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1.
Vet Res ; 55(1): 135, 2024 Oct 10.
Article in English | MEDLINE | ID: mdl-39390558

ABSTRACT

In this study, equine intestinal enteroids (EIEs) were generated from the duodenum, jejunum, and ileum and inoculated with equine coronavirus (ECoV) to investigate their suitability as in vitro models with which to study ECoV infection. Immunohistochemistry revealed that the EIEs were composed of various cell types expressed in vivo in the intestinal epithelium. Quantitative reverse-transcription PCR (qRT-PCR) and virus titration showed that ECoV had infected and replicated in the EIEs. These results were corroborated by electron microscopy. This study suggests that EIEs can be novel in vitro tools for studying the interaction between equine intestinal epithelium and ECoV.


Subject(s)
Horse Diseases , Animals , Horses , Horse Diseases/virology , Virus Replication , Coronavirus Infections/veterinary , Coronavirus Infections/virology , Intestinal Mucosa/virology , Betacoronavirus 1/physiology
2.
Front Immunol ; 15: 1451154, 2024.
Article in English | MEDLINE | ID: mdl-39355235

ABSTRACT

Introduction: The critical early stages of infection and innate immune responses to porcine epidemic diarrhea virus (PEDV) at the intestinal epithelium remain underexplored due to the limitations of traditional cell culture and animal models. This study aims to establish a porcine enteroid culture model to investigate potential differences in susceptibility to infection across segments of the porcine small intestine (duodenum, jejunum, and ileum). Methods: Intestinal crypt cells from nursery pigs were cultured in Matrigel to differentiate into porcine enteroid monolayer cultures (PEMCs). Following characterization, PEMCs were enzymatically dissociated and subcultured on transwell inserts (PETCs) for apical surface exposure and infection studies. Characterization of region-specific PEMCs and PETCs included assessment of morphology, proliferation, viability, and cellular phenotyping via immunohistochemistry/immunocytochemistry and gene expression analysis. Subsequently, PETCs were inoculated with 105 TCID50 (50% tissue culture infectious dose)/mL of a high pathogenic PEDV non-S INDEL strain and incubated for 24 h. Infection outcomes were assessed by cytopathic effect, PEDV N protein expression (immunofluorescence assay, IFA), and PEDV N-gene detection (quantitative reverse transcription polymerase chain reaction, RT-qPCR). Results: No significant morphological and phenotypical differences were observed among PEMCs and PETCs across intestinal regions, resembling the porcine intestinal epithelium. Although PETCs established from different segments of the small intestine were susceptible to PEDV infection, jejunum-derived PETCs exhibited higher PEDV replication, confirmed by IFA and RT-qPCR. Discussion: This segment-specific enteroid culture model provides a reliable platform for virological studies, offering a controlled environment that overcomes the limitations of in vivo and traditional cell culture methods. Standardizing culture conditions and characterizing the model are essential for advancing enteroid-based infection models.


Subject(s)
Coronavirus Infections , Intestine, Small , Porcine epidemic diarrhea virus , Animals , Porcine epidemic diarrhea virus/physiology , Swine , Intestine, Small/immunology , Intestine, Small/virology , Coronavirus Infections/virology , Coronavirus Infections/veterinary , Coronavirus Infections/immunology , Laminin , Drug Combinations , Swine Diseases/virology , Swine Diseases/immunology , Disease Susceptibility , Collagen/metabolism , Organoids/virology , Intestinal Mucosa/immunology , Intestinal Mucosa/virology , Proteoglycans , Cells, Cultured
3.
Vet Res ; 55(1): 113, 2024 Sep 20.
Article in English | MEDLINE | ID: mdl-39304917

ABSTRACT

Transmissible gastroenteritis virus (TGEV) causes high mortality in young piglets (< 3 days of age). With aging, the susceptibility/morbidity/mortality rates drop. We previously hypothesized that the age-related changes in the intestinal mucus could be responsible for this resistance. Hence, this study investigated the effect of porcine intestinal mucus from 3-day and 3-week-old pigs on the free mobility of the virulent TGEV Miller strain, and on the infection in swine testicle (ST) cells. Single particle tracking (SPT) revealed that TGEV had significantly higher diffusion coefficients in 3-day mucus compared to 3-week mucus. TGEV and charged and uncharged control nanoparticles diffused freely in 3-day mucus but were hindered by 3-week mucus in the diffusion model; TGEV mimicked the diffusion behavior of negatively charged carboxylated particles. Inoculation of ST cells with TGEV in the presence of 3-week mucus resulted in a significantly lower average number of infected cells (30.9 ± 11.9/5 fields) compared with 3-day mucus (84.6 ± 16.4/5 fields). These results show that 3-week mucus has a significant TGEV-blocking activity compared to 3-day mucus in free diffusion and infection of the underlying susceptible cells. Additionally, a label-free proteomics analysis revealed an increased expression of mucin 13, known for negatively regulating the tight junctions in intestinal epithelium, in 3-day-old pigs. In 3-week-old pigs, a higher expression of mucin 2, a type of secreted mucin which is known for inhibiting coronavirus infection, was observed. Concludingly, this study demonstrated a protective effect of 3-week mucus against viral infections.


