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1.
J Wildl Dis ; 60(4): 806-817, 2024 Oct 01.
Article in English | MEDLINE | ID: mdl-39374940

ABSTRACT

Soft ticks in the genus Ornithodoros occur throughout the Mojave Desert in southern Nevada, southeastern California, and parts of southwestern Utah and northwestern Arizona, USA, and are frequently observed parasitizing Mojave desert tortoises (Gopherus agassizii). However, limited research exists examining the relationship between ticks and desert tortoises. Mojave desert tortoises are listed as threatened by the US Fish and Wildlife Service, and as such, their populations are monitored and individual tortoise health is routinely assessed. These health assessments document the presence and abundance of ticks present on tortoises, but detailed examination of the relationship between ticks and tortoise health has been lacking. This study analyzed the relationship between tick presence and desert tortoise health assessments as a function of season, location, age (adult vs. juvenile), foraging behavior, evidence of clinical signs of disease, body condition score, and sex. Our results indicate that more ticks were found on tortoises in the summer than in any other season. Ticks were observed more frequently on captive tortoises versus wild tortoises, and more ticks were likely to be present on adult tortoises than on juveniles. Ticks were also more likely to be observed on tortoises that lacked evidence of foraging and on tortoises with observed clinical signs of disease. These findings provide valuable insights into the biology of ticks in relation to tortoises that may be useful for management of both captive and free-living threatened tortoise populations where ticks are detected. Our study also may improve understanding of potential tick-borne disease dynamics in the Mojave desert tortoise habitat, including Borrelia sp. carried by Ornithodoros ticks, which cause tick-borne relapsing fever in people.


Subject(s)
Ornithodoros , Tick Infestations , Turtles , Animals , Turtles/parasitology , Tick Infestations/veterinary , Tick Infestations/epidemiology , Female , Male , Seasons , Animals, Wild , Nevada/epidemiology , Arizona/epidemiology
2.
West J Emerg Med ; 25(5): 758-766, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39319807

ABSTRACT

Introduction: The United States lacks a national interfacility patient transfer coordination system. During the coronavirus 2019 (COVID-19) pandemic, many hospitals were overwhelmed and faced difficulties transferring sick patients, leading some states and cities to form transfer centers intended to assist sending facilities. In this study we aimed to explore clinician experiences with newly implemented transfer coordination centers. Methods: This mixed-methods study used a brief national survey along with in-depth interviews. The American College of Emergency Physicians Emergency Medicine Practice Research Network (EMPRN) administered the national survey in March 2021. From September-December 2021, semi-structured qualitative interviews were conducted with administrators and rural emergency clinicians in Arizona and New Mexico, two states that started transfer centers during COVID-19. Results: Among 141 respondents (of 765, 18.4% response rate) to the national EMPRN survey, only 30% reported implementation or expansion of a transfer coordination center during COVID-19. Those with new transfer centers reported no change in difficulty of patient transfers during COVID-19 while those without had increased difficulty. The 17 qualitative interviews expanded upon this, revealing four major themes: 1) limited resources for facilitating transfers even before COVID-19; 2) increased number of and distance to transfer partners during the COVID-19 pandemic; 3) generally positive impacts of transfer centers on workflow, and 4) the potential for continued use of centers to facilitate transfers. Conclusion: Transfer centers may have offset pandemic-related transfer challenges brought on by the COVID-19 pandemic. Clinicians who frequently need to transfer patients may particularly benefit from ongoing access to such transfer coordination services.


Subject(s)
COVID-19 , Patient Transfer , Humans , COVID-19/epidemiology , Emergency Service, Hospital/organization & administration , SARS-CoV-2 , Pandemics , Arizona/epidemiology , Qualitative Research , United States/epidemiology , Interviews as Topic , Surveys and Questionnaires , New Mexico/epidemiology
3.
Transplant Proc ; 56(7): 1545-1551, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39179497

