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1.
Nurs Ethics ; 30(2): 210-221, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36286509

ABSTRACT

Role modelling communicates a standard of behavior to another person. Silent role modelling occurs when this standard can be communicated without articulating reasons for the action; articulate role modelling occurs when it is necessary to articulate reasons in order to effectively role model the standard of behavior, and to avoid misinterpretation. Nurses are role models in virtue of the respect and admiration given to the nursing profession. As such, nurses have role model obligations. This paper examines nurses' role model obligations for healthy behaviors and pandemic precautions. Research often identifies nurses as role models for healthy behavior, despite the fact that nurses are typically no healthier than the general population. This paper argues that nurses do not have a duty to role model healthy behaviors. The ability to adopt healthy behaviors is affected by numerous personal and individual factors. For a nurse to share their struggles to adopt healthy behaviors as articulate 'imperfect' role models violates their right to privacy. By contrast, nurses do have a moral duty to role model pandemic precautions during the COVID-19 pandemic, such as correctly wearing appropriate masks, maintaining social distancing, avoiding gatherings of multiple households when pandemic precautions are not being taken, and staying up to date on vaccination. Nurses' duty to role model pandemic precautions does not involve sharing any personal information. Nurses have a duty to be silent role models when the risk of misinterpretation is low, and a duty to be articulate role models, who explicitly communicate reasons for the role modelled behavior, when necessary to ensure they are not misinterpreted. When articulate role modelling goes beyond the minimal role modelling duty, and imposes a comparative cost to the nurse, articulate role modelling is not obligatory, but supererogatory.


Subject(s)
COVID-19 , Nurse's Role , Nurses , Moral Obligations , COVID-19/epidemiology , COVID-19/prevention & control , Pandemics , Health Promotion , Physical Distancing
2.
Nurs Ethics ; 26(1): 185-194, 2019 Feb.
Article in English | MEDLINE | ID: mdl-28116963

ABSTRACT

In the United States, information about a person's criminal history is accessible with a name and date of birth. Ruth Crampton has studied nurses' care for prisoner-patients in hospital settings and found care to be perfunctory and reactive. This article examines whether it is morally permissible for nurses in hospital settings to access information about prisoner-patients' criminal histories. Nurses may argue for a right to such information based on the right to personal safety at work or the obligation to provide prisoner-patients with the care that they deserve. These two arguments are considered and rejected. It is further argued that accessing information about a prisoner-patient's criminal history violates nurses' duty to care. Care, understood through Sarah Ruddick's account as work and relationship, requires nurses to be open and unbiased in order to do their part in forming a caring relationship with patients. Knowledge of a prisoner-patient's criminal history inhibits the formation of this relationship and thus violates nurses' duty to care.


Subject(s)
Confidentiality/ethics , Ethics, Nursing , Humans , Nurse-Patient Relations/ethics , Prisons/organization & administration , Qualitative Research , United States
3.
Epigenetics ; 8(12): 1254-60, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24107773

ABSTRACT

Genetic and epigenetic alterations are essential for the initiation and progression of human cancer. We previously reported that primary human medulloblastomas showed extensive cancer-specific CpG island DNA hypermethylation in critical developmental pathways. To determine whether genetically engineered mouse models (GEMMs) of medulloblastoma have comparable epigenetic changes, we assessed genome-wide DNA methylation in three mouse models of medulloblastoma. In contrast to human samples, very few loci with cancer-specific DNA hypermethylation were detected, and in almost all cases the degree of methylation was relatively modest compared with the dense hypermethylation in the human cancers. To determine if this finding was common to other GEMMs, we examined a Burkitt lymphoma and breast cancer model and did not detect promoter CpG island DNA hypermethylation, suggesting that human cancers and at least some GEMMs are fundamentally different with respect to this epigenetic modification. These findings provide an opportunity to both better understand the mechanism of aberrant DNA methylation in human cancer and construct better GEMMs to serve as preclinical platforms for therapy development.