Subject(s)
Gastroenteritis, Transmissible, of Swine , Mucus , Transmissible gastroenteritis virus , Animals , Transmissible gastroenteritis virus/physiology , Swine , Gastroenteritis, Transmissible, of Swine/virology , Mucus/virology , Intestinal Mucosa/virology , Age Factors
4.
Curr Microbiol ; 81(9): 296, 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-39105989

ABSTRACT

Duck enteritis virus (DEV) may lead to vascular injury, gastrointestinal mucosal erosion, lymphoid organ injury, and Polyinosinic-polycytidylic acid (Poly I:C) has an antiviral effect by inducing low levels of interferon. The purpose of this study was to explore the pathogenesis of DEV-induced intestinal injury in ducks and to verify the therapeutic effects of different concentrations of Poly I:C. In this study, duck enteritis model was established by infecting healthy Pekin ducks with DEV. Duck intestinal tissues were extracted from normal control group, model group, and treatment group with different doses of Poly I:C. In vivo, HE and TUNEL staining were used to observe the morphological changes and apoptosis. In vitro, the proliferation and apoptosis of duck intestinal epithelial cells were evaluated by MTT assay, TUNEL staining, and flow cytometry. The results showed that Poly I:C protected ducks from DEV toxicity by improving intestinal morphology and inhibiting apoptosis. In addition, the antiviral effect of Poly I:C on DEV was found in a dose-dependent manner, with a more relatively obvious effect at a high dose of Poly I:C. All in all, these results demonstrated that Poly I:C played a vital role in the apoptosis induced by DEV in ducks and modest dose of Poly I:C treatment worked well and may provide important reference for the development of new antiviral drugs in the future.


Subject(s)
Apoptosis , Ducks , Enteritis , Poly I-C , Animals , Ducks/virology , Poly I-C/pharmacology , Poly I-C/administration & dosage , Apoptosis/drug effects , Enteritis/virology , Enteritis/drug therapy , Enteritis/veterinary , Poultry Diseases/virology , Poultry Diseases/drug therapy , Intestines/virology , Intestines/pathology , Antiviral Agents/pharmacology , Mardivirus/drug effects , Intestinal Mucosa/virology , Intestinal Mucosa/drug effects , Intestinal Mucosa/pathology
5.
Virol J ; 21(1): 157, 2024 Jul 11.
Article in English | MEDLINE | ID: mdl-38992629

ABSTRACT

Newborn piglets' health is seriously threatened by the porcine epidemic diarrhea virus (PEDV), which also has a significant effect on the pig industry. The gut microbiota produces butyrate, an abundant metabolite that modulates intestinal function through many methods to improve immunological and intestinal barrier function. The objective of this investigation was to ascertain how elevated butyrate concentrations impacted the host transcriptional profile of PEDV CV777 strain infection. Our findings showed that higher concentrations of butyrate have a stronger inhibitory effect on PEDV CV777 strain infection. According to RNA-seq data, higher concentrations of butyrate induced more significant transcriptional changes in IPEC-J2 cells, and signaling pathways such as PI3K-AKT may play a role in the inhibition of PEDV CV777 strain by high concentrations of butyrate. Ultimately, we offer a theoretical and experimental framework for future research and development of novel approaches to harness butyrate's antiviral infection properties.


Subject(s)
Butyrates , Epithelial Cells , Porcine epidemic diarrhea virus , Animals , Porcine epidemic diarrhea virus/drug effects , Porcine epidemic diarrhea virus/physiology , Swine , Butyrates/pharmacology , Butyrates/metabolism , Epithelial Cells/virology , Epithelial Cells/drug effects , Cell Line , Swine Diseases/virology , Coronavirus Infections/virology , Coronavirus Infections/drug therapy , Coronavirus Infections/veterinary , Antiviral Agents/pharmacology , Signal Transduction/drug effects , Intestinal Mucosa/metabolism , Intestinal Mucosa/virology , Intestinal Mucosa/drug effects , Virus Replication/drug effects , Intestines/virology
6.
J Interferon Cytokine Res ; 44(10): 438-452, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39076109

