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1.
Chemistry ; : e202401625, 2024 May 08.
Article in English | MEDLINE | ID: mdl-38717117

ABSTRACT

Optical chirality sensing has gained significant attention in recent years. Within this field, the quest for stereodynamic chiroptical probes capable of detecting cryptochiral guests presents a formidable challenge. Macrocycles exhibiting planar chirality have emerged as promising candidates for amplifying the chirality of cryptochiral guests. In this study, we demonstrate that the formation of host-guest complexes between cryptochiral molecules and planar chiral prismarenes triggers electronic circular dichroism (ECD) signals via host-guest complexation-induced chirality amplification. The absolute configuration of the most stable chiral macrocyclic host-guest complex has been established by resorting to both exciton model and DFT computations. Furthermore, we demonstrated that this supramolecular chirality sensing system can be employed to determine the enantiomeric composition of scalemic mixtures by measuring the ECD bands intensity. The information described here opens the way for the use of prismarenes as stereodynamic probes for sensing of cryptochiral guests.

2.
Chemphyschem ; : e202400342, 2024 May 29.
Article in English | MEDLINE | ID: mdl-38807571

ABSTRACT

Some years ago, Jishan Wu reported the synthesis of 8MC and 10MC, two homologues of the cyclopenta-ring-fused oligo(m-phenylene) macrocycles mMC, each behaving as an annulene-within-an-annulene (AWA). This was a surprising result as the AWA behavior is rare. Both molecules have a partial polyradical character, enforced by the quest for restoring some aromatic character of benzene rings. However, that restoration brings back some coupling between the two annulenes. Indeed, we found that the geometry and the magnetically induced currents indicate that, while 8MC does have an AWA character, this is not the case of the larger 10MC. Limitations of the design strategy of AWA molecules should be taken into account in future attempts to prepare novel large coronenes.

3.
Chemphyschem ; : e202400203, 2024 May 15.
Article in English | MEDLINE | ID: mdl-38747090

ABSTRACT

A time-dependent method has been developed to solve the standard response equation for the calculation of dynamic molecular property densities, endowed with the characteristic of being origin-invariant, entirely in the atomic orbital basis at both HF and DFT level of theory. The method has been tuned in particular for the calculation of origin-independent electric dipole polarizability density and specific rotation power density. Some demonstrations are given for the hexabenzocoronene molecule and the Tröger's base.

4.
Chemistry ; : e202401167, 2024 Apr 24.
Article in English | MEDLINE | ID: mdl-38656896

ABSTRACT

Some planar and non-planar clarenes have been studied using maps of magnetically induced quantum-mechanical current density and tools from differential topology to assess their magnetic response in connection with recent results by Du and Wang. Bond current strengths have been computed to estimate quantitative measures. Isosurfaces of the divergence of induced Lorentz force density have been shown to provide useful additional criteria, especially in the case of non-planar clarenes.

5.
Phys Chem Chem Phys ; 25(37): 25082-25093, 2023 Sep 27.
Article in English | MEDLINE | ID: mdl-37702204

ABSTRACT

The interaction of a molecule with optical fields is customarily interpreted by means of induced time-dependent electric polarizabilities, magnetizabilities and mixed electric-magnetic polarizabilities. In general, these properties can be rationalized by integrals of density functions formulated in terms of induced charge and current densities. In this perspective, we focus on what has been done so far at the theoretical level, and on what can be expected to be unveiled from the topological study of suitable density functions, endowed with the fundamental requirement of origin invariance. Densities characterized by such a property can be integrated all over the configuration space to obtain electric dipole polarizability and optical rotatory power. Corresponding maps visualize domains mainly involved in the molecular response. The diagonal components of origin-independent density tensor functions that, on integration, yield corresponding electric dipole polarizability tensor of benzene, naphthalene, phenanthrene and ovalene, have been computed, confirming the ubiquitous presence of counter-polarization regions in the proximity of the atomic nuclei. They are associated with toroidal electron currents, induced by time derivative of the electric field of impinging radiation. Electron (de)localization in these systems is readily observed and estimated. The optical rotation density of the carbonyl chromophore is studied in detail. Its essential feature is the separation in quadrants of alternating sign of density about the CO bond. The presence of an extrachromophoric perturbation determines asymmetry in the extension of the quadrant distribution, thus causing optical rotation.