Subject(s)
CpG Islands , DNA Methylation/genetics , Neoplasms, Experimental/genetics , Neoplasms/genetics , Promoter Regions, Genetic , Animals , Breast Neoplasms/genetics , Burkitt Lymphoma/genetics , Cerebellar Neoplasms/genetics , Female , Humans , Medulloblastoma/genetics , Mice , Mice, Transgenic
4.
Nurs Ethics ; 18(4): 596-605, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21646323

ABSTRACT

Recent labor disputes between registered nurses and hospitals in Minnesota, California, and Pennsylvania raise moral questions about nurses' professional obligations, nurses' right to collectively bargain to preserve or improve wages, benefits, and working conditions, and patients' right to medical care. Deontology and consequentialism focus too narrowly on nurses and patients, and thus ignore the nature of the healthcare community as a system of competing interests. When considered in this context, nurses' strikes are shown to be consistent with this system of competing interests, and thus are morally permissible.


Subject(s)
Ethics, Nursing , Moral Obligations , Nursing Staff, Hospital , Strikes, Employee/ethics , Community Health Services , Humans , Patient Rights , Social Responsibility , United States
5.
PLoS Genet ; 4(7): e1000132, 2008 Jul 18.
Article in English | MEDLINE | ID: mdl-18636108

ABSTRACT

Genetic instability plays a key role in the formation of naturally occurring cancer. The formation of long DNA palindromes is a rate-limiting step in gene amplification, a common form of tumor-associated genetic instability. Genome-wide analysis of palindrome formation (GAPF) has detected both extensive palindrome formation and gene amplification, beginning early in tumorigenesis, in an experimental Myc-induced model tumor system in the chicken bursa of Fabricius. We determined that GAPF-detected palindromes are abundant and distributed nonrandomly throughout the genome of bursal lymphoma cells, frequently at preexisting short inverted repeats. By combining GAPF with chromatin immunoprecipitation (ChIP), we found a significant association between occupancy of gene-proximal Myc binding sites and the formation of palindromes. Numbers of palindromic loci correlate with increases in both levels of Myc over-expression and ChIP-detected occupancy of Myc binding sites in bursal cells. However, clonal analysis of chick DF-1 fibroblasts suggests that palindrome formation is a stochastic process occurring in individual cells at a small number of loci relative to much larger numbers of susceptible loci in the cell population and that the induction of palindromes is not involved in Myc-induced acute fibroblast transformation. GAPF-detected palindromes at the highly oncogenic bic/miR-155 locus in all of our preneoplastic and neoplastic bursal samples, but not in DNA from normal and other transformed cell types. This finding indicates very strong selection during bursal lymphomagenesis. Therefore, in addition to providing a platform for gene copy number change, palindromes may alter microRNA genes in a fashion that can contribute to cancer development.


Subject(s)
Bursa of Fabricius/pathology , DNA, Neoplasm/genetics , Genes, myc , Genomic Instability , Lymphoma, B-Cell/genetics , Animals , Cell Line, Transformed , Cell Line, Tumor , Cell Transformation, Neoplastic , Cell Transformation, Viral , Chickens , Chromatin Immunoprecipitation , DNA, Complementary , Gene Amplification , Genetic Vectors , Lymphoma, B-Cell/etiology , Nucleic Acid Hybridization , Oligonucleotide Array Sequence Analysis , Precancerous Conditions/genetics , Repetitive Sequences, Nucleic Acid , Retroviridae/genetics , Stochastic Processes
6.
Radiat Res ; 166(3): 519-31, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16953671