ABSTRACT

Interferon lambdas (IFN-λs) are crucial to control virus infections at mucosal surfaces. Interleukin-22 (IL-22) was reported to help IFN-λ control rotavirus infection in the intestinal epithelium of mice either by aiding in the induction of interferon-stimulated genes (ISGs) or by increasing cell proliferation thereby clearing virally infected cells. We investigated whether IL-22 and IFN-λs exhibit similar synergistic effects in human intestinal epithelial cells (IECs) models. Our results showed that co-treatment of IL-22 and IFN-λ induced more phosphorylation of STAT1 than either cytokine used alone. However, this increased STAT1 activation did not translate to increased ISGs production or antiviral protection. Transcriptomics analysis revealed that despite sharing a common subunit (IL-10Rb) within their heterodimeric receptors and activating similar STATs, the signaling generated by IL-22 and IFN-λs is independent, with IFN-λ signaling inducing ISGs and IL-22 signaling inducing cell proliferation genes. Using human intestinal organoids, we confirmed that IL-22 increased the size of the organoids through increased cell proliferation and expression of the stem cell marker (OLFM4). These findings suggest that in human intestinal cells, IFN-λs and IL-22 act independently to clear virus infections. IFN-λs induce ISGs to control virus replication and spread, whereas IL-22 increases cell proliferation to eliminate infected cells and repair the damage epithelium. Although these two cytokines do not act synergistically, each plays a key function in the protection of human IECs.


Subject(s)
Cell Proliferation , Epithelial Cells , Interleukin-22 , Interleukins , Intestinal Mucosa , Humans , Interleukins/metabolism , Interleukins/pharmacology , Cell Proliferation/drug effects , Intestinal Mucosa/virology , Intestinal Mucosa/metabolism , Epithelial Cells/virology , Epithelial Cells/metabolism , STAT1 Transcription Factor/metabolism , Signal Transduction , Organoids/virology , Organoids/metabolism , Interferons/metabolism , Rotavirus , Animals
7.
J Med Virol ; 96(7): e29783, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38965890

ABSTRACT

Many COVID-19 patients suffer from gastrointestinal symptoms and impaired intestinal barrier function is thought to play a key role in Long COVID. Despite its importance, the impact of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) on intestinal epithelia is poorly understood. To address this, we established an intestinal barrier model integrating epithelial Caco-2 cells, mucus-secreting HT29 cells and Raji cells. This gut epithelial model allows efficient differentiation of Caco-2 cells into microfold-like cells, faithfully mimics intestinal barrier function, and is highly permissive to SARS-CoV-2 infection. Early strains of SARS-CoV-2 and the Delta variant replicated with high efficiency, severely disrupted barrier function, and depleted tight junction proteins, such as claudin-1, occludin, and ZO-1. In comparison, Omicron subvariants also depleted ZO-1 from tight junctions but had fewer damaging effects on mucosal integrity and barrier function. Remdesivir, the fusion inhibitor EK1 and the transmembrane serine protease 2 inhibitor Camostat inhibited SARS-CoV-2 replication and thus epithelial barrier damage, while the Cathepsin inhibitor E64d was ineffective. Our results support that SARS-CoV-2 disrupts intestinal barrier function but further suggest that circulating Omicron variants are less damaging than earlier viral strains.


Subject(s)
COVID-19 , Intestinal Mucosa , SARS-CoV-2 , Tight Junctions , Virus Replication , Humans , SARS-CoV-2/pathogenicity , Caco-2 Cells , COVID-19/virology , COVID-19/pathology , Intestinal Mucosa/virology , Intestinal Mucosa/pathology , Tight Junctions/virology , Alanine/analogs & derivatives , Zonula Occludens-1 Protein/metabolism , Zonula Occludens-1 Protein/genetics , Antiviral Agents/pharmacology , HT29 Cells , Occludin/metabolism , Occludin/genetics , Adenosine Monophosphate/analogs & derivatives
8.
Methods Mol Biol ; 2813: 295-308, 2024.
Article in English | MEDLINE | ID: mdl-38888785

ABSTRACT

Identification and characterization of CD8+ T-cells is important to determine their role in protecting and clearing viral infections. Here we provide details of the peptide-MHC (pMHC) tetramers-based approach to identify antigen-specific T-cells in human and murine samples. This method provides ex vivo quantification and functional characterization of T-cells reactive to specific viral antigens derived from CMV and rotavirus in human blood and in murine intestinal lamina propria samples, respectively.


Subject(s)
Antigens, Viral , CD8-Positive T-Lymphocytes , Rotavirus , Animals , Humans , Mice , CD8-Positive T-Lymphocytes/immunology , Antigens, Viral/immunology , Rotavirus/immunology , Cytomegalovirus/immunology , Virus Diseases/immunology , Virus Diseases/virology , Epitopes, T-Lymphocyte/immunology , Intestinal Mucosa/immunology , Intestinal Mucosa/virology
9.
Viruses ; 16(6)2024 May 24.
Article in English | MEDLINE | ID: mdl-38932125

