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1.
Nanotechnology ; 35(49)2024 Sep 18.
Article in English | MEDLINE | ID: mdl-39292051

ABSTRACT

Emerging fields of quantum technologies and biomedical applications demand pure nanodiamonds (NDs) with well-defined surface chemistry. Therefore, an inexpensive, scalable and eco-friendly ND surface purification technology is required. In this study, we report our method, salt-coated air oxidation (SCAO) thermal annealing, to achieve uniform purification of a ND surface without the loss of diamond material. A photoluminescence (PL) spectroscopy quality control method is proposed to evaluate the degree of purification. The presence of an isoemission point in the set of nitrogen vacancy (NV) center PL spectra, obtained through the photochromic effect, is examined as a surface purity indicator. The ratio of the NV centers in NDs after the SCAO treatment was determined by decomposing the PL spectra using the non-negative matrix factorization technique.

2.
ACS Nano ; 18(34): 23354-23364, 2024 Aug 27.
Article in English | MEDLINE | ID: mdl-39145421

ABSTRACT

There has been extensive activity exploring the doping of semiconducting two-dimensional (2D) transition metal dichalcogenides in order to tune their electronic and magnetic properties. The outcome of doping depends on various factors, including the intrinsic properties of the host material, the nature of the dopants used, their spatial distribution, as well as their interactions with other types of defects. A thorough atomic-level analysis is essential to fully understand these mechanisms. In this work, the vanadium-doped WSe2 monolayer grown by molecular beam epitaxy is investigated using four-dimensional scanning transmission electron microscopy (4D-STEM). Through center-of-mass-based reconstruction, atomic-scale maps are produced, allowing the visualization of both the electric field and the electrostatic potential around individual V atoms. To provide quantitative insights, these results are successfully compared to multislice image simulations based on ab initio calculations, accounting for lens aberrations. Finally, a negative charge around the V dopants is detected as a drop in the electrostatic potential, unambiguously demonstrating that 4D-STEM can be used to detect and to accurately analyze single-dopant charge states in semiconducting 2D materials.

3.
ArXiv ; 2024 Jul 24.
Article in English | MEDLINE | ID: mdl-39108291

ABSTRACT

Proteins' fuzziness are features for communicating changes in cell signaling instigated by binding with secondary messengers, such as calcium ions, associated with the coordination of muscle contraction, neurotransmitter release, and gene expression. Binding with the disordered parts of a protein, calcium ions must balance their charge states with the shape of calcium-binding proteins and their versatile pool of partners depending on the circumstances they transmit, but it is unclear whether the limited experimental data available can be used to train models to accurately predict the charges of calcium-binding protein variants. Here, we developed a chemistry-informed, machine-learning algorithm that implements a game theoretic approach to explain the output of a machine-learning model without the prerequisite of an excessively large database for high-performance prediction of atomic charges. We used the ab initio electronic structure data representing calcium ions and the structures of the disordered segments of calcium-binding peptides with surrounding water molecules to train several explainable models. Network theory was used to extract the topological features of atomic interactions in the structurally complex data dictated by the coordination chemistry of a calcium ion, a potent indicator of its charge state in protein. With our designs, we provided a framework of explainable machine learning model to annotate atomic charges of calcium ions in calcium-binding proteins with domain knowledge in response to the chemical changes in an environment based on the limited size of scientific data in a genome space.

