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1.
Genet Mol Res ; 15(1)2016 Feb 05.
Article in English | MEDLINE | ID: mdl-26909959

ABSTRACT

UDP-glucuronate decarboxylase (UDP-xylose synthase; UXS, EC 4.1.1.35) is an essential enzyme of the non-cellulosic polysaccharide biosynthetic pathway. In the present study, using transient expression of fluorescently labeled Gossypium hirsutum UXS (GhUXS3) protein in onion epidermal cells, we observed that this protein was distributed in the cytoplasm. The GhUXS3 cDNA of cotton was expressed in an antisense orientation in Arabidopsis thaliana by Agrobacterium tumefaciens-mediated transformation. Homozygous plants showing down-regulation of UXS were analyzed with northern blots. Compared to the untransformed control, transgenic plant showed shorter roots, earlier blossom formation, and delayed senescence. Biochemical analysis indicated that levels of rhamnose, mannose, galactose, glucose, xylose, and cellulose were reduced in some of the down-regulated antisense plants. These results suggest that GhUXS3 regulates the conversion of non-cellulosic polysaccharides and modulates their composition in plant cell walls. We also discuss a possible cellular function for GhUXS in determining the quality of cotton fibers.


Subject(s)
Arabidopsis/genetics , Carbohydrate Metabolism/genetics , Carboxy-Lyases/genetics , Cell Wall/metabolism , DNA, Antisense , Gossypium/enzymology , Aging , Arabidopsis/metabolism , Arabidopsis/physiology , Cell Wall/chemistry , DNA, Plant , Flowers/growth & development , Gene Expression Regulation, Plant , Genes, Plant , Gossypium/genetics , Plant Roots/anatomy & histology , Plants, Genetically Modified
2.
Genet Mol Res ; 14(4): 15779-82, 2015 Dec 02.
Article in English | MEDLINE | ID: mdl-26634545

ABSTRACT

This study aimed to identify the disease-causing mutation in the ectodysplasin A (EDA) gene in a Chinese family affected by X-linked hypohidrotic ectodermal dysplasia (XLHED). A family clinically diagnosed with XLHED was investigated. For mutation analysis, the coding region of EDA of 2 patients and 7 unaffected members of the family was sequenced. The detected mutation in EDA was investigated in 120 normal controls. A missense mutation (c.878T>G) in EDA was detected in 2 patients and 3 female carriers, but not in 4 unaffected members of the family. The mutation was not found in the 120 healthy controls and has not been reported previously. Our findings indicate that a novel mutation (c.878T>G) of EDA is associated with XLHED and adds to the repertoire of EDA mutations.


Subject(s)
Ectodermal Dysplasia 1, Anhidrotic/genetics , Ectodysplasins/genetics , Mutation , Adult , Alleles , Amino Acid Sequence , Amino Acid Substitution , Base Sequence , DNA Mutational Analysis , Ectodermal Dysplasia 1, Anhidrotic/diagnosis , Ectodysplasins/chemistry , Female , Humans , Male , Pedigree , Phenotype , Young Adult
3.
Genet Mol Res ; 14(3): 8532-8, 2015 Jul 28.
Article in English | MEDLINE | ID: mdl-26345783

ABSTRACT

In addition to the host immune response, genetic and environmental factors play crucial roles in the manifestation of hepatitis B virus (HBV) infection. The macrophage migration inhibitory factor (MIF) -173G/C polymorphism (rs755622), located in the promoter region of MIF, may play integral roles in diverse processes, including the immune response. Thus, the MIF -173G/C polymorphism may influence the immune response to HBV during natural infection. We investigated whether the MIF -173G/C polymorphism was associated with susceptibility to HBV infection in a Chinese Han population. A total of 596 HBV infection cases and 612 age-matched controls were recruited for the study. Genotyping of the MIF -173G/C polymorphism was performed using the allele-specific polymerase chain reaction method. The frequencies of the alleles and genotypes in patients and controls were compared using the χ(2) test. Carriers of the variant C allele in MIF -173 G/C were at significantly higher risk of HBV infection than carriers of the wild-type allele (P = 0.032, odds ratio = 0.799, 95% confidence interval = 0.651-0.981). However, there was no significant difference in the distribution of MIF -173G/C genotypes between case and control groups in either population (P = 0.096, degrees of freedom = 2). Our findings indicate that the G to C base change in MIF -173 G/C confers an increased risk of development of HBV infection by altering the expression of MIF in our Chinese Han population.