ABSTRACT

The COVID-19 pandemic, which emerged in early 2020, has had a profound and lasting impact on global health, resulting in over 7.0 million deaths and persistent challenges. In addition to acute concerns, there is growing attention being given to the long COVID health consequences for survivors of COVID-19 with documented cases of cardiovascular abnormalities, liver disturbances, lung complications, kidney issues, and noticeable cognitive deficits. Recent studies have investigated the physiological changes in various organs following prolonged exposure to murine hepatitis virus-1 (MHV-1), a coronavirus, in mouse models. One significant finding relates to the effects on the gastrointestinal tract, an area previously understudied regarding the long-lasting effects of COVID-19. This research sheds light on important observations in the intestines during both the acute and the prolonged phases following MHV-1 infection, which parallel specific changes seen in humans after exposure to SARS-CoV-2. Our study investigates the histopathological alterations in the small intestine following MHV-1 infection in murine models, revealing significant changes reminiscent of inflammatory bowel disease (IBD), celiac disease. Notable findings include mucosal inflammation, lymphoid hyperplasia, goblet cell hyperplasia, and immune cell infiltration, mirroring pathological features observed in IBD. Additionally, MHV-1 infection induces villous atrophy, altered epithelial integrity, and inflammatory responses akin to celiac disease and IBD. SPIKENET (SPK) treatment effectively mitigates intestinal damage caused by MHV-1 infection, restoring tissue architecture and ameliorating inflammatory responses. Furthermore, investigation into long COVID reveals intricate inflammatory profiles, highlighting the potential of SPK to modulate intestinal responses and restore tissue homeostasis. Understanding these histopathological alterations provides valuable insights into the pathogenesis of COVID-induced gastrointestinal complications and informs the development of targeted therapeutic strategies.


Subject(s)
COVID-19 , Disease Models, Animal , Murine hepatitis virus , SARS-CoV-2 , Animals , Mice , COVID-19/pathology , COVID-19/virology , COVID-19/immunology , Murine hepatitis virus/pathogenicity , SARS-CoV-2/pathogenicity , Intestinal Mucosa/pathology , Intestinal Mucosa/virology , Intestines/pathology , Intestines/virology , Intestine, Small/virology , Intestine, Small/pathology , Female
10.
Nat Commun ; 15(1): 4764, 2024 Jun 04.
Article in English | MEDLINE | ID: mdl-38834561

ABSTRACT

Bacteriophage are sophisticated cellular parasites that can not only parasitize bacteria but are increasingly recognized for their direct interactions with mammalian hosts. Phage adherence to mucus is known to mediate enhanced antimicrobial effects in vitro. However, little is known about the therapeutic efficacy of mucus-adherent phages in vivo. Here, using a combination of in vitro gastrointestinal cell lines, a gut-on-a-chip microfluidic model, and an in vivo murine gut model, we demonstrated that a E. coli phage, øPNJ-6, provided enhanced gastrointestinal persistence and antimicrobial effects. øPNJ-6 bound fucose residues, of the gut secreted glycoprotein MUC2, through domain 1 of its Hoc protein, which led to increased intestinal mucus production that was suggestive of a positive feedback loop mediated by the mucus-adherent phage. These findings extend the Bacteriophage Adherence to Mucus model into phage therapy, demonstrating that øPNJ-6 displays enhanced persistence within the murine gut, leading to targeted depletion of intestinal pathogenic bacteria.


Subject(s)
Escherichia coli Infections , Escherichia coli , Intestinal Mucosa , Mucin-2 , Animals , Escherichia coli/virology , Mice , Intestinal Mucosa/microbiology , Intestinal Mucosa/virology , Mucin-2/metabolism , Humans , Escherichia coli Infections/microbiology , Escherichia coli Infections/therapy , Phage Therapy/methods , Bacterial Adhesion , Female , Mucus/metabolism , Mucus/virology , Coliphages/physiology , Fucose/metabolism , Mice, Inbred C57BL
11.
Clin Transl Gastroenterol ; 15(8): e00731, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-38934504

ABSTRACT

INTRODUCTION: Patients with inflammatory bowel disease (IBD) are predisposed to the reactivation of viral infections such as cytomegalovirus (CMV). Clinical discrimination of disease flares and colonic CMV reactivation is difficult in patients with established diagnosis of IBD, and there are no reliable noninvasive diagnostic tools yet. Furthermore, the influence of novel therapeutics including biologicals and Janus kinase inhibitors on the risk of CMV colitis is unclear. The goal of this study was to identify risk factors and clinical determinants of CMV colitis that could serve as minimally invasive markers both for active CMV colitis and relapse. METHODS: To this end, a retrospective analysis of 376 patients with suspected or confirmed CMV colitis 2016-2023 was performed. RESULTS: Previous administration of systemic steroids increased the odds of CMV colitis to OR 4.6. Biologicals did not change the incidence of CMV colitis but decreased the OR of a relapse to 0.13. Clinical parameters such as severely bloody diarrhea, intense microscopic ulcerative damage, and decreased serum tryptophan correlated with detection of CMV. Importantly, persistent decrease of tryptophan was observed in patients with CMV relapse. Furthermore, tryptophan degradation through the kynurenine pathway was increased in CMV-positive patients. DISCUSSION: Taken together, we identify decreased serum tryptophan as a novel potential minimally invasive marker to aid identification of IBD patients with active CMV colitis and at high risk for relapse.