4.
Proc Natl Acad Sci U S A ; 121(13): e2313897121, 2024 Mar 26.
Article in English | MEDLINE | ID: mdl-38466875

ABSTRACT

Although the last several decades have seen a dramatic reduction in emissions from vehicular exhaust, nonexhaust emissions (e.g., brake and tire wear) represent an increasingly significant class of traffic-related particulate pollution. Aerosol particles emitted from the wear of automotive brake pads contribute roughly half of the particle mass attributed to nonexhaust sources, while their relative contribution to urban air pollution overall will almost certainly grow coinciding with vehicle fleet electrification and the transition to alternative fuels. To better understand the implications of this growing prominence, a more thorough understanding of the physicochemical properties of brake wear particles (BWPs) is needed. Here, we investigate the electrical properties of BWPs as emitted from ceramic and semi-metallic brake pads. We show that up to 80% of BWPs emitted are electrically charged and that this fraction is strongly dependent on the specific brake pad material used. A dependence of the number of charges per particle on charge polarity and particle size is also demonstrated. We find that brake wear produces both positive and negative charged particles that can hold in excess of 30 elementary charges and show evidence that more negative charges are produced than positive. Our results will provide insights into the currently limited understanding of BWPs and their charging mechanisms, which potentially have significant implications on their atmospheric lifetimes and thus their relevance to climate and air quality. In addition, our study will inform future efforts to remove BWP emissions before entering the atmosphere by taking advantage of their electric charge.

5.
Materials (Basel) ; 17(5)2024 Mar 01.
Article in English | MEDLINE | ID: mdl-38473631

ABSTRACT

The formation of intrinsic point defects in the N-sublattice of semi-insulating Mg-doped GaN crystals grown by the ammonothermal method (SI AT GaN:Mg) was investigated for the first time. The grown-in defects produced by the displacement of nitrogen atoms were experimentally observed as deep traps revealed by the Laplace transform photoinduced transient spectroscopy in the compensated p-type crystals with the Mg concentrations of 6 × 1018 and 2 × 1019 cm-3 and resistivities of ~1011 Ωcm and ~106 Ωcm, respectively. In both kinds of materials, three closely located traps with activation energies of 430, 450, and 460 meV were revealed. The traps, whose concentrations in the stronger-doped material were found to be significantly higher, are assigned to the (3+/+) and (2+/+) transition levels of nitrogen vacancies as well as to the (2+/+) level of nitrogen split interstitials, respectively. In the material with the lower Mg concentration, a middle-gap trap with the activation energy of 1870 meV was found to be predominant. The results are confirmed and quantitatively described by temperature-dependent Hall effect measurements. The mechanism of nitrogen atom displacement due to the local strain field arising in SI AT GaN:Mg is proposed and the effect of the Mg concentration on the charge compensation is discussed.

6.
J Proteome Res ; 23(4): 1443-1457, 2024 04 05.
Article in English | MEDLINE | ID: mdl-38450643

ABSTRACT

We report the comparison of mass-spectral-based abundances of tryptic glycopeptides to fluorescence abundances of released labeled glycans and the effects of mass and charge state and in-source fragmentation on glycopeptide abundances. The primary glycoforms derived from Rituximab, NISTmAb, Evolocumab, and Infliximab were high-mannose and biantennary complex galactosylated and fucosylated N-glycans. Except for Evolocumab, in-source ions derived from the loss of HexNAc or HexNAc-Hex sugars are prominent for other therapeutic IgGs. After excluding in-source fragmentation of glycopeptide ions from the results, a linear correlation was observed between fluorescently labeled N-glycan and glycopeptide abundances over a dynamic range of 500. Different charge states of human IgG-derived glycopeptides containing a wider variety of abundant attached glycans were also investigated to examine the effects of the charge state on ion abundances. These revealed a linear dependence of glycopeptide abundance on the mass of the glycan with higher charge states favoring higher-mass glycans. Findings indicate that the mass spectrometry-based bottom-up approach can provide results as accurate as those of glycan release studies while revealing the origin of each attached glycan. These site-specific relative abundances are conveniently displayed and compared using previously described glycopeptide abundance distribution spectra "GADS" representations. Mass spectrometry data are available from the MAssIVE repository (MSV000093562).


