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1.
Plant Cell Rep ; 39(5): 577-587, 2020 May.
Article in English | MEDLINE | ID: mdl-32052127

ABSTRACT

KEY MESSAGE: The early flowering system HSP::AtFT allowed a fast evaluation of a gene containment system based on the construct PsEND1::barnase-barstar for poplar. Transgenic lines showed disturbed pollen development and sterility. Vertical gene transfer through pollen flow from transgenic or non-native plant species into their crossable natural relatives is a major concern. Gene containment approaches have been proposed to reduce or even avoid gene flow among tree species. However, evaluation of genetic containment strategies for trees is very difficult due to the long-generation times. Early flowering induction would allow faster evaluation of genetic containment in this case. Although no reliable methods were available for the induction of fertile flowers in poplar, recently, a new early flowering approach was developed. In this study, early flowering poplar lines containing the gene construct PsEND1::barnase-barstar were obtained. The PsEND1 promoter was chosen due to its early expression pattern, its versality and efficiency for generation of male-sterile plants fused to the barnase gene. RT-PCRs confirmed barnase gene activity in flowers, and pollen development was disturbed, leading to sterile flowers. The system developed in this study represents a valuable tool for gene containment studies in forest tree species.


Subject(s)
Bacterial Proteins/genetics , Flowers/growth & development , Gene Editing/methods , Plant Infertility/genetics , Plants, Genetically Modified/growth & development , Pollen/growth & development , Populus/growth & development , Ribonucleases/genetics , Arabidopsis Proteins/genetics , Bacterial Proteins/metabolism , Flowers/genetics , Flowers/metabolism , Flowers/radiation effects , Gene Expression Regulation, Plant , Gene Flow , Genetic Vectors , Heat-Shock Response , Plants, Genetically Modified/metabolism , Plants, Genetically Modified/radiation effects , Pollen/genetics , Populus/genetics , Populus/metabolism , Populus/radiation effects , Promoter Regions, Genetic , Ribonucleases/metabolism , Temperature , Transformation, Genetic
2.
Biol Res ; 52(1): 6, 2019 Feb 06.
Article in English | MEDLINE | ID: mdl-30728078

ABSTRACT

BACKGROUND: Pollen development is an energy-consuming process that particularly occurs during meiosis. Low levels of adenosine triphosphate (ATP) may cause cell death, resulting in CMS (cytoplasmic male sterility). DNA sequence differences in ATP synthase genes have been revealed between the N- and S-cytoplasms in the cotton CMS system. However, very few data are available at the RNA level. In this study, we compared five ATP synthase genes in the H276A, H276B and fertile F1 (H276A/H268) lines using RNA editing, RNA blotting and quantitative real time-PCR (qRT-PCR) to explore their contribution to CMS. A molecular marker for identifying male sterile cytoplasm (MSC) was also developed. RESULTS: RNA blotting revealed the absence of any novel orf for the ATP synthase gene sequence in the three lines. Forty-one RNA editing sites were identified in the coding sequences. RNA editing showed that proteins had 32.43% higher hydrophobicity and that 39.02% of RNA editing sites had proline converted to leucine. Two new stop codons were detected in atp6 and atp9 by RNA editing. Real-time qRT-PCR data showed that the atp1, atp6, atp8, and atp9 genes had substantially lower expression levels in H276A compared with those in H276B. By contrast, the expression levels of all five genes were increased in F1 (H276A/H268). Moreover, a molecular marker based on a 6-bp deletion upstream of atp8 in H276A was developed to identify male sterile cytoplasm (MSC) in cotton. CONCLUSIONS: Our data substantially contributes to the understanding of the function of ATP synthase genes in cotton CMS. Therefore, we suggest that ATP synthase genes might be an indirect cause of cotton CMS. Further research is needed to investigate the relationship among ATP synthase genes in cotton CMS.


Subject(s)
Adenosine Triphosphatases/genetics , Cytoplasm/genetics , Gossypium/enzymology , Plant Infertility/genetics , RNA Editing , Cytoplasm/metabolism , DNA, Mitochondrial/genetics , Gene Expression Regulation, Plant/genetics , Gossypium/genetics , Polymerase Chain Reaction , RNA, Mitochondrial/genetics
3.
Biol. Res ; 52: 6, 2019. tab, graf
Article in English | LILACS | ID: biblio-1011409