ABSTRACT

Genetic gains and losses resulting from DNA strand breakage by ionizing radiation have been demonstrated in vitro and suspected in radiation-associated thyroid cancer. We hypothesized that copy number deviations might be more prevalent, and/or occur in genomic patterns, in tumors associated with presumptive DNA strand breakage from radiation exposure than in their spontaneous counterparts. We used cDNA microarray-based comparative genome hybridization to obtain genome-wide, high-resolution copy number profiles at 14,573 genomic loci in 23 post-Chernobyl and 20 spontaneous thyroid cancers. The prevalence of DNA gains in tumors from cases in exposed individuals was two- to fourfold higher than for cases in unexposed individuals and up to 10-fold higher for the subset of recurrent gains. DNA losses for all cases were low and more prevalent in spontaneous cases. We identified unique patterns of copy variation (mostly gains) that depended on a history of radiation exposure. Exposed cases, especially the young, harbored more recurrent gains that covered more of the genome. The largest regions, spanning 1.2 to 4.9 Mbp, were located at 1p36.32-.33, 2p23.2-.3, 3p21.1-.31, 6p22.1-.2, 7q36.1, 8q24.3, 9q34.11, 9q34.3, 11p15.5, 11q13.2-12.3, 14q32.33, 16p13.3, 16p11.2, 16q21-q12.2, 17q25.1, 19p13.31-qter, 22q11.21 and 22q13.2. Copy number changes, particularly gains, in post-Chernobyl thyroid cancer are influenced by radiation exposure and age at exposure, in addition to the neoplastic process.


Subject(s)
Chernobyl Nuclear Accident , Chromosome Mapping/methods , DNA, Neoplasm/genetics , Gene Dosage/genetics , Neoplasms, Radiation-Induced/genetics , Oligonucleotide Array Sequence Analysis/methods , Thyroid Neoplasms/genetics , Adolescent , Adult , Child , Child, Preschool , DNA Mutational Analysis/methods , Female , Humans , In Situ Hybridization, Fluorescence/methods , Infant , Male , Mutation , Power Plants , Prevalence , Radioactive Hazard Release , Sequence Alignment/methods , Sequence Analysis, DNA/methods , Ukraine
7.
Subcell Biochem ; 40: 245-56, 2006.
Article in English | MEDLINE | ID: mdl-17623909

ABSTRACT

DT40 presents a unique opportunity to exploit newly available tools for chicken genomic analysis. A 13K chicken cDNA microarray representing 11447 non-overlapping ESTs has been developed. This array detects expression of 7086 DT40 genes of which_644 are over-expressed 3-fold or greater and 1585 are under-expressed 3-fold or greater relative to normal post-hatch bursal cell populations. Changes in RNA expression due to single gene alterations can be detected by expression profiling. For example, by this method, over expression of the oncogenic micro RNA bic up-regulates expression of VBP, a known regulator of Avian Leukosis Virus LTR- driven transcription with very little additional expression change, A degree of cytogenetic abnormality and instability of DT40 cells has been observed, which is characterized at the fine structure level using microarray-based comparative genome hybridization (array-CGH). The relationship between gene copy number and RNA expression levels can be assessed in the same tissue samples using the same microarray. A newly introduced technique for genome-wide analysis of palindrome formation (GAPF) detects long inverted repeats, or palindromes, which are early events in gene amplification and possibly other DNA structural change. Since both array CGH-detected copy number changes and GAPF-detected palindromes are abundant in DT40, these techniques, coupled with targeted gene deletion and replacement, may provide a powerful tool for analysis of genomic instability and its underlying genetic mechanisms.


Subject(s)
Gene Expression , Animals , B-Lymphocytes/cytology , Cell Line , Chickens , DNA, Complementary , Oligonucleotide Array Sequence Analysis
8.
Subcell Biochem ; 40: 363-71, 2006.
Article in English | MEDLINE | ID: mdl-17623922

ABSTRACT

Genome-wide assessment of DNA gains and losses can be accomplished by comparative hybridization using a variety of microarray platforms that employ oligo, cDNA, BAC and other sequences as probes. Here we describe the preparation of genomic DNA for hybridization to a set of chicken cDNA probes spotted on glass slide microarrays. Method 1 can be used to assess DNA copy-number differences between two genomes, typically an experimental genome and a normal, diploid genome. We then present a specialized application of array CGH for detecting DNA amplifications containing long, inverted repeat structures (palindromes). Method 2 describes the procedure for palindrome enrichment and the internal controls used to distinguish direct versus inverted, long repeat structures using the cDNA microarray platform.