Subject(s)
Immunoglobulin G , Tandem Mass Spectrometry , Humans , Glycosylation , Glycopeptides/analysis , Polysaccharides/chemistry , Ions
7.
Adv Sci (Weinh) ; 11(22): e2308814, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38475912

ABSTRACT

The silicon vacancy (SiV) center in diamond is drawing much attention due to its optical and spin properties, attractive for quantum information processing and sensing. Comparatively little is known, however, about the dynamics governing SiV charge state interconversion mainly due to challenges associated with generating, stabilizing, and characterizing all possible charge states, particularly at room temperature. Here, multi-color confocal microscopy and density functional theory are used to examine photo-induced SiV recombination - from neutral, to single-, to double-negatively charged - over a broad spectral window in chemical-vapor-deposition (CVD) diamond under ambient conditions. For the SiV0 to SiV- transition, a linear growth of the photo-recombination rate with laser power at all observed wavelengths is found, a hallmark of single photon dynamics. Laser excitation of SiV‒, on the other hand, yields only fractional recombination into SiV2‒, a finding that is interpreted in terms of a photo-activated electron tunneling process from proximal nitrogen atoms.

8.
Carbohydr Polym ; 330: 121776, 2024 Apr 15.
Article in English | MEDLINE | ID: mdl-38368092

ABSTRACT

The present work investigates the effects of nano-chitin with different charge, obtained by acid hydrolysis and TEMPO oxidation, on the structure and properties of borax crosslinked polyvinyl alcohol (PVA) hydrogels. In detail, nano-chitin prepared by acid hydrolysis (ACh) is positively charged (+28.8 mV). The electrostatic attraction between ACh and borax ions leads to a maximum tensile stress of composite hydrogel (ACh/PB), 54.25 KPa, 17 times of the borax crosslinked PVA (PB). In contrast, nano-chitin prepared by TEMPO-oxidation (TCh) shows negative charge (-59.0 mV). Due to the electrostatic repulsion with borax ions, the maximum tensile stress of composite hydrogel (TCh/PB) is only 9.25 KPa, a very limit reinforcing effect. However, TCh/PB showed better self-healing efficiency (96.0 %) as well as ionic conductivity (1.25 × 10-5 S/m). The present work shows that the charge state of the nano-chitin exerts great influence on the interaction with the crosslinking agent borax, therefore, affects the structure and properties of the final PVA composite hydrogels. The results could provide important information about making full use of nano-chitin as a reinforcement by adjusting its surface charge state.

9.
ACS Appl Mater Interfaces ; 16(5): 5779-5791, 2024 Feb 07.
Article in English | MEDLINE | ID: mdl-38270099

ABSTRACT

Exploring efficient and stable electrocatalysts for the bifunctional oxygen evolution reaction (OER) and oxygen reduction reaction (ORR) is vital to developing renewable energy technologies. However, due to the substantial and intricate design space associated with these bifunctional OER/ORR electrocatalysts, their development presents a formidable challenge, resulting in their cost-prohibitive nature in both experimental and computational studies. Herein, using the defect physics method, we systematically investigate the formation energies and bifunctional overpotential (ηBi) of 4d-transition-metal (4d-TM, 4d-TM = Zr, Nb, Mo, Ru, Rh, Pd, and Ag)-doped monolayer supercell g-C3N4 (4d-TM@C54N72) based on the density functional theory (DFT) calculations. Under N-rich and C-rich conditions, we find that the formation energies of RhN@C54N71 (Rh occupation N) and PdN@C54N71 (Pd occupation N) are smaller than that of other 4d-TMN@C54N71 (4d-TM occupation N site); for the 4d-TMint@C54N72 (4d-TM interstitial site occupation), the lowest-formation energy defects are Pdint@C54N72. These results indicate that they have better stabilities. Interestingly, for these formation energy lower systems, Pd0int@C54N72 (ηBi = 1.00 V) and Rh1+N@C54N71 (ηBi = 0.73 V) have ultralow overpotential and can be great candidates for bifunctional OER/ORR electrocatalysts. We find the reason is that adjusting the charge states of 4d-TM@C54N72 can tune the interaction strength between the oxygenated intermediates and the 4d-TM@C54N72, which plays a crucial role in the activity of reactions. Additionally, the data obtained through machine learning (ML) application suggest that the electronegativity (Nm) and bond length of 4d-TM and coordination atoms (dTM-OOH) are primary descriptors characterizing the OER and ORR activities, respectively. The charged defect tuning of the bifunctional OER/ORR activity for 4d-TM@C54N72 would enable electrocatalytic performance optimization and the development of potential electrocatalysts for renewable energy applications.

