FieldSimR: an R package for simulating plot data in multi-environment field trials.

This paper presents a general framework for simulating plot data in multi-environment field trials with one or more traits. The framework is embedded within the R package FieldSimR, whose core function generates plot errors that capture global field trend, local plot variation, and extraneous variation at a user-defined ratio. FieldSimR's capacity to simulate realistic plot data makes it a flexible and powerful tool for a wide range of improvement processes in plant breeding, such as the optimisation of experimental designs and statistical analyses of multi-environment field trials. FieldSimR provides crucial functionality that is currently missing in other software for simulating plant breeding programmes and is available on CRAN. The paper includes an example simulation of field trials that evaluate 100 maize hybrids for two traits in three environments. To demonstrate FieldSimR's value as an optimisation tool, the simulated data set is then used to compare several popular spatial models for their ability to accurately predict the hybrids' genetic values and reliably estimate the variance parameters of interest. FieldSimR has broader applications to simulating data in other agricultural trials, such as glasshouse experiments.

Effects of PM10 Airborne Particles from Different Regions of a Megacity on In Vitro Secretion of Cytokines by a Monocyte Line during Different Seasons.

Several epidemiological studies have demonstrated that particulate matter (PM) in air pollution can be involved in the genesis or aggravation of different cardiovascular, respiratory, perinatal, and cancer diseases. This study assessed the in vitro effects of PM10 on the secretion of cytokines by a human monocytic cell line (THP-1). We compared the chemotactic, pro-inflammatory, and anti-inflammatory cytokines induced by PM10 collected for two years during three different seasons in five different Mexico City locations. MIP-1α, IP-10, MCP-1, TNF-α, and VEGF were the main secretion products after stimulation with 80 µg/mL of PM10 for 24 h. The THP-1 cells showed a differential response to PM10 obtained in the different sites of Mexico City. The PM10 from the north and the central city areas induced a higher pro-inflammatory cytokine response than those from the south. Seasonal pro-inflammatory cytokine secretion always exceeded anti-inflammatory secretion. The rainy-season-derived particles caused the lowest pro-inflammatory effects. We concluded that toxicological assessment of airborne particles provides evidence supporting their potential role in the chronic exacerbation of local or systemic inflammatory responses that may worsen the evolution of some chronic diseases.

Ecological variation in invasive brown trout (Salmo trutta) within a remote coastal river catchment in northern Patagonia complicates estimates of invasion impact.

Salmonids were first introduced into the Chilean fresh waters in the 1880s, and c. 140 years later, they are ubiquitous across Chilean rivers, especially in the southern pristine fresh waters. This study examined the brown trout (Salmo trutta) and native taxa ecology in two adjacent but contrasting rivers of Chilean Patagonia. During spring 2016 and spring-fall 2017 we examined the variation in benthic macroinvertebrate and fish community composition and characterized fish size structure, stomach contents, and stable isotopes (δ13 C and δ15 N) to understand population structure, fish diet, and trophic interactions between S. trutta and native taxa. The native Galaxias maculatus (puye) dominated the fish community (74% of abundance). S. trutta was less abundant (16% of survey catch) but dominated the fish community (over 53%) in terms of biomass. S. trutta showed distinct diets (stomach content analysis) in the two rivers, and individuals from the larger river were notably more piscivorous, consuming native fish with a relatively small body size (<100-mm total length). Native fishes were isotopically distinct from S. trutta, which showed a wider isotopic niche in the smaller river, indicating that their trophic role was more variable than in the larger river (piscivorous). This study provides data from the unstudied pristine coastal rivers in Patagonia and reveals that interactions between native and introduced species can vary at very local spatial scales.

Assessment of natural radioactivity level before and after a mud-volcano eruption: A study from Piparo mud-volcano, Trinidad and Tobago.

The present study was conducted in the Piparo mud-volcano, which is situated in the central part of the island of Trinidad, is geologically connected with the Central Fault Range Zone (CFRZ). This fault zone is a neotectonic (active) strike-slip fault system and an extension of the Andes Mountain chain. This study was aimed at detecting the possible gamma radiation level in Piparo MV after its eruption in September 2019 and finding the change in the ambient radiation level after that eruption. To achieve this aim, gamma radiation data were collected for 6 months (three times at 3 months interval) after this eruption. As a pilot study, gamma radiation measurements were measured with the help of a portable Geiger Muller counter from 32 locations. Radiation levels were nearly 2 times higher than the average background levels in the country indicating Piparo mud-volcano could have controlled the elevated radiation levels in the area. Good correlations were also found between elevated radiation in the northern and western sides of the main crater and presence of auxiliary craters in the same sides. Previous studies reported that the northern side of the crater was more active, and the present study also supported their observation. Good correlation (with coefficient >0.9) indicates that these radioactivity values might be syngenetic. Continuous release and slow reduction of radiation levels (only 13% over 6 months) may indicate a continuous activity in Piparo mud-volcano and may support CRFZ as a creep fault.