Subject(s)
Genome , Nucleic Acid Hybridization/methods , Animals , Chickens , Oligonucleotide Array Sequence Analysis
9.
BMC Genomics ; 6: 13, 2005 Feb 04.
Article in English | MEDLINE | ID: mdl-15694003

ABSTRACT

BACKGROUND: The application of microarray technology to functional genomic analysis in the chicken has been limited by the lack of arrays containing large numbers of genes. RESULTS: We have produced cDNA arrays using chicken EST collections generated by BBSRC, University of Delaware and the Fred Hutchinson Cancer Research Center. From a total of 363,838 chicken ESTs representing 24 different adult or embryonic tissues, a set of 11,447 non-redundant ESTs were selected and added to an existing collection of clones (4,162) from immune tissues and a chicken bursal cell line (DT40). Quality control analysis indicates there are 13,007 useable features on the array, including 160 control spots. The array provides broad coverage of mRNAs expressed in many tissues; in addition, clones with expression unique to various tissues can be detected. CONCLUSIONS: A chicken multi-tissue cDNA microarray with 13,007 features is now available to academic researchers from http://genomics@fhcrc.org. Sequence information for all features on the array is in GenBank, and clones can be readily obtained. Targeted users include researchers in comparative and developmental biology, immunology, vaccine and agricultural technology. These arrays will be an important resource for the entire research community using the chicken as a model.


Subject(s)
DNA, Complementary/metabolism , Gene Expression Regulation , Oligonucleotide Array Sequence Analysis/methods , Animals , Brain/metabolism , Cell Line , Chickens , Cloning, Molecular , Cluster Analysis , Computational Biology , Databases, Genetic , Expressed Sequence Tags , Fibroblasts/metabolism , Gene Expression , Gene Expression Profiling , Gene Library , Genomics , Mice , Nucleic Acid Hybridization , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sensitivity and Specificity , Sequence Analysis, DNA
10.
Dev Comp Immunol ; 28(6): 619-34, 2004 May 17.
Article in English | MEDLINE | ID: mdl-15177115

ABSTRACT

B-cell development in the bursa of Fabricius is accompanied by extensive apoptotic cell death. Apoptosis, however, is suppressed during c-myc-induced neoplasia. The experiments described here suggest that Mtd/Bok may drive apoptosis during normal development, and that this activity is blocked during myc-induced tumorigenesis. Bursal Mtd/Bok expression increases during development, correlating with the onset of intense, spontaneous apoptosis after hatching. Two isoforms of Mtd/Bok were characterized: WT-chMtd/Bok, found predominantly in the mitochondria and a less abundant form, lacking the presumptive transmembrane domain, Mtd/Bok deltaTM, found predominantly in the cytosol. Over-expression of Mtd/Bok deltaTM in a bursal lymphoma-derived cell line, DT40, reduced mitochondrial function and sensitized DT40 cells to apoptotic stimuli, while WT-chMtd/Bok had a diminished phenotype in these cells. In contrast, retroviral transduction of bursal stem cells with WT-chMtd/Bok ablated normal stem cell function in transplantation experiments, and produced extensive apoptosis in myc-induced pre-neoplastic bursal populations, but not in tumor cells.


Subject(s)
Apoptosis/immunology , B-Lymphocytes/cytology , Bursa of Fabricius/immunology , Cell Transformation, Neoplastic/pathology , Chick Embryo/immunology , Lymphoma, B-Cell/pathology , Proto-Oncogene Proteins c-bcl-2/immunology , Amino Acid Sequence , Animals , B-Lymphocytes/immunology , Bursa of Fabricius/embryology , Cell Fractionation , Cell Line, Tumor , Cell Transformation, Neoplastic/immunology , Chick Embryo/embryology , Immunoblotting/veterinary , Lymphoma, B-Cell/embryology , Lymphoma, B-Cell/immunology , Mitochondria/immunology , Molecular Sequence Data , Protein Isoforms/immunology , Proto-Oncogene Proteins c-bcl-2/genetics , RNA/blood , RNA/genetics , Sequence Alignment , Transfection/veterinary
11.
Oncogene ; 23(25): 4413-21, 2004 May 27.
Article in English | MEDLINE | ID: mdl-15064748