10.
J Colloid Interface Sci ; 656: 280-288, 2024 Feb 15.
Article in English | MEDLINE | ID: mdl-37995398

ABSTRACT

The charge state of surfaces in contact with aqueous electrolytes is crucial for the performance and stability of dielectric surfaces in general and lyophobic colloids in particular. Thus far the role of adsorbed molecular CO2 remained largely unexplored. The aim of the present investigation is to study the de-charging and re-charging for two model surfaces upon addition of CO2 and/or 1:1 electrolytes (NaCl, HCl) under precisely controlled boundary conditions up to millimolar concentrations of additives. Starting from the salt- and CO2-free state, the ζ-potential magnitudes drop linearly with the logarithm of the CO2-concentrations over several orders of magnitude in CO2-concentrations. Hydrophobic Polystyrene nearly fully discharges, hydrophilic SiO2 reveals a 60% charge reduction. From the surface specific effects of instead adding NaCl or HCl, we discriminate and parameterize empirically the relative contribution of three individual mechanisms for decreasing the ζ-potential magnitudes (screening, pH-driven charge regulation, dielectric charge regulation) combining during CO2-addition. Moreover, depending on the achieved CO2-induced de-charging, the behavior upon subsequent addition of NaCl and HCl switches between two limiting cases. Screening dominates for surfaces in the native state without CO2, but a significant re-charging is observed for surfaces conditioned under excess CO2-concentrations.

11.
bioRxiv ; 2023 Sep 29.
Article in English | MEDLINE | ID: mdl-37808720

ABSTRACT

Highly homologous ubiquitin-binding shuttle proteins UBQLN1, UBQLN2 and UBQLN4 differ in both their specific protein quality control functions and their propensities to localize to stress-induced condensates, cellular aggregates and aggresomes. We previously showed that UBQLN2 phase separates in vitro, and that the phase separation propensities of UBQLN2 deletion constructs correlate with their ability to form condensates in cells. Here, we demonstrated that full-length UBQLN1, UBQLN2 and UBQLN4 exhibit distinct phase behaviors in vitro. Strikingly, UBQLN4 phase separates at a much lower saturation concentration than UBQLN1. However, neither UBQLN1 nor UBQLN4 phase separates with a strong temperature dependence, unlike UBQLN2. We determined that the temperature-dependent phase behavior of UBQLN2 stems from its unique proline-rich (Pxx) region, which is absent in the other UBQLNs. We found that the short N-terminal disordered regions of UBQLN1, UBQLN2 and UBQLN4 inhibit UBQLN phase separation via electrostatics interactions. Charge variants of the N-terminal regions exhibit altered phase behaviors. Consistent with the sensitivity of UBQLN phase separation to the composition of the N-terminal regions, epitope tags placed on the N-termini of the UBQLNs tune phase separation. Overall, our in vitro results have important implications for studies of UBQLNs in cells, including the identification of phase separation as a potential mechanism to distinguish the cellular roles of UBQLNs, and the need to apply caution when using epitope tags to prevent experimental artifacts.