ABSTRACT

BACKGROUND: Delayed graft function (DGF) is a common post-transplant event associated with increased resource utilization. As a center with experience in DGF, we aimed to assess differences in readmissions and post-transplant outcomes between patients with and without DGF. METHODS: This was a retrospective review of deceased donor kidney transplant recipients at Mayo Clinic Arizona between 2015 and 2020. Recipients with at least one early readmission following kidney transplantation were included in the study. Two groups were identified: (1) recipients with DGF who required early readmission and (2) recipients without DGF who required early readmission. RESULTS: Among recipients with DGF, 43.9% (n = 405) required early readmission compared to 29.1% (n = 179) without DGF (P < .0001). There were no differences in the initial hospital length of stay (P = .08), and most recipients in both groups only required a single readmission (61.7% vs 72.1%, P = .02). Recipients with DGF were more likely to have ≥2 readmissions (P = .02) and a higher total readmission rate (P = .006). Recipients with DGF who required readmission also required more outpatient clinic visits (P = .003). When comparing recipients with and without DGF who required readmission, there were no differences in patient (P = .22) or death-censored (P = .72) graft survival. When comparing patients with and without DGF requiring one versus ≥2 readmissions, there were no differences in patient survival (P = .15), however patients with DGF and ≥2 readmissions had lower death-censored graft survival (P = .001). CONCLUSIONS: Recipients with DGF are at increased risk of readmission. Transplant center-level changes to reduce readmissions and infections could have an important impact on DGF outcomes.


Subject(s)
Delayed Graft Function , Kidney Transplantation , Patient Readmission , Humans , Patient Readmission/statistics & numerical data , Delayed Graft Function/etiology , Retrospective Studies , Male , Female , Middle Aged , Adult , Arizona/epidemiology , Graft Survival , Risk Factors , Length of Stay , Treatment Outcome
4.
Sleep Health ; 10(5): 590-593, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39127607

ABSTRACT

OBJECTIVES: In this study, we explore the relationship between political party affiliation and sleep quality since the COVID-19 pandemic. METHODS: We analyze online survey data collected for a sample of adult residents of Arizona in February and March 2023 (N = 922). We fit ordered-logistic regression models to examine how party affiliation and changes to one's personal life due to the COVID-19 pandemic are associated with the self-reported frequency of sleep difficulty. RESULTS: Compared to Republicans, Democrats and Independents report significantly worse sleep quality, net of the influence of sociodemographic controls. Additionally, having experienced major changes to one's personal life due to the COVID-19 pandemic is significantly associated with more frequent trouble sleeping for Democrats and Independents, but not for Republicans. CONCLUSIONS: We document a partisan divide in sleeping patterns among adults in a swing state and highlight an underappreciated factor contributing to sleep health amidst heightened political polarization.


Subject(s)
COVID-19 , Politics , Sleep Quality , Humans , Arizona/epidemiology , Male , Adult , Female , Middle Aged , COVID-19/epidemiology , Young Adult , Surveys and Questionnaires , Aged , Adolescent
6.
Front Public Health ; 12: 1418681, 2024.
Article in English | MEDLINE | ID: mdl-39131575

ABSTRACT

Wastewater-based epidemiology (WBE) is an environmental approach to monitor community health through the analysis of sewage. The COVID-19 pandemic catalyzed scientists and public health professionals to revisit WBE as a tool to optimize resource allocation to mitigate disease spread and prevent outbreaks. Some studies have highlighted the value of WBE programs that coordinate with public health professionals; however, the details necessary for implementation are not well-characterized. To respond to this knowledge gap, this article documents the framework of a successful WBE program in Arizona, titled Wastewater Analysis for Tactical Epidemiological Response Systems (WATERS), detailing the developed structure and methods of communication that enabled public health preparedness and response actions. This communication illustrates how program operations were employed to reduce outbreak severity. The structure outlined here is customizable and may guide other programs in the implementation of WBE as a public health tool.


Subject(s)
COVID-19 , Public Health , Wastewater , Humans , COVID-19/epidemiology , COVID-19/prevention & control , Arizona/epidemiology , Wastewater-Based Epidemiological Monitoring , SARS-CoV-2
7.
J Wildl Dis ; 60(4): 1016-1020, 2024 Oct 01.
Article in English | MEDLINE | ID: mdl-39041241

ABSTRACT

Susceptibility of free-ranging US wildlife to SARS-CoV-2 infection has been documented. Nasal or oral swabs and blood from 337 wild mammals (31 species) in Arizona USA, tested for antibodies and by reverse-transcription PCR, did not reveal evidence of SARS-CoV-2. Broader surveillance efforts are necessary to understand the role of wildlife.