ABSTRACT

BACKGROUND: Pollen development is an energy-consuming process that particularly occurs during meiosis. Low levels of adenosine triphosphate (ATP) may cause cell death, resulting in CMS (cytoplasmic male sterility). DNA sequence differences in ATP synthase genes have been revealed between the N- and S-cytoplasms in the cotton CMS system. However, very few data are available at the RNA level. In this study, we compared five ATP synthase genes in the H276A, H276B and fertile F1 (H276A/H268) lines using RNA editing, RNA blotting and quantitative real time-PCR (qRT-PCR) to explore their contribution to CMS. A molecular marker for identifying male sterile cytoplasm (MSC) was also developed. RESULTS: RNA blotting revealed the absence of any novel orf for the ATP synthase gene sequence in the three lines. Forty-one RNA editing sites were identified in the coding sequences. RNA editing showed that proteins had 32.43% higher hydrophobicity and that 39.02% of RNA editing sites had proline converted to leucine. Two new stop codons were detected in atp6 and atp9 by RNA editing. Real-time qRT-PCR data showed that the atp1, atp6, atp8, and atp9 genes had substantially lower expression levels in H276A compared with those in H276B. By contrast, the expression levels of all five genes were increased in F1 (H276A/H268). Moreover, a molecular marker based on a 6-bp deletion upstream of atp8 in H276A was developed to identify male sterile cytoplasm (MSC) in cotton. CONCLUSIONS: Our data substantially contributes to the understanding of the function of ATP synthase genes in cotton CMS. Therefore, we suggest that ATP synthase genes might be an indirect cause of cotton CMS. Further research is needed to investigate the relationship among ATP synthase genes in cotton CMS.


Subject(s)
Cell Membrane/genetics , RNA Editing , Adenosine Triphosphatases/genetics , Gossypium/enzymology , Plant Infertility/genetics , DNA, Mitochondrial/genetics , Polymerase Chain Reaction , Gene Expression Regulation, Plant/genetics , Gossypium/genetics , Cytoplasm/metabolism , RNA, Mitochondrial/genetics
4.
Genet Mol Res ; 16(3)2017 Sep 21.
Article in English | MEDLINE | ID: mdl-28973745

ABSTRACT

The objective of this study was the identification of the cytoplasmic types and the genotyping for the fertility restoration nuclear locus (Ms) in 59 onion accessions, aiming at the selection of 'A' and 'B' lines essential for the obtainment of hybrids. Three markers were used to identify the cytoplasm 5' cob, orfA501, and orf725, and two were used for the Ms locus (AcSKP1 and AcPMS1). The two types of male-sterile cytoplasm ('S' and 'T'), as well as fertile cytoplasm ('N'), and the Ms and ms alleles in both homozygosity and heterozygosity were detected in the 59 genotypes evaluated in the experiment. The frequencies of the 5' cob/orfA501 and orf725 markers, as well as of the markers AcSKP1 and AcPMS1, were close in the onion accessions evaluated in this study. In the Brazilian germplasm, the frequencies of the 'N', 'S', and 'T' cytoplasm were approximately 0.47, 0.28, and 0.25, respectively, whereas the allele frequencies of Ms and ms were 0.52 and 0.48, respectively. The accessions Régia, EHCEB 20146, EHCEB 201427, Alvorada, Serrana, Crioula Mercosul, EHCEB 20142, BRS 367, Rainha, Juporanga, and Alfa SF C-XI have potential for the identification of 'A' and 'B' lines, since they presented mixtures of cytoplasm and different allele frequencies for Ms. All the plants of the accessions EHCEB 20142040/EHCEB 20141040, EHCEB 20142028/EHCEB 20141028, and EHCEB 20112006/EHCEB 20111006 were in the Nmsms and Smsms conditions, and have the potential for 'B' and 'A' lines, respectively, for the CMS-S system. All the plants of the accessions EHCEB 20142027/EHCEB 20141027, EHCEB 20102019/EHCEB 20101019, and Alfa SF 'B'/Alfa SF 'A' were in Nmsms and Tmsms conditions, and have the potential for 'B' and 'A' lines, respectively, for the CMS-T system.


