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1.
Appl Microbiol Biotechnol ; 100(7): 3321-36, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26637425

ABSTRACT

A novel biphasic system containing mineral medium and sand coated with a biologically weathered creosote-PAH mixture was developed to specifically enrich the high molecular weight polycyclic aromatic hydrocarbon (HMW PAH)-degrading community from a creosote-polluted soil. This consortium (UBHP) removed 70% of the total HMW PAHs and their alkyl-derivatives in 12 weeks. Based on a combined culture-dependent/independent approach, including clone library analysis, detection of catabolic genes, metabolomic profiles, and characterization of bacterial isolates, 10 phylotypes corresponding to five major genera (Sphingobium, Sphingomonas, Achromobacter, Pseudomonas, and Mycobacterium) were pointed out as key players within the community. In response to exposure to different single PAHs, members of sphingomonads were associated to the utilization of phenanthrene, fluoranthene, benzo[a]anthracene, and chrysene, while the degradation of pyrene was mainly associated to low-abundance mycobacteria. In addition to them, a number of uncultured phylotypes were detected, being of special relevance a group of Gammaproteobacteria closely related to a group previously associated with pyrene degradation that were here related to benzo(a)anthracene degradation. The overall environmental relevance of these phylotypes was confirmed by pyrosequencing analysis of the microbial community shift in the creosote-polluted soil during a lab-scale biostimulation.


Subject(s)
Achromobacter/metabolism , Gammaproteobacteria/metabolism , Mycobacterium/metabolism , Polycyclic Aromatic Hydrocarbons/metabolism , Pseudomonas/metabolism , Soil Microbiology , Soil Pollutants/metabolism , Sphingomonadaceae/metabolism , Achromobacter/classification , Achromobacter/genetics , Achromobacter/isolation & purification , Anthracenes/metabolism , Biodegradation, Environmental , Gammaproteobacteria/classification , Gammaproteobacteria/genetics , Gammaproteobacteria/isolation & purification , Gene Library , High-Throughput Nucleotide Sequencing , Microbial Consortia/genetics , Mycobacterium/classification , Mycobacterium/genetics , Mycobacterium/isolation & purification , Phenanthrenes/metabolism , Phylogeny , Pseudomonas/classification , Pseudomonas/genetics , Pseudomonas/isolation & purification , Pyrenes/metabolism , Soil/chemistry , Spain , Sphingomonadaceae/classification , Sphingomonadaceae/genetics , Sphingomonadaceae/isolation & purification
2.
Biodegradation ; 25(4): 543-56, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24356981

ABSTRACT

Marine microbial consortium UBF, enriched from a beach polluted by the Prestige oil spill and highly efficient in degrading this heavy fuel, was subcultured in pyrene minimal medium. The pyrene-degrading subpopulation (UBF-Py) mineralized 31 % of pyrene without accumulation of partially oxidized intermediates indicating the cooperation of different microbial components in substrate mineralization. The microbial community composition was characterized by culture dependent and PCR based methods (PCR-DGGE and clone libraries). Molecular analyses showed a highly stable community composed by Alphaproteobacteria (84 %, Breoghania, Thalassospira, Paracoccus, and Martelella) and Actinobacteria (16 %, Gordonia). The members of Thalasosspira and Gordonia were not recovered as pure cultures, but five additional strains, not detected in the molecular analysis, that classified within the genera Novosphingobium, Sphingopyxis, Aurantimonas (Alphaproteobacteria), Alcanivorax (Gammaproteobacteria) and Micrococcus (Actinobacteria), were isolated. None of the isolates degraded pyrene or other PAHs in pure culture. PCR amplification of Gram-positive and Gram-negative dioxygenase genes did not produce results with any of the cultured strains. However, sequences related to the NidA3 pyrene dioxygenase present in mycobacterial strains were detected in UBF-Py consortium, suggesting the representative of Gordonia as the key pyrene degrader, which is consistent with a preeminent role of actinobacteria in pyrene removal in coastal environments affected by marine oil spills.


