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1.
Mol Phylogenet Evol ; 179: 107667, 2023 02.
Article in English | MEDLINE | ID: mdl-36400419

ABSTRACT

Host-parasite coevolution is one of the fundamentals of evolutionary biology. Due to the intertwined evolutionary history of two interacting species and reciprocal coadaptation processes of hosts and parasites, we can expect that studying parasites will shed more light onto the evolutionary processes of their hosts. Monogenea (ectoparasitic Platyhelminthes) and their cyprinoid fish hosts represent one of the best models for studying host-parasite evolutionary relationships using a cophylogenetic approach. These parasites have developed remarkably high host specificity, where each host species often serves as a potential host for its own host-specific monogenean species. Here, the cophylogenetic relationships in the Dactylogyrus-Squalius system was investigated, as Squalius is one of several cyprinoid genera with puzzling phylogeography and inhabits all four major peri-Mediterranean peninsulas. Of 29 endemic Squalius species examined for the presence of Dactylogyrus parasites, a total of 13 Dactylogyrus species were collected from the gills of 20 Squalius species across a wide range of distribution. Phylogenetic reconstruction revealed a polyphyletic origin for Dactylogyrus species parasitizing congeneric Squalius, with four major clades being recognized. On the basis of the delimitation of host specificity, strict specialists parasitizing single host species, geographic specialists parasitizing congeners in a limited geographical region, and true generalists parasitizing congeners in various geographical regions were recognized in Dactylogyrus species parasitizing Squalius. The phylogenetic reconstruction of Squalius hosts revealed two major clades, the first encompassing only peri-Mediterranean species and the second including species from other Euro-Asian regions. Distance-based cophylogenetic methods did not reveal a statistically significant global cophylogenetic structure in the studied system; however, several host-parasite links among Iberian endemic species contributed significantly to the overall structure. The widest host range and associated genetic variability were recorded for D. folkmanovae, parasitizing nine Squalius species, and D. vistulae, parasitizing 13 Squalius species. Two different dispersion mechanisms and morphological adaptations to Squalius hosts were clearly reflected in the contrasting cophylogenetic patterns for these two species with different levels of host specificity. While host-parasite cospeciation plays an important role in diversification within D. folkmanovae, diversification within D. vistulae is driven mainly by host switching.


Subject(s)
Cyprinidae , Parasites , Platyhelminths , Trematoda , Animals , Phylogeny , Trematoda/genetics , Platyhelminths/genetics , Host-Parasite Interactions/genetics , Cyprinidae/genetics
2.
J Fish Biol ; 88(3): 1104-24, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26822387

ABSTRACT

A new species of the gobiid genus Gobius (Gobiidae, Perciformes), Gobius incognitus sp. nov. is described from the Mediterranean Sea, and its most morphologically similar species Gobius bucchichi is redescribed. The new species is distinguished from its congeners by: scales in lateral series 51-59; predorsal scales 25-35; opercle scaled in adults with 10-16 scales present; pectoral fin with ray count 18-20 and free tips on upper rays well developed and on the first ray longer than two thirds of the entire ray length; pelvic disc complete and with well-developed anterior membrane without lateral lobes; anterior oculoscapular canal with pore α at rear of orbit; oculoscapular row x(1) not extending forwards to pore ß; suborbital row d discontinuous with large gap below suborbital rows 3 and 4; eye diameter 1·08-1·32 in snout length; by pigment rows on cheek and pigmentation on pectoral-fin base.


Subject(s)
Perciformes/classification , Phylogeny , Animals , Female , Genetic Variation , Male , Mediterranean Sea , Perciformes/anatomy & histology , Perciformes/genetics , Species Specificity
3.
J Fish Biol ; 86(5): 1534-48, 2015 May.
Article in English | MEDLINE | ID: mdl-25801689

ABSTRACT

As a basis for future conservation activities, the genetic and external body morphology variability of the European mudminnow Umbra krameri, a highly endangered fish species in Serbia and in Bosnia and Herzegovina, was determined for existing populations with the use of molecular markers (mitochondrial and microsatellite DNA) and geometric morphometric methods. Mitochondrial DNA cytochrome b gene analysis revealed two previously undescribed haplotypes: Da1 (the Lugomir population from the Danube River basin) and Sa1 (the Bakreni Batar and the Gromizelj populations from the Sava River system), with a corresponding genetic distance of 0·7%. Paired values of FST and DAS distances for microsatellite marker data show that the difference between the Danube and the Sava populations is seven to nine times higher than the difference between the populations within the Sava River system. Geometric morphometric analyses also support a clear separation of the Lugomir population from the Bakreni Batar and the Gromizelj populations. The analysis of the body shape variation, however, indicates a significant difference between the two genetically indistinguishable Sava populations. The observed genetic and phenetic relationships of the analysed mudminnow populations most probably represent a consequence of historical, geographical and ecological factors. These results will offer guidelines for future protection, conservation and sustainable management of this species in the region.