12.
Talanta ; 260: 124621, 2023 Aug 01.
Article in English | MEDLINE | ID: mdl-37149942

ABSTRACT

A detailed experimental characterization on the ion storage biases in an ion funnel trap, related to ion structure, charge state and RF voltage applied to the ion funnel trap, is reported by using both cytochrome C and ubiquitin samples. It was first observed experimentally that an unavoidable ion overflow would occur when the incoming ions exceeded the capacity of ion funnel trap. The conformers with extended structures would lose preferentially in the ion overflow process. Accordingly, a significant structural bias in the ion mobility spectrometry/time of flight mass spectrometry (IMS-TOF MS) spectrum was created, as the peak intensities for conformers with compact structures and extended structures would continuously increase and decrease, respectively, when the ion overflow time of the ion funnel trap was increased. Furthermore, the experimental results also showed that the effect of this ion structural bias was more significant when the RF voltage applied to the ion funnel trap was increased. In addition, an ion charge state bias in the ion funnel trap was also observed. The effect of the ion structural bias depends significantly on the specific charge state of the ions. For a given analyte, its lower charge state ions show a greater sensitivity to the ion structural bias than the higher charge state ones under the same ion funnel trap operating conditions. Therefore, it is extremely important to set a reasonable operation condition for the ion funnel trap to avoid ion storage biases in IMS-TOF MS.

13.
Nano Lett ; 23(4): 1514-1521, 2023 Feb 22.
Article in English | MEDLINE | ID: mdl-36730120

ABSTRACT

Excitons are quasi-particles composed of electron-hole pairs through Coulomb interaction. Due to the atomic-thin thickness, they are tightly bound in monolayer transition metal dichalcogenides (TMDs) and dominate their optical properties. The capability to manipulate the excitonic behavior can significantly influence the photon emission or carrier transport performance of TMD-based devices. However, on-demand and region-selective manipulation of the excitonic states in a reversible manner remains challenging so far. Herein, harnessing the coordinated effect of femtosecond-laser-driven atomic defect generation, interfacial electron transfer, and surface molecular desorption/adsorption, we develop an all-optical approach to manipulate the charge states of excitons in monolayer molybdenum disulfide (MoS2). Through steering the laser beam, we demonstrate reconfigurable optical encoding of the excitonic charge states (between neutral and negative states) on a single MoS2 flake. Our technique can be extended to other TMDs materials, which will guide the design of all-optical and reconfigurable TMD-based optoelectronic and nanophotonic devices.

14.
Molecules ; 28(3)2023 Jan 25.
Article in English | MEDLINE | ID: mdl-36770836

ABSTRACT

Due to the increasing pharmaceutical interest of oligonucleotides, for example in antisense therapy and vaccines, their analytical characterization is of fundamental importance due to their complex structure. For this purpose, mass spectrometry is a viable tool for structural studies of nucleic acids. Structural information regarding the primary sequence of a nucleic acid can reliably be gained via tandem mass spectrometry (MSMS) fragmentation. In this work, we present the characteristic fragmentation behavior of short-chain oligonucleotides (15-35 nucleotides) with respect to the collision-induced dissociation (CID) voltage used. The relationship and influence of the length of the oligonucleotide and its charge state is also discussed. The results presented here can be helpful for estimating the required fragmentation energies of short-chain oligonucleotides and their sequencing.


Subject(s)
Nucleic Acids , Oligonucleotides , Oligonucleotides/chemistry , Tandem Mass Spectrometry/methods , Nucleotides , Physical Phenomena , Spectrometry, Mass, Electrospray Ionization
15.
Chemphyschem ; 24(7): e202200746, 2023 04 03.
Article in English | MEDLINE | ID: mdl-36599672