Subject(s)
Cytomegalovirus Infections , Cytomegalovirus , Intestinal Mucosa , Tryptophan , Humans , Cytomegalovirus Infections/diagnosis , Cytomegalovirus Infections/blood , Cytomegalovirus Infections/virology , Cytomegalovirus Infections/complications , Male , Female , Retrospective Studies , Middle Aged , Adult , Intestinal Mucosa/pathology , Intestinal Mucosa/virology , Tryptophan/blood , Tryptophan/metabolism , Cytomegalovirus/isolation & purification , Cytomegalovirus/immunology , Risk Factors , Colon/pathology , Colon/virology , Colitis, Ulcerative/complications , Colitis, Ulcerative/blood , Colitis, Ulcerative/diagnosis , Colitis, Ulcerative/virology , Colitis, Ulcerative/drug therapy , Colitis/virology , Colitis/blood , Colitis/diagnosis , Colitis/complications , Biomarkers/blood , Recurrence , Inflammatory Bowel Diseases/complications , Inflammatory Bowel Diseases/blood , Inflammatory Bowel Diseases/drug therapy , Aged , Colonoscopy , Virus Activation
12.
Infect Dis (Lond) ; 56(8): 669-677, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38889538

ABSTRACT

AIMS: To explore if intestinal immunity induced by infection with live viruses in the oral poliovirus vaccine (OPV) is essential, necessary or even helpful in interrupting transmission of wild poliovirus (WPV) for global polio eradication. METHODS: We reviewed the biology of virus-host interactions in WPV infection and its alterations by OPV-induced immunity for direct evidence of the usefulness of intestinal immunity. We also explored indirect evidence by way of the effect of the inactivated poliovirus vaccine (IPV) on the biology and on transmission dynamics of WPV. RESULTS: Immunity, systemic and intestinal, induced by infection with WPV or vaccine viruses, does not prevent re-infection with WPV or vaccine viruses respectively, when exposed. Such re-infected hosts shed virus in the throat and in faeces and are sources of further transmission. Immunity protects against polio paralysis-hence reinfection always remain asymptommatic and silent. CONCLUSION: Vaccine virus-induced intestinal immunity is not necessary for polio eradication. The continued and intensive vaccination efforts using OPV under the assumption of its superiority over IPV have resulted in the well-known undesirable effects, namely vaccine associated paralytic polio and the emergence of de-attenuated circulating vaccine-derived polioviruses, in addition to the delay in completing global WPV eradication.


Subject(s)
Disease Eradication , Immunity, Mucosal , Poliomyelitis , Poliovirus Vaccine, Oral , Poliovirus , Poliomyelitis/prevention & control , Poliomyelitis/immunology , Poliomyelitis/transmission , Humans , Poliovirus Vaccine, Oral/immunology , Poliovirus Vaccine, Oral/administration & dosage , Poliovirus/immunology , Intestinal Mucosa/immunology , Intestinal Mucosa/virology , Poliovirus Vaccine, Inactivated/immunology , Poliovirus Vaccine, Inactivated/administration & dosage , Vaccination
13.
Cells ; 13(11)2024 May 25.
Article in English | MEDLINE | ID: mdl-38891045

ABSTRACT

Porcine astrovirus (PAstV) has a potential zoonotic risk, with a high proportion of co-infection occurring with porcine epidemic diarrhea virus (PEDV) and other diarrheal pathogens. Despite its high prevalence, the cellular mechanism of PAstV pathogenesis is ill-defined. Previous proteomics analyses have revealed that the differentially expressed protein NOD-like receptor X1 (NLRX1) located in the mitochondria participates in several important antiviral signaling pathways in PAstV-4 infection, which are closely related to mitophagy. In this study, we confirmed that PAstV-4 infection significantly up-regulated NLRX1 and mitophagy in Caco-2 cells, while the silencing of NLRX1 or the treatment of mitophagy inhibitor 3-MA inhibited PAstV-4 replication. Additionally, PAstV-4 infection triggered the activation of the extracellular regulated protein kinases/ myosin light-chain kinase (ERK/MLCK) pathway, followed by the down-regulation of tight-junction proteins (occludin and ZO-1) as well as MUC-2 expression. The silencing of NLRX1 or the treatment of 3-MA inhibited myosin light-chain (MLC) phosphorylation and up-regulated occludin and ZO-1 proteins. Treatment of the ERK inhibitor PD98059 also inhibited MLC phosphorylation, while MLCK inhibitor ML-7 mitigated the down-regulation of mucosa-related protein expression induced by PAstV-4 infection. Yet, adding PD98059 or ML-7 did not affect NLRX1 expression. In summary, this study preliminarily explains that NLRX1 plays an important role in the disruption of intestinal mucosal function triggered by PAstV-4 infection via the ERK/MLC pathway. It will be helpful for further antiviral drug target screening and disease therapy.