ABSTRACT

Avian leukosis virus (ALV) induces bursal lymphoma in tumor-susceptible chicken strains after proviral integration within the c-myc gene, and subsequent expansion of Myc-overexpressing lymphocytes within transformed follicles. Line 6(3) strain chickens are resistant to ALV tumorigenesis, largely failing to develop Myc-transformed follicles, although they show similar levels of ALV infection and integration as lymphoma-susceptible strains. Immunohistochemical analysis determined that the transformed follicles that do arise in lymphoma-resistant birds show much lower and more variable Myc overexpression than those of susceptible birds. This reduced Myc overexpression fails to block B-cell differentiation in resistant birds, while high Myc consistently blocks development at a late embryo stage in susceptible birds. This failure of Myc to block differentiation results in a normal pattern of posthatching bursal emigration in resistant transformed follicles, while transformed follicles of susceptible birds grow rapidly due to blocked emigration. Forced Myc overexpression produces transformed follicles in resistant birds, indicating that resistant lymphocytes can tolerate high Myc expression. The coding sequence and expression of the endogenous c-myc gene is the same in resistant and susceptible birds, suggesting that genetic resistance is instead mediated by reduced ALV LTR enhancer-driven transcription in the target lymphocytes of resistant birds.


Subject(s)
Avian Leukosis Virus/physiology , Avian Leukosis/genetics , B-Lymphocytes/cytology , Genes, myc , Proto-Oncogene Proteins c-myc/physiology , Animals , Antigens, Differentiation, B-Lymphocyte/physiology , Avian Leukosis Virus/genetics , Bursa of Fabricius/pathology , Cell Differentiation , Cell Transformation, Viral , Chick Embryo , Chickens , Enhancer Elements, Genetic , Gene Expression Regulation, Neoplastic , Gene Expression Regulation, Viral , Genetic Predisposition to Disease , Proviruses/genetics , Terminal Repeat Sequences , Virus Integration
12.
Oncogene ; 23(13): 2357-66, 2004 Mar 25.
Article in English | MEDLINE | ID: mdl-14691447

ABSTRACT

We have used chicken cDNA microarrays to investigate gene-expression changes induced during transformation of chick embryo fibroblasts (CEF) by the viral Jun oncoprotein encoded by ASV17. This analysis reveals that v-Jun induces increases and decreases of varying magnitude in the expression of genes involved in diverse cellular functions, most of which have not been detected in previous screens for putative v-Jun targets. In all, 27 individual genes were identified, whose expression is increased threefold or more in v-Jun-transformed cells, including genes involved in energy generation, protein synthesis, and gene transcription. Interestingly, this group includes the hypoxia-inducible factor-1 alpha (Hif-1alpha) transcription factor and the glycolytic enzyme enolase, suggesting that adaptation to hypoxia could play a role in tumorigenesis by v-Jun. We also identified 32 genes whose expression is decreased threefold or more, including chaperones, components of the cytoskeleton, and, unexpectedly, DNA replication factors. The gene whose expression is upregulated most dramatically (approximately 100-fold) encodes Autotaxin (ATX), a secreted tumor motility-promoting factor with lysophospholipase D activity. Strikingly, v-Jun-transformed CEF secrete catalytically active ATX and chemotactic activity, which can be detected in conditioned medium. ATX is not detectably expressed in normal CEF or CEF transformed by the v-Src or v-Myc oncoproteins, indicating that induction of this putative autocrine/paracrine factor is a specific consequence of cell transformation by v-Jun. ATX has been implicated in both angiogenesis and invasion, and could therefore play an important role in tumorigenesis by v-Jun in vivo.


Subject(s)
Glucose-6-Phosphate Isomerase/metabolism , Glycoproteins/metabolism , Multienzyme Complexes , Oncogene Protein p65(gag-jun)/metabolism , Phosphoric Diester Hydrolases/metabolism , Animals , Cell Transformation, Neoplastic/metabolism , Chick Embryo , Down-Regulation , Oligonucleotide Array Sequence Analysis , Phosphodiesterase I , Pyrophosphatases , Up-Regulation
13.
J Virol ; 77(17): 9378-87, 2003 Sep.
Article in English | MEDLINE | ID: mdl-12915553