Subject(s)
Animals, Wild , COVID-19 , Mammals , SARS-CoV-2 , Animals , Arizona/epidemiology , COVID-19/veterinary , COVID-19/epidemiology , Mammals/virology , Antibodies, Viral/blood
8.
Clin Toxicol (Phila) ; 62(8): 526-532, 2024 Aug.
Article in English | MEDLINE | ID: mdl-39051715

ABSTRACT

INTRODUCTION: Rattlesnake (Crotalus spp., Sistrurus spp.) bites in the southwestern United States are associated with significant morbidity. This study aims to describe 25 years of rattlesnake encounters reported to the Arizona Poison and Drug Information Center to identify vulnerable populations and circumstances where encounters occur to create public education to reduce future bites. METHODS: Cases of suspected rattlesnake encounters in Arizona reported to the Arizona Poison and Drug Information Center between 1999 and 2023 were analyzed to identify populations and circumstances associated with encounters. RESULTS: A total of 3,808 cases were analyzed overall and by age subgroups. Most encounters occurred in men (69.9%), during the evening (16:00-21:59; 49.2%), in summer (41.9%), and close to home (38.2%). Most bites occurred to the lower extremity (51%). Children 0 to 12-years-old have more encounters than those 13-years-old and older in rural zip codes (27.7% versus 14.8%; P = 0.005), during spring (31.8% versus 22.3%; P = 0.0005), and during the evening (64.4% versus 48.1%; P < 0.001). DISCUSSION: Rattlesnakes are encountered when rattlesnake and human behavior patterns overlap. Many people spend time outside during evening hours in the summer, and valuable resources like food, water, and shelter can be found near houses where humans spend much of their time. Most age groups have similar encounter circumstances but encounters among children 0 to 12-years-old differ in time of day, season, and urbanization level than encounters of those 13-years-old and older. Limitations of this study include underreporting of encounters, incomplete case details, potential reporting bias, potential snake misidentification, and geographic coverage of the poison center. CONCLUSION: Prevention of rattlesnake bites by reducing encounters is the most effective way to reduce suffering and healthcare costs. Future steps include creating and disseminating targeted public health education using the data collected.


Subject(s)
Crotalus , Poison Control Centers , Snake Bites , Humans , Arizona/epidemiology , Child , Male , Child, Preschool , Adolescent , Infant , Female , Adult , Young Adult , Middle Aged , Poison Control Centers/statistics & numerical data , Animals , Snake Bites/epidemiology , Snake Bites/therapy , Infant, Newborn , Aged , Seasons
9.
Sr Care Pharm ; 39(8): 291-299, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-39080867

ABSTRACT

Background The Southern Arizona VA Health Care System (SAVAHCS) implemented a delirium prevention and treatment protocol in 2019. Objective The primary objective of this study was to determine if the implementation of a delirium protocol influenced deliriogenic medication use in hospitalized geriatric veterans. The secondary objectives were to compare the rates of delirium diagnosis, hospital length-of-stay, and rates of newly started deliriogenic medications during admission pre- and post-protocol. Methods This study was a retrospective, secondary data analysis study. Veterans 65 years of age and older who were admitted to an inpatient medical ward at the SAVAHCS for 24 hours or more between January 1, 2018 and December 31, 2018 (pre-protocol) or January 1, 2021 and December 31, 2021 (post-protocol) were included. Patients were excluded if they had a diagnosis of alcohol or benzodiazepine withdrawal upon admission. Results A total of 5491 patients were included in this study; 2940 (53.5%) in the pre-protocol group and 2551 (46.5%) in the post-protocol group. Patients received at least one deliriogenic medication during their admission in the post-protocol group (36.2%) compared with the pre-protocol group (34.1%), but there was no statistically significant difference (P = 0.098). There were also no significant differences in the rates of documentation of delirium as a diagnosis at discharge, hospital length-of-stay, or the rates of newly started deliriogenic medications during admission between the groups. Conclusion Implementation of a delirium prevention and treatment protocol at the SAVAHCS did not significantly impact the use of deliriogenic medications in hospitalized geriatric veterans.