Environmental and Seasonal Effects on Gerridae Assemblages (Heteroptera: Gerromorpha) from a Stream in Brazilian Savannah.

Our aim here was to assess the seasonal (dry, ebb, and rainy seasons), spatial (upstream, intermediate, and downstream), and environmental effects on the dynamics of Gerridae assemblages (Heteroptera: Gerromorpha) in a Cerrado stream, in central-western Brazil. We sampled the insects on the water line between May 2011 and April 2014 with an 18 cm diameter sieve. We used the scanning method in 100 m of stream in each sampled locality. We sampled 3690 individuals of 19 species. There was a seasonal difference in abundance, which was a result of a lower abundance in the rainy season, but this did not differ between different environments. The estimated species richness was lower upstream and in the rainy season. Species composition was different between the upstream and downstream portions. It was also different among all seasons, with the greatest difference occurring between the rainy and dry seasons. The abiotic factors were responsible for structuring the assemblages in different seasons. The observed differences among seasons in abundance, richness, and species composition have implications for conservation since changes in the structure of the vegetation in the stream edges change the hydrological cycle of streams, and consequently the diversity of the Gerridae assemblages. There was variation in richness and composition between such small distances (upstream and downstream). This shows how sensitive this system can be, and how important elements of the stream's trophic, with the Gerromorpha, can be easily altered.

Geospatial Variability in Excess Death Rates during the COVID-19 Pandemic in Mexico: Examining Socio Demographic, Climate and Population Health Characteristics.

OBJECTIVES: This study examined how socio-demographic, climate and population health characteristics shaped the geospatial variability in excess mortality patterns during the COVID-19 pandemic in Mexico. METHODS: We used Serfling regression models to estimate all-cause excess mortality rates for all 32 Mexican states. The association between socio-demographic, climate, health indicators and excess mortality rates were determined using multiple linear regression analyses. Functional data analysis characterized clusters of states with distinct excess mortality growth rate curves. RESULTS: The overall all-cause excess deaths rate during the COVID-19 pandemic in Mexico until April 10, 2021 was estimated at 39.66 per 10 000 population. The lowest excess death rates were observed in southeastern states including Chiapas (12.72) and Oaxaca (13.42), whereas Mexico City had the highest rate (106.17), followed by Tlaxcala (51.99). We found a positive association of excess mortality rates with aging index, marginalization index, and average household size (P < 0.001) in the final adjusted model (Model R2=77%). We identified four distinct clusters with qualitatively similar excess mortality curves. CONCLUSION: Central states exhibited the highest excess mortality rates, whereas the distribution of aging index, marginalization index, and average household size explained the variability in excess mortality rates across Mexico.

Acoustic monitors and direct observations provide similar but distinct perspectives on bird assemblages in a lowland forest of eastern Ecuador.