ABSTRACT

The avian leukosis virus DeltaLR-9 causes a high frequency of B-cell lymphomas within weeks after injection into 10-day-old chicken embryos. These lymphomas result from proviral integrations into the oncogene c-myb. In contrast, LR-9, which lacks the 42-nucleotide gag gene deletion of DeltaLR-9, does not cause a high frequency of c-myb-associated short-latency lymphomas. Although viral replication rates and spliced env mRNA levels were found to be similar for both viruses, DeltaLR-9 exhibited an increase in readthrough transcription compared to LR-9. The DeltaLR-9 deletion is located in the region of the gag gene corresponding to the matrix (MA) protein as well as in the negative regulator of splicing (NRS) element. To test whether disruption of the NRS or of the MA protein was responsible for inducing short-latency lymphomas, we generated viruses with NRS point mutations that maintained the wild-type Gag amino acid sequence. One of the mutant viruses induced an even higher incidence than DeltaLR-9 of short-latency lymphomas with viral integrations into c-myb. Thus, we propose that disruption of the NRS sequence promotes readthrough transcription and splicing to the downstream myb gene, causing overexpression of a slightly truncated Myb protein, which induces short-latency tumors.


Subject(s)
Avian Leukosis Virus/genetics , Avian Leukosis Virus/pathogenicity , Avian Leukosis/etiology , Genes, myb , Lymphoma, B-Cell/etiology , Animals , Avian Leukosis/genetics , Avian Leukosis/virology , Avian Leukosis Virus/physiology , Base Sequence , Chick Embryo , DNA, Viral/genetics , Genes, env , Lymphoma, B-Cell/genetics , Lymphoma, B-Cell/virology , Oncogene Proteins v-myb/genetics , Oncogene Proteins v-myb/physiology , Point Mutation , RNA Processing, Post-Transcriptional/genetics , RNA Splicing/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA, Viral/genetics , RNA, Viral/metabolism , Sequence Deletion , Viral Matrix Proteins/genetics , Viral Matrix Proteins/physiology , Virus Integration/genetics , Virus Replication/genetics
14.
Genomics ; 82(2): 122-9, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12837263

ABSTRACT

cDNA microarray technology has been applied to the detection of DNA copy-number changes in malignant tumors. Test and control genomic DNA samples are differentially labeled and cohybridized to a spotted cDNA microarray. The ratio of test to control fluorescence intensities for each spot reflects relative gene copy number. The low signal-to-noise ratios of this assay and the variable levels of gene amplification and deletion among tumors hamper the detection of deviations from the diploid complement. We describe a regression-based statistical method to test for altered copy number on each gene and apply the technique to copy-number profiles in 10 thyroid tumors. We show that a novel transformation of fluorescence ratios into array rank order efficiently normalizes the heterogeneity among copy-number profiles and improves the reproducibility of the results. Array rank order regression analysis enhances the detection of consistent changes in gene copy number in solid tumors by cDNA microarray-based comparative genome hybridization.


Subject(s)
Gene Dosage , Neoplasms/genetics , Oligonucleotide Array Sequence Analysis , Regression Analysis , Fluorescence , Humans , Statistics, Nonparametric
15.
Oncogene ; 22(7): 1073-86, 2003 Feb 20.
Article in English | MEDLINE | ID: mdl-12592394

ABSTRACT

Avian retroviral integration into the c-myb locus is casually associated with the development of lymphomas in the bursa of Farbricius of chickens; these arise with a shorter latency than bursal lymphomas caused by deregulation of c-myc. This study indicates that c-myb mutation in embryonic bursal precursors leads to an oligoclonal population of developing bursal follicles, showing a variable propensity to form a novel lesion, the neoplastic follicle (NF). About half of such bursas rapidly developed lymphomas. Detection of changes in gene expression, during the development of neoplasms, was carried out by cDNA microarray analysis. The transcriptional signature of lymphomas with mutant c-myb was more limited than, and only partially shared with, those of bursal lymphomas caused by Myc or Rel oncogenes. The c-myb-associated lymphomas frequently showed overexpression of c-myc and altered expression of other genes involved in cell cycle control and proliferation-related signal transduction. Oligoclonal, NF-containing bursas lacked detectable c-myc overexpression and demonstrated a pattern of gene expression distinct from that of normal bursa and partially shared with the short-latency lymphomas. This functional genomic analysis uncovered several different pathways of lymphomagenesis by oncogenic transcription factors acting in a B-cell lineage.