Subject(s)
Delirium , Hospitalization , Veterans , Humans , Delirium/drug therapy , Delirium/diagnosis , Aged , Retrospective Studies , Male , Female , Aged, 80 and over , Hospitalization/statistics & numerical data , Length of Stay , Arizona/epidemiology , Clinical Protocols , United States/epidemiology
10.
J Zoo Wildl Med ; 55(2): 471-478, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38875205

ABSTRACT

Through collaborative efforts, One Health partners have responded to outbreaks of COVID-19 among animals, including those in human care at zoos. Zoos have been faced with numerous challenges, including the susceptibility of many mammalian species, and therefore the need to heighten biosecurity measures rapidly. Robust One Health collaborations already exist in Arizona to address endemic and emerging zoonoses, but these have rarely included zoos. The pandemic shed light on this, and Arizona subsequently expanded its SARS-CoV-2 surveillance efforts to include zoo animals. Testing and epidemiologic support was provided to expedite the detection of and response to zoonotic SARS-CoV-2 infection in zoo animals, as well as to understand possible transmission events. Resulting from this program, SARS-CoV-2 was detected from a rectal swab collected from an 8-yr-old squirrel monkey (Saimiri sciureus) from a zoo in Southern Arizona. The animal had rapidly become ill with nonrespiratory symptoms and died in July 2022. Genomic sequencing from the swab revealed mutations consistent with the Omicron (BA.2) lineage. An epidemiologic investigation identified an animal caretaker in close proximity to the affected squirrel monkey who tested positive for COVID-19 the same day the squirrel monkey died. Critical One Health partners provided support to the zoo through engagement of local, state, and federal agencies. Necropsy and pathologic evaluation showed significant necrotizing colitis; the overall clinical and histopathological findings did not implicate SARS-CoV-2 infection alone as a causal or contributing factor in the squirrel monkey's illness and death. This report documents the first identification of SARS-CoV-2 in a squirrel monkey and highlights a successful and timely One Health investigation conducted through multisectoral collaboration.


Subject(s)
Animals, Zoo , COVID-19 , Monkey Diseases , One Health , SARS-CoV-2 , Saimiri , Animals , Saimiri/virology , COVID-19/veterinary , COVID-19/epidemiology , COVID-19/virology , COVID-19/diagnosis , Arizona/epidemiology , SARS-CoV-2/isolation & purification , Monkey Diseases/virology , Monkey Diseases/epidemiology , Monkey Diseases/diagnosis
11.
Ann Epidemiol ; 96: 48-52, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38880361

ABSTRACT

BACKGROUND: Hepatocellular carcinoma (HCC) is a highly lethal cancer with few treatment options available to patients. Most HCC cases in Arizona, a state with a high proportion of Hispanic adults, have not been included in recent reports of HCC incidence. This study describes trends in HCC incidence and stage at diagnosis among Arizona residents between 2009-2017 and reports on racial and ethnic disparities for these outcomes. METHODS: The Arizona Cancer Registry was used to identify Arizonans aged 19 or older diagnosed with liver cell carcinoma diagnosed between 2009-2017. A total of 5043 cases were examined. Adjusted annual and 3-year HCC incidence rates (per 100,000) were examined for non-Hispanic White (NHW) and Hispanic adults. RESULTS: The total age-adjusted HCC incidence rate increased significantly between 2009-2012 and then declined significantly between 2012-2017. Across nearly all years, age-adjusted HCC incidence in Hispanic adults was twice that of NHW adults. Hispanic adults were more likely to be diagnosed at a later stage across all time periods. The disparity in 3-year age-adjusted HCC incidence rate between NHW and Hispanic adults decreased between 2009-2017. CONCLUSION: Whe total age-adjusted HCC incidence rate increased significantly between 2009-2012 and then declined significantly between 2012-2017. Across nearly all years, age-adjusted HCC incidence in Hispanic adults was twice that of NHW adults. Hispanic adults were more likely to be diagnosed at a later stage across all time periods. The disparity in 3-year age-adjusted HCC incidence rate between NHW and Hispanic adults decreased between 2009-2017.