Subject(s)
Cytoplasm/genetics , Genes, Plant , Onions/genetics , Plant Infertility/genetics , Genetic Loci , Onions/physiology
5.
Genet Mol Res ; 16(1)2017 Feb 23.
Article in English | MEDLINE | ID: mdl-28252171

ABSTRACT

Cytoplasmic male sterility (CMS) in pepper is a better way to produce hybrid seeds compared to manual production. We used the two sequence characterized amplified region (SCAR) markers (CRF-SCAR and CMS-SCAR130) in CMS pepper, to identify the genotype. We assembled two CMS yellow bud mutants (YBM; YBM12-A and YBM12-B). This mutation in leaf color is controlled by a single dominant nuclear gene. The aim was to create a new hybrid seed production method that reduces the costs and increases F1 hybrid seed purity. The results suggest that the CRF-SCAR and CMS-SCAR130 markers can be used together in multiple generations to screen for restorer or maintainer genes. We found the marker linked to the restorer gene (Rf) in the C-line and F1 hybrids, as well as partially in the F2 generation, whereas it was not found in the sterile YBM12-A or the maintainer line YBM12-B. In the F2 population, sterility and fertility segregated at a 3:1 ratio based on the CRF-SCAR marker. A 130 bp fragment was produced in the YBM12-A, F1, and F2 populations, suggesting that these lines contained sterile cytoplasm. A 140 bp fragment present in the YBM12-B and C-line indicated that these lines contained normal cytoplasm. In addition, we identified some morphological characters distinguishing sterile and fertile buds and flowers that may be linked to the sterility gene. If more restorer lines are identified, CMS expressing the YBM trait can be used in hybrid seed production.


Subject(s)
Capsicum/genetics , Genes, Plant/genetics , Genetic Markers/genetics , Mutation , Plant Infertility/genetics , Cytoplasm/genetics , Fertility/genetics , Flowers/genetics , Genotype , Hybridization, Genetic , Meristem/genetics , Phenotype , Plant Breeding/methods , Reproducibility of Results , Seeds/genetics
6.
Genet Mol Res ; 15(3)2016 Aug 29.
Article in English | MEDLINE | ID: mdl-27706643

ABSTRACT

Molecular markers can increase both the efficiency and speed of breeding programs. Functional markers that detect the functional mutations causing phenotypic changes offer a precise method for genetic identification. In this study, we used newly derived cleaved amplified polymorphic sequence markers to detect the functional mutations of tms5, which is a male sterile gene that is widely used in rice production in China. In addition, restriction cutting sites were designed to specifically digest amplicons of tms5 but not wild type (TMS5), in order to avoid the risk of false positive results. By optimizing the condition of the polymerase chain reaction amplifications and restriction enzyme digestions, the newly designed markers could accurately distinguish between tms5 and TMS5. These markers can be applied in marker-assisted selection for breeding novel thermo-sensitive genic male sterile (TGMS) lines, as well as to rapidly identify the TGMS hybrid seed purity.


Subject(s)
Chimera/genetics , Genes, Plant , Genetic Markers , Oryza/genetics , Plant Breeding , Plant Infertility/genetics , Chromosome Mapping , Crosses, Genetic , DNA Primers/chemical synthesis , DNA Restriction Enzymes/genetics , Nucleic Acid Amplification Techniques , Seeds/genetics
7.
Genet Mol Res ; 15(2)2016 Jul 14.
Article in English | MEDLINE | ID: mdl-27421020

ABSTRACT

Heterosis, or enhancement through outbreeding, is one of the most promising approaches for increasing crop yield. Male sterility (MS), which promotes heterosis, has been widely applied in hybrid crop production. Medicago truncatula is a model legume species and is closely related to M. sativa, an important legume forage plant. Although the molecular mechanisms of MS in M. truncatula and M. sativa remain unclear, several studies of MS have been conducted in Arabidopsis thaliana. Previous research has shown that MS is associated with the destruction of tapetal cell layers. Disruption of tapetum developmental processes may result in pollen abortion. In an effort to identify genes useful for breeding in M. sativa, we identified MS related genes in M. truncatula using BLAST and homology to A. thaliana genes. In this study, we identified 63 tapetum specific male sterility (TSMS) related genes. The length of TSMS genes varied from 225 to 3747 bp. We identified 15 conserved domains and 8 cis-elements associated with TSMS related genes. Analysis of the phylogenetic relationships among these genes allowed them to be classified into three groups, MtTsms A, MtTsms B, and MtTsms C. Expression analyses revealed that these genes may be involved in developmental processes and response to abiotic stress.