Subject(s)
Dioxygenases/genetics , Genes, Bacterial , Microbial Consortia/genetics , Polycyclic Aromatic Hydrocarbons/metabolism , Pyrenes/metabolism , Seawater/microbiology , Bacteria/genetics , Bacteria/isolation & purification , Bacteria/metabolism , Biodegradation, Environmental , Denaturing Gradient Gel Electrophoresis , Heterotrophic Processes , Hydroxylation , Molecular Sequence Data , Phenanthrenes/metabolism , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
3.
PLoS One ; 6(1): e16503, 2011 Jan 26.
Article in English | MEDLINE | ID: mdl-21298069

ABSTRACT

African horse sickness (AHS) is a lethal viral disease of equids, which is transmitted by Culicoides midges that become infected after biting a viraemic host. The use of live attenuated vaccines has been vital for the control of this disease in endemic regions. However, there are safety concerns over their use in non-endemic countries. Research efforts over the last two decades have therefore focused on developing alternative vaccines based on recombinant baculovirus or live viral vectors expressing structural components of the AHS virion. However, ethical and financial considerations, relating to the use of infected horses in high biosecurity installations, have made progress very slow. We have therefore assessed the potential of an experimental mouse-model for AHSV infection for vaccine and immunology research. We initially characterised AHSV infection in this model, then tested the protective efficacy of a recombinant vaccine based on modified vaccinia Ankara expressing AHS-4 VP2 (MVA-VP2).


Subject(s)
African Horse Sickness Virus/genetics , African Horse Sickness/prevention & control , Capsid Proteins/therapeutic use , Genetic Vectors/therapeutic use , Receptor, Interferon alpha-beta/genetics , Vaccinia virus/genetics , African Horse Sickness/therapy , African Horse Sickness Virus/immunology , Animals , Capsid Proteins/genetics , Disease Models, Animal , Horses , Mice , Receptor, Interferon alpha-beta/deficiency , Vaccines, Synthetic
4.
J Gen Virol ; 91(Pt 11): 2821-5, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20719994

ABSTRACT

The identification of transmission routes for bluetongue virus (BTV) is essential to improve the control of the disease. Although BTV is primarily transmitted by several species of Culicoides biting midges, there has been evidence of transplacental and oral transmission. We now report that IFNAR((-/-)) mice are susceptible to oral infection by BTV-8. Viraemia, clinical manifestations and tissue lesions are similar to those in intravenously infected mice. In addition, we show that the oral cavity and oesophagus are susceptible to BTV infection and replication, suggesting that these organs are possible entry routes during BTV oral infection.


Subject(s)
Bluetongue virus/pathogenicity , Bluetongue/pathology , Bluetongue/virology , Disease Models, Animal , Receptor, Interferon alpha-beta/deficiency , Animal Structures/pathology , Animal Structures/virology , Animals , Female , Histocytochemistry , Male , Mice , Microscopy , Sheep , Survival Analysis , Viral Load , Viremia
5.
Acta Vet Scand ; 51: 20, 2009 Apr 30.
Article in English | MEDLINE | ID: mdl-19405946

ABSTRACT

A dog presented with cutaneous nodules, enlarged lymph nodes and oedema in limbs, face and abdomen. The diagnosis of visceral leishmaniasis was established by identification of Leishmania amastigotes within macrophages from skin and popliteal lymph node biopsies. At necropsy, lesions were found in different organs, but it was particularly striking to observe large areas of pallor in the myocardium. Histological examination revealed an intense chronic inflammatory reaction in many organs, and numerous macrophages were found to contain amastigote forms of Leishmania. The inflammatory reaction was especially severe in the heart, where large areas of the myocardium appeared infiltrated with huge numbers of mononuclear immune cells, causing cardiac muscle atrophy and degeneration. Despite the severe inflammation, the number of parasitized macrophages was low in the myocardium, as revealed by immunohistochemical staining of Leishmania amastigotes. Because cardiac involvement is not usually described in this condition, this dog represents a very rare case of canine visceral leishmaniasis with affection of the myocardium.