Subject(s)
Hepatitis B, Chronic/genetics , Intramolecular Oxidoreductases/genetics , Macrophage Migration-Inhibitory Factors/genetics , Adult , Aged , Asian People/genetics , Case-Control Studies , China , Female , Gene Frequency , Genetic Association Studies , Genetic Predisposition to Disease , Hepatitis B virus/isolation & purification , Hepatitis B, Chronic/enzymology , Humans , Male , Middle Aged , Odds Ratio , Polymerase Chain Reaction , Polymorphism, Single Nucleotide , Promoter Regions, Genetic
4.
Genet Mol Res ; 10(4): 3539-44, 2011 Dec 14.
Article in English | MEDLINE | ID: mdl-22194205

ABSTRACT

We identified a disease-causing mutation of the RUNX2 gene in a four-generation Chinese family affected with cleidocranial dysplasia (CCD). For mutation analysis, the coding region of RUNX2 was sequenced with DNA from two patients and three unaffected family members. The RUNX2 mutation was investigated in 50 normal controls by denaturing high pressure liquid chromatography. A heterozygous single-base deletion (c.549delC) of RUNX2, which predicts a termination site at the 185th codon and leads to a stop in the runt domain of RUNX2 protein, was detected in both patients but not in the three unaffected members of the family. This mutation was also not found in 50 controls and has not been reported previously. We demonstrated that a novel mutation (c.549delC) of RUNX2 is associated with CCD in a Chinese family, adding to the repertoire of RUNX2 mutations related to CCD.


Subject(s)
Asian People/genetics , Cleidocranial Dysplasia/genetics , Core Binding Factor Alpha 1 Subunit/genetics , Sequence Deletion/genetics , Adolescent , Amino Acid Sequence , Base Sequence , China , Cleidocranial Dysplasia/diagnostic imaging , Core Binding Factor Alpha 1 Subunit/chemistry , DNA Mutational Analysis , Family , Female , Genetic Predisposition to Disease , Humans , Male , Molecular Sequence Data , Pedigree , Phenotype , Radiography
5.
Genet Mol Res ; 10(4): 2517-22, 2011 Oct 18.
Article in English | MEDLINE | ID: mdl-22009864

ABSTRACT

Congenital nephrotic syndrome of the Finnish type (CNF) is a lethal, autosomal recessive disorder mainly caused by mutations in the NPHS1 gene; it is found at a relatively high frequency in Finns. We investigated the disease-causing mutations in a Chinese family with CNF and developed a prenatal genetic diagnosis for their latest pregnancy. Mutation analysis was made of all exons and exon/intron boundaries of NPHS1 in the fetus, parents and 50 unrelated controls using PCR and direct sequencing. A heterozygous nonsense mutation within exon 20 (c.2783C>A) and a missense mutation within exon 17 (c.2225T>C) in NPHS1 were detected in the proband's father and mother, respectively, but were not found in the fetus or in 50 unrelated controls. Two novel mutations of c.2783C>A and c.2225T>C in NPHS1 were found to be causative in this Chinese CNF family with no known Finnish ancestry. The most recent sibling did not inherit these two mutations and hence was unaffected with CNF. Determining the cumulative number and ethnic distribution of known mutations can help expedite further study of the pathogenesis of CNF.


Subject(s)
Codon, Nonsense , Exons/genetics , Membrane Proteins/genetics , Mutation, Missense , Nephrotic Syndrome/genetics , Adult , Asian People/ethnology , Asian People/genetics , China/ethnology , Family , Female , Humans , Infant, Newborn , Male , Nephrotic Syndrome/ethnology , Pedigree , Pregnancy
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