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J Mol Model ; 28(10): 319, 2022 Sep 16.
Article in English | MEDLINE | ID: mdl-36109366

ABSTRACT

Human parainfluenza viruses (HPIVs) are ( -)ssRNA viruses belonging to Paramyoviridaie family. They are one of the leading causes of mortality in infants and young children and can cause ailments like croup, bronchitis, and pneumonia. Currently, no antiviral medications or vaccines are available to effectively treat parainfluenza. This necessitates the search for a novel and effective treatment. Computer-aided drug design (CADD) methodology can be utilized to discover target-based inhibitors with high accuracy in less time. A library of 45 phytocompounds with immunomodulatory properties was prepared. Thereafter, molecular docking studies were conducted to characterize the binding behavior of ligand in the binding pocket of HPIV3 HN protein. The physicochemical properties for screened compounds were computed, and the top hits from docking studies were further analyzed and validated using molecular dynamics simulation studies using the Desmond module of Schrodinger Suite 2021-1, followed by MM/GBSA analysis. The compounds CID:72276 (1) and CID:107905 (2) emerged as lead compounds of our in silico investigation. Further in vitro studies will be required to prove the efficacy of lead compounds as inhibitors and to determine the exact mechanism of their inhibition. Computational studies predict three natural flavonoids to inhibit the HN protein of HPIV3.


Subject(s)
Catechin , Paramyxoviridae Infections , Catechin/pharmacology , Catechin/therapeutic use , Child , Child, Preschool , HN Protein/chemistry , HN Protein/genetics , HN Protein/metabolism , Hemagglutinins/pharmacology , Hemagglutinins/therapeutic use , Humans , Ligands , Molecular Docking Simulation , Neuraminidase , Parainfluenza Virus 1, Human/metabolism , Parainfluenza Virus 3, Human/genetics , Paramyxoviridae Infections/drug therapy , Viral Proteins
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