ABSTRACT

The single alpha helix (SAH) is a recurring motif in biology. The consensus sequence has a di-block architecture that includes repeats of four consecutive glutamate residues followed by four consecutive lysine residues. Measurements show that the overall helicity of sequences with consensus E4 K4 repeats is insensitive to a wide range of pH values. Here, we use the recently introduced q-canonical ensemble, which allows us to decouple measurements of charge state and conformation, to explain the observed insensitivity of SAH helicity to pH. We couple the outputs from separate measurements of charge and conformation with atomistic simulations to derive residue-specific quantifications of preferences for being in an alpha helix and for the ionizable residues to be charged vs. uncharged. We find a clear preference for accommodating uncharged Glu residues within internal positions of SAH-forming sequences. The stabilities of alpha helical conformations increase with the number of E4 K4 repeats and so do the numbers of accessible charge states that are compatible with forming conformations of high helical content. There is conformational buffering whereby charge state heterogeneity buffers against large-scale conformational changes thus making the overall helicity insensitive to large changes in pH. Further, the results clearly argue against a single, rod-like alpha helical conformation being the only or even dominant conformation in the ensembles of so-called SAH sequences.


Subject(s)
Glutamic Acid , Lysine , Protein Conformation, alpha-Helical , Protein Conformation
16.
J Mass Spectrom ; 57(11): e4891, 2022 Nov.
Article in English | MEDLINE | ID: mdl-36328972

ABSTRACT

We report the effect of N2 gas-mixing in the xenon electron cyclotron resonance (ECR) plasma, and abundance-dependent novel, exciting and unusual trends of the isotope anomaly. The xenon plasma was produced using a 10 GHz all-permanent-magnet NANOGAN ECR ion source, and the charge state distributions of naturally abundant six stable xenon isotopes with and without N2 gas-mixing (at 25%, 50%, and 75%) were recorded. The intensity ratio of the heavier to lighter isotope, where the heavier isotope is less abundant, showed a clear signature of the isotope anomaly as explained by the linear Landau wave damping theory. Contrary to the theoretical prediction that the isotope anomaly should vanish with a relatively large fraction of the heavier isotope in mixed plasmas, the trends of intensity ratios observed in such cases are very unusual and have almost the mirror-symmetrical shapes of those trends recorded with less abundant heavier isotope. Further, the effect of relative mass difference on the isotope anomaly was also evidenced. The N2 gas-mixing of the xenon plasma at 25% and 50% shifted the entire charge state distribution toward the higher intensity side owing to the supply of additional electrons that caused high ionization efficiency. However, a prominent gas-mixing effect was observed at 75% of N2 mixing in the xenon plasma beyond the +7 charge state. The abundance-dependent unusual trends in isotope anomaly have been explained by considering different ionic temperatures, ion heating by the wave damping, and Coulomb scattering in the core of the plasma.


Subject(s)
Cyclotrons , Xenon , Electrons , Gases , Ions , Isotopes , Nitrogen
17.
ACS Nano ; 16(6): 9452-9460, 2022 Jun 28.
Article in English | MEDLINE | ID: mdl-35617052

ABSTRACT

Two-dimensional (2D) dilute magnetic semiconductors (DMSs) are attractive material platforms for applications in multifunctional nanospintronics due to the prospect of embedding controllable magnetic order within nanoscale semiconductors. Identifying candidate host material and dopant systems requires consideration of doping formation energies, magnetic ordering, and the tendency for dopants to form clustered domains. In this work, we consider the defect thermodynamics and the dilute magnetic properties across charge states of 2D-MoS2 and 2D-WS2 with Mn magnetic dopants as candidate systems for 2D-DMSs. Using hybrid density functional calculations, we study the magnetic and electronic properties of these systems across configurations with thermodynamically favorable defects: 2D-MoS2 doped with Mn atoms at sulfur site (MnS), at two Mo sites (2MnMo), on top of a Mo atom (Mn-top), and at a Mo site (MnMo). While the majority of the Mn-defect complexes provide trap states, MnMo and MnW are amphoteric, although previously predicted to be donor defects. The impact of cluster formation of these amphoteric defects on magnetic ordering is also considered; both MnMo-MnMo (2Mn2Mo) and MnW-MnW (2Mn2W) clusters are found to be stable in ferromagnetic (FM) ordering. Interestingly, we observed the defect charge state dependent magnetic behavior of 2Mn2Mo and 2Mn2W clusters in 2D-TMDs. We investigate that the FM coupling of 2Mn2Mo and 2Mn2W clusters is stable in only a neutral charge state; however, the antiferromagnetic (AFM) coupling is stable in the +1 charge state. 2Mn2Mo clusters provide shallow donor levels in AFM coupling and deep donor levels in FM coupling. 2Mn2W clusters lead to trap states in the FM and AFM coupling. We demonstrate the AFM to FM phase transition at a critical electron density nce = 3.5 × 1013 cm-2 in 2D-MoS2 and 2D-WS2. At a 1.85% concentration of Mn, we calculate the Curie temperature of 580 K in the mean-field approximation.