Subject(s)
Intestinal Mucosa , Myosin-Light-Chain Kinase , Animals , Intestinal Mucosa/metabolism , Intestinal Mucosa/virology , Intestinal Mucosa/pathology , Caco-2 Cells , Humans , Swine , Myosin-Light-Chain Kinase/metabolism , Extracellular Signal-Regulated MAP Kinases/metabolism , Astroviridae Infections/virology , Mamastrovirus/physiology , Mitochondrial Proteins/metabolism , Mitochondrial Proteins/genetics , MAP Kinase Signaling System/drug effects , Swine Diseases/virology , Swine Diseases/metabolism , Signal Transduction/drug effects
14.
Viruses ; 16(5)2024 04 26.
Article in English | MEDLINE | ID: mdl-38793573

ABSTRACT

Cytomegalovirus (CMV) colitis is a critical condition associated with severe complications in ulcerative colitis (UC). This study aimed to investigate the diagnostic value of the presence of CMV DNA in intestinal mucosa tissue and blood samples in patients with active UC. This study included 81 patients with exacerbated symptoms of UC. Patient data were obtained from the Hospital Information Management System. CMV DNA in colorectal tissue and plasma samples were analyzed using a real-time quantitative PCR assay. CMV markers were detected using immunohistochemistry and hematoxylin-eosin staining. Immunohistochemistry positivity was observed in tissue samples from eight (9.9%) patients. Only one (1.2%) patient showed CMV-specific intranuclear inclusion bodies. CMV DNA was detected in 63.0% of the tissues (median: 113 copies/mg) and in 58.5% of the plasma samples (median: 102 copies/mL). For tissues, sensitivity and the negative predictive value (NPV) for qPCR were excellent (100.0%), whereas specificity and the positive predictive value (PPV) were low (41.9% and 15.7%, respectively). For plasma, sensitivity and NPV were high (100.0%) for qPCR, whereas specificity and PPV were low (48.6% and 24.0%, respectively). CMV DNA ≥392 copies/mg in tissue samples (sensitivity 100.0% and specificity 83.6%) and ≥578 copies/mL (895 IU/mL) in plasma samples (sensitivity 66.7% and specificity 100.0%) provided an optimal diagnosis for this test. The qPCR method improved patient management through the early detection of CMV colitis in patients with UC. However, reliance on qPCR positivity alone can lead to overdiagnosis. Quantification of CMV DNA can improve diagnostic specificity, although standardization is warranted.


Subject(s)
Colitis, Ulcerative , Cytomegalovirus Infections , Cytomegalovirus , DNA, Viral , Real-Time Polymerase Chain Reaction , Sensitivity and Specificity , Humans , Colitis, Ulcerative/diagnosis , Colitis, Ulcerative/virology , Cytomegalovirus/genetics , Cytomegalovirus/isolation & purification , Cytomegalovirus Infections/diagnosis , Cytomegalovirus Infections/virology , DNA, Viral/blood , DNA, Viral/genetics , Female , Male , Middle Aged , Adult , Real-Time Polymerase Chain Reaction/methods , Aged , Intestinal Mucosa/virology , Young Adult , Immunohistochemistry , Viral Load
15.
Biomolecules ; 14(5)2024 Apr 30.
Article in English | MEDLINE | ID: mdl-38785944

ABSTRACT

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) mainly targets the upper respiratory tract. It gains entry by interacting with the host cell receptor angiotensin-converting enzyme 2 (ACE2) via its heavily glycosylated spike glycoprotein. SARS-CoV-2 can also affect the gastrointestinal tract. Given the significant role of glycosylation in the life cycle of proteins and the multisystem target of SARS-CoV-2, the role of glycosylation in the interaction of S1 with ACE2 in Caco-2 cells was investigated after modulation of their glycosylation patterns using N-butyldeoxynojirimycin (NB-DNJ) and 1-deoxymannojirimycin (dMM), in addition to mutant CHO cells harboring mutations at different stages of glycosylation. The data show a substantial reduction in the interactions between the altered glycosylation forms of S1 and ACE2 in the presence of NB-DNJ, while varied outcomes resulted from dMM treatment. These results highlight the promising effects of NB-DNJ and its potential use as an off-label drug to treat SARS-CoV-2 infections.


Subject(s)
Angiotensin-Converting Enzyme 2 , SARS-CoV-2 , Spike Glycoprotein, Coronavirus , Humans , Caco-2 Cells , Angiotensin-Converting Enzyme 2/metabolism , Glycosylation , Spike Glycoprotein, Coronavirus/metabolism , SARS-CoV-2/metabolism , SARS-CoV-2/drug effects , Animals , CHO Cells , Cricetulus , Protein Transport , COVID-19/metabolism , COVID-19/virology , 1-Deoxynojirimycin/pharmacology , 1-Deoxynojirimycin/analogs & derivatives , Protein Binding , Intestinal Mucosa/metabolism , Intestinal Mucosa/virology
16.
PLoS Pathog ; 20(5): e1011961, 2024 May.
Article in English | MEDLINE | ID: mdl-38701091