Bird communities in lowland Neotropical forests exhibit temporal and spatial variation in species composition and abundance at multiple scales. Detecting and explaining such variation requires adequate methods for sampling those bird communities but counting birds in highly diverse lowland forests of the Neotropics can be particularly challenging. Point counts are one of the most frequently used methods for counting birds in tropical forests but inter- and intra-observer variability in detecting and identifying sounds may cause problems. Acoustic monitors (passive acoustic monitors; autonomous recording units) provide an alternative and potentially effective method to sample bird communities by acting, in effect, as "point counts", recording vocalizations at a given point for a set time. I used acoustic monitors to examine patterns of species richness, spatial distribution, and community composition of birds in a lowland forest in eastern Ecuador, one of the most diverse regions on earth. I deployed monitors at 25 locations, each separated by at least 200 m, on each of two 100-ha plots (Harpia, Puma) at Tiputini Biodiversity Station during January-February, 2013-2017. Monitors were set to record for 10 min followed by a 5-min break, from 0545 h to 0810 h (10 recording periods/morning). Recordings were later reviewed to identify species; no attempt was made to distinguish individuals or to estimate distance. Results were compared with contemporaneous direct observations along transects on the same plots. A total of 214 species were identified from recordings on both plots, combined, with slightly more on Harpia (208) than on Puma (188). Number per year ranged from 142 on Harpia in 2016 to 161 on Puma in 2015. Number per point was ~45 with an overall range of 29-68. Number of species detected in recordings was similar to but somewhat less than the number recorded during direct observations. Number of species recorded increased rapidly from the first period (0545-0555 h) to the third (0615-0625 h) but showed little subsequent change. Most species were recorded at relatively few points; the four most widely distributed species were the same on both plots (Patagioenas plumbea, Xiphorhynchus guttatus, Capito aurita, Ramphastos tucanus), all of which are relatively loud canopy or subcanopy species. Ordinations based on species composition illustrated differences between plots based on both recordings and direct observations; similarly, patterns of species composition differed between methods. Acoustic monitors can be an effective tool for sampling bird communities and may be particularly effective and efficient for sampling loud species with distinctive songs. Nonetheless, results from monitors may provide different perspectives on species composition when compared to direct observations. Which method is preferred likely will depend on the specific objectives of individual studies.

A variação da diversidade de microcrustáceos (Cladocera e Copepoda) a jusante de pequenos reservatórios é influenciada por táxons litorâneos / The variation of microcrustaceans diversity downstream of small reservoirs is influenced by litoranean taxa

Testaram-se as hipóteses de que, assim como em reservatórios de grande áreas de superfície, volumes e vazão, em reservatórios pequenos também ocorrem a diluição gradual e contínua da riqueza, da diversidade e abundância de microcrustáceos (Cladocera e Copepoda) a jusante dos mesmos, sem a recomposição da riqueza a jusante pela falta de rios tributários, lagoas marginais e até pelo pequeno porte do riacho, sem condições para o desenvolvimento do potamoplâncton próprio do sistema. Foram estudados dois pequenos reservatórios e seus trechos a jusante, com coletas diárias a cada seis horas em oito pontos de amostragem, sendo dois lênticos e seis lóticos a jusante de cada. Foram encontradas 19 espécies (11 de Cladocera e oito de Copepoda), com destaque para o maior número de espécies litorâneas do que pelágicas, e a maior abundância de cladóceros litorâneos nos pontos a jusante dos reservatórios. Não houve diferença entre os horários, indicando que a escala espacial foi mais importante que a temporal. Houve maiores valores dos atributos ecológicos nos ambientes lênticos, porém houve aumentos significativos de riqueza e diversidade nos últimos pontos dos trechos de riacho, enquanto que a abundância diminuiu gradativamente a jusante. Não foram encontradas correlações significativas da abundância dos táxons com nenhuma variável limnológica (temperatura, pH, oxigênio dissolvido, turbidez, sólidos totais dissolvidos e transparência), indicando pouco ou nenhum efeito destas variáveis. A análise de cluster com distância euclidiana separou dois grandes grupos, o primeiro formado pelo trecho a jusante do primeiro reservatório e o segundo com os demais pontos. Além da presença dos táxons litorâneos vindos dos reservatórios, houve incremento de táxons litorâneos residentes nos riachos. Pode-se concluir que houve uma diluição da abundância das espécies a jusante dos riachos, mas a riqueza e a diversidade permaneceram estáveis devido à contribuição de táxons litorâneos.(AU)

The hypotheses tested were that, as well as in reservoirs of large surface areas, volumes and flow, in small reservoirs there is also a gradual and continuous dilution of the richness, diversity and abundance of microcrustaceans (Cladocera and Copepoda) downstream reservoirs, without the recomposition of richness downstream due to the lack of tributary rivers, marginal lagoons and even the small size of the stream, with no conditions for the development of its own potamoplankton. Two small reservoirs were studied and in their downstream stretches, with daily collections every six hours at eight sampling points, two lentic and six lotic downstream from each. Nineteen species were found (11 from Cladocera and eight from Copepoda), with emphasis on the greater number of coastal species than pelagic ones, and the greater abundance of coastal cladocerans at the points downstream of the reservoirs. There was no difference between the times, indicating that the spatial scale was more important than the temporal scale. There were higher values of ecological attributes in lentic environments, but there were significant increases in richness and diversity in the last points of the stretches of the stream, while the abundance decreased gradually downstream. No significant correlations were found for the abundance of taxa with any physical and chemical variable (temperature, pH, dissolved oxygen, turbidity, total dissolved solids and transparency), indicating little or no effect of these variables. The cluster analysis with Euclidean distance separated two large groups, the first formed by the stretch downstream of the first reservoir and the second with the other points. In addition to the presence of litoranean taxa coming from reservoirs, there was an increase in litoranean taxa resident in streams. It can be concluded that there was a dilution of the abundance of species downstream of the streams, but the richness and diversity remained stable due to the contribution of litoranean taxa.(AU)