Subject(s)
Carcinoma, Hepatocellular , Hispanic or Latino , Liver Neoplasms , White People , Humans , Arizona/epidemiology , Liver Neoplasms/epidemiology , Liver Neoplasms/ethnology , Female , Male , Carcinoma, Hepatocellular/ethnology , Carcinoma, Hepatocellular/epidemiology , Incidence , Hispanic or Latino/statistics & numerical data , Middle Aged , Adult , Aged , White People/statistics & numerical data , Health Status Disparities , Registries , Young Adult , Aged, 80 and over
12.
Front Public Health ; 12: 1357908, 2024.
Article in English | MEDLINE | ID: mdl-38883190

ABSTRACT

Epidemiological models-which help us understand and forecast the spread of infectious disease-can be valuable tools for public health. However, barriers exist that can make it difficult to employ epidemiological models routinely within the repertoire of public health planning. These barriers include technical challenges associated with constructing the models, challenges in obtaining appropriate data for model parameterization, and problems with clear communication of modeling outputs and uncertainty. To learn about the unique barriers and opportunities within the state of Arizona, we gathered a diverse set of 48 public health stakeholders for a day-and-a-half forum. Our research group was motivated specifically by our work building software for public health-relevant modeling and by our earnest desire to collaborate closely with stakeholders to ensure that our software tools are practical and useful in the face of evolving public health needs. Here we outline the planning and structure of the forum, and we highlight as a case study some of the lessons learned from breakout discussions. While unique barriers exist for implementing modeling for public health, there is also keen interest in doing so across diverse sectors of State and Local government, although issues of equal and fair access to modeling knowledge and technologies remain key issues for future development. We found this forum to be useful for building relationships and informing our software development, and we plan to continue such meetings annually to create a continual feedback loop between academic molders and public health practitioners.


Subject(s)
Public Health , Arizona/epidemiology , Humans , Software , Stakeholder Participation , Models, Theoretical
13.
Am J Med ; 137(10): 951-957, 2024 Oct.
Article in English | MEDLINE | ID: mdl-38740320

ABSTRACT

BACKGROUND: Coccidioidomycosis within endemic regions is often undiagnosed because appropriate testing is not performed. A dashboard was developed to provide information about the prevalence of coccidioidomycosis throughout the year. METHODS: Banner Urgent Care Service has many clinics within Maricopa County, Arizona, a highly endemic region for coccidioidomycosis. All clinic visits and subset analyses for patients with International Classification of Diseases, Tenth Revision codes for pneumonia (J18.*) or erythema nodosum (L52) during 2018-2024 were included. Tabulated were daily frequencies of visits, pneumonia and erythema nodosum coding, coccidioidal testing, and test results. Banner Urgent Care Services' counts of monthly coccidioidomycosis diagnoses were compared with those of confirmed coccidioidomycosis cases reported to Maricopa County Department of Public Health. RESULTS: Monthly frequencies of urgent care coccidioidomycosis diagnoses strongly correlated with public health coccidioidomycosis case counts (r = 0.86). Testing frequency for coccidioidomycosis correlated with overall pneumonia frequency (r = 0.52). The proportion of pneumonia due to coccidioidomycosis varied between <5% and >45% within and between years. Coccidioidomycosis was a common cause of erythema nodosum (65%; 95% confidence interval, 45%-67%) and independent of pneumonia. Over half of Banner Urgent Care Services' coccidioidomycosis diagnoses were coded for neither pneumonia nor erythema nodosum. CONCLUSION: Data provided by the coccidioidomycosis dashboard can assist urgent care practitioners in knowing when coccidioidomycosis is prevalent in the community. Patients with exposure to endemic coccidioidomycosis who develop erythema nodosum or pneumonia should routinely be tested for coccidioidomycosis. Data from private health care organizations can augment surveillance of diseases important to public health.