7.
J Am Chem Soc ; 145(16): 8939-8946, 2023 Apr 26.
Article in English | MEDLINE | ID: mdl-37042937

ABSTRACT

Cycloparaphenylenes (CPPs) and carbon nanobelts (CNBs) represent some of the most iconic cyclic molecular nanocarbons in recent chemistry owing to their unique properties derived from rigid, strained, and cyclic π-conjugated systems. In the last decade, the synthesis of various sizes of CPPs and CNBs has been achieved that allowed not only for investigating their size-dependent properties and strategically using such properties in various applications but also understanding the fundamental features of cyclic π-conjugated systems and molecular nanocarbons in general. Herein, we report on the synthesis, size-dependent properties, and paratropic belt currents of methylene-bridged [n]cycloparaphenylenes ([n]MCPP, n = 6, 8, 10). [8]MCPP and [10]MCPP were synthesized by the same strategy we developed for [6]MCPP synthesis. With readily available ethoxy-substituted pillar[8]arene and pillar[10]arene as precursors, [8]MCPP and [10]MCPP were successfully synthesized in three steps consisting of de-ethylation, triflation, and nickel-mediated aryl-aryl coupling. The structural and electronic properties of MCPPs were investigated by nuclear magnetic resonance analyses, absorption/fluorescence measurements, X-ray crystallographic analyses, and computational studies, revealing their interesting size-dependent properties. The differences in the size dependency between MCPPs and CPPs reflect the belt-form features of MCPPs, namely, methylene-bridging effects on MCPPs. Moreover, an interesting paratropic belt current along the MCPP backbone has been uncovered both experimentally and theoretically. The 1H NMR chemical shifts of MCPPs confirmed the presence of a paratropic belt current, whose strength rapidly decreases with increasing nanobelt size.

8.
J Phys Chem A ; 127(13): 3036-3047, 2023 Apr 06.
Article in English | MEDLINE | ID: mdl-36951918

ABSTRACT

The origin-independent magnetically induced CTOCD-GRRO and -GPRO (after continuous transformation of the origin of the current density-gradient of ρ and gradient of a power of ρ) current densities are shown to vary linearly with respect to their own defining α and ß parameters. The same is reflected in the connected magnetic properties, in particular the magnetic shielding. This is exploited to find values for α and ß that, using small basis sets, provide isotropic nuclear magnetic shieldings matching an accurate prediction, chosen as the complete basis set limit. An application to the 20 naturally occurring amino acids shows that different nuclei require different values of the parameters, which have been determined at the BHandHLYP/6-31+G(d,p) level with or without consideration of diversified chemical environments. Using CTOCD-GRRO and -GPRO methods, equipped with the optimized parameters at this low-cost level of calculation, 1H, 13C, 15N, and 17O magnetic shielding constants in glutathione, ophthalmic acid, and thyrotropin-releasing hormone are predicted with nearly the same accuracy as that of much more expensive calculations.

9.
Molecules ; 27(16)2022 Aug 11.
Article in English | MEDLINE | ID: mdl-36014353

ABSTRACT

A novel α-tetrazole-substituted 1,1'-binaphthylazepine chiral catalyst has been synthesized and its absolute configuration has been determined by DFT computational analysis of the vibrational circular dichroism (VCD) spectrum of its precursor. The VCD analysis, carried out through the model averaging method, allowed to assign the absolute configuration of a benzylic stereocenter in the presence of a chiral binaphthyl moiety. The 1,1'-binaphthylazepine tetrazole and the nitrile its immediate synthetic precursor, have been preliminarily tested as chiral organocatalysts in the asymmetric intramolecular oxa-Michael cyclization of 2-hydroxy chalcones for the synthesis of chiral flavanones obtaining low enantioselectivity.


Subject(s)
Tetrazoles , Circular Dichroism , Molecular Conformation , Stereoisomerism
10.
Chemphyschem ; 23(20): e202200411, 2022 10 19.
Article in English | MEDLINE | ID: mdl-35811448

ABSTRACT

The JAP model (after Jirásek, Anderson, and Peeks) to retrieve global current strengths from experimental 1 H chemical shifts has been tested with DFT computations. Both global and local tropicities are correctly predicted in most cases and the quantitative agreement is overall fair. An extension of the model is found to give improvement in an exemplary critical case, where the global delocalized current is negligible and the current density map is dominated by local currents.

