ABSTRACT
Phosphatidylinositol 4-phosphate 5-kinases (PIP5Ks), essential enzymes in the phosphatidylinositol signaling pathway, are crucial for the abiotic stress responses and the overall growth and development of plants. However, the GhPIP5Ks had not been systematically studied, and their function in upland cotton was unknown. This study identified a total of 28 GhPIP5Ks, and determined their chromosomal locations, gene structures, protein motifs and cis-acting elements via bioinformatics analysis. A quantitative real-time PCR (qRTâPCR) analysis showed that most GhPIP5Ks were upregulated under different stresses. A virus-induced gene silencing (VIGS) assay indicated that the superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities were significantly decreased, while malondialdehyde (MDA) content were significantly increased in GhPIP5K2- and GhPIP5K22-silenced upland cotton plants under abiotic stress. Furthermore, the expression of the stress marker genes GhHSFB2A, GhHSFB2B, GhDREB2A, GhDREB2C, GhRD20-1, GhRD29A, GhBIN2, GhCBL3, GhNHX1, GhPP2C, GhCBF1, GhSnRK2.6 and GhCIPK6 was significantly decreased in the silenced plants after exposure to stress. These results revealed that the silencing of GhPIP5K2 and GhPIP5K22 weakened the tolerance to abiotic stresses. These discoveries provide a foundation for further inquiry into the actions of the GhPIP5K gene family in regulating the response and resistance mechanisms of cotton to abiotic stresses.
Subject(s)
Gossypium , Stress, Physiological , Gossypium/metabolism , Stress, Physiological/genetics , Regulatory Sequences, Nucleic Acid , Signal Transduction , Computational Biology , Gene Expression Regulation, Plant , Plant Proteins/genetics , Plant Proteins/metabolism , PhylogenyABSTRACT
Nutrient and heavy metal concentrations in porewater/overlying water and their benthic fluxes were investigated to study their accumulation and transport at the sediment-water interface and the influences of sediment in the Pearl River Estuary, China. Results revealed that distribution of nutrients and metals reflected the effects of terrestrial inputs and some physicochemical processes. Benthic fluxes also suggested that nutrients and heavy metals Pb, Zn and Cd diffused from sediment to overlying water, but not for As, Co, Cr, Fe, Mn and Ni. Exchange capacities showed that 106-108 mol nutrients and 105-107 g Pb, Zn and Cd released from sediment to overlying water annually, indicating their potential ecological threat. However, 105-109 g metals As, Co, Cr, Fe, Mn and Ni were deposited annually, which may reduce the pollution pressure caused by anthropogenic activities. This study will provide references for the potential influence of benthic fluxes on estuarine environment globally.
Subject(s)
Metals, Heavy , Water Pollutants, Chemical , Cadmium , China , Environmental Monitoring , Estuaries , Geologic Sediments , Lead , Metals, Heavy/analysis , Nutrients , Rivers , Water , Water Pollutants, Chemical/analysisABSTRACT
With the availability of large geospatial datasets, the study of collective human mobility spatiotemporal patterns provides a new way to explore urban spatial environments from the perspective of residents. In this paper, we constructed a classification model for mobility patterns that is suitable for taxi OD (Origin-Destination) point data, and it is comprised of three parts. First, a new aggregate unit, which uses a road intersection as the constraint condition, is designed for the analysis of the taxi OD point data. Second, the time series similarity measurement is improved by adding a normalization procedure and time windows to address the particular characteristics of the taxi time series data. Finally, the DBSCAN algorithm is used to classify the time series into different mobility patterns based on a proximity index that is calculated using the improved similarity measurement. In addition, we used the random forest algorithm to establish a correlation model between the mobility patterns and the regional functional characteristics. Based on the taxi OD point data from Nanjing, we delimited seven mobility patterns and illustrated that the regional functions have obvious driving effects on these mobility patterns. These findings are applicable to urban planning, traffic management and planning, and land use analyses in the future.