A variação da diversidade de microcrustáceos (Cladocera e Copepoda) a jusante de pequenos reservatórios é influenciada por táxons litorâneos / The variation of microcrustaceans diversity downstream of small reservoirs is influenced by litoranean taxa

Testaram-se as hipóteses de que, assim como em reservatórios de grande áreas de superfície, volumes e vazão, em reservatórios pequenos também ocorrem a diluição gradual e contínua da riqueza, da diversidade e abundância de microcrustáceos (Cladocera e Copepoda) a jusante dos mesmos, sem a recomposição da riqueza a jusante pela falta de rios tributários, lagoas marginais e até pelo pequeno porte do riacho, sem condições para o desenvolvimento do potamoplâncton próprio do sistema. Foram estudados dois pequenos reservatórios e seus trechos a jusante, com coletas diárias a cada seis horas em oito pontos de amostragem, sendo dois lênticos e seis lóticos a jusante de cada. Foram encontradas 19 espécies (11 de Cladocera e oito de Copepoda), com destaque para o maior número de espécies litorâneas do que pelágicas, e a maior abundância de cladóceros litorâneos nos pontos a jusante dos reservatórios. Não houve diferença entre os horários, indicando que a escala espacial foi mais importante que a temporal. Houve maiores valores dos atributos ecológicos nos ambientes lênticos, porém houve aumentos significativos de riqueza e diversidade nos últimos pontos dos trechos de riacho, enquanto que a abundância diminuiu gradativamente a jusante. Não foram encontradas correlações significativas da abundância dos táxons com nenhuma variável limnológica (temperatura, pH, oxigênio dissolvido, turbidez, sólidos totais dissolvidos e transparência), indicando pouco ou nenhum efeito destas variáveis. A análise de cluster com distância euclidiana separou dois grandes grupos, o primeiro formado pelo trecho a jusante do primeiro reservatório e o segundo com os demais pontos. Além da presença dos táxons litorâneos vindos dos reservatórios, houve incremento de táxons litorâneos residentes nos riachos. Pode-se concluir que houve uma diluição da abundância das espécies a jusante dos riachos, mas a riqueza e a diversidade permaneceram estáveis devido à contribuição de táxons litorâneos.

The hypotheses tested were that, as well as in reservoirs of large surface areas, volumes and flow, in small reservoirs there is also a gradual and continuous dilution of the richness, diversity and abundance of microcrustaceans (Cladocera and Copepoda) downstream reservoirs, without the recomposition of richness downstream due to the lack of tributary rivers, marginal lagoons and even the small size of the stream, with no conditions for the development of its own potamoplankton. Two small reservoirs were studied and in their downstream stretches, with daily collections every six hours at eight sampling points, two lentic and six lotic downstream from each. Nineteen species were found (11 from Cladocera and eight from Copepoda), with emphasis on the greater number of coastal species than pelagic ones, and the greater abundance of coastal cladocerans at the points downstream of the reservoirs. There was no difference between the times, indicating that the spatial scale was more important than the temporal scale. There were higher values of ecological attributes in lentic environments, but there were significant increases in richness and diversity in the last points of the stretches of the stream, while the abundance decreased gradually downstream. No significant correlations were found for the abundance of taxa with any physical and chemical variable (temperature, pH, dissolved oxygen, turbidity, total dissolved solids and transparency), indicating little or no effect of these variables. The cluster analysis with Euclidean distance separated two large groups, the first formed by the stretch downstream of the first reservoir and the second with the other points. In addition to the presence of litoranean taxa coming from reservoirs, there was an increase in litoranean taxa resident in streams. It can be concluded that there was a dilution of the abundance of species downstream of the streams, but the richness and diversity remained stable due to the contribution of litoranean taxa.