Subject(s)
Coccidioidomycosis , Humans , Coccidioidomycosis/epidemiology , Coccidioidomycosis/diagnosis , Coccidioidomycosis/therapy , Coccidioidomycosis/drug therapy , Arizona/epidemiology , Ambulatory Care/statistics & numerical data , Endemic Diseases/statistics & numerical data , Male , Health Services Accessibility/statistics & numerical data , Female , Prevalence , Pneumonia/epidemiology , Pneumonia/diagnosis , Pneumonia/therapy
14.
J Wildl Dis ; 60(3): 634-646, 2024 07 01.
Article in English | MEDLINE | ID: mdl-38741368

ABSTRACT

Pathogens have traditionally been studied in isolation within host systems; yet in natural settings they frequently coexist. This raises questions about the dynamics of co-infections and how host life-history traits might predict co-infection versus single infection. To address these questions, we investigated the presence of two parasites, a gut parasite (Isospora coccidians) and a blood parasite (Plasmodium spp.), in House Finches (Haemorhous mexicanus), a common passerine bird in North America. We then correlated these parasitic infections with various health and condition metrics, including hematological parameters, plasma carotenoids, lipid-soluble vitamins, blood glucose concentration, body condition, and prior disease history. Our study, based on 48 birds captured in Tempe, Arizona, US, in October 2021, revealed that co-infected birds exhibited elevated circulating lutein levels and a higher heterophil:lymphocyte ratio (H/L ratio) compared to those solely infected with coccidia Isospora spp. This suggests that co-infected birds experience heightened stress and may use lutein to bolster immunity against both pathogens, and that there are potentially toxic effects of lutein in co-infected birds compared to those infected solely with coccidia Isospora sp. Our findings underscore the synergistic impact of coparasitism, emphasizing the need for more co-infection studies to enhance our understanding of disease dynamics in nature, as well as its implications for wildlife health and conservation efforts.


Subject(s)
Bird Diseases , Coccidiosis , Coinfection , Finches , Isospora , Malaria, Avian , Plasmodium , Animals , Finches/parasitology , Coinfection/veterinary , Coinfection/parasitology , Coinfection/epidemiology , Malaria, Avian/epidemiology , Malaria, Avian/parasitology , Malaria, Avian/blood , Bird Diseases/parasitology , Bird Diseases/epidemiology , Bird Diseases/blood , Isospora/isolation & purification , Coccidiosis/veterinary , Coccidiosis/epidemiology , Coccidiosis/parasitology , Plasmodium/isolation & purification , Isosporiasis/veterinary , Isosporiasis/epidemiology , Isosporiasis/parasitology , Arizona/epidemiology , Male , Female
15.
Vector Borne Zoonotic Dis ; 24(8): 552-562, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38775097

ABSTRACT

Background: Throughout the Americas, Lyssavirus rabies (RV) perpetuates as multiple variants among bat and mesocarnivore species. Interspecific RV spillover occurs on occasion, but clusters and viral host shifts are rare. The spillover and host shift of a big brown bat (Eptesicus fuscus) RV variant Ef-W1 into mesocarnivores was reported previously on several occasions during 2001-2009 in Flagstaff, Arizona, USA, and controlled through rabies vaccination of target wildlife. During autumn 2021, a new cluster of Ef-W1 RV cases infecting striped skunks (Mephitis mephitis) was detected from United States Department of Agriculture enhanced rabies surveillance in Flagstaff. The number of Ef-W1 RV spillover cases within a short timeframe suggested the potential for transmission between skunks and an emerging host shift. Materials and Methods: Whole and partial RV genomic sequencing was performed to evaluate the phylogenetic relationships of the 2021-2023 Ef-W1 cases infecting striped skunks with earlier outbreaks. Additionally, real-time reverse-transcriptase PCR (rtRT-PCR) was used to opportunistically compare viral RNA loads in brain and salivary gland tissues of naturally infected skunks. Results: Genomic RV sequencing revealed that the origin of the 2021-2023 epizootic of Ef-W1 RV was distinct from the multiple outbreaks detected from 2001-2009. Naturally infected skunks with the Ef-W1 RV showed greater viral RNA loads in the brain, but equivalent viral RNA loads in the mandibular salivary glands, compared to an opportunistic sample of skunks naturally infected with a South-Central skunk RV from northern Colorado, USA. Conclusion: Considering a high risk for onward transmission and spread of the Ef-W1 RV in Flagstaff, public outreach, enhanced rabies surveillance, and control efforts, focused on education, sample characterization, and vaccination, have been ongoing since 2021 to mitigate and prevent the spread and establishment of Ef-W1 RV in mesocarnivores.