Subject(s)
Dog Diseases/parasitology , Heart Diseases/veterinary , Leishmania infantum/growth & development , Leishmaniasis, Visceral/veterinary , Animals , Dogs , Fatal Outcome , Female , Heart Diseases/parasitology , Leishmaniasis, Visceral/parasitology
6.
Vet Immunol Immunopathol ; 124(3-4): 264-73, 2008 Aug 15.
Article in English | MEDLINE | ID: mdl-18490062

ABSTRACT

Pseudorabies virus (PRV) is an alphaherpesvirus that causes a neurological disease in many wild and domestic animals. The neuropathology elicited by PRV is quite consistent regardless of the host with the only exception of mink, in which it is characterized by a vasculopathy rather than by an encephalitis. In this study, we aimed to investigate the underlying pathogenic mechanism(s) of PRV infection in mink by using immunohistochemistry and laser capture microdissection (LCM) on material from naturally and experimentally infected animals. The inflammatory reaction induced by PRV was minimal or absent not only in the nervous system, where we identified a low number of macrophages and a few T lymphocytes, but also in the primary replication site, the oropharyngeal mucosa; however, the number of PRV-infected cells detected by immunohistochemistry was extremely high both in the peripheral mucosa and in the nervous tissue. On the other hand, the vascular pathology included parenchymal hemorrhages of various degrees and, in specific cortical areas of the brain, fibrinoid degeneration of the capillary walls. Detection of viral antigens by immunohistochemistry revealed infection of endothelial cells of capillaries situated both in the oropharyngeal mucosa and in the brain stem; the presence of PRV DNA in vessels was further demonstrated by PCR performed on LCM samples of brain capillaries. These results can be interpreted as supporting the idea that the different pathology of the disease in mink may be the consequence of an increased endotheliotropism of PRV in this species. Infection of the vessel wall may then lead to vascular pathology and impairment in endothelial cell function, resulting in a weak immune response to infection.


Subject(s)
Central Nervous System Diseases/veterinary , Herpesvirus 1, Suid/pathogenicity , Mink/virology , Pseudorabies/virology , Animals , Brain/immunology , Brain/pathology , Brain/virology , Central Nervous System Diseases/immunology , Central Nervous System Diseases/pathology , Central Nervous System Diseases/virology , DNA, Viral/chemistry , DNA, Viral/genetics , Female , Herpesvirus 1, Suid/immunology , Immunohistochemistry/veterinary , Male , Mink/immunology , Polymerase Chain Reaction/veterinary , Pseudorabies/immunology , Pseudorabies/pathology , Spinal Cord/immunology , Spinal Cord/pathology , Spinal Cord/virology
7.
Vet Microbiol ; 125(3-4): 232-43, 2007 Dec 15.
Article in English | MEDLINE | ID: mdl-17614218

ABSTRACT

Nitric oxide (NO) is a free radical gas with important roles in the host's immune response against viral infections. In this study, we examined the kinetics and distribution of nitric oxide synthase (NOS) expression during the early steps of infection of the porcine nervous system by the alphaherpesvirus pseudorabies virus (PRV). To this end, we examined changes in the expression of the three major NOS isoforms, neuronal NOS (nNOS), endothelial NOS (eNOS) and inducible NOS (iNOS), by immunohistochemistry in the trigeminal ganglia and brain of pigs inoculated intranasally with a virulent PRV strain. The results obtained show that infection of the porcine nervous system by PRV induced a rapid and progressive increment in NOS expression that coincided in timing, location, and magnitude with those of virus propagation in the nervous tissue. A major finding of this study was that PRV caused not only nNOS and iNOS induction in a variety of cell types, but also eNOS up-regulation in endothelial cells and neurons; therefore, all possible sources of NO are activated and probably contribute to the overproduction of NO during infection with the neurotropic alphaherpesvirus PRV in its natural host.