A variação da diversidade de microcrustáceos (Cladocera e Copepoda) a jusante de pequenos reservatórios é influenciada por táxons litorâneos

ABSTRACT The hypotheses tested were that, as well as in reservoirs of large surface areas, volumes and flow, in small reservoirs there is also a gradual and continuous dilution of the richness, diversity and abundance of microcrustaceans (Cladocera and Copepoda) downstream reservoirs, without the recomposition of richness downstream due to the lack of tributary rivers, marginal lagoons and even the small size of the stream, with no conditions for the development of its own potamoplankton. Two small reservoirs were studied and in their downstream stretches, with daily collections every six hours at eight sampling points, two lentic and six lotic downstream from each. Nineteen species were found (11 from Cladocera and eight from Copepoda), with emphasis on the greater number of coastal species than pelagic ones, and the greater abundance of coastal cladocerans at the points downstream of the reservoirs. There was no difference between the times, indicating that the spatial scale was more important than the temporal scale. There were higher values of ecological attributes in lentic environments, but there were significant increases in richness and diversity in the last points of the stretches of the stream, while the abundance decreased gradually downstream. No significant correlations were found for the abundance of taxa with any physical and chemical variable (temperature, pH, dissolved oxygen, turbidity, total dissolved solids and transparency), indicating little or no effect of these variables. The cluster analysis with Euclidean distance separated two large groups, the first formed by the stretch downstream of the first reservoir and the second with the other points. In addition to the presence of litoranean taxa coming from reservoirs, there was an increase in litoranean taxa resident in streams. It can be concluded that there was a dilution of the abundance of species downstream of the streams, but the richness and diversity remained stable due to the contribution of litoranean taxa.

RESUMO Testaram-se as hipóteses de que, assim como em reservatórios de grande áreas de superfície, volumes e vazão, em reservatórios pequenos também ocorrem a diluição gradual e contínua da riqueza, da diversidade e abundância de microcrustáceos (Cladocera e Copepoda) a jusante dos mesmos, sem a recomposição da riqueza a jusante pela falta de rios tributários, lagoas marginais e até pelo pequeno porte do riacho, sem condições para o desenvolvimento do potamoplâncton próprio do sistema. Foram estudados dois pequenos reservatórios e seus trechos a jusante, com coletas diárias a cada seis horas em oito pontos de amostragem, sendo dois lênticos e seis lóticos a jusante de cada. Foram encontradas 19 espécies (11 de Cladocera e oito de Copepoda), com destaque para o maior número de espécies litorâneas do que pelágicas, e a maior abundância de cladóceros litorâneos nos pontos a jusante dos reservatórios. Não houve diferença entre os horários, indicando que a escala espacial foi mais importante que a temporal. Houve maiores valores dos atributos ecológicos nos ambientes lênticos, porém houve aumentos significativos de riqueza e diversidade nos últimos pontos dos trechos de riacho, enquanto que a abundância diminuiu gradativamente a jusante. Não foram encontradas correlações significativas da abundância dos táxons com nenhuma variável limnológica (temperatura, pH, oxigênio dissolvido, turbidez, sólidos totais dissolvidos e transparência), indicando pouco ou nenhum efeito destas variáveis. A análise de cluster com distância euclidiana separou dois grandes grupos, o primeiro formado pelo trecho a jusante do primeiro reservatório e o segundo com os demais pontos. Além da presença dos táxons litorâneos vindos dos reservatórios, houve incremento de táxons litorâneos residentes nos riachos. Pode-se concluir que houve uma diluição da abundância das espécies a jusante dos riachos, mas a riqueza e a diversidade permaneceram estáveis devido à contribuição de táxons litorâneos.

Bottom-up control of geographic variation in insect herbivory on wild cotton (Gossypium hirsutum) by plant defenses and climate.

PREMISE: The occurrence and amount of herbivory are shaped by bottom-up forces, primarily plant traits (e.g., defenses), and by abiotic factors. Addressing these concurrent effects in a spatial context has been useful in efforts to understand the mechanisms governing variation in plant-herbivore interactions. Still, few studies have evaluated the simultaneous influence of multiple sources of bottom-up variation on spatial variation in herbivory. METHODS: We tested to what extent chemical (phenolics, production of terpenoid glands) and physical (pubescence) defensive plant traits and climatic factors are associated with variation in herbivory by leaf-chewing insects across populations of wild cotton (Gossypium hirsutum). RESULTS: We found substantial population variation in cotton leaf defenses and insect leaf herbivory. Leaf pubescence, but not gossypol gland density or phenolic content, was significantly negatively associated with herbivory by leaf-chewing insects. In addition, there were direct effects of climate on defenses and herbivory, with leaf pubescence increasing toward drier conditions and leaf damage increasing toward wetter and cooler conditions. There was no evidence, however, of indirect effects (via plant defenses) of climate on herbivory. CONCLUSIONS: These results suggest that spatial variation in insect herbivory on wild G. hirsutum is predominantly driven by concurrent and independent influences of population variation in leaf pubescence and climatic factors.