Subject(s)
Chiroptera , Mephitidae , Phylogeny , Rabies , Animals , Arizona/epidemiology , Mephitidae/virology , Rabies/epidemiology , Rabies/veterinary , Rabies/virology , Chiroptera/virology , Rabies virus/genetics , Rabies virus/classification , Rabies virus/isolation & purification , Lyssavirus/genetics , Lyssavirus/classification , Lyssavirus/isolation & purification , Communicable Diseases, Emerging/virology , Communicable Diseases, Emerging/epidemiology , Communicable Diseases, Emerging/veterinary , Genome, Viral
16.
mSphere ; 9(5): e0010524, 2024 May 29.
Article in English | MEDLINE | ID: mdl-38712930

ABSTRACT

Wastewater surveillance can reveal population-level infectious disease burden and emergent public health threats can be reliably assessed through wastewater surveillance. While molecular methods for wastewater monitoring of microorganisms have traditionally relied on PCR-based approaches, next-generation sequencing (NGS) can provide deeper insights via genomic analyses of multiple diverse pathogens. We conducted a year-long sequencing surveillance of 1,408 composite wastewater samples collected from 12 neighborhood-level access points in the greater Tempe area, Arizona, USA, and show that variation in wastewater viruses is driven by seasonal time and location. The temporal dynamics of viruses in wastewater were influenced cyclically, with the most dissimilarity between samples 23 weeks apart (i.e., winter vs summer, spring vs fall). We identified diverse urinary and enteric viruses including polyomaviruses, astroviruses, and noroviruses, and showed that their genotypes/subtypes shifted across seasons. We show that while wastewater data of certain respiratory viruses like severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strongly correlate with clinical case rates, laboratory-reported case incidences were discordant with surges of high viral load in wastewater for other viruses like human coronavirus 229E. These results demonstrate the utility of wastewater sequencing for informing decision-making in public health.IMPORTANCEWastewater surveillance can provide insights into the spread of pathogens in communities. Advances in next-generation sequencing (NGS) methodologies allow for more precise detection of viruses in wastewater. Long-term wastewater surveillance of viruses is an important tool for public health preparedness. This system can act as a public health observatory that gives real-time early warning for infectious disease outbreaks and improved response times.


Subject(s)
High-Throughput Nucleotide Sequencing , Seasons , Wastewater , Wastewater/virology , Arizona/epidemiology , Humans , Viruses/genetics , Viruses/isolation & purification , Viruses/classification , SARS-CoV-2/genetics , SARS-CoV-2/isolation & purification , Wastewater-Based Epidemiological Monitoring , Genotype , Polyomavirus/genetics , Polyomavirus/isolation & purification , Polyomavirus/classification , Genomics/methods , Norovirus/genetics , Norovirus/isolation & purification , Norovirus/classification , Enterovirus/genetics , Enterovirus/isolation & purification , Enterovirus/classification , COVID-19/epidemiology , COVID-19/virology
17.
MMWR Morb Mortal Wkly Rep ; 73(20): 456-459, 2024 May 23.
Article in English | MEDLINE | ID: mdl-38781100

ABSTRACT

Trichinellosis is a parasitic zoonotic disease transmitted through the consumption of meat from animals infected with Trichinella spp. nematodes. In North America, human trichinellosis is rare and is most commonly acquired through consumption of wild game meat. In July 2022, a hospitalized patient with suspected trichinellosis was reported to the Minnesota Department of Health. One week before symptom onset, the patient and eight other persons shared a meal that included bear meat that had been frozen for 45 days before being grilled and served rare with vegetables that had been cooked with the meat. Investigation identified six trichinellosis cases, including two in persons who consumed only the vegetables. Motile Trichinella larvae were found in remaining bear meat that had been frozen for >15 weeks. Molecular testing identified larvae from the bear meat as Trichinella nativa, a freeze-resistant species. Persons who consume meat from wild game animals should be aware that that adequate cooking is the only reliable way to kill Trichinella parasites and that infected meat can cross-contaminate other foods.