Subject(s)
Medicago truncatula/genetics , Plant Infertility/genetics , Amino Acid Sequence , Arabidopsis/genetics , Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant , Hybrid Vigor/genetics , Medicago sativa/genetics , Phylogeny , Plant Proteins/biosynthesis , Plant Proteins/genetics
8.
Genet Mol Res ; 14(4): 12030-42, 2015 Oct 05.
Article in English | MEDLINE | ID: mdl-26505350

ABSTRACT

Although a number of studies have shown that chemical hybridizing agents (CHAs) affect anther growth and regulate cell-cycle progression, little is known about the molecular and cellular mechanisms involved. Proliferating cell nuclear antigen (PCNA) is an essential factor in DNA replication, and in many other processes in eukaryotic cells. In this study, the open reading frame of TaPCNA, the PCNA in wheat (Triticum aestivum L.), was cloned by reverse transcription polymerase chain reaction (RT-PCR). Sequence analysis revealed that this gene was 792-bp long and encoded a protein with 234 amino acids. Alignment of the TaPCNA-predicted sequence revealed a high degree of identity with PCNAs from other plant species. A subcellular localization assay indicated that TaPCNA was localized in the nucleus. The TaPCNA was cloned into the prokaryotic expression plasmid pET32a, and the recombinant plasmid was transformed into BL21 (DE3). TaPCNA expression was induced by 0.5 mM isopropyl-beta-D-thiogalactopyranoside and verified using sodium dodecyl sulfate polyacrylamide gel electrophoresis and western blot assays, which indicated that the fusion protein was successfully expressed. The gene involved in the G1-to-S transition, Histone H4, was downregulated by 1376- CIMS, which is a chemically induced male sterility line. However, a semi-quantitative RT-PCR revealed that TaPCNA expression was upregulated in 1376-CIMS. Our results suggest that CHAs (SQ-1) induce DNA damage in wheat anthers. DNA damage results in either the delay or arrest of cell-cycle progression, which affects anther development. This study will help to elucidate the mechanisms of SQ-1-induced male sterility.


Subject(s)
Plant Infertility/genetics , Proliferating Cell Nuclear Antigen/genetics , Triticum/genetics , Amino Acid Sequence , Cloning, Molecular , Molecular Sequence Data , Proliferating Cell Nuclear Antigen/chemistry , Proliferating Cell Nuclear Antigen/metabolism , Triticum/physiology
9.
Genet Mol Res ; 14(2): 3318-29, 2015 Apr 13.
Article in English | MEDLINE | ID: mdl-25966098

ABSTRACT

A novel genetic male sterile germplasm was developed by successively crossing of (C. annuum x C. chinense) x C. pubescens and by chemical mutagenesis in pepper. The sterile anthers showed morphological abnormalities, but pistils developed normally with fine pollination capability. We investigated fertility segregation through sib-crossing of the same strains and test crossing by male sterile plants with 6 advanced inbred lines. The results showed that male fertility in the pepper was dominant in the F1 generation and segregated at a rate of 3:1 in the F2 generation, suggesting that monogenic male sterility was recessive and conformed to Mendelian inheritance. Cyto-anatomy analysis revealed that microspore abortion of sterile anthers occurred during telophase in the microspore mother cell stage when tapetal cells showed excessive vacuolation, resulting in occupation of the loculi. The microspore mother cells self-destructed and autolyzed with the tapetum so that meiosis in pollen mother cells could not proceed past the tetrad stage.


Subject(s)
Capsicum/genetics , Plant Infertility/genetics , Pollen/cytology , Capsicum/cytology , Hybridization, Genetic , Mutagenesis , Pollen/genetics , Telophase
10.
Genet Mol Res ; 14(1): 574-84, 2015 Jan 26.
Article in English | MEDLINE | ID: mdl-25729993

ABSTRACT

In previous studies, we first isolated one different protein ß-1,3-glucanase using two-dimensional electrophoresis and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry from normal wheat (Triticum aestivum L.) and chemical hybridization agent-induced male sterility (CIMS) wheat. In this experiment, ß-1,3-glucanase activity and the expression of a callose deposition-related gene, UDP-glucose phosphorylase (UGPase), were determinate in normal, CIMS, and genetic male sterility (GS) wheat. ß-1,3-glucanase activity was significantly different between the fertile and sterile lines during callose synthesis and degradation, but there was no difference between CIMS and GS wheat. The UGPase gene of callose deposition was highly expressed in the meiophase and sharply decreased in the tetrad stage. However, the expression of the UGPase gene was significantly different between the fertile and sterile lines. These data indicated that ß-1,3-glucanase activity and the expression of the UGPase gene play important roles in the male sterility of wheat. Consequently, pollen mother cells (PMCs) might degenerate at the early meiosis stage, and differences in UGPase gene expression and ß-1,3-glucanase activity might eventually result in complete pollen collapse. In addition, the critical period of anther abortion might be the meiosis stage to the tetrad stage rather than what we previously thought, the mononuclear period.


