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1.
Neuron ; 110(22): 3711-3726.e16, 2022 11 16.
Article in English | MEDLINE | ID: mdl-36087583

ABSTRACT

Axon degeneration is an early pathological event in many neurological diseases. The identification of the nicotinamide adenine dinucleotide (NAD) hydrolase SARM1 as a central metabolic sensor and axon executioner presents an exciting opportunity to develop novel neuroprotective therapies that can prevent or halt the degenerative process, yet limited progress has been made on advancing efficacious inhibitors. We describe a class of NAD-dependent active-site SARM1 inhibitors that function by intercepting NAD hydrolysis and undergoing covalent conjugation with the reaction product adenosine diphosphate ribose (ADPR). The resulting small-molecule ADPR adducts are highly potent and confer compelling neuroprotection in preclinical models of neurological injury and disease, validating this mode of inhibition as a viable therapeutic strategy. Additionally, we show that the most potent inhibitor of CD38, a related NAD hydrolase, also functions by the same mechanism, further underscoring the broader applicability of this mechanism in developing therapies against this class of enzymes.


Subject(s)
Armadillo Domain Proteins , NAD , Armadillo Domain Proteins/genetics , Armadillo Domain Proteins/metabolism , NAD/metabolism , Neuroprotection , Cytoskeletal Proteins/metabolism , Axons/metabolism , Hydrolases/metabolism
2.
J Biol Chem ; 293(32): 12634-12646, 2018 08 10.
Article in English | MEDLINE | ID: mdl-29794134

ABSTRACT

Triggering receptor expressed on myeloid cells 2 (TREM2) is an immune receptor expressed on the surface of microglia, macrophages, dendritic cells, and osteoclasts. The R47H TREM2 variant is a significant risk factor for late-onset Alzheimer's disease (AD), and the molecular basis of R47H TREM2 loss of function is an emerging area of TREM2 biology. Here, we report three high-resolution structures of the extracellular ligand-binding domains (ECDs) of R47H TREM2, apo-WT, and phosphatidylserine (PS)-bound WT TREM2 at 1.8, 2.2, and 2.2 Å, respectively. The structures reveal that Arg47 plays a critical role in maintaining the structural features of the complementarity-determining region 2 (CDR2) loop and the putative positive ligand-interacting surface (PLIS), stabilizing conformations capable of ligand interaction. This is exemplified in the PS-bound structure, in which the CDR2 loop and PLIS drive critical interactions with PS via surfaces that are disrupted in the variant. Together with in vitro and in vivo characterization, our structural findings elucidate the molecular mechanism underlying loss of ligand binding, putative oligomerization, and functional activity of R47H TREM2. They also help unravel how decreased in vitro and in vivo stability of TREM2 contribute to loss of function in disease.


Subject(s)
Alzheimer Disease/genetics , Genetic Predisposition to Disease , Membrane Glycoproteins/chemistry , Mutant Proteins/chemistry , Receptors, Immunologic/chemistry , Alzheimer Disease/pathology , Crystallography, X-Ray , Dendritic Cells/chemistry , Dendritic Cells/pathology , Genetic Variation , Humans , Ligands , Macrophages/chemistry , Macrophages/pathology , Membrane Glycoproteins/genetics , Microglia/chemistry , Microglia/pathology , Mutant Proteins/genetics , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/genetics , Osteoclasts/chemistry , Osteoclasts/pathology , Protein Conformation , Protein Domains/genetics , Receptors, Immunologic/genetics
3.
J Biol Chem ; 293(32): 12620-12633, 2018 08 10.
Article in English | MEDLINE | ID: mdl-29599291