Land-use-dependent spatial variation and exposure risk of heavy metals in road-deposited sediment in Villavicencio, Colombia.

Urbanization-induced land-use changes cause several environmental problems, especially in developing countries due to a lack of sufficient urban planning. This study was performed in a medium-size city of Villavicencio, Colombia. Copper, lead, nickel, zinc, chromium, manganese, and cadmium in road-deposited sediment (RDS) from different land uses were determined. Multiple geo- and statistical approaches of geographic information system mapping, Pearson correlation, Kruskal-Wallis H, hierarchical cluster analysis (HCA), and principal component analyze (PCA) were employed to assess the influence of land use on the metals' spatial distribution. The enrichment of given metals in RDS was evaluated by geo-accumulation (Igeo) and pollution load (PLI) indexes. The exposure human health risk was assessed by hazard index (HI). Results show that the average contents of the given metals decreased in the order of commercial > residential > highway > government institutions and public parks areas. Commercial areas thereafter always have the highest metals enrichment (Igeo) and pollution level (PLI). HI assessment indicates that child has a higher health risk than adult due to the exposure to metals in RDS. HCA analysis reveals that surface roughness had a more direct influence than land-use type on metals' distribution. Kruskal-Wallis H test further suggests land-use type had a significant influence on certain metals' spatial variation. Two potential (group) sources of geochemical and vehicular sources, along with leaded petrol and paintings, were inferred to be the main contributors to metals in RDS by PCA analysis.

Annual and spatial variation in composition and activity of terrestrial mammals on two replicate plots in lowland forest of eastern Ecuador.

Terrestrial mammals are important components of lowland forests in Amazonia (as seed dispersal agents, herbivores, predators) but there are relatively few detailed studies from areas that have not been affected by human activities (e.g., hunting, logging). Yet, such information is needed to evaluate effects of humans elsewhere. We used camera traps to sample medium to large-sized terrestrial mammals at a site in lowland forests of eastern Ecuador, one of the most biologically rich areas in the world. We deployed cameras on two study plots in terra firme forest at Tiputini Biodiversity Station. Sixteen cameras were arranged 200 m apart in a 4 × 4 grid on each plot. Cameras were operated for  60 days in January-March, 2014-2017, for a total of 3,707 and 3,482 trap-days on the two plots (Harpia, Puma). A total of 28 species were recorded; 26 on Harpia and 25 on Puma. Number of species recorded each year was slightly greater on Harpia whereas overall capture rates (images/100 trap-days) were higher on Puma. Although most species were recorded on each plot, differences in capture rates meant that yearly samples on a given plot were more similar to each other than to samples on the other plot. Images of most species showed a clumped distribution pattern on each plot; Panthera onca was the only species that did not show a clumped distribution on either plot. Images at a given camera location showed no evidence of autocorrelation with numbers of images at nearby camera locations, suggesting that species were responding to small-scale differences in habitat conditions. A redundancy analysis showed that environmental features within 50 or 100 m of camera locations (e.g., elevation, variation in elevation, slope, distance to streams) accounted for significant amounts of variation in distribution patterns of species. Composition and relative importance based on capture rates were very similar to results from cameras located along trails at the same site; similarities decreased at increasing spatial scales based on comparisons with results from other sites in Ecuador and Peru.

Spatial patterns of fish standing biomass across Brazilian reefs.

A large fish-count dataset from the Brazilian province was used to describe spatial patterns in standing biomass and test if total biomass, taxonomic and functional trophic structure vary across nested spatial scales. Taxonomic and functional structure varied more among localities and sites than among regions. Total biomass was generally higher at oceanic islands and remote or protected localities along the coast. Lower level carnivores comprised a large part of the biomass at almost all localities (mean of 44%), zooplanktivores never attained more than 14% and omnivores were more representative of subtropical reefs and oceanic islands (up to 66% of total biomass). Small and large herbivores and detritivores varied greatly in their contribution to total biomass, with no clear geographical patterns. Macrocarnivores comprised less than 12% of the biomass anywhere, except for two remote localities. Top predators, such as sharks and very large groupers, were rare and restricted to a few reefs, suggesting that their ecological function might have already been lost in many Brazilian reefs.