ABSTRACT

Noroviruses (NoVs) are a leading cause of viral gastroenteritis. Despite global clinical relevance, our understanding of how host factors, such as antiviral cytokines interferons (IFNs), modulate NoV population dynamics is limited. Murine NoV (MNoV) is a tractable in vivo model for the study of host regulation of NoV. A persistent strain of MNoV, CR6, establishes a reservoir in intestinal tuft cells for chronic viral shedding in stool. However, the influence of host innate immunity and permissive cell numbers on viral population dynamics is an open question. We generated a pool of 20 different barcoded viruses (CR6BC) by inserting 6-nucleotide barcodes at the 3' position of the NS4 gene and used this pool as our viral inoculum for in vivo infections of different mouse lines. We found that over the course of persistent CR6 infection, shed virus was predominantly colon-derived, and viral barcode richness decreased over time irrespective of host immune status, suggesting that persistent infection involves a series of reinfection events. In mice lacking the IFN-λ receptor, intestinal barcode richness was enhanced, correlating with increased viral intestinal replication. IL-4 treatment, which increases tuft cell numbers, also increased barcode richness, indicating the abundance of permissive tuft cells to be a bottleneck during CR6 infection. In mice lacking type I IFN signaling (Ifnar1-/-) or all IFN signaling (Stat1-/-), barcode diversity at extraintestinal sites was dramatically increased, implicating different IFNs as critical bottlenecks at specific tissue sites. Of interest, extraintestinal barcodes were overlapping but distinct from intestinal barcodes, indicating that disseminated virus represents a distinct viral population than that replicating in the intestine. Barcoded viruses are a valuable tool to explore the influence of host factors on viral diversity in the context of establishment and maintenance of infection as well as dissemination and have provided important insights into how NoV infection proceeds in immunocompetent and immunocompromised hosts.


Subject(s)
Caliciviridae Infections , Interferons , Norovirus , Animals , Norovirus/physiology , Caliciviridae Infections/virology , Caliciviridae Infections/immunology , Mice , Interferons/metabolism , Persistent Infection/virology , Persistent Infection/immunology , Mice, Inbred C57BL , Intestinal Mucosa/virology , Intestinal Mucosa/immunology , Gastroenteritis/virology , Virus Replication , Mice, Knockout , Immunity, Innate , Virus Shedding
17.
Front Cell Infect Microbiol ; 14: 1371429, 2024.
Article in English | MEDLINE | ID: mdl-38650735

ABSTRACT

Background: Achieving sustained virologic response (SVR) in patients infected with hepatitis C virus (HCV) reduces all-cause mortality. However, the mechanisms and risk factors for liver fibrosis and portal hypertension post-SVR remain incompletely understood. In the gut-liver axis, mucosa-associated microbiota (MAM) substantially influence immune and metabolic functions, displaying spatial heterogeneity at the anatomical intestinal site. We analyzed MAM composition and function to isolate the locoregional MAM involved in chronic liver disease progression in HCV post-SVR patients. Methods: We collected MAM samples from three intestinal sites (terminal ileum, ascending colon, and sigmoid colon) via brushing during colonoscopy in 23 HCV post-SVR patients and 25 individuals without liver disease (controls). The 16S rRNA of bacterial DNA in specimens collected with a brush and in feces was sequenced. The molecular expression of intestinal tissues and hepatic tissues were evaluated by quantitative real-time PCR. Results: In the post-SVR group, the microbial ß-diversity of MAM, especially in the ascending colon, differed from the control group and was associated with liver fibrosis progression. In PICRUSt analysis, MAM in the ascending colon in the liver cirrhosis (LC) group showed compromised functions associated with the intestinal barrier and bile acid production, and FGF19 expression was markedly decreased in the terminal ileum biopsy tissue in the LC group. At the genus level, six short-chain fatty acid (SCFA)-producing bacterial genera, Blautia, Alistipes, Roseburia, Agathobaculum, Dorea, and Pseudoflavonifractor were reduced in the ascending colon of post-SVR LC patients. Conclusion: In patients of HCV post-SVR, we identified the association between the degree of liver fibrosis and dysbiosis of mucosa-associated SCFA-producing bacterial genera that may be related to intestinal barrier and bile acid production in the ascending colon.