18.
Molecules ; 27(5)2022 Feb 22.
Article in English | MEDLINE | ID: mdl-35268570

ABSTRACT

In the recently introduced phenomenological diatomic molecular model imagining the clusters as certain constructions of pair interatomic chemical bonds, there are estimated specific (per atom) binding energies of small all-boron planar clusters Bn, n = 1-15, in neutral single-anionic and single-cationic charge states. The theoretically obtained hierarchy of their relative stability/formation probability correlates not only with results of previous calculations, but also with available experimental mass-spectra of boron planar clusters generated in process of evaporation/ablation of boron-rich materials. Some overestimation in binding energies that are characteristic of the diatomic approach could be related to differences in approximations made during previous calculations, as well as measurement errors of these energies. According to the diatomic molecular model, equilibrium binding energies per B atom and B-B bond lengths are expected within ranges 0.37-6.26 eV and 1.58-1.65 Å, respectively.

19.
Anal Bioanal Chem ; 414(5): 1933-1947, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34997251

ABSTRACT

Liquid chromatography (LC) coupled with tandem mass spectrometry (MS/MS) provides a simple and efficient means for the measurement of analytes in biological matrices with high selectivity and specificity. LC-MS/MS plays an important role in the pharmaceutical industry and biomedical research, but it requires analytes to be in an ionized form in order to be detected. This can pose a challenge for large molecules such as proteins and peptides, because they can exist in multiple charged forms, and this will reduce the total analyte signal by distributing it into multiple ion peaks with a different number of charges in a mass spectrum. In conventional LC-MS/MS analysis of such macromolecules, one charged form is selected as the precursor ion which is then fragmented by collision-induced dissociation (CID) in MS/MS to generate product ions, a process referred to as multiple-reaction monitoring (MRM). The MRM method minimizes interference from endogenous molecules within biological matrices that share the same molecular weight of the precursor ion, but at the expense of signal intensity as compared to precursor ion intensity. We describe here an approach to boost detection sensitivity and expand dynamic range in the quantitation of large molecules while maintaining analytical specificity using summation of MRM (SMRM) transitions and LC separation technique. Protein image from PDB-101 (PDB101.rscb.org).


Subject(s)
Chromatography, Liquid/methods , Tandem Mass Spectrometry/methods , Animals , Feasibility Studies , Limit of Detection , Rats , Rats, Sprague-Dawley
20.
Nano Lett ; 22(4): 1812-1817, 2022 Feb 23.
Article in English | MEDLINE | ID: mdl-34890208

ABSTRACT

Control of a single ionic charge state by altering the number of bound electrons has been considered as an ultimate testbed for atomic charge-induced interactions and manipulations, and such subject has been studied in artificially deposited objects on thin insulating layers. We demonstrate that an entire layer of controllable atomic charges on a periodic lattice can be obtained by cleaving metallic Co1/3NbS2, an intercalated transition metal dichalcogenide. We identified a metastable charge state of Co with a different valence and manipulated atomic charges to form a linear chain of the metastable charge state. Density functional theory investigation reveals that the charge state is stable due to a modified crystal field at the surface despite the coupling between NbS2 and Co via a1g orbitals. The idea can be generalized to other combinations of intercalants and base matrices, suggesting that they can be a new platform to explore single-atom-operational 2D electronics/spintronics.

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