ABSTRACT

Triggering receptor expressed on myeloid cells 2 (TREM2) is an orphan immune receptor expressed on cells of myeloid lineage such as macrophages and microglia. The rare variant R47H TREM2 is associated with an increased risk for Alzheimer's disease, supporting the hypothesis that TREM2 loss of function may exacerbate disease progression. However, a complete knockout of the TREM2 gene in different genetic models of neurodegenerative diseases has been reported to result in both protective and deleterious effects on disease-related end points and myeloid cell function. Here, we describe a Trem2R47H transgenic mouse model and report that even in the absence of additional genetic perturbations, this variant clearly confers a loss of function on myeloid cells. The Trem2R47H variant-containing myeloid cells exhibited subtle defects in survival and migration and displayed an unexpected dysregulation of cytokine responses in a lipopolysaccharide challenge environment. These subtle phenotypic defects with a gradation in severity across genotypes were confirmed in whole-genome RNA-Seq analyses of WT, Trem2-/-, and Trem2R47H myeloid cells under challenge conditions. Of note, TREM2-activating antibodies that boost proximal signaling abrogated survival defects conferred by the variant and also modulated migration and cytokine responses in an antibody-, ligand-, and challenge-dependent manner. In some instances, these antibodies also boosted WT myeloid cell function. Our studies provide a first glimpse into the boost in myeloid cell function that can be achieved by pharmacological modulation of TREM2 activity that can potentially be ameliorative in neurodegenerative diseases such as Alzheimer's disease.


Subject(s)
Alzheimer Disease/drug therapy , Antibodies, Monoclonal/pharmacology , Apoptosis , Cell Movement , Membrane Glycoproteins/physiology , Mutation , Myeloid Cells/pathology , Receptors, Immunologic/physiology , Alzheimer Disease/genetics , Alzheimer Disease/pathology , Animals , Biomarkers/metabolism , Brain/immunology , Brain/metabolism , Brain/pathology , Cells, Cultured , Female , High-Throughput Nucleotide Sequencing , Humans , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Microglia/immunology , Microglia/metabolism , Microglia/pathology , Myeloid Cells/immunology , Myeloid Cells/metabolism
4.
J Pharmacol Exp Ther ; 352(2): 327-37, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25502803

ABSTRACT

Phosphodiesterase 10A (PDE10A) inhibitors have therapeutic potential for the treatment of psychiatric and neurologic disorders, such as schizophrenia and Huntington's disease. One of the key requirements for successful central nervous system drug development is to demonstrate target coverage of therapeutic candidates in brain for lead optimization in the drug discovery phase and for assisting dose selection in clinical development. Therefore, we identified AMG 580 [1-(4-(3-(4-(1H-benzo[d]imidazole-2-carbonyl)phenoxy)pyrazin-2-yl)piperidin-1-yl)-2-fluoropropan-1-one], a novel, selective small-molecule antagonist with subnanomolar affinity for rat, primate, and human PDE10A. We showed that AMG 580 is suitable as a tracer for lead optimization to determine target coverage by novel PDE10A inhibitors using triple-stage quadrupole liquid chromatography-tandem mass spectrometry technology. [(3)H]AMG 580 bound with high affinity in a specific and saturable manner to both striatal homogenates and brain slices from rats, baboons, and human in vitro. Moreover, [(18)F]AMG 580 demonstrated prominent uptake by positron emission tomography in rats, suggesting that radiolabeled AMG 580 may be suitable for further development as a noninvasive radiotracer for target coverage measurements in clinical studies. These results indicate that AMG 580 is a potential imaging biomarker for mapping PDE10A distribution and ensuring target coverage by therapeutic PDE10A inhibitors in clinical studies.


Subject(s)
Benzimidazoles/pharmacology , Brain/enzymology , Phosphodiesterase Inhibitors/pharmacology , Phosphoric Diester Hydrolases/metabolism , Positron-Emission Tomography/methods , Pyrazines/pharmacology , Animals , Benzimidazoles/pharmacokinetics , Brain/diagnostic imaging , Chromatography, Liquid , Female , Fluorine Radioisotopes , Humans , Male , Mass Spectrometry , Molecular Structure , Papio , Phosphodiesterase Inhibitors/chemistry , Phosphodiesterase Inhibitors/pharmacokinetics , Protein Binding , Pyrazines/pharmacokinetics , Radioligand Assay , Rats, Sprague-Dawley , Species Specificity , Stereoisomerism , Surface Plasmon Resonance , Tissue Distribution
5.
J Med Chem ; 57(15): 6632-41, 2014 Aug 14.
Article in English | MEDLINE | ID: mdl-25062128