Subject(s)
Gene Expression Regulation, Plant , Glucan 1,3-beta-Glucosidase/metabolism , Glucans/metabolism , Plant Infertility/genetics , Triticum/enzymology , Triticum/genetics , DNA, Complementary/genetics , Electrophoresis, Gel, Two-Dimensional , Gene Expression Regulation, Enzymologic , Genes, Plant , Nucleotidyltransferases/metabolism , Plant Proteins , Pollen/metabolism , Pollen/ultrastructure , RNA, Ribosomal, 18S/genetics , Triticum/ultrastructure
11.
Plant Physiol Biochem ; 83: 292-9, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25208507

ABSTRACT

The mature pollen grain displays a highly specialized function in angiosperms. Accordingly, the male gametophyte development involves many specific biological activities, making it a complex and unique process in plants. In order to accomplish this, during pollen development, a massive transcriptomic remodeling takes place, indicating the switch from a sporophytic to a gametophytic program and involving the expression of many pollen specific genes. Using microarray databases we selected genes showing pollen-specific accumulation of their mRNAs and confirmed this through RT-PCR. We selected five genes (POLLEN SPECIFIC GENE1-5) to investigate the pollen specificity of their expression. Transcriptional fusions between the putative promoters of these genes and the uidA reporter gene in Arabidopsis confirmed the pollen specific expression for at least two of these genes. The expression of the cytotoxin Barnase controlled by these promoters generated pollen specific ablation and male sterility. Through the selection of pollen specific genes from public datasets, we were able to identify promoter regions that confer pollen expression. The use of the cytotoxin Barnase allowed us to demonstrate its expression is exclusively limited to the pollen. These new promoters provide a powerful tool for the expression of genes exclusively in pollen.


Subject(s)
Arabidopsis , Gene Expression Profiling , Gene Expression Regulation, Plant , Plant Infertility/genetics , Pollen , Promoter Regions, Genetic , Arabidopsis/genetics , Arabidopsis/metabolism , Databases, Genetic , Oligonucleotide Array Sequence Analysis , Pollen/genetics , Pollen/metabolism
12.
Genet Mol Res ; 12(4): 5207-14, 2013 Oct 30.
Article in English | MEDLINE | ID: mdl-24301781

ABSTRACT

To produce a good F1 hybrid variety wheat crop, it is necessary to explore novel cytoplasmic male sterility (CMS) lines and their maintainer line. This study aimed to identify cytoplasmic variation in three isonuclear-alloplasmic male sterile lines Aegilops kotschyi (Ae.kots) -90-110, Aegilops ventricosa (Ae.ven) -90-110, and Triticum spelta (T.spelta) -90-110 and their maintainer line, A-90-110, at the molecular level. Mitochondrial DNA (mtDNA) was isolated using a combination of centrifugation and density gradient ultracentrifugation, sucrose sedimentation, lysis with sodium dodecyl sulfate (SDS), potassium proteinase, and phenol/chloroform extraction methods. To detect mtDNA purity, specific primers were designed for nuclear (ß-actin) and mitochondrial (COXIII) genes. Results indicated that the mtDNA was pure, and therefore suitable for polymerase chain reaction (PCR) and genetic analysis. Comparative analysis of mtDNA was conducted using amplified fragment length polymorphism (AFLP) markers. Reproducible polymorphisms were detected between the Aegilops and Triticum species and the male sterile lines. Four specific primers were screened from 64 AFLP marker primers, which provided the molecular basis for further studies investigating specific cytoplasmic male sterility characteristics.


Subject(s)
Amplified Fragment Length Polymorphism Analysis , DNA, Mitochondrial , Plant Infertility/genetics , Triticum/genetics , Cytoplasm , Triticum/classification
13.
Genet Mol Res ; 12(3): 2320-31, 2013 Jul 08.
Article in English | MEDLINE | ID: mdl-23315867

ABSTRACT

We studied the efficiency of maintaining and restoring cytoplasmic male sterility (CMS) systems in pepper (Capsicum annuum L.). An Rf-linked molecular marker was employed to analyze the interaction between 6 CMS lines (A), 5 maintainers (B), and 6 restorers (C). Sterility was maintained in the matings of lines 201A x 200B, 203A x 200B, 206A x 200B, 200A x 201B, 206A x 201B, 200A x 202B, 200A x 203B, 200A x 206B, and 201A x 206B. All 6 restorers restored the fertility of lines 200A, 202A, 203A, and 204A, except that 213C could not restore the fertility of lines 200A and 204A. However, the 6 restorers had diverse restoring abilities in individual CMS lines. The Rf-linked molecular marker was amplified by PCR in lines 207C, 208C, and 213C. This DNA marker was only found in the F1 hybrids M39, M14, M19, M25, M13, M20, and M22. We conclude that the restorers 208C and 207C can transmit the Rf gene or the Rf-linked marker to F1 hybrids.