Subject(s)
Bursa of Fabricius/pathology , Chickens/genetics , Gene Expression Regulation, Neoplastic/genetics , Genes, myb , Lymphoma/genetics , Animals , Avian Leukosis Virus/genetics , B-Lymphocytes/metabolism , B-Lymphocytes/pathology , Bursa of Fabricius/metabolism , Cell Cycle Proteins/biosynthesis , Cell Cycle Proteins/genetics , Cell Division/genetics , Chick Embryo , Defective Viruses/genetics , Gene Expression Profiling , Genes, myc , Genes, rel , Lymphoma/metabolism , Lymphoma/pathology , Neoplasm Metastasis , Neoplasm Proteins/biosynthesis , Neoplasm Proteins/genetics , Oligonucleotide Array Sequence Analysis , Phenotype , Proto-Oncogene Proteins c-myc/biosynthesis , Proto-Oncogene Proteins c-myc/genetics , Signal Transduction/genetics , Time Factors
16.
Appl Opt ; 42(3): 476-85, 2003 Jan 20.
Article in English | MEDLINE | ID: mdl-12570269

ABSTRACT

We use Fraunhofer diffraction theory and meterological data to determine the nature of cloud-particle distributions and the mean particle sizes required for interpreting photographs of coronas and iridescence in mountain wave clouds. Traditional descriptions of coronas and iridescence usually explain these optical phenomena as diffraction by droplets of liquid water. Our analysis shows that the photographed displays have mean particle sizes from 7.6 to 24.3 microm, with over half the cases requiring diffraction by small (approximatley 20 microm) quasispherical ice particles rather than liquid water droplets. Previous documentation of coronas produced by ice particles are limited to observations in cirrus clouds that appear to be composed of small ice crystals, whereas our observations suggest that coronas and iridescence quite often can be created by tiny quasispherical ice particles that might be unique to mountain wave clouds. Furthermore, we see that the dominant colors in mountain wave-cloud coronas are red and blue, rather than the traditionally described red and green.

17.
Cancer Res ; 62(1): 48-52, 2002 Jan 01.
Article in English | MEDLINE | ID: mdl-11782357

ABSTRACT

CTCF is a widely expressed 11-zinc finger (ZF) transcription factor that is involved in different aspects of gene regulation including promoter activation or repression, hormone-responsive gene silencing, methylation-dependent chromatin insulation, and genomic imprinting. Because CTCF targets include oncogenes and tumor suppressor genes, we screened over 100 human tumor samples for mutations that might disrupt CTCF activity. We did not observe any CTCF mutations leading to truncations/premature stops. Rather, in breast, prostate, and Wilms' tumors, we observed four different CTCF somatic missense mutations involving amino acids within the ZF domain. Each ZF mutation abrogated CTCF binding to a subset of target sites within the promoters/insulators of certain genes involved in regulating cell proliferation but did not alter binding to the regulatory sequences of other genes. These observations suggest that CTCF may represent a novel tumor suppressor gene that displays tumor-specific "change of function" rather than complete "loss of function."


Subject(s)
DNA, Neoplasm/genetics , DNA, Neoplasm/metabolism , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Mutation, Missense , Repressor Proteins , Transcription Factors/genetics , Transcription Factors/metabolism , Zinc Fingers/genetics , Amino Acid Sequence , Base Sequence , Breast Neoplasms/genetics , Breast Neoplasms/metabolism , CCCTC-Binding Factor , Cell Cycle Proteins/genetics , Female , Genes, Tumor Suppressor , Globins/genetics , Humans , Male , Molecular Sequence Data , Muramidase/genetics , Promoter Regions, Genetic , Prostatic Neoplasms/genetics , Prostatic Neoplasms/metabolism , Protein Conformation , Substrate Specificity , Wilms Tumor/genetics , Wilms Tumor/metabolism
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