ABSTRACT

We report the identification of a PDE10A clinical candidate by optimizing potency and in vivo efficacy of promising keto-benzimidazole leads 1 and 2. Significant increase in biochemical potency was observed when the saturated rings on morpholine 1 and N-acetyl piperazine 2 were changed by a single atom to tetrahydropyran 3 and N-acetyl piperidine 5. A second single atom modification from pyrazines 3 and 5 to pyridines 4 and 6 improved the inhibitory activity of 4 but not 6. In the in vivo LC-MS/MS target occupancy (TO) study at 10 mg/kg, 3, 5, and 6 achieved 86-91% occupancy of PDE10A in the brain. Furthermore, both CNS TO and efficacy in PCP-LMA behavioral model were observed in a dose dependent manner. With superior in vivo TO, in vivo efficacy and in vivo PK profiles in multiple preclinical species, compound 5 (AMG 579) was advanced as our PDE10A clinical candidate.


Subject(s)
Antipsychotic Agents/chemistry , Benzimidazoles/chemistry , Phosphodiesterase Inhibitors/chemistry , Phosphoric Diester Hydrolases/metabolism , Pyrazines/chemistry , Administration, Oral , Animals , Antipsychotic Agents/chemical synthesis , Antipsychotic Agents/pharmacology , Benzimidazoles/chemical synthesis , Benzimidazoles/pharmacology , Biological Availability , Brain/metabolism , Dogs , Humans , Male , Motor Activity/drug effects , Phosphodiesterase Inhibitors/chemical synthesis , Phosphodiesterase Inhibitors/pharmacology , Phosphoric Diester Hydrolases/chemistry , Primates , Protein Conformation , Pyrazines/chemical synthesis , Pyrazines/pharmacology , Rats, Sprague-Dawley , Structure-Activity Relationship
6.
J Med Chem ; 55(10): 4776-87, 2012 May 24.
Article in English | MEDLINE | ID: mdl-22548439

ABSTRACT

A radiolabeled tracer for imaging therapeutic targets in the brain is a valuable tool for lead optimization in CNS drug discovery and for dose selection in clinical development. We report the rapid identification of a novel phosphodiesterase 10A (PDE10A) tracer candidate using a LC-MS/MS technology. This structurally distinct PDE10A tracer, AMG-7980 (5), has been shown to have good uptake in the striatum (1.2% ID/g tissue), high specificity (striatum/thalamus ratio of 10), and saturable binding in vivo. The PDE10A affinity (K(D)) and PDE10A target density (B(max)) were determined to be 0.94 nM and 2.3 pmol/mg protein, respectively, using [(3)H]5 on rat striatum homogenate. Autoradiography on rat brain sections indicated that the tracer signal was consistent with known PDE10A expression pattern. The specific binding of [(3)H]5 to rat brain was blocked by another structurally distinct, published PDE10A inhibitor, MP-10. Lastly, our tracer was used to measure in vivo PDE10A target occupancy of a PDE10A inhibitor in rats using LC-MS/MS technology.


Subject(s)
Aminopyridines/chemical synthesis , Phosphoric Diester Hydrolases/metabolism , Pyridazines/chemical synthesis , ATP Binding Cassette Transporter, Subfamily B, Member 1/metabolism , Aminopyridines/chemistry , Aminopyridines/pharmacokinetics , Animals , Brain/diagnostic imaging , Brain/enzymology , Cell Line , Chromatography, Liquid , Dogs , Humans , In Vitro Techniques , Male , Permeability , Phosphodiesterase Inhibitors/chemical synthesis , Phosphodiesterase Inhibitors/chemistry , Phosphodiesterase Inhibitors/pharmacokinetics , Protein Binding , Pyrazoles/pharmacokinetics , Pyridazines/chemistry , Pyridazines/pharmacokinetics , Quinolines/pharmacokinetics , Radionuclide Imaging , Radiopharmaceuticals/chemical synthesis , Radiopharmaceuticals/chemistry , Radiopharmaceuticals/pharmacokinetics , Rats , Rats, Sprague-Dawley , Stereoisomerism , Surface Plasmon Resonance , Tandem Mass Spectrometry , Tissue Distribution , Tritium
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