Subject(s)
Genetic Variation , Umbridae/anatomy & histology , Umbridae/genetics , Animals , Bosnia and Herzegovina , Conservation of Natural Resources , Cytochromes b/genetics , DNA, Mitochondrial/genetics , Genetics, Population , Haplotypes , Microsatellite Repeats , Sequence Analysis, DNA , Serbia
4.
Mol Ecol Resour ; 14(6): 1210-21, 2014 Nov.
Article in English | MEDLINE | ID: mdl-24690331

ABSTRACT

Incomplete knowledge of biodiversity remains a stumbling block for conservation planning and even occurs within globally important Biodiversity Hotspots (BH). Although technical advances have boosted the power of molecular biodiversity assessments, the link between DNA sequences and species and the analytics to discriminate entities remain crucial. Here, we present an analysis of the first DNA barcode library for the freshwater fish fauna of the Mediterranean BH (526 spp.), with virtually complete species coverage (498 spp., 98% extant species). In order to build an identification system supporting conservation, we compared species determination by taxonomists to multiple clustering analyses of DNA barcodes for 3165 specimens. The congruence of barcode clusters with morphological determination was strongly dependent on the method of cluster delineation, but was highest with the general mixed Yule-coalescent (GMYC) model-based approach (83% of all species recovered as GMYC entity). Overall, genetic morphological discontinuities suggest the existence of up to 64 previously unrecognized candidate species. We found reduced identification accuracy when using the entire DNA-barcode database, compared with analyses on databases for individual river catchments. This scale effect has important implications for barcoding assessments and suggests that fairly simple identification pipelines provide sufficient resolution in local applications. We calculated Evolutionarily Distinct and Globally Endangered scores in order to identify candidate species for conservation priority and argue that the evolutionary content of barcode data can be used to detect priority species for future IUCN assessments. We show that large-scale barcoding inventories of complex biotas are feasible and contribute directly to the evaluation of conservation priorities.


Subject(s)
Biodiversity , DNA Barcoding, Taxonomic/methods , Fishes/classification , Fishes/genetics , Spatial Analysis , Animals , Fishes/anatomy & histology , Fresh Water , Mediterranean Region , Molecular Sequence Data , Sequence Analysis, DNA
5.
J Fish Biol ; 82(2): 703-7, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23398078

ABSTRACT

In this study, records on the occurrence of the Japanese ginbuna Carassius langsdorfii from northern Germany, north-western Italy and southern Bosnia and Herzegovina are presented. The new findings, in addition to former studies reported in the Czech Republic and Greece, show that C. langsdorfii is much more widespread in Europe than was previously believed.


Subject(s)
Cyprinidae/classification , Cyprinidae/genetics , DNA, Mitochondrial/genetics , Phylogeny , Animals , Cytochromes b/genetics , Europe
6.
Diagn Interv Imaging ; 93(12): 985-92, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23164638

ABSTRACT

The spinal canal is frequently a source of difficulties, traps and diagnostic errors. Pitfalls related to artifacts are resolved by using appropriate sequences. Good knowledge of the appearance of certain particular anatomical structures (the cauda equina roots, the radicular veins of the lumbar spine and conus medullaris, the dorsal root ganglion) and of frequent variants (fibrolipoma of the filum terminale, common root sheaths, root cysts) will avoid a good many errors. Dilatation of epidural veins in intracranial hypotension can simulate the contrast enhancement of a tumour. An increase in epidural fat can induce pathogenic stenosis of the dural sheath.