Effects of hydrocarbon pollution in the structure of macrobenthic assemblages from two large estuaries in Brazil.

Changes in the structure of benthic macrofauna and its relationship with hydrocarbon contamination were determined at different spatial scales in sublittoral sediments of two large estuaries in Brazil. Guanabara Bay (GB) is a heavily polluted estuary due to the presence of a large industrial complex and high demographic density. Laranjeiras Bay (LB) lies in an Environmental Protection Area and can still be considered as preserved from human activities. Despite some spatial differences within each bay, the PAHs concentrations were significantly and consistently higher in GB, with values generally above the threshold effect levels. No signs of hydrocarbon contamination were observed in LB. Macrofauna abundance, diversity and overall assemblage structure were largely different between bays. Canonical analysis of principal coordinates (CAP), used to model the relationship between macrofauna and PAHs levels, indicated that this class of hydrocarbons is the main structuring factor of soft-bottom assemblages in both bays.

Ecological and evolutionary consequences of tri-trophic interactions: Spatial variation and effects of plant density.

PREMISE OF STUDY: The factors driving variation in species interactions are often unknown, and few studies have made a link between changes in interactions and the strength of selection. METHODS: We report on spatial variation in functional responses by a seed predator (SP) and its parasitic wasps associated with the herb Ruellia nudiflora. We assessed the influence of plant density on consumer responses and determined whether density effects and spatial variation in functional responses altered natural selection by these consumers on the plant. We established common gardens at two sites in Yucatan, Mexico, and planted R. nudiflora at two densities in each garden. We recorded fruit output and SP and parasitoid attack; calculated relative fitness (seed number) under scenarios of three trophic levels (accounting for SP and parasitoid effects), two trophic levels (accounting for SP but not parasitoid effects), and one trophic level (no consumer effects); and compared selection strength on fruit number under these scenarios across sites and densities. KEY RESULTS: There was spatial variation in SP recruitment, whereby the SP functional response was negatively density-dependent at one site but density-independent at the other; parasitoid responses were density-independent and invariant across sites. Site variation in SP attack led, in turn, to differences in SP selection on fruit output, and parasitoids did not alter SP selection. There were no significant effects of density at either site. CONCLUSIONS: Our results provide a link between consumer functional responses and consumer selection on plants, which deepens our understanding of geographic variation in the evolutionary outcomes of multitrophic interactions.

Floral Visitors of Three Asteraceae Species in a Xeric Environment in Central Mexico.

We describe the spatial variation in the structure and composition of the communities of insects visiting the inflorescences of Flaveria ramosissima Klatt, Florestina pedata (Cav.) Cass., and Parthenium bipinnatifidum (Ort.) Rollins (Asteraceae) in a xeric environment in Central Mexico. Inflorescences of the three Asteraceae were visited by a total of 96 species of Hymenoptera, Diptera, Lepidoptera, Coleoptera, and Hemiptera. Total species richness of floral visitors to the three Asteraceae and total abundance of insects of Fl. pedata and P. bipinnatifidum did not differ between low and high vegetation cover sites. Total abundance of insects visiting the inflorescences of F. ramosissima and abundance of Hymenoptera in all three Asteraceae were higher at the low vegetation coverage (LVC) site than at the high vegetation coverage (HVC) one. Diversity of insects of Fl. pedata and P. bipinnatifidum was higher at the HVC site. However, in F. ramosissima diversity was higher at the LVC site. The communities of insects of each Asteraceae were dissimilar between sites. These differences can be attributed to variation in the abundance of Lepidophora (Diptera: Bombyliidae), Miridae (Hemiptera), Melyridae (Coleoptera), Tiphiidae (Hymenoptera), Myrmecocystus mexicanus Wesmael, and Dorymyrmex grandulus (Forel) (Hymenoptera: Formicidae). The first three insect groups were sensitive to LVC, high temperature, and low humidity, whereas the last three tolerated those same environmental conditions. Changes in temperature, humidity, and resources associated with vegetation coverage seem to differentially affect each species of floral visitors of the three Asteraceae species studied.