Subject(s)
Disease Outbreaks , Meat , Trichinellosis , Trichinellosis/epidemiology , Trichinellosis/diagnosis , Humans , Animals , Male , Minnesota/epidemiology , Female , Adult , South Dakota/epidemiology , Arizona/epidemiology , Meat/parasitology , Middle Aged , Trichinella/isolation & purification , Ursidae/parasitology , Adolescent , Aged , Young Adult
18.
Viruses ; 16(5)2024 04 27.
Article in English | MEDLINE | ID: mdl-38793574

ABSTRACT

Influenza viruses are constantly evolving and are therefore monitored worldwide in the hope to reduce the burden of disease by annual updates to vaccine recommendations. We conducted genomic sequencing of 110 influenza A and 30 influenza B viruses from specimens collected between October 2023 and February 2024 in Arizona, USA. We identified mutations in the hemagglutinin (HA) antigenic sites as well as the neuraminidase (NA) gene in our samples. We also found no unique HA and NA mutations in vaccinated yet influenza-infected individuals. Real-time genomic sequencing surveillance is important to ensure influenza vaccine effectiveness.


Subject(s)
Genome, Viral , Influenza A virus , Influenza B virus , Influenza, Human , Mutation , Neuraminidase , Arizona/epidemiology , Humans , Influenza, Human/epidemiology , Influenza, Human/virology , Neuraminidase/genetics , Influenza B virus/genetics , Influenza A virus/genetics , Influenza A virus/classification , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Genomics/methods , Phylogeny , Adult , Epidemiological Monitoring , Child , Adolescent , Middle Aged , Male , Female , Child, Preschool , Aged , Influenza Vaccines/immunology , Influenza Vaccines/genetics , Young Adult , Whole Genome Sequencing
19.
MMWR Morb Mortal Wkly Rep ; 73(18): 420-422, 2024 May 09.
Article in English | MEDLINE | ID: mdl-38722805

ABSTRACT

Mycobacterium abscessus is an intrinsically drug-resistant, rapidly growing, nontuberculous mycobacterium; extrapulmonary infections have been reported in association with medical tourism (1). During November-December 2022, two Colorado hospitals (hospitals A and B) treated patient A, a Colorado woman aged 30-39 years, for M. abscessus meningitis. In October 2022, she had received intrathecal donor embryonic stem cell injections in Baja California, Mexico to treat multiple sclerosis and subsequently experienced headaches and fevers, consistent with meningitis. Her cerebrospinal fluid revealed neutrophilic pleocytosis and grew M. abscessus in culture at hospital A. Hospital A's physicians consulted hospital B's infectious diseases (ID) physicians to co-manage this patient (2).


Subject(s)
Disease Outbreaks , Mycobacterium Infections, Nontuberculous , Mycobacterium abscessus , Humans , Colorado/epidemiology , Adult , Female , Mexico/epidemiology , Mycobacterium abscessus/isolation & purification , Mycobacterium Infections, Nontuberculous/epidemiology , Arizona/epidemiology , Stem Cell Transplantation
20.
J Community Health ; 49(5): 935-941, 2024 Oct.
Article in English | MEDLINE | ID: mdl-38643428

ABSTRACT

AIMS: Evaluate the social determinants of health (SDOH) associated with suicidality among female Service Members and Veterans (SMV) in Arizona. METHODS: Used data from a statewide Arizona Veteran Survey (n = 1,134) to analyze SDOH associated with suicidality (any self-report of suicidal ideation, suicide attempt, or calling a crisis line). Response data were cross-tabulated and analyzed for statistical significance using a chi-square test with a p-value of p < 0.05. RESULTS: Depression, disability, barriers to treatment, housing instability, feelings of loneliness, and more were associated with increased suicidality among respondents. Substance use within the last 30 days, social support, and Veteran social support were not found to be significantly associated with suicidality. CONCLUSIONS: Female SMV populations experiencing social, economic, and health disparities appear to be at higher risk for suicide. These findings suggest that future suicide prevention efforts may be more effective if tailored towards populations in need of additional support and social services.


Subject(s)
Social Determinants of Health , Suicide , Veterans , Humans , Female , Middle Aged , Adult , Veterans/psychology , Veterans/statistics & numerical data , Arizona/epidemiology , Suicide/statistics & numerical data , Suicide/psychology , Aged , Suicidal Ideation , Young Adult , Social Support , Depression/epidemiology , Loneliness/psychology , Suicide, Attempted/statistics & numerical data , Risk Factors , Adolescent
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