Subject(s)
Magnetic Resonance Imaging , Neuroimaging , Spinal Canal/anatomy & histology , Artifacts , Humans , Spinal Canal/pathology , Spinal Cord Diseases/diagnosis , Spinal Diseases/diagnosis
7.
Diagn Interv Imaging ; 93(10): 734-49, 2012 Oct.
Article in English | MEDLINE | ID: mdl-23017374

ABSTRACT

Sentinel lesions are lesions of the bone or soft tissue, visible in standard X-rays carried out within a traumatic context, indicating bone or more severe capsular ligament lesions not visible on these X-rays. A detailed review of the peripheral joints as well as the spine is carried out with an example of each type of lesion in a standard X-ray. Confrontation with the reference examination, CT or MRI, depending on the case, is then carried out.


Subject(s)
Arthrography , Bone and Bones/diagnostic imaging , Bone and Bones/injuries , Joints/injuries , Soft Tissue Injuries/diagnostic imaging , Soft Tissue Injuries/etiology , Humans
8.
Surg Radiol Anat ; 33(6): 473-80, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21455837

ABSTRACT

The purpose of our study was to demonstrate and describe the MR and arthro-CT anatomic appearance of the scaphotrapezial ligament and illustrate some of the pathologies involving this structure. This ligament consists of two slips that originate from the radiopalmar aspect of the scaphoid tuberosity and extend distally, forming a V shape. The ulnar fibers, which are just radial to the flexor carpi radialis sheath, inserted along the trapezial ridge. The radial fibers were found to be thinner and inserted at the radial aspect of the trapezium. Twelve fresh cadaver wrists were dissected, with close attention paid to the scaphotrapezio-trapezoidal (STT) joint. An osseoligamentous specimen was dissected with removal of all musculotendinous structures around the STT joint and was performed with high-resolution acquisition in a 128-MDCT scanner. Samples of the wrist area were collected from two fetal specimens. A retrospective study of 55 patients with wrist pain that were submitted to arthrography, arthro-CT, and arthro-MRI imaging was performed (10 patients on a 3-T superconducting magnet and 45 patients on a 1.5-T system). Another ten patients had high-resolution images on a 3-T superconducting magnet without arthrographic injection. MR arthrography and arthro-CT improved visualization and provided detailed information about the anatomy of the scaphotrapezial ligament. Knowledge of the appearance of this normal ligament on MRI allows accurate diagnosis of lesions and will aid when surgery is indicated or may have a role in avoiding unnecessary immobilization.


Subject(s)
Ligaments, Articular/anatomy & histology , Magnetic Resonance Imaging/methods , Tomography, X-Ray Computed/methods , Wrist Joint/anatomy & histology , Wrist Joint/pathology , Arthralgia/diagnosis , Arthrography/methods , Cadaver , Dissection , Female , Humans , Ligaments, Articular/diagnostic imaging , Male , Reference Values , Retrospective Studies , Scaphoid Bone/anatomy & histology , Scaphoid Bone/diagnostic imaging , Sensitivity and Specificity , Trapezium Bone/anatomy & histology , Trapezium Bone/diagnostic imaging
9.
Biochem Biophys Res Commun ; 179(1): 259-65, 1991 Aug 30.
Article in English | MEDLINE | ID: mdl-1652951

ABSTRACT

A fluorescent probe for retinoid receptors (RARs) was designed and prepared. The probe consists of a retinoid moiety and a dansyl moiety, i.e., 2-[3-(5-dimethylaminonaphthalene-1-sulfonyl)- aminopropyl-1-oxy]-4-[(5,6,7,8-tetrahydro-5,5,8,8-tetramethyl-2- naphthalenyl)carboxamido]benzoic acid: DAM-3. DAM-3 specifically bound RARs. Additionally, a photoreactive RAR fluorescent probe was designed and prepared, i.e., 2-[3-(5-azidonaphthalene- 1-sulfonyl)aminopropyl-1-oxy]-4-[(5,6,7,8-tetrahydro-5,5,8,8- tetramethyl-2-naphthalenyl)carboxamido]benzoic acid (ADAM-3). ADAM-3 irreversibly and specifically bound RARs using ultraviolet irradiation.


Subject(s)
Affinity Labels/chemical synthesis , Carrier Proteins/analysis , Fluorescent Dyes/chemical synthesis , Tretinoin/metabolism , Binding, Competitive , Carrier Proteins/metabolism , Dansyl Compounds , HeLa Cells/metabolism , Humans , Indicators and Reagents , Kinetics , Magnetic Resonance Spectroscopy , Receptors, Retinoic Acid , Structure-Activity Relationship
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