Distribution and contamination of heavy metals in surface sediments of the Daya Bay and adjacent shelf, China.

Heavy metal (arsenic (As), cadmium (Cd), chromium (Cr), copper (Cu), mercury (Hg), lead (Pb), and zinc (Zn)) concentrations from the Daya Bay and adjacent shelf were determined to evaluate their levels and spatial distributions. The measured concentrations ranged from 1.94-13.67mg/kg for As, 0.03-0.13mg/kg for Cd, 10-85mg/kg for Cr, 1-39.5mg/kg for Cu, 0.01-0.09mg/kg for Hg, 11-56mg/kg for Pb, and 13-125mg/kg for Zn. The spatial distributions exhibited a gradual decrease from west to east, and the concentrations of the seven heavy metals met the China Marine Sediment Quality criteria. Both metal enrichment factor (EF) and geo-accumulation index (Igeo) values showed that Cd, Cr, Cu, Hg, and Zn were not at pollution levels in the region. Multivariate analysis (PCA) revealed that lithogenic factors dominated the distribution of most of the metals, whereas As and Hg were clearly influenced by anthropogenic input.

Tamanho ótimo de parcela para avaliação da massa e diâmetro de cabeças de brócolis / Optimum plot size for evaluating the mass and diameter of broccoli heads

RESUMO: O objetivo deste trabalho foi determinar o tamanho ótimo de parcela (Xo), por amostragem na área total e nas frações de áreas, a fim de avaliar a massa e o diâmetro de cabeças de brócolis. Em campo, foram demarcadas 27 filas do híbrido BRO 68(r). Cada planta foi considerada como sendo uma unidade experimental básica (UEB). Para fins de análise, cada fila foi considerada como sendo um ensaio em branco com 100 UEB. Para os resultados das 27 filas, obtiveram-se os valores: mínimo, máximo, média, desvio padrão, CV, intervalo de confiança, o tamanho de amostra (número de filas) para estimar o Xo e para estimar a média. O tamanho ótimo de parcela para avaliar a massa e diâmetro de cabeças de brócolis é igual a cinco unidades experimentais básicas (plantas).

ABSTRACT: The objective of this study was to determine the optimum plot size by sampling the total area and the fractions' areas in order to evaluate the mass and diameter of broccoli heads. In the field, 27 rows of hybrid BRO 68(r) were demarcated. Each plant was considered as an experimental basic unit (UEB). For analysis purposes, each row was regarded as being one blank test on 100 UEB. For the results of 27 rows yielded values: minimum, maximum, average, standard deviation, CV, confidence interval, the sample size (number of rows) to estimate Xo and to estimate the mean. The optimum plot size to evaluate the mass and diameter of broccoli heads equals five basic experimental units (plants).

Tamanho ótimo de parcela para avaliação da massa e diâmetro de cabeças de brócolis / Optimum plot size for evaluating the mass and diameter of broccoli heads

O objetivo deste trabalho foi determinar o tamanho ótimo de parcela (Xo), por amostragem na área total e nas frações de áreas, a fim de avaliar a massa e o diâmetro de cabeças de brócolis. Em campo, foram demarcadas 27 filas do híbrido BRO 68(r). Cada planta foi considerada como sendo uma unidade experimental básica (UEB). Para fins de análise, cada fila foi considerada como sendo um ensaio em branco com 100 UEB. Para os resultados das 27 filas, obtiveram-se os valores: mínimo, máximo, média, desvio padrão, CV, intervalo de confiança, o tamanho de amostra (número de filas) para estimar o Xo e para estimar a média. O tamanho ótimo de parcela para avaliar a massa e diâmetro de cabeças de brócolis é igual a cinco unidades experimentais básicas (plantas).(AU)

The objective of this study was to determine the optimum plot size by sampling the total area and the fractions' areas in order to evaluate the mass and diameter of broccoli heads. In the field, 27 rows of hybrid BRO 68(r) were demarcated. Each plant was considered as an experimental basic unit (UEB). For analysis purposes, each row was regarded as being one blank test on 100 UEB. For the results of 27 rows yielded values: minimum, maximum, average, standard deviation, CV, confidence interval, the sample size (number of rows) to estimate Xo and to estimate the mean. The optimum plot size to evaluate the mass and diameter of broccoli heads equals five basic experimental units (plants).(AU)