Subject(s)
Capsicum/genetics , Cytoplasm/genetics , Genes, Plant/genetics , Plant Infertility/genetics , Crosses, Genetic , Genetic Markers
14.
Genet Mol Res ; 11(4): 3966-74, 2012 Nov 14.
Article in English | MEDLINE | ID: mdl-23212334

ABSTRACT

Embryo abortion in mango severely damages mango production worldwide. The mechanisms by which the mango embryos abort have long been an intriguing question. We used subtractive suppression hybridization to investigate the differentially expressed genes involved in this process. We generated 2 cDNA libraries from normal seed and aborted seed embryos of mango cultivar 'Jinhuang'. One thousand five hundred and seventy-two high-quality expressed sequence tags (ESTs) were obtained, with 1092 from the normal seed tester library and 480 from the aborted seed tester library. These ESTs were assembled into 783 unigenes, including 147 contigs and 636 singletons in contigs; 297 singletons in gene ontology (GO) indicated coverage of a broad range of GO categories. Seven candidate genes from different categories were selected for semi-quantitative PCR analysis, and their possible functions in embryo abortion are discussed. These data provide new insight into the genetic regulation of embryo abortion in mango and may aid in further identification of novel genes and their functions.


Subject(s)
Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant/genetics , Mangifera/embryology , Mangifera/genetics , Nucleic Acid Hybridization/methods , Seeds/genetics , Base Sequence , Expressed Sequence Tags , Molecular Sequence Annotation , Plant Infertility/genetics , Reverse Transcriptase Polymerase Chain Reaction
15.
Genet Mol Res ; 11(3): 3020-31, 2012 Aug 29.
Article in English | MEDLINE | ID: mdl-22653649

ABSTRACT

NADP-dependent isocitrate dehydrogenase (NADP-ICDH) is an important enzyme involved in energy metabolism. The complete coding sequence of the pepper (Capsicum annuum) NADP-ICDH gene was amplified using a reverse transcriptase PCR based on the conserved sequence information of the tomato and other Solanaceae plants and known highly homologous pepper ESTs. Nucleotide sequence analysis revealed that the pepper NADP-ICDH gene encodes a protein of 415 amino acids that has high homology with the proteins of seven species, Solanum tuberosum (100%), Citrus limon (98%), Daucus carota (98%), Nicotiana tabacum (98%), Vitis vinifera (99%), Arabidopsis thaliana (97%), and Oryza sativa (98%). Tissue expression analysis demonstrated that the pepper NADP-ICDH gene is over expressed in flower, pericarp and seed, moderately in placenta, weakly in stem and leaf, hardly expressed in root. At the abortion stages, activities and expression levels of NADP-ICDH in anthers of a sterile line were strongly reduced, while those in an F(1) hybrid remained normal. Activities and expression levels of NADP-ICDH were too low to maintain balanced energy metabolism in the sterile line, which indicated that stable transcripts of NADP-ICDH are necessary to maintain energy metabolism at a normal level. When the restorer gene was transferred to the cytoplasmic male sterile line, activities and expression level of NADP-ICDH were regulated by the restorer gene and became stable. The restorer gene likely plays an important role in keeping the balance of the energy metabolism within normal levels during microspore development.


Subject(s)
Capsicum/enzymology , Capsicum/genetics , Genes, Plant/genetics , Isocitrate Dehydrogenase/genetics , Plant Infertility/genetics , Sequence Analysis, DNA , Amino Acid Sequence , Base Sequence , Cloning, Molecular , DNA, Complementary/genetics , Evolution, Molecular , Gene Expression Profiling , Gene Expression Regulation, Plant , Isocitrate Dehydrogenase/chemistry , Isocitrate Dehydrogenase/metabolism , Models, Molecular , Molecular Sequence Data , Organ Specificity/genetics , Phylogeny , Protein Structure, Secondary , Protein Structure, Tertiary , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Structural Homology, Protein
16.
Plant Biol (Stuttg) ; 14(1): 223-33, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22132826