11.
J Phys Chem A ; 126(23): 3717-3723, 2022 Jun 16.
Article in English | MEDLINE | ID: mdl-35666105

ABSTRACT

The origin-independent current density induced by a perpendicular magnetic field in the infinitene molecule has been calculated, confirming the recently presented result by Orozco-Ic et al. ( Phys. Chem. Chem. Phys. 2022, 24, 6404-6409) of two disjointed global current pathways along the edges formed by 24 carbon atoms having the form of the infinity symbol. The current strength has been assessed along the C-C bonds forming the two separate circuits, whose particular shape provides a diamagnetic exaltation which is only 73% of the expected value for this aromatic molecule. Through space currents have been found along the bond paths determined by the electron density gradient, whose strength is 10% that of the aromatic benzene ring current. It is shown that the pair of high-field 1H NMR experimental signals carry the signature of the two global currents, which are counterrotating inside the fjord regions with respect to the rim of the coronene subunits.

12.
J Chem Phys ; 156(15): 154105, 2022 Apr 21.
Article in English | MEDLINE | ID: mdl-35459313

ABSTRACT

The electronic current density, induced in a molecule by the optical magnetic field associated with a frequency-dependent monochromatic plane wave, assumed to be spatially uniform within the electric quadrupole approximation, has been studied by using a theoretical method based on a continuous translation of its origin. The induced electronic current density vector field designated by this procedure, invariant of the origin for any point of the molecular domain, is obtained via a computational scheme, formally annihilating the diamagnetic contribution of the conventional common-origin approach based on perturbation theory. In a preliminary application of the theoretical methods outlined in the present work, the simple molecule of lithium hydride has been investigated. Particular attention has been paid to the structure of induced electronic current density for several values of the magnetic field frequency by investigating equilibrium points of four different types, organized in stagnation lines, which constitute its stagnation graph, i.e., a topological fingerprint of the vector field conveying complete information in the condensed form, to verify the fulfillment of fundamental requirements, e.g., the continuity equation and the Poincaré-Hopf theorem on spherical and toroidal surfaces.

13.
Chem Commun (Camb) ; 58(34): 5253-5256, 2022 Apr 26.
Article in English | MEDLINE | ID: mdl-35388839

ABSTRACT

Enantiomorphic right- and left-handed polyproline type I helices in four cyclic dodecapeptoids with methoxyethyl and propargyl side chains are observed for the first time by single crystal X-ray diffraction. The peculiar absence of NH⋯OC hydrogen bonds in peptoids unveils the role of intramolecular backbone-to-backbone CO⋯CO interactions and CH⋯OC hydrogen bonds in the stabilization of the macrocycle conformation. Moreover, intramolecular backbone-side chain C5 CH⋯OC hydrogen bonds emerge as a stabilizing factor.


Subject(s)
Peptoids , Crystallography, X-Ray , Hydrogen Bonding , Models, Molecular , Peptoids/chemistry , Protein Structure, Secondary
14.
ACS Omega ; 7(10): 8808-8818, 2022 Mar 15.
Article in English | MEDLINE | ID: mdl-35309475

ABSTRACT

1,4-Conjugate addition of ((chloromethyl)sulfonyl)benzenes to arylideneisoxazol-5-ones, followed by one-pot, N-selective trapping in the presence of electrophiles, was investigated. This strategy led to the synthesis of new, stable N-protected isoxazol-5-ones in good yields and high diastereolectivity. The study of the reactivity of obtained products in the presence of the Mo(CO)6/H2O system allowed the development of a cascade reaction leading to novel methyl ketones in high yields and unchanged dr bearing an uncommon chloromethinearylsulfonyl end group.

15.
J Chem Phys ; 156(5): 054106, 2022 Feb 07.
Article in English | MEDLINE | ID: mdl-35135291

ABSTRACT

The continuous search for metamaterials with special properties, suitable for new technological applications, is presently being driven by a preceding theoretical development, which took place after the introduction of new physical entities, anapole and a family of toroidal multipoles, having a border in common with those considered in the more familiar electric and magnetic multipole expansions. The related concept of toroidization, i.e., toroidal moment per unit volume, has been advocated in analogy to electric polarization and magnetization operated by electromagnetic fields and should be considered on the same footing regarding its relevance and practicality for understanding certain properties, e.g., ferrotoroidicity in condensed matter physics, and for rationalizing the behavior of charge-current distributions that neither radiate nor interact with external fields in classical and quantum electrodynamics. Toroidizability, i.e., the ability of sustaining toroidal moments, can also be defined by an analogy with electric polarizability and magnetizability. The present study shows that such a property is general and characterizes atoms and molecules and that the optical electric field of a light beam induces an oscillating anapole moment, i.e., the superposition of toroidal moment with an electric dipole moment. However, values of anapole polarizabilities induced by monochromatic light, estimated by time-dependent perturbation theory for rare gas atoms and a few molecules, are quite small and possibly hard to detect experimentally.

