proteins produced in Escherichia coli catalyzed epimerization at the C2 position of cellobiose, lactose, epilactose, and ß-1,4-mannobiose, whereas N-acetyl-D-glucosamine, N-acetyl-D-mannosamine, D-glucose, and D-mannose were inert as substrates. All the CEs, except for P. heparinus CE, the optimum pH of which was 6.3, showed highest activity at weakly alkaline pH. CEs from D. fermentans, H. aurantiacus, and S. linguale showed higher optimum temperatures and thermostability than the other enzymes analyzed. The enzymes from D. fermentans, S. linguale, and T. turnerae showed significantly high k(cat) and K(m) values towards cellobiose and lactose. Especially, T. turnerae CE showed a very high k(cat) value towards lactose, an attractive property for the industrial production of epilactose, which is carried out at high substrate concentrations.


Subject(s)
Bacteria, Aerobic/enzymology , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Carbohydrate Epimerases/isolation & purification , Carbohydrate Epimerases/metabolism , Cellobiose/metabolism , Aerobiosis , Bacteria, Aerobic/chemistry , Bacterial Proteins/classification , Carbohydrate Epimerases/classification , Enzyme Assays , Enzyme Stability , Escherichia coli/genetics , Glucose/metabolism , Hydrogen-Ion Concentration , Isoenzymes/classification , Isoenzymes/isolation & purification , Isoenzymes/metabolism , Kinetics , Lactose/metabolism , Mannose/metabolism , Phylogeny , Recombinant Proteins/classification , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Species Specificity , Stereoisomerism , Substrate Specificity , Temperature
19.
J Biol Chem ; 287(50): 42389-99, 2012 Dec 07.
Article in English | MEDLINE | ID: mdl-23093406

ABSTRACT

Ruminococcus albus is a typical ruminal bacterium digesting cellulose and hemicellulose. Cellobiose 2-epimerase (CE; EC 5.1.3.11), which converts cellobiose to 4-O-ß-D-glucosyl-D-mannose, is a particularly unique enzyme in R. albus, but its physiological function is unclear. Recently, a new metabolic pathway of mannan involving CE was postulated for another CE-producing bacterium, Bacteroides fragilis. In this pathway, ß-1,4-mannobiose is epimerized to 4-O-ß-D-mannosyl-D-glucose (Man-Glc) by CE, and Man-Glc is phosphorolyzed to α-D-mannosyl 1-phosphate (Man1P) and D-glucose by Man-Glc phosphorylase (MP; EC 2.4.1.281). Ruminococcus albus NE1 showed intracellular MP activity, and two MP isozymes, RaMP1 and RaMP2, were obtained from the cell-free extract. These enzymes were highly specific for the mannosyl residue at the non-reducing end of the substrate and catalyzed the phosphorolysis and synthesis of Man-Glc through a sequential Bi Bi mechanism. In a synthetic reaction, RaMP1 showed high activity only toward D-glucose and 6-deoxy-D-glucose in the presence of Man1P, whereas RaMP2 showed acceptor specificity significantly different from RaMP1. RaMP2 acted on D-glucose derivatives at the C2- and C3-positions, including deoxy- and deoxyfluoro-analogues and epimers, but not on those substituted at the C6-position. Furthermore, RaMP2 had high synthetic activity toward the following oligosaccharides: ß-linked glucobioses, maltose, N,N'-diacetylchitobiose, and ß-1,4-mannooligosaccharides. Particularly, ß-1,4-mannooligosaccharides served as significantly better acceptor substrates for RaMP2 than D-glucose. In the phosphorolytic reactions, RaMP2 had weak activity toward ß-1,4-mannobiose but efficiently degraded ß-1,4-mannooligosaccharides longer than ß-1,4-mannobiose. Consequently, RaMP2 is thought to catalyze the phosphorolysis of ß-1,4-mannooligosaccharides longer than ß-1,4-mannobiose to produce Man1P and ß-1,4-mannobiose.


Subject(s)
Bacterial Proteins/metabolism , Carbohydrate Epimerases/metabolism , Phosphorylases/metabolism , Ruminococcus/enzymology , Bacterial Proteins/chemistry , Bacteroides fragilis/enzymology , Carbohydrate Epimerases/chemistry , Cell-Free System/enzymology , Isoenzymes/chemistry , Isoenzymes/metabolism , Mannans/chemistry , Mannans/metabolism , Phosphorylases/chemistry
20.
Biosci Biotechnol Biochem ; 76(8): 1584-7, 2012.
Article in English | MEDLINE | ID: mdl-22878201

ABSTRACT

Cellobiose 2-epimerase (CE) efficiently forms epilactose which has several beneficial biological functions. A thermostable CE from Rhodothermus marinus was immobilized on Duolite A568 and packed into a column. Lactose (100 g/L) was supplied to the reactor, kept at 50 °C at a space velocity of 8 h(-1). The epilactose concentration of the resulting eluate was 30 g/L, and this was maintained for 13 d.


Subject(s)
Bacterial Proteins/chemistry , Disaccharides/chemical synthesis , Immobilized Proteins/chemistry , Racemases and Epimerases/chemistry , Rhodothermus/enzymology , Bacterial Proteins/genetics , Biocatalysis , Bioreactors , Cellobiose/chemistry , Enzyme Stability , Escherichia coli/genetics , Hot Temperature , Hydrogen-Ion Concentration , Immobilized Proteins/genetics , Kinetics , Lactose/chemistry , Racemases and Epimerases/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Rhodothermus/chemistry , Substrate Specificity
SELECTION OF CITATIONS
SEARCH DETAIL