ABSTRACT

Wild potato species are widely distributed in the Americas, where they spontaneously grow in very diverse habitats. These species - with low chromosome differentiation - form polyploid series with 2n = 2x, 3x, 4x and 6x (x =12). They are isolated in nature by external and internal hybridisation barriers that can be incomplete, allowing hybridisation in areas of sympatry. Nevertheless, most accessions in germplasm banks, regardless of genetic background of the sampled spontaneous populations, have been assigned specific categories based on morphological characters. To further investigate the extent of hybridisation in the group and for comparative purposes, pollen viability was estimated in (i) artificial hybrids between a commercial cultivar (Calén INTA) of the common potato (tetraploid Solanum tuberosum ssp. tuberosum) and the tetraploid cytotype of the related wild species S. gourlayi, and (ii) samples of plants (accessions) and inflorescences of natural populations from Argentina, tentatively classified as 'presumed hybrids' (S. infundibuliforme-S. gourlayi) and 'species' (S. infundibuliforme, S. gourlayi and S. chacoense). Regardless of origin, 98 out of 103 plants analysed had zero to 70% pollen viability (zero to 40% in eight of them). Pollen grains were of variable size and morphology and, in mostly male sterile plants, the only viable pollen grains were 2n and/or 4n. Furthermore, male sterile plants shared various abnormalities in meiosis I and II (unpaired chromosomes, unequal chromosome distribution, precocious/lagging chromosomes, parallel, tripolar, fused and multiple spindles, unequal size nuclei, dyads, triads and pentads in addition to normal tetrads, among others). These results provide novel evidence to support field observations of early potato botanists on the extent of spontaneous hybridisation in wild Argentinian potato populations, which is not reflected in the current taxonomy and has significant consequences for germplasm conservation and breeding.


Subject(s)
Meiosis/physiology , Plant Infertility/genetics , Pollen/genetics , Solanum tuberosum/genetics , Argentina , Hybridization, Genetic , Inflorescence/genetics , Plants, Genetically Modified , Ploidies , Pollen/cytology , Pollen/growth & development , Pollen/ultrastructure , Solanum/genetics , Solanum tuberosum/cytology , Solanum tuberosum/growth & development , Solanum tuberosum/ultrastructure
17.
Genet Mol Res ; 10(4): 4073-83, 2011 Dec 05.
Article in English | MEDLINE | ID: mdl-22180076

ABSTRACT

To better understand the molecular mechanisms of multiple-allele-inherited male sterility in Chinese cabbage (Brassica rapa ssp pekinensis), differentially expressed genes in fertile and sterile plants must be isolated. We used cDNA-AFLP analysis to isolate differentially expressed genes in fertile and sterile buds of the two-type line, AB01. Sixteen high-quality sequences were generated, 11 of which were up-regulated in fertile buds, and five of which were up-regulated in sterile buds. Based on BLAST screening and functional annotation, these genes have homology with genes encoding known flower- or bud-specific proteins, metabolism-related proteins and cell-structure proteins. In addition, the full-length cDNA sequences of the actin gene were cloned from the cabbage plants by RACE and used as an internal standard for semi-quantitative reverse transcription-PCR. Expression of three flower- or bud-specific differentially expressed transcript-derived fragments in fertile and sterile buds was examined using RT-PCR; the expression patterns of these genes were similar to the patterns observed in the cDNA-AFLP analysis.


Subject(s)
Alleles , Brassica rapa/genetics , DNA, Complementary/chemistry , Plant Infertility/genetics , Actins/genetics , Actins/metabolism , Amplified Fragment Length Polymorphism Analysis , Brassica rapa/growth & development , DNA, Complementary/metabolism , Genes, Plant , Molecular Sequence Annotation , Plant Proteins/genetics , Plant Proteins/metabolism , Species Specificity , Transcriptome
18.
Genet Mol Res ; 10(4): 3435-45, 2011 Oct 31.
Article in English | MEDLINE | ID: mdl-22057998

ABSTRACT

Pollen sterility is one of the main hindrances against the utilization of strong intersubspecific (indica-japonica) heterosis in rice. We looked for neutral alleles at known pollen sterility loci Sd and Se that could overcome this pollen sterility characteristic. Taichung 65, a typical japonica cultivar, and its near isogenic lines E7 and E8 for pollen sterility loci Sd and Se were employed as tester lines for crossing with 13 accessions of wild rice (O. rufipogon). Pollen fertility and genotypic segregations of the molecular markers tightly linked with Sd and Se loci were analyzed in the paired F(1)s and F(2) populations. One accession of wild rice (GZW054) had high pollen fertility in the paired F(1)s between Taichung 65 and E7 or E8. Genotypic segregations of the molecular markers tightly linked with Sd and Se loci fit the expected Mendelian ratio (1:2:1), and non-significances were shown among the mean pollen fertilities with the maternal, parental, and heterozygous genotypes of each molecular markers tightly linked with Sd and Se loci. Evidentially, it indicated that the alleles of Sd and Se loci for GZW054 did not interact with those of Taichung 65 and its near isogenic lines, and, thus were identified as neutral alleles Sd(n) and Se(n). These neutral genes could become important germplasm resources for overcoming pollen sterility in indica-japonica hybrids, making utilization of strong heterosis in such hybrids viable.