16.
Polymers (Basel) ; 15(1)2022 Dec 30.
Article in English | MEDLINE | ID: mdl-36616527

ABSTRACT

Benzoic acid (BA) and its derivatives are very attractive because of their pharmacological properties, such as antioxidant, radical-regulating, antiviral, antitumor, anti-inflammatory, antimicrobial and antifungal. Syndiotactic polystyrene (sPS) and poly(2,6-dimethyl-1,4-phenylene)oxide (PPO) films exhibiting co-crystalline phases with BA were prepared and characterized by WAXD, FTIR and polarized FTIR measurements. The FTIR measurements clearly showed that BA was present mainly as a dimer in the crystalline channels of the ε form of sPS as well as in the α form of PPO, as generally occurs not only in the solid state but also in organic dilute solutions. BA was instead present as isolated molecules in the crystalline cavities of the δ form of sPS. In fact, the FTIR spectra of BA guest molecules exhibited vibrational peaks close to those of BA in its vapor phase. Hence, the nanoporous-crystalline δ form of sPS not only avoids additive aggregation but also leads to the separation of dimeric molecules and the segregation of monomeric BA.

17.
Polymers (Basel) ; 13(19)2021 Sep 29.
Article in English | MEDLINE | ID: mdl-34641146

ABSTRACT

Delta (δ) and epsilon (ε) co-crystalline forms of syndiotactic polystyrene with a carboxylic acid guest were obtained by sorption of liquid hexanoic acid in syndiotactic polystyrene films exhibiting delta and epsilon nanoporous-crystalline forms. The characterization study is facilitated by axially stretched syndiotactic polystyrene films, used both for polarized FTIR spectra and for WAXD fiber patterns. Particularly informative are two carbonyl-stretching FTIR peaks, attributed to monomeric and dimeric hexanoic acid. The dichroism of these carbonyl peaks indicates that both delta and epsilon phases are able to include hexanoic acid as isolated guest molecules, while only the epsilon phase is also able to include dimeric hexanoic acid molecules in its crystalline channels. The inclusion of both isolated and dimeric hexanoic acid species in the epsilon form crystalline channels produces extremely fast hexanoic acid uptakes by syndiotactic polystyrene epsilon form films.

18.
J Org Chem ; 86(21): 15128-15138, 2021 11 05.
Article in English | MEDLINE | ID: mdl-34613731

ABSTRACT

Cascade reactions of ortho-carbonyl-substituted benzonitriles with ((chloromethyl)sulfonyl)benzenes as pronucleophiles led to new isoindolin-1-ones with a tetrasubstituted C-3 position or to (Z)-3-(sulfonyl-methylene)isoindolin-1-ones. The reactions start from readily available materials, are carried out under mild conditions, and do not require metal catalysis. Promoted only by the cheap and environmentally benign K2CO3 as the base, up to six elemental steps can be combined in a single pot. Hence, a sequential one-pot cascade/ß-elimination/alkylation furnished useful intermediates for the synthesis of aristolactam natural products. The observed selectivity and the mechanism were investigated by DFT studies.


Subject(s)
Cyclization , Alkylation , Catalysis
19.
J Phys Chem Lett ; 12(36): 8855-8864, 2021 Sep 16.
Article in English | MEDLINE | ID: mdl-34495665

ABSTRACT

The notion of the electric dipole polarizability density function of atoms and molecules has been considered. The current density induced by the time derivative of the electric field of monochromatic light allows for a new definition of the electric dipole polarizability density, which is translationally invariant. This translational invariance provides the physical meaning that was lacking in previous defined polarizability densities. The new polarizability density has been implemented at the TD-DFT level of theory. The origin independence has been proven in silico to hold regardless of the basis set size. Two emblematic molecules, i.e., CO and N2, which in many respects display similar electric response, have been studied in detail. The substantial differences, which have been highlighted in the topology of the parallel and perpendicular polarizability density tensor components of CO and N2, are grossly hidden by compensation, when integration is carried out to get the molecular properties.

20.
Phys Chem Chem Phys ; 23(28): 15268-15274, 2021 Jul 21.
Article in English | MEDLINE | ID: mdl-34240095

ABSTRACT

Off-diagonal hypervirial relationships, combined with quantum mechanical sum rules of charge-current conservation, offer a way to test electronic excited-state transition energies and moments, which does not need any external reference. A number of fundamental relationships were recast into absolute deviations from zero, which have been used to assess the performance of some popular DFT functionals. Extended TD-DFT calculations have been carried out for a pool of molecules chosen for this purpose, adopting a large basis set to ensure high quality results. A partial agreement with previous benchmarks is observed.

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