Subject(s)
Colon, Ascending , Dysbiosis , Gastrointestinal Microbiome , Intestinal Mucosa , Liver Cirrhosis , RNA, Ribosomal, 16S , Sustained Virologic Response , Humans , Liver Cirrhosis/virology , Liver Cirrhosis/microbiology , Male , Middle Aged , Female , RNA, Ribosomal, 16S/genetics , Colon, Ascending/microbiology , Colon, Ascending/pathology , Intestinal Mucosa/microbiology , Intestinal Mucosa/virology , Hepacivirus/genetics , Feces/microbiology , Feces/virology , Aged , Hepatitis C, Chronic/complications , Hepatitis C, Chronic/microbiology , Hepatitis C, Chronic/virology , Bacteria/classification , Bacteria/isolation & purification , Bacteria/genetics , Adult , DNA, Bacterial/genetics , Bile Acids and Salts/metabolism
19.
Stem Cell Reports ; 19(5): 629-638, 2024 May 14.
Article in English | MEDLINE | ID: mdl-38670110

ABSTRACT

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection primarily affects the lung but can also cause gastrointestinal (GI) symptoms. In vitro experiments confirmed that SARS-CoV-2 robustly infects intestinal epithelium. However, data on infection of adult gastric epithelium are sparse and a side-by-side comparison of the infection in the major segments of the GI tract is lacking. We provide this direct comparison in organoid-derived monolayers and demonstrate that SARS-CoV-2 robustly infects intestinal epithelium, while gastric epithelium is resistant to infection. RNA sequencing and proteome analysis pointed to angiotensin-converting enzyme 2 (ACE2) as a critical factor, and, indeed, ectopic expression of ACE2 increased susceptibility of gastric organoid-derived monolayers to SARS-CoV-2. ACE2 expression pattern in GI biopsies of patients mirrors SARS-CoV-2 infection levels in monolayers. Thus, local ACE2 expression limits SARS-CoV-2 expression in the GI tract to the intestine, suggesting that the intestine, but not the stomach, is likely to be important in viral replication and possibly transmission.


Subject(s)
Angiotensin-Converting Enzyme 2 , COVID-19 , Gastric Mucosa , Intestinal Mucosa , SARS-CoV-2 , Angiotensin-Converting Enzyme 2/metabolism , Angiotensin-Converting Enzyme 2/genetics , SARS-CoV-2/physiology , Humans , COVID-19/virology , COVID-19/metabolism , Intestinal Mucosa/metabolism , Intestinal Mucosa/virology , Gastric Mucosa/metabolism , Gastric Mucosa/virology , Viral Tropism , Organoids/virology , Organoids/metabolism , Epithelial Cells/metabolism , Epithelial Cells/virology , Virus Replication , Animals
20.
Front Immunol ; 14: 1133886, 2023.
Article in English | MEDLINE | ID: mdl-37033941

ABSTRACT

Introduction: Human immunodeficiency virus type 1 (HIV) transmission mostly occurs through the genital and intestinal mucosae. Although HIV-1 transmission has been extensively investigated, gaps remain in understanding the initial steps of HIV entry through the colonic mucosa. We previously showed that HIV can selectively trigger mononuclear phagocytes (MNP) to migrate within colonic epithelial cells to sample virions. Mucosal exposure to human seminal plasma (HSP), rich in pro- and anti-inflammatory cytokines, chemokines and growth factors, may as well induce alterations of the colonic mucosa and recruit immune cells, hence, affecting pathogen sampling and transmission. Methods: Here, we studied the role of HSP on the paracellular intestinal permeability by analyzing the distribution of two proteins known to play a key role in controlling the intestinal barrier integrity, namely the tight junctions-associated junctional adhesion molecule (JAM-A) and the adherents junction associated protein E-cadherin (E-CAD), by immunofluorescence and confocal microscopy. Also, we evaluated if HSP promotes the recruitment of MNP cells, specifically, the CD11c and CD64 positive MNPs, to the apical side of the human colonic mucosa. At this scope, HSP of HIV-infected and uninfected individuals with known fertility status was tested for cytokines, chemokines and growth factors concentration and used in an ex vivo polarized colonic tissue culture system to mimic as closely as possible the physiological process. Results: HSP showed statistically significant differences in cytokines and chemokines concentrations between the three groups of donors, i.e. HIV infected, or uninfected fertile or randomly identified. Nevertheless, we showed that in the ex vivo tissue culture HSP in general, neither affected the morphological structure of the colonic mucosa nor modulated the paracellular intestinal permeability. Interestingly, CD11c+ MNP cells migrated to the apical surface of the colonic epithelium regardless, if incubated with HIV-infected or -uninfected HSPs, while CD64+ MNP cells, did not change their distribution within the colonic mucosa. Discussion: In conclusion, even if HSP did not perturb the integrity of the human colonic mucosa, it affected the migration of a specific subset of MNPs that express CD11c towards the apical side of the colonic mucosa, which in turn may be involved in pathogen sampling.


Subject(s)
Cell Movement , Colon , HIV Infections , Intestinal Mucosa , Monocytes , Semen , Humans , Cadherins/immunology , Cytokines/immunology , Epithelium/immunology , HIV Infections/immunology , HIV Infections/transmission , HIV Infections/virology , Junctional Adhesion Molecules , Phagocytes/immunology , Semen/immunology , Monocytes/immunology , CD11c Antigen/immunology , Intestinal Mucosa/immunology , Intestinal Mucosa/virology , Colon/immunology , Colon/virology , HIV-1/immunology , Cell Movement/immunology , Virus Internalization , Host-Pathogen Interactions/immunology
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