Subject(s)
Agriculture , Crosses, Genetic , Genes, Plant/genetics , Genetic Loci/genetics , Oryza/genetics , Plant Infertility/genetics , Pollen/genetics , Genetic Markers , Genetics, Population , Genotype , Oryza/growth & development , Selection, Genetic
19.
Genet Mol Res ; 10(3): 1958-62, 2011 Sep 09.
Article in English | MEDLINE | ID: mdl-21948758

ABSTRACT

Cytological analysis under light microscopy of the single hybrid P30R50 of silage corn revealed an abnormal pattern of microsporogenesis that affected the meiotic products. Meiosis progressed normally until diakinesis, but before migration to the metaphase plate, bivalents underwent total desynapsis and 20 univalent chromosomes were scattered in the cytoplasm. At this stage, meiocytes also exhibited a number of chromatin-like fragments scattered throughout the cell. Metaphase I was completely abnormal in the affected cells, and univalent chromosomes and fragments were distributed among several curved spindles. Anaphase I did not occur, and each chromosome or group of chromosomes originated a micronucleus. After this phase, an irregular cytokinesis occurred, and secondary meiocytes with several micronuclei were observed. Metaphase II and anaphase II also did not occur, and after the second cytokinesis, the genomes were fractionated into polyads, generating several unbalanced microspores, with various-sized nuclei. About 35% of the tetrads were abnormal in the hybrid. This spontaneous mutation had been previously reported in a USA maize line called ms17 and was found to cause male sterility.


Subject(s)
Cell Cycle Checkpoints , Meiosis/genetics , Plant Infertility/genetics , Plant Infertility/physiology , Zea mays/genetics , Cell Cycle , Chromosomes, Plant , Cytokinesis , DNA, Plant/genetics , Gametogenesis, Plant , Genome, Plant , Mutation , Silage , Zea mays/cytology
20.
Plant Mol Biol ; 70(4): 471-85, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19326245

ABSTRACT

Plant mitochondria include gamma-type carbonic anhydrases (gammaCAs) of unknown function. In Arabidopsis, the gammaCAs form a gene family of five members which all are attached to the NADH dehydrogenase complex (complex I) of the respiratory chain. Here we report a functional analysis of gamma carbonic anhydrase 2 (CA2). The gene encoding CA2 is constitutively expressed in all plant organs investigated but it is ten fold induced in flowers, particularly in tapetal tissue. Ectopic expression of CA2 in Arabidopsis causes male sterility in transgenic plants. In normal anther development, secondary thickenings of the endothecial cell wall cause anthers to open upon dehydration. Histological analyses revealed that abnormal secondary thickening prevents anther opening in 35S::CA2 transgenic plants. CA2 abundance in transgenic plants is increased 2-3 fold compared to wild-type plants as revealed by Western blotting analyses. Moreover, abundance of other members of the CA family, termed CA3 and CAL2, is increased in transgenic plants. Oxygen uptake measurements revealed that respiration in transgenic plants is mainly based on NADH reduction by the alternative NADH dehydrogenases present in plant mitochondria. Furthermore, the formation of reactive oxygen species (ROS) is very low in transgenic plants. We propose that reduction in ROS inhibits H(2)O(2) dependent lignin polymerization in CA2 over-expressing plants, thereby causing male sterility.


Subject(s)
Arabidopsis Proteins/genetics , Carbonic Anhydrases/genetics , Flowers/genetics , Mitochondrial Proteins/genetics , Plant Infertility/genetics , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Ascorbic Acid/metabolism , Blotting, Western , Carbonic Anhydrases/metabolism , Electrophoresis, Polyacrylamide Gel , Flowers/growth & development , Flowers/metabolism , Gene Expression Profiling , Gene Expression Regulation, Developmental , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Genotype , Hydrogen Peroxide/metabolism , In Situ Hybridization , Lignin/metabolism , Mitochondria/enzymology , Mitochondria/metabolism , Mitochondrial Proteins/metabolism , Oxygen Consumption , Phenotype , Plants, Genetically Modified , Reactive Oxygen Species/metabolism , Reverse Transcriptase Polymerase Chain Reaction
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