Subject(s)
Herpesvirus 1, Suid/physiology , Nervous System Diseases/veterinary , Nitric Oxide Synthase/biosynthesis , Pseudorabies/enzymology , Swine Diseases/enzymology , Swine Diseases/virology , Animals , Brain Stem/enzymology , Immunohistochemistry/veterinary , Isoenzymes , Nervous System Diseases/enzymology , Nervous System Diseases/virology , Nitric Oxide Synthase/genetics , Olfactory Bulb/enzymology , Pseudorabies/virology , Trigeminal Ganglion/enzymology , Up-Regulation
8.
Fish Shellfish Immunol ; 21(4): 467-71, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16533606

ABSTRACT

The melano-macrophage centres (MMCs) of the haemolymphopoietic organs of teleost fish trap and retain antigens and are closely associated with immunoglobulin-secreting cells. The hypothesis that they are the phylogenetic precursors of the germinal centres of higher vertebrates has been questioned due to their apparent lack of organising cells. In this study the immunoreactivity of MMC cells from spleen and kidney of the teleosts Cyprinus carpio, Odontesthes bonariensis and Solea senegalensis to CNA-42, an antibody usually employed for labelling follicular dendritic cells of higher vertebrates was investigated. Free melano-macrophages and MMCs in the spleens of all three species were labelled by the antibody. This finding adds new evidence to the hypothesis that an evolutionary relationship exists between the MMCs of fish and the germinal centres of many birds and mammals.


Subject(s)
Fishes/immunology , Macrophages/ultrastructure , Melanocytes/ultrastructure , Animals , Antigen-Antibody Complex/metabolism , Biological Evolution , Dendritic Cells, Follicular/immunology , Fishes/anatomy & histology , Immunohistochemistry/veterinary , Macrophages/immunology , Melanocytes/immunology , Spleen/immunology , Spleen/metabolism
9.
J Bacteriol ; 187(15): 5452-9, 2005 Aug.
Article in English | MEDLINE | ID: mdl-16030239

ABSTRACT

Members of the H-NS family of proteins play a relevant role as modulators of gene expression in gram-negative bacteria. Interaction of these proteins with members of the Hha/YmoA family of proteins has been previously reported. It has been hypothesized that the latter proteins are functionally equivalent to the N-terminal domain of H-NS-like proteins. In this report we test this assumption by replacing the N-terminal domain of Escherichia coli H-NS by Hha. It has been possible to obtain a functional protein that can compensate for some of the hns-induced phenotypes. These results highlight the relevance of H-NS-Hha interactions to generate heterooligomeric complexes that modulate gene expression in gram-negative bacteria.


Subject(s)
Bacterial Proteins/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/physiology , Escherichia coli Proteins/physiology , Escherichia coli/genetics , Oligopeptides/metabolism , Recombination, Genetic , Amino Acid Sequence , Bacterial Proteins/metabolism , DNA-Binding Proteins/metabolism , Dimerization , Escherichia coli/metabolism , Escherichia coli Proteins/genetics , Molecular Sequence Data , Protein Structure, Tertiary
10.
Mol Microbiol ; 54(1): 251-63, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15458420

ABSTRACT

In enteric bacteria, proteins of the Hha/YmoA family play a role in the regulation of gene expression in response to environmental factors. Interaction of both Hha and YmoA with H-NS has been reported, and an Hha/H-NS complex has been shown to modulate expression in Escherichia coli of the haemolysin operon of plasmid pHly152. In addition to the hns gene, the chromosome of E. coli and other enteric bacteria also includes the stpA gene that encodes the StpA protein, an H-NS paralogue. We report here the identification of the Hha paralogue in E. coli, the YdgT protein. As Hha paralogue, YdgT appears to fulfil some of the functions reported for StpA as H-NS paralogue: YdgT is overexpressed in hha mutants and can compensate, at least partially, some of the hha-induced phenotypes. We also demonstrate that YdgT interacts both with H-NS and with StpA. Protein cross-linking studies showed that YdgT/H-NS heteromeric complexes are generated within the bacterial cell. The StpA protein, which is subjected to Lon-mediated turnover, was less stable in the absence of Hha or YdgT. Our findings suggest that Hha, YdgT and StpA may form complexes in vivo.


Subject(s)
Bacterial Proteins/metabolism , DNA-Binding Proteins/metabolism , Escherichia coli Proteins/metabolism , Escherichia coli/metabolism , Molecular Chaperones/metabolism , Bacterial Proteins/genetics , DNA-Binding Proteins/genetics , Escherichia coli/genetics , Escherichia coli/growth & development , Escherichia coli Proteins/genetics , Gene Expression Regulation, Bacterial , Hemolysin Proteins/metabolism , Molecular Chaperones/genetics , Mutation
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